Citrus Sinensis ID: 019749

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccHHccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccEEEccHHHccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccHEEEEEEEccc
Coil and Loop (DISEMBL)
mrsltlpwsglkahslpssasypkaskscgsklfpfnslcknqtstskklslrnpylnfsrdpgascenrndvdcknckmtRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFasglqsfpflgdlgdiSRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRtfhyvdeilpfrfgqtdlpiddIAAVCLLVYFGVSTLldaastdglksedeQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAassplgviGGALAGHVVATLLAVLGGSLLGTFLSEKVysnfnlsh
Flexible Loop (DISEMBL)
mrsltlpwsglkahslpssasypKASKSCGSKLFPFNSLCKNQTstskklslrnpylnfsrdpgascenrndVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Low Complexity Region (SEG)
MRSLTLPWSGLKAHslpssasypkasksCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIaallaarnsaaTVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNgagiiaaastiistFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Disordered region (IsUnstruct)
************************************************************************VDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA*********************FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNF****
Disordered Region (DISOPRED)
*************************************************************************************************************************************ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAST******************FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS*
Disordered Region (DISEMBL)
MRSLTLPWSGLKAHS*************CGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAS**************LAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Disordered Region (DISPRO)
*********GLKAHSLPSSASYPKASKSCGSKLFPFNSLCKN**S*SKKLSLRNPYLNFSRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDG*********************AGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	336	2.2.26 [Sep-21-2011]
Q94AX5	370	GDT1-like protein 1, chlo	yes	no	0.821	0.745	0.67	8e-92
B8AAM2	341	GDT1-like protein 1, chlo	N/A	no	0.663	0.653	0.761	1e-85
Q5NAY7	341	GDT1-like protein 1, chlo	yes	no	0.663	0.653	0.756	1e-85
Q9T0H9	359	GDT1-like protein 2, chlo	no	no	0.550	0.515	0.447	3e-38
Q2R2Z4	347	GDT1-like protein 2, chlo	no	no	0.550	0.533	0.47	6e-38
P52876	206	GDT1-like protein sll0615	N/A	no	0.532	0.868	0.384	4e-27
Q9HC07	324	Transmembrane protein 165	yes	no	0.541	0.561	0.342	9e-21
Q93Y38	293	GDT1-like protein 3 OS=Ar	no	no	0.529	0.607	0.365	3e-20
Q10320	287	GDT1-like protein C17G8.0	yes	no	0.535	0.627	0.324	3e-19
Q2R4J1	279	GDT1-like protein 3 OS=Or	no	no	0.514	0.620	0.363	7e-19

>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=At1g64150 PE=2 SV=2

 Score =  337 bits (864), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 201/300 (67%), Positives = 221/300 (73%), Gaps = 24/300 (8%)

Query: 51  SLRNPYL---------NFSRDPGASCENRNDVDC-----------KNCKMTRES--VHNL 88
           S+RN Y          N S+  G  C  RND  C           +N  +  ES   H+ 
Sbjct: 49  SVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLDVLVESSIAHSR 108

Query: 89  ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFF 147
                ++ F+   G + L G+  A AA    +  QS     GDLGDIS GFASAFLLIFF
Sbjct: 109 REIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFF 168

Query: 148 SELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTD 207
           SELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVDE+LPFRFG TD
Sbjct: 169 SELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTD 228

Query: 208 LPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTII 267
           LPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNGAGI+AAA+TII
Sbjct: 229 LPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTII 287

Query: 268 STFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 327
           STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLLG FLSEK
Sbjct: 288 STFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEK 347

Arabidopsis thaliana (taxid: 3702)

>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 172/226 (76%), Positives = 193/226 (85%), Gaps = 3/226 (1%)

Query: 103 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 162
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 163 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 222
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 223 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 282
           GV+TLLDAAS D  K  +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GVTTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272

Query: 283 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
           FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0221700 PE=3 SV=2

 Score =  316 bits (810), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/226 (75%), Positives = 193/226 (85%), Gaps = 3/226 (1%)

Query: 103 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 162
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 163 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 222
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 223 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 282
           G++TLLDAAS D  K  +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GITTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272

Query: 283 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
           FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 130/201 (64%), Gaps = 16/201 (7%)

Query: 137 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 196
           GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL+ MT++SV++G+ F  V 
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query: 197 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSED---------EQKEAEL 247
              P +F QT LPI + AA+ LL++FG+ ++ DA     +++++         E  EAE 
Sbjct: 204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEE 259

Query: 248 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 307
            V E +     +      +  +F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH+
Sbjct: 260 LVKEKASKK--LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317

Query: 308 VATLLAVLGGSLLGTFLSEKV 328
           VAT+LA++GG+ L  ++SEK+
Sbjct: 318 VATVLAIMGGAFLANYISEKL 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1

 Score =  158 bits (399), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 123/200 (61%), Gaps = 15/200 (7%)

Query: 137 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 196
           GF +AF LIF SE+GDKTFFIAALLA +   A V  G+  AL+ MT++SVI+GR F  V 
Sbjct: 134 GFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSV- 192

Query: 197 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--------ASTDGLKSEDEQKEAELA 248
              P +F QT LPI + AA+ LL +FG  ++ DA         +  G     E  EAE  
Sbjct: 193 ---PAQF-QTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESGELAEAEEL 248

Query: 249 VSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVV 308
           V E       + +    +  +F+LVF AEWGD+S  +TIAL AA SP GV  GA+AGH+V
Sbjct: 249 VKEKVAKK--LTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLV 306

Query: 309 ATLLAVLGGSLLGTFLSEKV 328
           AT LA++GG+ L  +LSEK+
Sbjct: 307 ATFLAIVGGAFLANYLSEKL 326

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 11/190 (5%)

Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
           F +  LLI  SELGDKTFFIA +LA R     V  G  G LAAMT++SV++G+ F +   
Sbjct: 5   FTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTF--- 61

Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 257
            LP R+        + A V L + FG   L DA       + +E ++AE A++       
Sbjct: 62  -LPTRY-------INYAEVALFLIFGTKLLWDARRIKATANLEEMEDAEKAIASGEKKLK 113

Query: 258 GIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 317
            +      ++ +F L FVAEWGD++  +TIALAA+++  GV  GA+ GH +  ++AV+GG
Sbjct: 114 IVPRGWGIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGG 173

Query: 318 SLLGTFLSEK 327
             +   +SEK
Sbjct: 174 KFVAGRISEK 183

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 104/216 (48%), Gaps = 34/216 (15%)

Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
           F +A  +I  SELGDKTFFIAA++A R +  TV AG   AL  MT +SV+ G    Y   
Sbjct: 97  FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG----YATT 152

Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDGLKSEDEQKEAELAV--SEFS 253
           ++P  +           +  L   FG+  L +    S D  + E E+ +AEL     EF 
Sbjct: 153 VIPRVYTY-------YVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQ 205

Query: 254 G----NGAGIIAAASTI---------------ISTFTLVFVAEWGDKSFFSTIALAAASS 294
                NG G +   ++I               +   TL F+AEWGD+S  +TI LAA   
Sbjct: 206 RTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 265

Query: 295 PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYS 330
           P GV  G   GH + T LAV+GG ++   +S +  +
Sbjct: 266 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 301

Homo sapiens (taxid: 9606)

>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 16/194 (8%)

Query: 140 SAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEIL 199
           S+F +I  +E+GD+TF IAAL+A R+  ATV +G   AL  MT++S  LGR       I+
Sbjct: 87  SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 139

Query: 200 PFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGI 259
           P    +      + AA  L  +FG+  L  A  +   KS  +++  E+     SG G   
Sbjct: 140 PNLISRKH---TNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 196

Query: 260 IA------AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 313
                        + +F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct: 197 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 256

Query: 314 VLGGSLLGTFLSEK 327
           V+GGS+L + +S++
Sbjct: 257 VVGGSMLASRISQR 270

Arabidopsis thaliana (taxid: 3702)

>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 105/225 (46%), Gaps = 45/225 (20%)

Query: 133 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 192
           D  R    +  +IF  E+GDKTF +AALLA  NS  TVFAG++ AL  MT++ V+LG   
Sbjct: 45  DFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG--- 101

Query: 193 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA----STDGLKSEDEQKEAELA 248
           H    + P +       + DI    L V FG+  L++A     S + +  E +    E+A
Sbjct: 102 HAAPLLFPRK-------LTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIA 154

Query: 249 -----------------------------VSEFSGNGAGIIAA--ASTIISTFTLVFVAE 277
                                        +S+    G  ++A   +   I  F L FV+E
Sbjct: 155 ANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSE 214

Query: 278 WGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGT 322
           WGD+S  +TIA+AA+ +  GV  GA  GH   T LAV+ G  + T
Sbjct: 215 WGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYIST 259

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 17/190 (8%)

Query: 144 LIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRF 203
           +I  SE+GD+TF IAAL+A R+  + V +G   AL  MTV+S  LGR       I+P   
Sbjct: 78  MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGR-------IVPNLI 130

Query: 204 GQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIA-- 261
            +      + AA  L ++FG+  L  A  +D  K   +++  E+     SG G   +   
Sbjct: 131 SRKH---TNSAATVLYLFFGLRLLYIAWKSDP-KGSQKKEMEEVEEKLESGQGKSTLRRF 186

Query: 262 ----AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 317
                    +  F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LAV+GG
Sbjct: 187 FGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSLAVIGG 246

