Citrus Sinensis ID: 019830
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 335 | ||||||
| 449527442 | 507 | PREDICTED: protein ECERIFERUM 1-like, pa | 0.892 | 0.589 | 0.597 | 1e-104 | |
| 449432335 | 624 | PREDICTED: protein ECERIFERUM 1-like [Cu | 0.892 | 0.479 | 0.597 | 1e-103 | |
| 359489248 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.904 | 0.489 | 0.602 | 1e-103 | |
| 359489254 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.901 | 0.487 | 0.598 | 1e-103 | |
| 297734710 | 631 | unnamed protein product [Vitis vinifera] | 0.901 | 0.478 | 0.601 | 1e-102 | |
| 359489252 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.901 | 0.487 | 0.601 | 1e-102 | |
| 297734709 | 2763 | unnamed protein product [Vitis vinifera] | 0.904 | 0.109 | 0.599 | 1e-101 | |
| 359489250 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.904 | 0.489 | 0.596 | 1e-101 | |
| 225454040 | 620 | PREDICTED: protein WAX2 [Vitis vinifera] | 0.904 | 0.488 | 0.572 | 1e-100 | |
| 224129430 | 622 | predicted protein [Populus trichocarpa] | 0.901 | 0.485 | 0.625 | 1e-99 |
| >gi|449527442|ref|XP_004170720.1| PREDICTED: protein ECERIFERUM 1-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/333 (59%), Positives = 241/333 (72%), Gaps = 34/333 (10%)
Query: 5 GTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSRSHHHSS--IVPEPITSVT 62
G P+WR DGV++ LLHAGPVEF+YYWLHRALHHHYLYSR H H IV EPITSV
Sbjct: 116 GRNLPLWRTDGVVITFLLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVI 175
Query: 63 RPFAEHITYFVLFATPLITTALTGAGSIVPAFGYITYIDLMNNMGHCNFGLIPKWLFTIF 122
PFAEH+TYF+LFA P++T TG S+ Y+TYID MNNMGHCNF +IP LFT+F
Sbjct: 176 HPFAEHLTYFLLFAIPMLTVLFTGISSLAVYIFYLTYIDFMNNMGHCNFEIIPNRLFTLF 235
Query: 123 PPLKYLMYTPS-------PLTASYAAPGELLD----------DSL------------DVV 153
PPLKY +YTPS +Y+ L D DSL DVV
Sbjct: 236 PPLKYFLYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTLDNSSDSLYEKSLKREEEVADVV 295
Query: 154 YLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTFVVER 213
+LTHLTTPESIYH+RLG A LAS+PH +S WY WLL P+T+ SM++TWIYGRTFVVER
Sbjct: 296 HLTHLTTPESIYHLRLGFADLASRPH---TSTWYTWLLSPITMGSMLLTWIYGRTFVVER 352
Query: 214 NRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLGLLNQGEELN 273
N+ KLK+QTWA K+N+QYF Q ++IN +IE+AI+EA++KG +V SLGLLNQGEELN
Sbjct: 353 NQFEKLKMQTWAIPKFNVQYFLQWQKQAINSMIEDAIVEADQKGCKVFSLGLLNQGEELN 412
Query: 274 RYGGLFVHKNPELKIKVVDGSSLAVAVLTNSIP 306
YGGL+V +NP+L+++VVDGSSLAVAV+ NSIP
Sbjct: 413 IYGGLYVQRNPKLRVRVVDGSSLAVAVVLNSIP 445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432335|ref|XP_004133955.1| PREDICTED: protein ECERIFERUM 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359489248|ref|XP_002265685.2| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489254|ref|XP_002265189.2| PREDICTED: protein WAX2-like [Vitis vinifera] gi|297734711|emb|CBI16762.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297734710|emb|CBI16761.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489252|ref|XP_002263787.2| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297734709|emb|CBI16760.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489250|ref|XP_003633900.1| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225454040|ref|XP_002262647.1| PREDICTED: protein WAX2 [Vitis vinifera] gi|297744851|emb|CBI38119.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224129430|ref|XP_002320584.1| predicted protein [Populus trichocarpa] gi|222861357|gb|EEE98899.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 335 | ||||||