Query: 318 SLLGTFLSEK 327
           S+L + +S++
Sbjct: 247 SMLASKISQR 256

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
255537647	375	Transmembrane protein TPARL, putative [R	0.892	0.8	0.627	1e-109
297742269	393	unnamed protein product [Vitis vinifera]	0.961	0.821	0.632	1e-106
449452426	342	PREDICTED: GDT1-like protein 1, chloropl	0.875	0.859	0.647	1e-106
225426088	260	PREDICTED: GDT1-like protein 1, chloropl	0.702	0.907	0.851	1e-99
359806660	347	uncharacterized protein LOC100809618 [Gl	0.788	0.763	0.707	4e-98
357481519	403	Transmembrane protein [Medicago truncatu	0.883	0.736	0.646	8e-95
356540420	321	PREDICTED: LOW QUALITY PROTEIN: GDT1-lik	0.708	0.741	0.757	5e-92
297836959	368	predicted protein [Arabidopsis lyrata su	0.821	0.75	0.673	7e-91
15010676	370	At1g64150/F22C12_10 [Arabidopsis thalian	0.860	0.781	0.657	3e-90
18407980	370	uncharacterized protein [Arabidopsis tha	0.821	0.745	0.67	5e-90

>gi|255537647|ref|XP_002509890.1| Transmembrane protein TPARL, putative [Ricinus communis] gi|223549789|gb|EEF51277.1| Transmembrane protein TPARL, putative [Ricinus communis]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/360 (62%), Positives = 251/360 (69%), Gaps = 60/360 (16%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFS 60
           MRS+TL  S L+    P   S           L P NS  K ++S   KLS RNP L FS
Sbjct: 1   MRSITLSESALRLPPCPKPVS-----------LLPLNSFSKKRSS---KLSFRNPCLTFS 46

Query: 61  RDPGASCE--------------NRN-------DVDCKNCKMTRES--------------- 84
           R     CE              ++N        +DC+N + +RES               
Sbjct: 47  RYSRQWCEYSIQEAFRHFLPMVSKNFNGLEVRGLDCQNFQASRESMPVLDDICFLDKLST 106

Query: 85  -VHNLANDS---------GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDI 134
            V ++  D          GL+KF++  G LT QGSQ A A  D A G QS P+LGDLGDI
Sbjct: 107 KVKSIKEDEVAASTTSYGGLLKFMLLVGYLTFQGSQQAFAGTDIAVGSQSIPYLGDLGDI 166

Query: 135 SRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHY 194
           S GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGALA MT+ISV+LGRTFHY
Sbjct: 167 STGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAVMTIISVVLGRTFHY 226

Query: 195 VDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSG 254
           VDEILPFR G+TDLP+DDIAAVCLLVYFGVSTL+DA+S DGLK+EDEQKEAELAVSEFSG
Sbjct: 227 VDEILPFRLGETDLPVDDIAAVCLLVYFGVSTLIDASSGDGLKAEDEQKEAELAVSEFSG 286

Query: 255 NGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAV 314
           NGAGI+AAASTIISTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATL+AV
Sbjct: 287 NGAGILAAASTIISTFVLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLIAV 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742269|emb|CBI34418.3| unnamed protein product [Vitis vinifera]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/376 (63%), Positives = 269/376 (71%), Gaps = 53/376 (14%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYL--- 57
           MR++TL  S L+ HSL S    PK  K   S LF  NS  K   S   KLS + P L   
Sbjct: 1   MRTITLSESVLRTHSLHSPC--PKPPKFFSSYLFSLNSRVKEHNS---KLSHQYPRLVFS 55

Query: 58  NFSRDPGA-SC------------ENRNDVD---CKNCKMTRESVHNL------------- 88
            FSR  G  +C            EN + ++   C N K +++ +HN+             
Sbjct: 56  RFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKI 115

Query: 89  ----------------ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLG 132
                            +  GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLG
Sbjct: 116 NYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLG 175

Query: 133 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 192
           DIS GF SAFLLIFFSELGDKTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTF
Sbjct: 176 DISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTF 235

Query: 193 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEF 252
           HYVDEILPFRFG+TDLPIDDIAAVCLLVYFGVSTLL+A S++GLK+E+EQKEAE+AVSEF
Sbjct: 236 HYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEF 295

Query: 253 SGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLL 312
           SGNGAGI+++AST+ISTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATLL
Sbjct: 296 SGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLL 355

Query: 313 AVLGGSLLGTFLSEKV 328
           AVLGGSLLGTFLSEKV
Sbjct: 356 AVLGGSLLGTFLSEKV 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452426|ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial [Cucumis sativus]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/321 (64%), Positives = 245/321 (76%), Gaps = 27/321 (8%)

Query: 34  FPFNSLCKNQTSTS---KKLSLRNPYLNFSRDPGASCENRNDVDCK------NCKMTRES 84
           + F+S C+  T+     +K  + + Y +  ++P     +  +V  +      NC+   + 
Sbjct: 1   YRFSSCCRTATTKPWYWRKTEVVSKYYD-HQEPCHHDYSSREVSTRSITILDNCRAPEKP 59

Query: 85  VHNLANDSGL-----------------IKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPF 127
           +   ++  G+                 +KF++  G   LQ SQ A+A  D A+GLQS P 
Sbjct: 60  LAKYSSAEGIHENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPL 119

Query: 128 LGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVI 187
           LGDLGDIS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL AMT+ISV+
Sbjct: 120 LGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVV 179

Query: 188 LGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAEL 247
           LGRTFHYVDEILPFR G +DLP+DDIAAVCLLVYFGV+TLLDA+S+DGLK+EDEQKEAEL
Sbjct: 180 LGRTFHYVDEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAEL 239

Query: 248 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 307
           AVS+FSGNGAGI+AAAST++STF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH 
Sbjct: 240 AVSKFSGNGAGILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHG 299

Query: 308 VATLLAVLGGSLLGTFLSEKV 328
           VATLLAVLGGSLLGTFLSEK+
Sbjct: 300 VATLLAVLGGSLLGTFLSEKI 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426088|ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 201/236 (85%), Positives = 218/236 (92%)

Query: 93  GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGD 152
           GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLGDIS GF SAFLLIFFSELGD
Sbjct: 3   GLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGD 62

Query: 153 KTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDD 212
           KTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTFHYVDEILPFRFG+TDLPIDD
Sbjct: 63  KTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDD 122

Query: 213 IAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTL 272
           IAAVCLLVYFGVSTLL+A S++GLK+E+EQKEAE+AVSEFSGNGAGI+++AST+ISTF L
Sbjct: 123 IAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLL 182

Query: 273 VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
           VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATLLAVLGGSLLGTFLSEKV
Sbjct: 183 VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKV 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806660|ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max] gi|255636411|gb|ACU18544.1| unknown [Glycine max]

 Score =  364 bits (934), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 201/284 (70%), Positives = 227/284 (79%), Gaps = 19/284 (6%)

Query: 58  NFSRDPGASCENRND-----VDCKNCK--MTR---ESVHNLANDSG--LIKFVMFFGLLT 105
           N ++ P    +N N+         NCK  + R    S H  + +S   L+  ++ F  LT
Sbjct: 48  NETKFPTQPYKNSNNSSQSLAHISNCKFPLARPLVSSSHPASTNSSTKLLNSMLLFAFLT 107

Query: 106 LQGSQTAVAAV-DFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAAR 164
           LQ S  A+AA  DF++        GD+GD+S GFASAFLLIFFSELGDKTFFIAALLAAR
Sbjct: 108 LQPSYPALAASSDFST------IFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAAR 161

Query: 165 NSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGV 224
           NSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRFG+TDLPIDDIAAVCLLVYFGV
Sbjct: 162 NSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGV 221

Query: 225 STLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFF 284
           STLLDA+S+DG KS++EQKEAELAVSEFSGNGAGI++AAST+ STF LVFVAEWGDKSFF
Sbjct: 222 STLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAASTVASTFLLVFVAEWGDKSFF 281

Query: 285 STIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
           STIALAAASSPLGVI GALAGH VATLLAVLGGSLLGT+LSEKV
Sbjct: 282 STIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKV 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481519|ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] gi|355512380|gb|AES94003.1| Transmembrane protein [Medicago truncatula]

 Score =  353 bits (905), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 205/317 (64%), Positives = 242/317 (76%), Gaps = 20/317 (6%)

Query: 15  SLPSSASYPKASKSCGSKL---FPFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRN 71
           SL SS+ +P  +  C  KL   F F ++ ++ T           ++  S D   + EN +
Sbjct: 82  SLISSSIFPPPTPRCNLKLPPRFQFTNIFRSTTG----------FVRASEDDSVA-ENSD 130

Query: 72  DVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDL 131
                 C++  ++V +      ++KF++F     LQ +  AVAA DFA+GL S P  GD+
Sbjct: 131 ----SQCQLATQNVSSDDASMTVLKFMLFSAFFALQDAFPAVAASDFATGLNSIPIFGDV 186

Query: 132 GDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRT 191
           GD+S GFASAFLLIFFSELGDKTFFIAALLAARNSA+ VF GTFGALAAMTVISV LGRT
Sbjct: 187 GDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALGRT 246

Query: 192 FHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSE 251
           FHYVDE+LPFRFG+TDLPIDDIAAVCLLVYFGVSTLLDA+S+D  KS+DEQKEAELAVS+
Sbjct: 247 FHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAVSD 306

Query: 252 FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATL 311
           FSG+GAGI+AAASTI+STF LVFVAEWGDKSFFSTI    +SSPLGVI G+LAGH VATL
Sbjct: 307 FSGDGAGILAAASTIVSTFLLVFVAEWGDKSFFSTI--GESSSPLGVIAGSLAGHGVATL 364

Query: 312 LAVLGGSLLGTFLSEKV 328
           +AVLGGSLLGTFLSEKV
Sbjct: 365 IAVLGGSLLGTFLSEKV 381

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540420|ref|XP_003538687.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 1, chloroplastic-like, partial [Glycine max]

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 187/247 (75%), Positives = 210/247 (85%), Gaps = 9/247 (3%)

Query: 84  SVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFL 143
           ++ NL+    L+ F++ FG LTLQ S  A+A+    S +      GD+GD+S GFASAFL
Sbjct: 60  AITNLSTK--LLNFMLLFGFLTLQDSYPALASSSDISTI-----FGDIGDLSTGFASAFL 112

Query: 144 LIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRF 203
           LIFFSELGDKTFFIAALLAARNSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRF
Sbjct: 113 LIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRF 172

Query: 204 GQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEA--ELAVSEFSGNGAGIIA 261
            +TDLPIDDIAAV LLVYFGVSTLLDA+S+D  KS++EQKE   ELAVS+FSGNGAGI++
Sbjct: 173 XETDLPIDDIAAVGLLVYFGVSTLLDASSSDSQKSDEEQKEIIFELAVSDFSGNGAGILS 232

Query: 262 AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLG 321
           AAST+ STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH VATLLAVLGGSLLG
Sbjct: 233 AASTVASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLG 292

Query: 322 TFLSEKV 328
           T+LSEKV
Sbjct: 293 TYLSEKV 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836959|ref|XP_002886361.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332202|gb|EFH62620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  340 bits (871), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 202/300 (67%), Positives = 223/300 (74%), Gaps = 24/300 (8%)

Query: 51  SLRNPYL---------NFSRDPGASCENRNDVDC-----------KNCKMTRES--VHNL 88
           S RN Y          N S+     C  RND  C           +N  +  +S   H+ 
Sbjct: 47  SFRNQYFSRCLTQLRRNESQQLEFRCFRRNDSACYLEKAESEENIRNLDLLVDSSVAHSR 106

Query: 89  ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFF 147
                L+KF+   G + L G+  A AA   A+G QS    LGDLGDIS GFASAFLLIFF
Sbjct: 107 RETLRLLKFLAVSGSVALLGNDPAFAASSIANGTQSLVSSLGDLGDISSGFASAFLLIFF 166

Query: 148 SELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTD 207
           SELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHY DE+LPFRFG+TD
Sbjct: 167 SELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYADEVLPFRFGETD 226

Query: 208 LPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTII 267
           LPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SG+GAGI+AAA+TII
Sbjct: 227 LPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGSGAGIVAAANTII 285

Query: 268 STFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 327
           STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLLG FLSEK
Sbjct: 286 STFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEK 345

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15010676|gb|AAK73997.1| At1g64150/F22C12_10 [Arabidopsis thaliana] gi|23505909|gb|AAN28814.1| At1g64150/F22C12_10 [Arabidopsis thaliana]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 202/307 (65%), Positives = 224/307 (72%), Gaps = 18/307 (5%)

Query: 35  PFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDC-----------KNCKMTRE 83
           P     +NQ+ +     LR    N S+  G  C  RND  C           +N  +  E
Sbjct: 45  PIGFSVRNQSFSRCLTQLRR---NESQQLGFRCFQRNDAACYLEKAESEEHDRNLDVLVE 101

Query: 84  S--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFAS 140
           S   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS GFAS
Sbjct: 102 SSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFAS 161

Query: 141 AFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILP 200
           AFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVDE+LP
Sbjct: 162 AFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLP 221

Query: 201 FRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGII 260
           FRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNGAGI+
Sbjct: 222 FRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIV 280

Query: 261 AAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLL 320
           AAA+TIISTF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLL
Sbjct: 281 AAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLL 340

Query: 321 GTFLSEK 327
           G FLSEK
Sbjct: 341 GNFLSEK 347

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407980|ref|NP_564825.1| uncharacterized protein [Arabidopsis thaliana] gi|308191633|sp|Q94AX5.2|GDT11_ARATH RecName: Full=GDT1-like protein 1, chloroplastic; Flags: Precursor gi|332196081|gb|AEE34202.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  337 bits (864), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 201/300 (67%), Positives = 221/300 (73%), Gaps = 24/300 (8%)

Query: 51  SLRNPYL---------NFSRDPGASCENRNDVDC-----------KNCKMTRES--VHNL 88
           S+RN Y          N S+  G  C  RND  C           +N  +  ES   H+ 
Sbjct: 49  SVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLDVLVESSIAHSR 108

Query: 89  ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFF 147
                ++ F+   G + L G+  A AA    +  QS     GDLGDIS GFASAFLLIFF
Sbjct: 109 REIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFF 168

Query: 148 SELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTD 207
           SELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVDE+LPFRFG TD
Sbjct: 169 SELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTD 228

Query: 208 LPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTII 267
           LPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNGAGI+AAA+TII
Sbjct: 229 LPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTII 287

Query: 268 STFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 327
           STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLLG FLSEK
Sbjct: 288 STFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEK 347

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
TAIR|locus:2024628	370	AT1G64150 [Arabidopsis thalian	0.860	0.781	0.583	7.9e-78
TAIR|locus:2140872	359	AT4G13590 [Arabidopsis thalian	0.550	0.515	0.422	1.7e-34
WB|WBGene00021847	297	Y54F10AL.1 [Caenorhabditis ele	0.541	0.612	0.324	4e-19
TAIR|locus:2183632	293	AT5G36290 "AT5G36290" [Arabido	0.529	0.607	0.340	8.3e-19
TAIR|locus:2026879	228	AT1G68650 "AT1G68650" [Arabido	0.580	0.855	0.302	4.1e-17
UNIPROTKB|F1P1B3	254	TMEM165 "Uncharacterized prote	0.547	0.724	0.310	9.8e-16
TAIR|locus:2031195	230	AT1G25520 [Arabidopsis thalian	0.580	0.847	0.290	9.8e-16
POMBASE|SPAC17G8.08c	287	SPAC17G8.08c "human TMEM165 ho	0.157	0.184	0.490	1.6e-15
UNIPROTKB|B4DHW1	261	TMEM165 "cDNA FLJ60544, highly	0.547	0.704	0.324	2.7e-15
FB|FBgn0260659	503	CG42542 [Drosophila melanogast	0.166	0.111	0.5	3.4e-15

TAIR|locus:2024628 AT1G64150 [Arabidopsis thaliana (taxid:3702)]

 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 179/307 (58%), Positives = 198/307 (64%)

Query:    35 PFNSLCKNQTSTSKKLSLRNPYLNFSRDPGASCENRNDVDC-----------KNCKMTRE 83
             P     +NQ  +     LR    N S+  G  C  RND  C           +N  +  E
Sbjct:    45 PIGFSVRNQYFSRCLTQLRR---NESQQLGFRCFQRNDAACYLEKAESEEHDRNLDVLVE 101

Query:    84 S--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFAS 140
             S   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS GFAS
Sbjct:   102 SSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFAS 161

Query:   141 AFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVDEILP 200
             AFLLIFFSELGDKTFFI           TVF GTFGAL  MT+ISV+LGRTFHYVDE+LP
Sbjct:   162 AFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLP 221

Query:   201 FRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNXXXXX 260
             FRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGN     
Sbjct:   222 FRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIV 280

Query:   261 XXXXXXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLL 320
                      F LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLL
Sbjct:   281 AAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLL 340

Query:   321 GTFLSEK 327
             G FLSEK
Sbjct:   341 GNFLSEK 347

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2140872 AT4G13590 [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 85/201 (42%), Positives = 121/201 (60%)

Query:   137 GFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVD 196
             GF +AF LIF SE+GDKTFFI            V  G+ GAL+ MT++SV++G+ F  V 
Sbjct:   145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query:   197 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSED---------EQKEAEL 247
                P +F QT LPI + AA+ LL++FG+ ++ DA     +++++         E  EAE 
Sbjct:   204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEE 259

Query:   248 AVSEFSGNXXXXXXXXXXXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 307
              V E +                F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH+
Sbjct:   260 LVKEKASKKLTNPLEILWKS--FSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317

Query:   308 VATLLAVLGGSLLGTFLSEKV 328
             VAT+LA++GG+ L  ++SEK+
Sbjct:   318 VATVLAIMGGAFLANYISEKL 338

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

WB|WBGene00021847 Y54F10AL.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 70/216 (32%), Positives = 102/216 (47%)

Query:   133 DIS--RGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGR 190
             DIS   GF ++F +I  SELGDKT+FI           TVF+G  GALA MTV+S  LG 
Sbjct:    62 DISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG- 120

Query:   191 TFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA---ASTDGLKSEDE------ 241
                ++ +++P         +    +  L   FG+  L +    +  +G +  +E      
Sbjct:   121 ---WITQVIP-------RAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVA 170

Query:   242 QKEAELAVSEFS---GNXXXXXXXXXXXXXXFT---------LVFVAEWGDKSFFSTIAL 289
             ++E EL   +F    G               FT         L FVAEWGD+S  +TI L
Sbjct:   171 KREGELDAGKFEMLEGGGGVASQSETRKIFLFTSRIFIEAFSLTFVAEWGDRSQLTTIIL 230

Query:   290 AAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 325
              A  +  GVIGG + GH + T +AV+GG ++   +S
Sbjct:   231 GARENIAGVIGGGILGHALCTGIAVIGGKIVAQRIS 266

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2183632 AT5G36290 "AT5G36290" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 66/194 (34%), Positives = 94/194 (48%)

Query:   140 SAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVDEIL 199
             S+F +I  +E+GD+TF I           TV +G   AL  MT++S  LGR       I+
Sbjct:    87 SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 139

Query:   200 PFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA-ASTDGLKSED-EQKEAELAVSEFSGNXX 257
             P    +      + AA  L  +FG+  L  A  STD   ++  E +E E  +    G   
Sbjct:   140 PNLISRKHT---NSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 196

Query:   258 XXXXXXXXXX----XXFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 313
                             F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct:   197 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 256

Query:   314 VLGGSLLGTFLSEK 327
             V+GGS+L + +S++
Sbjct:   257 VVGGSMLASRISQR 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2026879 AT1G68650 "AT1G68650" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 63/208 (30%), Positives = 92/208 (44%)

Query:   131 LGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG- 189
             +G + +GF  +  + F SE+GDKTFF             V AG   AL  MT++S  LG 
Sbjct:     1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query:   190 -------RTF-HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDE 241
                    R + H++   L F FG   L               V   LD+   D  K+ D+
Sbjct:    61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDS---DLKKTNDQ 117

Query:   242 QKEAELAVSEFSGNXXXXXXXXX-XXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGVIG 300
              K +++   +                   F++ F  EWGDKS  +TI LAA  +PLGV+ 
Sbjct:   118 SKNSKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVL 177

Query:   301 GALAGHVVATLLAVLGGSLLGTFLSEKV 328
             G +    + T  AVLGG  L + +SE++
Sbjct:   178 GGIVAQTLCTTAAVLGGKSLASQISERI 205

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1P1B3 TMEM165 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 68/219 (31%), Positives = 97/219 (44%)

Query:   130 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 189
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    20 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 78

Query:   190 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL---LDAASTDG------LKSED 240
                 Y   ++P  +           +  L   FG+  L   L  +  +G      +++E 
Sbjct:    79 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAEI 127

Query:   241 EQKEAELAVSEF---SGNXXXXXXXXX-----------XXXXXFTLVFVAEWGDKSFFST 286
             ++K+ EL  ++     G+                         FTL F+AEWGD+S  +T
Sbjct:   128 KKKDEELQRTKLLNGPGDVETGSTATIPQKKWLHFISPIFVQAFTLTFLAEWGDRSQLTT 187

Query:   287 IALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 325
             I LAA   P GV  G   GH + T LAV+GG ++   +S
Sbjct:   188 IVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 226

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2031195 AT1G25520 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 61/210 (29%), Positives = 90/210 (42%)

Query:   131 LGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG- 189
             +  + +GF  +  + F SE+GDKTFF             V AG   AL  MT++S  LG 
Sbjct:     1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query:   190 -------RTF-HYVDEILPFRFGQTDLPIDDI--AAVCLLVYFGVSTLLDA-ASTDGLKS 238
                    R + H++  +L F FG   L  D              V   LDA    +G   
Sbjct:    61 AAPNLISRKWTHHITTLLFFGFGLWSL-WDGFKEGGGGSEELAEVEAELDADLKANGKSP 119

Query:   239 EDEQKEAELAVSEFSGNXXXXXXXXXXXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGV 298
             +D  K  +   ++                  F++ F  EWGDKS  +TI LAA  +P GV
Sbjct:   120 KDSSKRED--ENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGV 177

Query:   299 IGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
             + G +    + T  AV+GG  L + +SE++
Sbjct:   178 VLGGVVAQFLCTTAAVIGGKSLASQISERI 207

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

POMBASE|SPAC17G8.08c SPAC17G8.08c "human TMEM165 homolog" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 132 (51.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 26/53 (49%), Positives = 34/53 (64%)

Query:   270 FTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGT 322
             F L FV+EWGD+S  +TIA+AA+ +  GV  GA  GH   T LAV+ G  + T
Sbjct:   207 FALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYIST 259

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B4DHW1 TMEM165 "cDNA FLJ60544, highly similar to Transmembrane protein TPARL" [Homo sapiens (taxid:9606)]

 Score = 193 (73.0 bits), Expect = 2.7e-15, P = 2.7e-15
 Identities = 71/219 (32%), Positives = 95/219 (43%)

Query:   130 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 189
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    27 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 85

Query:   190 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA--STDGLKSEDEQKEAEL 247
                 Y   ++P  +         ++ V L   FG+  L +    S D  + E E+ +AEL
Sbjct:    86 ----YATTVIPRVYTYY------VSTV-LFAIFGIRMLREGLKMSPDEGQEELEEVQAEL 134

Query:   248 AVS--EFS--------GNXXXXXXXXX-----------XXXXXFTLVFVAEWGDKSFFST 286
                  EF         G+                          TL F+AEWGD+S  +T
Sbjct:   135 KKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTT 194

Query:   287 IALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 325
             I LAA   P GV  G   GH + T LAV+GG ++   +S
Sbjct:   195 IVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 233

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0260659 CG42542 [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query:   270 FTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 325
             FT+ F+AEWGD+S  +TI LAA+    GVI G + GH + T LAV+GG L+ + +S
Sbjct:   421 FTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKIS 476

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B8AAM2	GDT11_ORYSI	No assigned EC number	0.7610	0.6636	0.6539	N/A	no
Q5NAY7	GDT11_ORYSJ	No assigned EC number	0.7566	0.6636	0.6539	yes	no
Q94AX5	GDT11_ARATH	No assigned EC number	0.67	0.8214	0.7459	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002508001 SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (260 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	336
COG2119	190	COG2119, COG2119, Predicted membrane protein [Func	7e-28
pfam01169	78	pfam01169, UPF0016, Uncharacterized protein family	2e-15
pfam01169	78	pfam01169, UPF0016, Uncharacterized protein family	3e-13

>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown]

 Score =  107 bits (268), Expect = 7e-28
 Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 31/191 (16%)

Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
              + L++  +E+GDKT  IA LLA R     VFAG   AL AM  ++V++G   H    
Sbjct: 4   LLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVG---HAAAS 60

Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 257
           +LP R           A+  L + F V  L++    D    E+ Q  +   V        
Sbjct: 61  LLPER-------PLAWASGVLFLAFAVWMLIE----DKEDDEEAQAASPRGV-------- 101

Query: 258 GIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAAS-SPLGVIGGALAGHVVATLLAVLG 316
                    ++TF   F+AE GDK+  +TIALAA   SP  V  G   G ++A++LAVL 
Sbjct: 102 --------FVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGMILASVLAVLL 153

Query: 317 GSLLGTFLSEK 327
           G L+   L E+
Sbjct: 154 GKLIAGKLPER 164

Length = 190

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016

 Score = 69.8 bits (172), Expect = 2e-15
 Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 266 IISTFTLVFVAEWGDKSFFSTIALAA--ASSPLGVIGGALAGHVVATLLAVLGGSLLGTF 323
            +++F L+F+AE GDK+  +TIALAA  + SP  V  GA     +ATLLAVL G  L T 
Sbjct: 1   FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWLATL 60

Query: 324 LSEKV 328
           L  +V
Sbjct: 61  LPPRV 65

This family contains integral membrane proteins of unknown function. Most members of the family contain two copies of a region that contains an EXGD motif. Each of these regions contains three predicted transmembrane regions. Length = 78

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016

 Score = 63.6 bits (156), Expect = 3e-13
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAAT--VFAGTFGALAAMTVISVILGRTF 192
           F ++FLLIF +ELGDKT      LAAR S +   VF G   ALA  T+++V+LGR  
Sbjct: 1   FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWL 57

This family contains integral membrane proteins of unknown function. Most members of the family contain two copies of a region that contains an EXGD motif. Each of these regions contains three predicted transmembrane regions. Length = 78

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
KOG2881	294	consensus Predicted membrane protein [Function unk	100.0
COG2119	190	Predicted membrane protein [Function unknown]	100.0
COG2119	190	Predicted membrane protein [Function unknown]	99.87
PF01169	78	UPF0016: Uncharacterized protein family UPF0016; I	99.84
PF01169	78	UPF0016: Uncharacterized protein family UPF0016; I	99.84
KOG2881	294	consensus Predicted membrane protein [Function unk	99.57
COG4280	236	Predicted membrane protein [Function unknown]	97.27
TIGR02840	206	spore_YtaF putative sporulation protein YtaF. This	97.04
PRK11469	188	hypothetical protein; Provisional	96.38
PF01810	191	LysE: LysE type translocator; InterPro: IPR001123	94.57
PF03741	183	TerC: Integral membrane protein TerC family; Inter	93.1
PF03596	191	Cad: Cadmium resistance transporter; InterPro: IPR	92.01
COG1971	190	Predicted membrane protein [Function unknown]	91.8
TIGR00948	177	2a75 L-lysine exporter.	91.42
TIGR00145	283	FTR1 family protein. A characterized member from y	89.42
TIGR00949	185	2A76 The Resistance to Homoserine/Threonine (RhtB)	89.31
PF01914	203	MarC: MarC family integral membrane protein; Inter	89.05
PF03239	306	FTR1: Iron permease FTR1 family; InterPro: IPR0049	87.81
TIGR03716	215	R_switched_YkoY integral membrane protein, YkoY fa	85.75
COG0730	258	Predicted permeases [General function prediction o	83.32
TIGR03718	302	R_switched_Alx integral membrane protein, TerC fam	82.78
PRK10995	221	inner membrane protein; Provisional	82.48

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.2e-48  Score=367.60  Aligned_cols=194  Identities=40%  Similarity=0.602  Sum_probs=165.4

Q ss_pred             cchhHHHHHHHHHHHHhhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchH
Q 019749          132 GDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPID  211 (336)
Q Consensus       132 ~~~~~~fl~aF~lIFlAElGDKTQL~a~lLAaR~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~  211 (336)
                      +++.++|..++.|||++|+||||||+|++|||||+|..||.|+..||++||++++++|+.   .++.+|+++       +
T Consensus        63 ~s~~~~f~~SiSmI~vsEiGDKTFfiAAlmAmr~~R~~Vf~Ga~~AL~lMTiLS~~lG~a---ap~lipr~~-------T  132 (294)
T KOG2881|consen   63 SSFLQGFTASISMIFVSEIGDKTFFIAALMAMRYPRLTVFSGAMSALALMTILSVLLGWA---APNLIPRKY-------T  132 (294)
T ss_pred             HHHHHHHHHhhheeeeeeccchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHh---hhhhchHHH-------H
Confidence            357899999999999999999999999999999999999999999999999999999986   368899887       7


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCCCCCc--chHHHHHHHhhhhccC----------CCccc-----h----hh-HHHHHHH
Q 019749          212 DIAAVCLLVYFGVSTLLDAASTDGLKS--EDEQKEAELAVSEFSG----------NGAGI-----I----AA-ASTIIST  269 (336)
Q Consensus       212 ~i~AavLFl~FGl~tL~~a~~~~~~~~--eeE~~eae~~v~~~~~----------~~~g~-----~----~~-~~~f~~a  269 (336)
                      ++++.+||++||+|+|+|++.+.+.+.  |-||.|+|++.++...          +..+.     +    .. -+.|+++
T Consensus       133 ~~~~t~LF~iFGlkmL~eg~~~~~~~~~eE~eEVe~el~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~t~ffspifika  212 (294)
T KOG2881|consen  133 YYLATALFLIFGLKMLKEGWEMSPSEGQEELEEVEAELAKREDELDRLEEGLPGSAETGSQKSKFRRKLTLFFSPIFIKA  212 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHhccchhhhhhhcCCCCCccchhhhhhhHHHHHhccHHHHHH
Confidence            999999999999999999987644333  3344455544322110          11110     0    01 1478999


Q ss_pred             HHHHHHHHhCChhHHHHHHHhhccCCceeehHHHHHHHHHHHHHHHHHHHhhhcccHHHHhhhccC
Q 019749          270 FTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS  335 (336)
Q Consensus       270 F~lvFLAE~GDKTQLaTiaLAA~~~p~~V~~Ga~lgl~l~t~laVl~G~~l~~~is~r~i~~~aG~  335 (336)
                      |.++|++||||||||+||+|||+.+|++|++|+.+||.+||++||++|+++++|||+|++.+++|+
T Consensus       213 FsltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~lAskIS~rtVt~~ggi  278 (294)
T KOG2881|consen  213 FSLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKYLASKISVRTVTLIGGI  278 (294)
T ss_pred             HHHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHHHhhhheeEEEEEecch
Confidence            999999999999999999999999999999999999999999999999999999999999999986

>COG2119 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.8e-46  Score=333.40  Aligned_cols=171  Identities=35%  Similarity=0.490  Sum_probs=151.5

Q ss_pred             hHHHHHHHHHHHHhhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHH
Q 019749          135 SRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIA  214 (336)
Q Consensus       135 ~~~fl~aF~lIFlAElGDKTQL~a~lLAaR~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~  214 (336)
                      ++.|+.+..+|+++|+|||||+++++||+||+|++||.|+.+|++.||.+++++|++   .+..+|+++       .++.
T Consensus         1 l~~~~~s~~~v~laEiGDKT~lia~llA~r~~~~~v~~g~~~a~~~m~~la~~vG~~---~~~~~~~~~-------~~~~   70 (190)
T COG2119           1 LEALLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVGHA---AASLLPERP-------LAWA   70 (190)
T ss_pred             ChhHHHHHHHHHHHHhccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH---HhccCchhH-------HHHH
Confidence            357889999999999999999999999999998899999999999999999999997   467889886       7999


Q ss_pred             HHHHHHHHHHHHhhhhhcCCCCCcchHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhhccC
Q 019749          215 AVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASS  294 (336)
Q Consensus       215 AavLFl~FGl~tL~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE~GDKTQLaTiaLAA~~~  294 (336)
                      .+++|++||+|+++|+.      +++|+.++      .        ++..+|+++|+++|++|||||||++||+||++++
T Consensus        71 ~~~~Flafav~~l~edk------~~~~e~~~------~--------~~~~~f~~tfi~~FlaE~GDKTQiATIaLaA~~~  130 (190)
T COG2119          71 SGVLFLAFAVWMLIEDK------EDDEEAQA------A--------SPRGVFVTTFITFFLAELGDKTQIATIALAADYH  130 (190)
T ss_pred             HHHHHHHHHHHHhcccc------cccccccc------c--------ccccHHHHHHHHHHHHHhccHHHHHHHHHhhcCC
Confidence            99999999999999722      22222110      0        1235899999999999999999999999999976


Q ss_pred             -CceeehHHHHHHHHHHHHHHHHHHHhhhcccHHHHhhhccC
Q 019749          295 -PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS  335 (336)
Q Consensus       295 -p~~V~~Ga~lgl~l~t~laVl~G~~l~~~is~r~i~~~aG~  335 (336)
                       ||.|++|+++||++|++++|++|+++++|+|+|.++.++|.
T Consensus       131 ~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aal  172 (190)
T COG2119         131 SPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAAL  172 (190)
T ss_pred             CceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence             69999999999999999999999999999999999999874

>COG2119 Predicted membrane protein [Function unknown]

Probab=99.87  E-value=4.5e-22  Score=180.21  Aligned_cols=122  Identities=25%  Similarity=0.292  Sum_probs=104.5

Q ss_pred             chhHHHHHHHHHHhhhccccccccccccccCCCCCCCCCCccchhHHHHHHHHHHHHhhcCchHHHHHHHHHhccCC-cE
Q 019749           91 DSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSA-AT  169 (336)
Q Consensus        91 ~~~~~~~~l~~~fl~~~~~~~~~~~~d~~~~~~~~~~~g~~~~~~~~fl~aF~lIFlAElGDKTQL~a~lLAaR~~~-~~  169 (336)
                      |.++++|+.+.+|+.|+.+.+..|..|   +++..+-     +-...|+++|+++|++|||||||++|++||++|+. +.
T Consensus        63 ~~~~~~~~~~~~Flafav~~l~edk~~---~~e~~~~-----~~~~~f~~tfi~~FlaE~GDKTQiATIaLaA~~~~~~~  134 (190)
T COG2119          63 PERPLAWASGVLFLAFAVWMLIEDKED---DEEAQAA-----SPRGVFVTTFITFFLAELGDKTQIATIALAADYHSPWA  134 (190)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccccc---ccccccc-----ccccHHHHHHHHHHHHHhccHHHHHHHHHhhcCCCcee
Confidence            789999999999999999777655322   3333211     12469999999999999999999999999999998 45


Q ss_pred             eehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhh
Q 019749          170 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA  230 (336)
Q Consensus       170 VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a  230 (336)
                      ||+|+.+|++++++++|++|++   +.+++|++.       .+.+++++|++||+..+|+.
T Consensus       135 V~~Gt~lg~~l~s~laVl~G~~---ia~ki~~r~-------l~~~aallFl~fal~~~~~~  185 (190)
T COG2119         135 VFAGTTLGMILASVLAVLLGKL---IAGKLPERL-------LRFIAALLFLIFALVLLWQV  185 (190)
T ss_pred             eehhhHHHHHHHHHHHHHHHHH---HHccCCHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999996   689999987       68899999999999999973

>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities

Probab=99.84  E-value=1.2e-21  Score=155.16  Aligned_cols=76  Identities=43%  Similarity=0.602  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHhhcCchHHHHHHHHHhcc--CCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHH
Q 019749          138 FASAFLLIFFSELGDKTFFIAALLAARN--SAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAA  215 (336)
Q Consensus       138 fl~aF~lIFlAElGDKTQL~a~lLAaR~--~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~A  215 (336)
                      |+++|.++|++|+|||||++++.||+||  +++.|++|+.+|++++|+++|++|++   +.+++|+++       .++++
T Consensus         1 F~~sf~~iflaE~GDKTQl~t~~La~~~~~~~~~V~~G~~~al~~~~~lav~~G~~---l~~~ip~~~-------i~~~~   70 (78)
T PF01169_consen    1 FLTSFLLIFLAELGDKTQLATIALAARYPRNPWPVFAGATLALALATGLAVLLGSW---LASRIPERY-------IKWVA   70 (78)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCHHH-------HHHHH
Confidence            5789999999999999999999999999  44569999999999999999999997   578999987       79999


Q ss_pred             HHHHHHHH
Q 019749          216 VCLLVYFG  223 (336)
Q Consensus       216 avLFl~FG  223 (336)
                      +++|++||
T Consensus        71 ~~lFl~fG   78 (78)
T PF01169_consen   71 GALFLLFG   78 (78)
T ss_pred             HHHHHHHC
Confidence            99999987

These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane

>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities

Probab=99.84  E-value=2.3e-21  Score=153.60  Aligned_cols=70  Identities=40%  Similarity=0.501  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHhCChhHHHHHHHhhcc--CCceeehHHHHHHHHHHHHHHHHHHHhhhcccHHHHhhhccC
Q 019749          266 IISTFTLVFVAEWGDKSFFSTIALAAAS--SPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS  335 (336)
Q Consensus       266 f~~aF~lvFLAE~GDKTQLaTiaLAA~~--~p~~V~~Ga~lgl~l~t~laVl~G~~l~~~is~r~i~~~aG~  335 (336)
                      |+++|.++|+||||||||++|++||++|  +|+.|++|+++|++++++++|++|+++.+++|+|++++++|.
T Consensus         1 F~~sf~~iflaE~GDKTQl~t~~La~~~~~~~~~V~~G~~~al~~~~~lav~~G~~l~~~ip~~~i~~~~~~   72 (78)
T PF01169_consen    1 FLTSFLLIFLAELGDKTQLATIALAARYPRNPWPVFAGATLALALATGLAVLLGSWLASRIPERYIKWVAGA   72 (78)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            5789999999999999999999999999  899999999999999999999999999999999999999874

These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=99.57  E-value=2e-15  Score=143.51  Aligned_cols=85  Identities=27%  Similarity=0.360  Sum_probs=79.4

Q ss_pred             hHHHHHHHHHHHHhhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHH
Q 019749          135 SRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIA  214 (336)
Q Consensus       135 ~~~fl~aF~lIFlAElGDKTQL~a~lLAaR~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~  214 (336)
                      ...|+.+|.++|++|||||+|++|+.||++-+++.|++|+.+|+.+||.++|+.|+.   ++++|+.|.       ..++
T Consensus       206 spifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~---lAskIS~rt-------Vt~~  275 (294)
T KOG2881|consen  206 SPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKY---LASKISVRT-------VTLI  275 (294)
T ss_pred             cHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHH---HhhhheeEE-------EEEe
Confidence            348999999999999999999999999999999999999999999999999999995   789999886       5788


Q ss_pred             HHHHHHHHHHHHhhh
Q 019749          215 AVCLLVYFGVSTLLD  229 (336)
Q Consensus       215 AavLFl~FGl~tL~~  229 (336)
                      ++++|++||+..++.
T Consensus       276 ggi~Fi~Fgl~~i~~  290 (294)
T KOG2881|consen  276 GGILFIIFGLVYIFQ  290 (294)
T ss_pred             cchhHHHHHHHHHhc
Confidence            899999999999987

>COG4280 Predicted membrane protein [Function unknown]

Probab=97.27  E-value=0.0019  Score=60.55  Aligned_cols=159  Identities=25%  Similarity=0.312  Sum_probs=100.4

Q ss_pred             HHHHHhc--cCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcC-C
Q 019749          158 AALLAAR--NSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAST-D  234 (336)
Q Consensus       158 a~lLAaR--~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~-~  234 (336)
                      ++..+-.  |+.+.-++|+.+|+++.-.++..+|..+    ..+|..+       .+++++++.+.||-.-++.+.+. .
T Consensus        22 aIa~avg~~~~wr~al~ga~lglalvl~l~lvlGk~L----~lvPln~-------lqiv~gvLLllFG~rw~Rsavrr~a   90 (236)
T COG4280          22 AIAAAVGNIYKWRLALIGAVLGLALVLILTLVLGKLL----YLVPLNY-------LQIVSGVLLLLFGYRWIRSAVRRFA   90 (236)
T ss_pred             HHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccce----eeeechH-------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4444433  3344489999999999999999999974    4678775       68999999999999988876431 1


Q ss_pred             CC-CcchHHH-HHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhhcc-CCceeehHHHHHHHHHHH
Q 019749          235 GL-KSEDEQK-EAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAAS-SPLGVIGGALAGHVVATL  311 (336)
Q Consensus       235 ~~-~~eeE~~-eae~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE~GDKTQLaTiaLAA~~-~p~~V~~Ga~lgl~l~t~  311 (336)
                      +. +.-+||+ |+....++.   ..|. + .-.+..+|-.+.+ | |=---+..++|.+.+ .+..-..|+..+.++.-.
T Consensus        91 g~rkg~~ee~leE~~~ldq~---e~g~-~-~la~l~~fk~v~L-e-glEv~~iVialgaa~sqwleAi~gagfA~vlvlv  163 (236)
T COG4280          91 GIRKGGGEEKLEEGIVLDQE---EEGF-S-KLALLVVFKVVAL-E-GLEVSLIVIALGAASSQWLEAIMGAGFASVLVLV  163 (236)
T ss_pred             chhccCchhhHhhhhhcccc---cccc-h-hhhHHHHhHHHHH-h-hheeeeeeeeechhhhHHHHHHHHHHHHHHHHHH
Confidence            11 1111222 222222221   1121 1 1123333322222 1 222335566676664 466778888888888888


Q ss_pred             HHHHHHHHhhhcccHHHHhhhccC
Q 019749          312 LAVLGGSLLGTFLSEKVYSNFNLS  335 (336)
Q Consensus       312 laVl~G~~l~~~is~r~i~~~aG~  335 (336)
                      ++.++-+.+++ +|++.+|..+|.
T Consensus       164 l~~~lh~plar-vpe~~lKfvag~  186 (236)
T COG4280         164 LTAILHSPLAR-VPEPHLKFVAGA  186 (236)
T ss_pred             HHHHhccHHhh-CCchhHHHHHHH
Confidence            88888888854 999999998874

>TIGR02840 spore_YtaF putative sporulation protein YtaF

Probab=97.04  E-value=0.0055  Score=56.62  Aligned_cols=49  Identities=20%  Similarity=0.379  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCC
Q 019749          176 GALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTD  234 (336)
Q Consensus       176 lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~  234 (336)
                      +...+|+.++..+|+.   +.+++|.++       .++++++++++.|+++++++++.+
T Consensus        38 ~~~~~~~~lg~~~G~~---~~~~i~~~~-------~~~ig~~iLi~iG~~mi~~~~~~~   86 (206)
T TIGR02840        38 VISGLFIFISMLLGKF---LAKFLPPKV-------TEILGAFILIAIGIWIIYNAFRPK   86 (206)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHhchhh-------HHHHHHHHHHHHHHHHHHHHHhhh
Confidence            3445899999999986   567888765       699999999999999999998644

This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.

>PRK11469 hypothetical protein; Provisional

Probab=96.38  E-value=0.011  Score=54.06  Aligned_cols=45  Identities=13%  Similarity=0.251  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCC
Q 019749          179 AAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTD  234 (336)
Q Consensus       179 ~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~  234 (336)
                      .+|+.++-.+|+.   +.+++|. +       .+|++.+++++.|.||++|+++.+
T Consensus        48 ~~m~~~g~~~G~~---l~~~i~~-~-------~~~i~~~lL~~lG~~mi~e~~~~~   92 (188)
T PRK11469         48 TLTPLIGWGMGML---ASRFVLE-W-------NHWIAFVLLIFLGGRMIIEGFRGA   92 (188)
T ss_pred             HHHHHHHHHHHHH---HHHHHHH-H-------HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            6778888888886   3566664 3       699999999999999999988643

>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine

Probab=94.57  E-value=0.18  Score=44.46  Aligned_cols=70  Identities=16%  Similarity=0.104  Sum_probs=48.8

Q ss_pred             HHHHHHHHhccCCcE---eehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhh
Q 019749          155 FFIAALLAARNSAAT---VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  231 (336)
Q Consensus       155 QL~a~lLAaR~~~~~---VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~  231 (336)
                      .+..+--+++++++.   +.+|...+-++...++++.-..   +.+..|.-     ..+.++++++.++++|.++++...
T Consensus        11 ~~~~i~~~~~~G~~~~~~~~~G~~~~~~i~~~~~~~g~~~---l~~~~~~~-----~~~l~~~G~~~L~~lg~~~~~~~~   82 (191)
T PF01810_consen   11 NLLVISNGLRKGFKAGLPVALGAALGDLIYILLAVFGLSA---LLKSSPWL-----FMILKLLGALYLLYLGYKLLRSKF   82 (191)
T ss_pred             HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhChHH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence            345566677777543   7889999988888777776654   22333332     235789999999999999999744


Q ss_pred             c
Q 019749          232 S  232 (336)
Q Consensus       232 ~  232 (336)
                      +
T Consensus        83 ~   83 (191)
T PF01810_consen   83 S   83 (191)
T ss_pred             C
Confidence            3

A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane

>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein

Probab=93.10  E-value=1.4  Score=40.33  Aligned_cols=148  Identities=19%  Similarity=0.277  Sum_probs=81.2

Q ss_pred             CchHHHHHHHHHh---ccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHh
Q 019749          151 GDKTFFIAALLAA---RNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL  227 (336)
Q Consensus       151 GDKTQL~a~lLAa---R~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL  227 (336)
                      +|+=.+++++...   +++++..+.|...|+++-.++-......+    +..|         +..+++++..++-|.+.+
T Consensus        12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll----~~~~---------~i~~igG~~Ll~~a~k~~   78 (183)
T PF03741_consen   12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLL----SIFP---------WILLIGGLFLLYIAIKLL   78 (183)
T ss_pred             hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHH----HHHH---------HHHHHHHHHHHHHHHHHH
Confidence            4555555544332   33456799999999976666555544432    2212         356777777777777777


Q ss_pred             hhhhcCCCCCcchHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHh--CChhHHHHHHHhhccCCceeehHHHHH
Q 019749          228 LDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEW--GDKSFFSTIALAAASSPLGVIGGALAG  305 (336)
Q Consensus       228 ~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE~--GDKTQLaTiaLAA~~~p~~V~~Ga~lg  305 (336)
                      ++..     ++|+|+.+.+...+...    .   ....++.+...+-++-.  -=-+=+|.++++  .+++.++.|..++
T Consensus        79 ~~~~-----~~d~~~~~~~~~~~~~~----~---~~~~~~~~v~~I~~~DlvfSlDSV~a~~~it--~~~~iv~~g~i~s  144 (183)
T PF03741_consen   79 HEER-----DEDPENAEVEEEKKFFP----V---SKSSLWLAVIQIELADLVFSLDSVLAAVGIT--DDFFIVITGNIIS  144 (183)
T ss_pred             Hhcc-----ccccchhhhhhhhcccc----c---hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--hhHHHHHHHHHHH
Confidence            7632     11111111111000100    0   01234444433332221  123556777776  7889999999998


Q ss_pred             HHHHHHHHHHHHHHhhhccc
Q 019749          306 HVVATLLAVLGGSLLGTFLS  325 (336)
Q Consensus       306 l~l~t~laVl~G~~l~~~is  325 (336)
                      ...--..+-+..+.+.++-.
T Consensus       145 i~~m~~~~~~~~~~l~~~p~  164 (183)
T PF03741_consen  145 ILLMRFLSFLLAKLLERFPY  164 (183)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            88887777777777766533

TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane

>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family

Probab=92.01  E-value=0.65  Score=43.05  Aligned_cols=52  Identities=13%  Similarity=0.315  Sum_probs=39.2

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhh
Q 019749          167 AATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  229 (336)
Q Consensus       167 ~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~  229 (336)
                      ++.|++|=.+|..+.-++|.+.+..    ...+|+.+      +..+++ .+=+++|++.++.
T Consensus        25 ~~~I~~GqylG~~~Lv~~Sl~~~~~----l~~ip~~w------iLGlLG-liPI~lGi~~l~~   76 (191)
T PF03596_consen   25 RRQIVIGQYLGFTILVLASLLGAFG----LLFIPPEW------ILGLLG-LIPIYLGIKALFS   76 (191)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHH----HHhCCHHH------HHHHHH-HHHHHHHHHHHHc
Confidence            4559999999999998889888865    34788765      235554 4568999998875

To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.

>COG1971 Predicted membrane protein [Function unknown]

Probab=91.80  E-value=0.65  Score=43.24  Aligned_cols=45  Identities=16%  Similarity=0.400  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCC
Q 019749          179 AAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTD  234 (336)
Q Consensus       179 ~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~  234 (336)
                      ++|.++.-..|+.+   ..++. .       +.+|++.+++++.|+||++++.+++
T Consensus        48 ~i~pliG~~~g~~~---s~~i~-~-------~~~wigf~lL~~lG~~mI~e~f~~~   92 (190)
T COG1971          48 AIMPLIGWFIGKFL---STFIA-E-------WAHWIGFVLLIILGLKMIIEGFKNE   92 (190)
T ss_pred             HHHHHHHHHHHHHH---HHHHH-H-------HHHHHHHHHHHHHHHHHHHHHhchh
Confidence            44555555666542   22332 2       3799999999999999999988764

>TIGR00948 2a75 L-lysine exporter

Probab=91.42  E-value=2.5  Score=37.26  Aligned_cols=67  Identities=10%  Similarity=0.036  Sum_probs=44.1

Q ss_pred             HHHHHHhccCCcE-eehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhh
Q 019749          157 IAALLAARNSAAT-VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  231 (336)
Q Consensus       157 ~a~lLAaR~~~~~-VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~  231 (336)
                      ..+..++++++-. ..+|...|.++...++++.-..+   -...|.-.     .+.++++++-.+++|..+++...
T Consensus        11 ~vi~~~~~~~~g~~~~~G~~~g~~i~~~~~~~Gl~~l---l~~~p~~~-----~~l~~~Ga~YLlylg~~~~r~~~   78 (177)
T TIGR00948        11 FVLRQGIRREHVLLIVALCCICDLVLIAAGVFGVAAL---LAASPILL-----AVLTWGGALFLLWYGFLAAKTAW   78 (177)
T ss_pred             HHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445555555543 77888888888877666655432   22334332     25788988877889999998753

>TIGR00145 FTR1 family protein

Probab=89.42  E-value=5.2  Score=39.14  Aligned_cols=151  Identities=21%  Similarity=0.190  Sum_probs=74.0

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCCCCCcchHHHHHH
Q 019749          167 AATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAE  246 (336)
Q Consensus       167 ~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~~~~~eeE~~eae  246 (336)
                      +++|+.|+.+|+++.-++++++-..+..++.-..+..-   .-+..++|+++....++||...+.+..   ++-|++ .+
T Consensus        38 ~~~V~~G~~~gl~~s~~~a~~~~~~~~~~~~~~~~el~---eg~~~lvAv~~l~~m~~Wm~~~~~~~~---~~i~~~-~~  110 (283)
T TIGR00145        38 RGWVWVGVLAGFAACLAIGIGVIGAYGSLQKDEFKELL---EGIFGVIAVVMLSYMGLWMLRMQRKWR---VKIERQ-LV  110 (283)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-HH
Confidence            45799999999999888777765532111111101100   113567778888999999996532211   111111 11


Q ss_pred             HhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhhccCCceeehHHHHHHHHHHHHHHHHHHHhhhcccH
Q 019749          247 LAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSE  326 (336)
Q Consensus       247 ~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE~GDKTQLaTiaLAA~~~p~~V~~Ga~lgl~l~t~laVl~G~~l~~~is~  326 (336)
                      .+++.    +.   +.+..++.+|+.++ =| |=-|=+=-.+.+...+...+..|..+|.+++.+++.+.=+. +.|+|.
T Consensus       111 ~al~~----~~---~~~al~~l~flaV~-RE-G~EtVlF~~g~~~~~~~~~~~gg~~~Gl~~~~~~g~li~~~-~~~i~l  180 (283)
T TIGR00145       111 QALKR----KR---SGWAIALIAFIAVV-RE-GLETVLFLAGFQQGSHATAYIGPAVAGLIVAVVVGVLLYRG-GSRLSL  180 (283)
T ss_pred             HHHhc----Cc---chhHHHHHHHHHHH-Hh-hhHHHHhHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHH-HhhCCH
Confidence            11111    00   11233334443322 00 22222111222222222223335888888887777766544 477998


Q ss_pred             HHHhhhcc
Q 019749          327 KVYSNFNL  334 (336)
Q Consensus       327 r~i~~~aG  334 (336)
                      |..=.+++
T Consensus       181 ~~FF~~t~  188 (283)
T TIGR00145       181 KIFFILSS  188 (283)
T ss_pred             HHHHHHHH
Confidence            87655543

A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.

>TIGR00949 2A76 The Resistance to Homoserine/Threonine (RhtB) Family protein

Probab=89.31  E-value=2.2  Score=37.58  Aligned_cols=65  Identities=14%  Similarity=0.103  Sum_probs=41.7

Q ss_pred             HHHHHHhccCCc--E-eehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhh
Q 019749          157 IAALLAARNSAA--T-VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  229 (336)
Q Consensus       157 ~a~lLAaR~~~~--~-VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~  229 (336)
                      +++.-+++++++  + +.+|..+|.++...++++.-..   +-+..|.-.     .+.++++++..+++|..++++
T Consensus         8 ~~~~~~~~~G~~~~~~~~~G~~~g~~~~~~~~~~Gl~~---l~~~~~~~~-----~~l~~~Ga~yLl~lg~~~~~~   75 (185)
T TIGR00949         8 VVMQTSLSSGRRAGVLTILGIALGDAIWIVLSLLGLAV---LISKSVILF-----TVIKWLGGAYLIYLGIKMLRK   75 (185)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHH-----HHHHHHHHHHHHHHHHHHHHc
Confidence            344455555433  3 7788899988887777763332   122334322     257889888788899998875

>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC

Probab=89.05  E-value=4.3  Score=37.50  Aligned_cols=108  Identities=19%  Similarity=0.189  Sum_probs=60.1

Q ss_pred             cchHHHHHHHHHHHHHHHHhhhhhcCCCCCcchHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHH
Q 019749          208 LPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTI  287 (336)
Q Consensus       208 ~~v~~i~AavLFl~FGl~tL~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE~GDKTQLaTi  287 (336)
                      ++-.+++++++++..|+.|+....+.++ ..++|.+|+++ .++.     .    ..++..    =.+  -|.-|=-+++
T Consensus        69 l~af~IaGGiiL~~ia~~ml~~~~~~~~-~~~~~~~~~~~-~~~~-----a----i~PLa~----Pll--aGPG~It~vi  131 (203)
T PF01914_consen   69 LPAFRIAGGIILFLIALEMLFGSPSSEK-SSPDEKEEAKD-AEDI-----A----IVPLAI----PLL--AGPGTITTVI  131 (203)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcccc-cccchhhhhcc-cccc-----e----ecccch----hhc--cChHHHHHHH
Confidence            3447999999999999999986332211 11111111111 0010     0    001000    011  2555555666


Q ss_pred             HHhhccCC---ceeehHHHHHHHHHHHHHHHHHHHhhhcccHHHHhhh
Q 019749          288 ALAAASSP---LGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNF  332 (336)
Q Consensus       288 aLAA~~~p---~~V~~Ga~lgl~l~t~laVl~G~~l~~~is~r~i~~~  332 (336)
                      .++++++.   ..+.+++.+...+.+.+....++++.+++.+.-++.+
T Consensus       132 ~~~~~~~~~~~~~~~~~ai~~~~~~~~l~l~~a~~i~~~lG~~g~~vi  179 (203)
T PF01914_consen  132 VLSAEAGSLQSLLIVLIAILLVALITYLILRFADKIMRRLGKTGLQVI  179 (203)
T ss_pred             HHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH
Confidence            67776553   3455666666777777888888888888887665543

These proteins may be transporters. ; GO: 0016021 integral to membrane

>PF03239 FTR1: Iron permease FTR1 family; InterPro: IPR004923 The Saccharomyces cerevisiae (Baker's yeast) iron permease FTR1 is a plasma membrane permease for high-affinity iron uptake

Probab=87.81  E-value=8.2  Score=37.66  Aligned_cols=161  Identities=21%  Similarity=0.153  Sum_probs=84.8

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHcccccccccc---cCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCCCCCcchHHH
Q 019749          167 AATVFAGTFGALAAMTVISVILGRTFHYVDEI---LPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQK  243 (336)
Q Consensus       167 ~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~---LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~~~~~eeE~~  243 (336)
                      +++|+.|+..|++..-.+++.+-.....+...   ..+...   .-....++.++-....+|+.+...++.+ +-+++.+
T Consensus        35 ~~~V~~G~~~g~~~s~~~~~~~~~~~~~~~~~~~~~~~e~~---eg~~~liA~~li~~m~~wm~~~~~~~~~-~~~~~~~  110 (306)
T PF03239_consen   35 RRWVWLGVAAGLVASLVIGAVFAVIFYTLSGDYWGISEELF---EGAISLIAVALITWMVFWMRRHGRKMKG-EWEDKLA  110 (306)
T ss_pred             hheeeecHhHHHHHHHHHHHHHHHHHHhhccchhhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhch-hHHHHHH
Confidence            47899999999999998888877653222210   000110   0023455566677888888875322221 1111110


Q ss_pred             HHHHhhhh---ccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhhccC--CceeehHHHHHHHHHHHHHHHHHH
Q 019749          244 EAELAVSE---FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASS--PLGVIGGALAGHVVATLLAVLGGS  318 (336)
Q Consensus       244 eae~~v~~---~~~~~~g~~~~~~~f~~aF~lvFLAE~GDKTQLaTiaLAA~~~--p~~V~~Ga~lgl~l~t~laVl~G~  318 (336)
                      ..-...++   .....++....+..+..+|+.+ +=| |=-|=+-..++.+..+  ...+..|+.+|.+++.+++++.-+
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~afl~v-lRE-G~E~vLfl~a~~~~~~~~~~~~~~g~~~G~~~a~~~~~~~~~  188 (306)
T PF03239_consen  111 KALSSGSEDARASQKDEGGGSKWALFLLAFLIV-LRE-GLEAVLFLAALAASLRKDAASILLGAILGIAAAVVLGWLLYR  188 (306)
T ss_pred             HHHhhccchhhhhhhccccchhhHHHHHHHHHH-HHh-hHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000000   0001111112234445555322 111 4455555556666533  677888888898888888888866


Q ss_pred             HhhhcccHHHHhhhcc
Q 019749          319 LLGTFLSEKVYSNFNL  334 (336)
Q Consensus       319 ~l~~~is~r~i~~~aG  334 (336)
                      .. .++|.+..-.++|
T Consensus       189 ~~-~~i~~~~~f~~~~  203 (306)
T PF03239_consen  189 GL-IRISLRSFFIITG  203 (306)
T ss_pred             HH-HhcChHHHHHHHH
Confidence            54 5588777665554

Also included in this family are bacterial hypothetical integral membrane proteins.; GO: 0055085 transmembrane transport, 0016020 membrane

>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family

Probab=85.75  E-value=2.8  Score=39.56  Aligned_cols=139  Identities=19%  Similarity=0.249  Sum_probs=72.5

Q ss_pred             CchHHHHHHHHH---hccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHh
Q 019749          151 GDKTFFIAALLA---ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL  227 (336)
Q Consensus       151 GDKTQL~a~lLA---aR~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL  227 (336)
                      +|+-.+++++-.   .+++++..+.|...|+++--++-.+....+    + +|         ..++++++..++-|..++
T Consensus         9 ~DN~~via~~~~~LP~~~r~~al~~Gi~gAivlR~i~i~~~~~Ll----~-~~---------~l~~iGG~~Ll~~~~k~l   74 (215)
T TIGR03716         9 ADNALVLAVMVKHLPEKQRKKALFYGLIGAYVFRFIALFLASFLI----K-FW---------WIKAIGALYLLYLAIKHF   74 (215)
T ss_pred             hhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H-HH---------HHHHHHHHHHHHHHHHHH
Confidence            355444444322   233455689999999887766655544322    1 22         246666666666677776


Q ss_pred             hhhhcCCCCCcchHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHH--hCChhHHHHHHHhhccCCceeehHHHHH
Q 019749          228 LDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAE--WGDKSFFSTIALAAASSPLGVIGGALAG  305 (336)
Q Consensus       228 ~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~lvFLAE--~GDKTQLaTiaLAA~~~p~~V~~Ga~lg  305 (336)
                      ++    +++++++  ++.+    . .++  +     ..++.+...+-++-  |-=-+=+|.++++  .+++-++.|..++
T Consensus        75 ~~----~~~~~~~--~~~~----~-~~~--~-----~~f~~av~~I~~~DlvFSlDSV~A~~git--~~~~ii~~g~~~s  134 (215)
T TIGR03716        75 RK----KKKGKED--EEAE----K-KKA--H-----SGFWRTVLKVELMDIAFSVDSILAAVALS--GQFWVVFLGGIIG  134 (215)
T ss_pred             Hh----ccccccc--cccc----c-ccc--c-----chHHHHHHHHHHHHHHHHhhhHHHHHHhc--cChHHHHHHHHHH
Confidence            64    2111111  1100    0 001  1     12344433332221  1223456666664  6888888888887


Q ss_pred             HHHHHHHHHHHHHHhhhc
Q 019749          306 HVVATLLAVLGGSLLGTF  323 (336)
Q Consensus       306 l~l~t~laVl~G~~l~~~  323 (336)
                      ...--..+-+..+++.++
T Consensus       135 Il~lr~~s~~l~~li~r~  152 (215)
T TIGR03716       135 ILIMRFAATIFVKLLERF  152 (215)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            776666666666666554

Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.

>COG0730 Predicted permeases [General function prediction only]

Probab=83.32  E-value=7.2  Score=36.27  Aligned_cols=152  Identities=20%  Similarity=0.131  Sum_probs=74.1

Q ss_pred             eehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHHHhhhhhcCCCCCcchHHHHHHHhh
Q 019749          170 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAV  249 (336)
Q Consensus       170 VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~tL~~a~~~~~~~~eeE~~eae~~v  249 (336)
                      +-.-...-+.....+++.+|.+   +..++|.+.       .+..-+++.++.++++++...... .++++++.......
T Consensus        71 v~~~~~~~l~~~~~~G~~lG~~---l~~~~~~~~-------l~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  139 (258)
T COG0730          71 VDWKLALILLLGALIGAFLGAL---LALLLPAEL-------LKLLFGLLLLLLALYMLLGPRLAK-AEDRAARLRPLLFA  139 (258)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHH---HHHhCCHHH-------HHHHHHHHHHHHHHHHHHhccccc-ccccccccCcchhH
Confidence            6666666677777888888854   456778765       344345577888888888733200 01110000000000


Q ss_pred             -hhccCCCccchh----hHHHHHHHHHHHHHHHhCChhHHHHHHH----hhc-----cCC-ceeehHHHH-HHHHHHHHH
Q 019749          250 -SEFSGNGAGIIA----AASTIISTFTLVFVAEWGDKSFFSTIAL----AAA-----SSP-LGVIGGALA-GHVVATLLA  313 (336)
Q Consensus       250 -~~~~~~~~g~~~----~~~~f~~aF~lvFLAE~GDKTQLaTiaL----AA~-----~~p-~~V~~Ga~l-gl~l~t~la  313 (336)
                       ...-+-..|..+    .-.-+...-.+..+....+|--.+|-..    .+.     |-. .+..--... .+.+.+.++
T Consensus       140 ~~~~~g~~~G~~sG~~G~GgG~~~vp~l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G  219 (258)
T COG0730         140 LALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPLKLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILG  219 (258)
T ss_pred             HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence             000000001000    0001222233334444443333222211    110     111 111111122 788899999


Q ss_pred             HHHHHHhhhcccHHHHhhh
Q 019749          314 VLGGSLLGTFLSEKVYSNF  332 (336)
Q Consensus       314 Vl~G~~l~~~is~r~i~~~  332 (336)
                      .+.|.++.++++++.++++
T Consensus       220 ~~lG~~l~~~~~~~~lr~~  238 (258)
T COG0730         220 AYLGARLARRLSPKVLRRL  238 (258)
T ss_pred             HHHHHHHHHhcCHHHHHHH
Confidence            9999999999999999875

>TIGR03718 R_switched_Alx integral membrane protein, TerC family

Probab=82.78  E-value=18  Score=35.97  Aligned_cols=66  Identities=21%  Similarity=0.315  Sum_probs=39.8

Q ss_pred             CchHHHHHHHHHh-----ccCCcEeehhHHHHHHHHHHHHHHHcccccccccccCccccCCCcchHHHHHHHHHHHHHHH
Q 019749          151 GDKTFFIAALLAA-----RNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVS  225 (336)
Q Consensus       151 GDKTQL~a~lLAa-----R~~~~~VflGa~lAL~l~t~LaVllG~~l~~i~~~LP~~~~~~~~~v~~i~AavLFl~FGl~  225 (336)
                      +|+-+..+++.+.     +++++..+.|...|++.=.+ -+.+|.++   -+.+|         ...+++++..++-|.+
T Consensus        77 vDN~fV~~~if~~f~vP~~~q~rvL~~Gi~gAlvlR~i-~i~~g~~L---i~~f~---------wi~~ifG~fLi~~a~k  143 (302)
T TIGR03718        77 VDNLFVFLLIFSYFAVPREYQHRVLFWGILGALVLRAI-FIALGAAL---IEQFH---------WVLYIFGAFLLYTGIK  143 (302)
T ss_pred             hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---HHHhH---------HHHHHHHHHHHHHHHH
Confidence            7999988888875     33456688899888876544 44555542   12222         2345555555555555


Q ss_pred             Hhhh
Q 019749          226 TLLD  229 (336)
Q Consensus       226 tL~~  229 (336)
                      ++++
T Consensus       144 ~~~~  147 (302)
T TIGR03718       144 MLFE  147 (302)
T ss_pred             HHhh
Confidence            5553

Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.

>PRK10995 inner membrane protein; Provisional

Probab=82.48  E-value=2.3  Score=39.64  Aligned_cols=22  Identities=23%  Similarity=0.345  Sum_probs=18.8

Q ss_pred             chHHHHHHHHHHHHHHHHhhhh
Q 019749          209 PIDDIAAVCLLVYFGVSTLLDA  230 (336)
Q Consensus       209 ~v~~i~AavLFl~FGl~tL~~a  230 (336)
                      +..+++++++.+.+|+.|++..
T Consensus        74 ~a~rIaGGilL~~igi~ml~~~   95 (221)
T PRK10995         74 PGLRIAGGLIVAFIGFRMLFPQ   95 (221)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC
Confidence            3469999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 44/331 (13%), Positives = 91/331 (27%), Gaps = 116/331 (35%)

Query: 72  DVDCKNCK------MTRESVHNLANDSGLIKFVMF-FGLLTLQGSQTAVAAVDFASGLQ- 123
           + DCK+ +      +++E + ++      +   +  F  L  +  +     V+    L+ 
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE--EVLRI 89

Query: 124 SFPFLGD-LGDISRGFASAFLLIFFSELGDKTF-----FI--------------AALLAA 163
           ++ FL   +    R    + +   + E  D+ +     F                ALL  
Sbjct: 90  NYKFLMSPIKTEQRQ--PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 164 RNSAATVFAGTFGA----LAAMTV---------------ISV-----------ILGRTFH 193
           R +   +  G  G+    +A                   +++           +L +  +
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 194 YVD---EILPFRFGQTDLPIDDIAAV------------CLLV-----------YFGVS-- 225
            +D              L I  I A             CLLV            F +S  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 226 TLL---DAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFT----LVFVAEW 278
            LL       TD L          +++   S               T T       + ++
Sbjct: 268 ILLTTRFKQVTDFL---SAATTTHISLDHHS--------------MTLTPDEVKSLLLKY 310

Query: 279 GDKSFFSTIALAAASSPL--GVIGGALAGHV 307
            D            ++P    +I  ++   +
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00