| UNIPROTKB|Q109K1 | 595 | LOC_Os10g33250 "CER1 protein, | 0.889 | 0.500 | 0.351 | 3.8e-46 | |
| TAIR|locus:2204813 | 627 | AT1G02190 "AT1G02190" [Arabido | 0.394 | 0.210 | 0.626 | 4.9e-41 | |
| UNIPROTKB|Q7XDI3 | 621 | Os10g0471100 "CER1 protein, pu | 0.394 | 0.212 | 0.597 | 2.7e-39 | |
| TAIR|locus:2040666 | 613 | AT2G37700 "AT2G37700" [Arabido | 0.388 | 0.212 | 0.583 | 2.9e-37 | |
| UNIPROTKB|Q6ETL8 | 628 | P0544B02.10 "Os02g0178800 prot | 0.555 | 0.296 | 0.306 | 7.9e-33 | |
| TAIR|locus:2174368 | 632 | CER3 "ECERIFERUM 3" [Arabidops | 0.713 | 0.378 | 0.274 | 3.6e-16 |
| UNIPROTKB|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 111/316 (35%), Positives = 164/316 (51%)
Query: 2 LPGGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRAXXXXXXXXXXXXXXXI--VPEPIT 59
+PGG P+WR DG L+ALLHAGPVEF+YYW H I + +T
Sbjct: 113 VPGGQHLPLWRTDGAGLIALLHAGPVEFLYYWFHPVIHPFAELVAYELLFSIPLIACALT 172
Query: 60 SVTRPFA-EHITYFVLFATPL--ITTALTGAGSIV--PAFGYITYIDLMNNMGHCNFGLI 114
A E ++ F + L + P Y+ Y +++ H F
Sbjct: 173 GTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQF--- 229
Query: 115 PKWLFTIFPPLKYLMYTPSPLTASYAAPGELL----DDSLDVVYLTHLTTPESIYHMRLG 170
+ +++F P +Y ++ L ++++DVV+LTHLTT SIYHMR G
Sbjct: 230 -RTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNNEEEEAVDVVHLTHLTTLHSIYHMRPG 288
Query: 171 LASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTFVVERNRLNKLKLQTWAKSKYN 230
A AS+P+ S WY ++WP++ SM++TW YG +F VERN + K+++Q+WA +Y+
Sbjct: 289 FAEFASRPYV---SRWYMRMMWPLSWLSMVLTWTYGSSFTVERNVMKKIRMQSWAIPRYS 345
Query: 231 MQYFSQQPNESINRXXXXXXXXXXXKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKV 290
Y E+IN GA+V+SLGLLNQ LN+ G ++ K P+L ++
Sbjct: 346 FHYGLDWEKEAINDLIEKAVCEADKNGAKVVSLGLLNQAHTLNKSGEQYLLKYPKLGARI 405
Query: 291 VDGSSLAVAVLTNSIP 306
VDG+SLA AV+ NSIP
Sbjct: 406 VDGTSLAAAVVVNSIP 421
|
|
| TAIR|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00010554001 | SubName- Full=Chromosome undetermined scaffold_268, whole genome shotgun sequence; (618 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 335 | |||
| PLN02869 | 620 | PLN02869, PLN02869, fatty aldehyde decarbonylase | 1e-168 | |
| pfam04116 | 114 | pfam04116, FA_hydroxylase, Fatty acid hydroxylase | 4e-10 | |
| COG3000 | 271 | COG3000, ERG3, Sterol desaturase [Lipid metabolism | 5e-07 |
| >gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase | Back alignment and domain information |
|---|
Score = 482 bits (1242), Expect = e-168
Identities = 217/337 (64%), Positives = 252/337 (74%), Gaps = 34/337 (10%)
Query: 1 MLPGGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSR--SHHHSSIVPEPI 58
+LPG + P+WR DGV++ LLH GPVEF+YYWLHRALHHHYLYSR SHHHSSIV EPI
Sbjct: 112 ILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPI 171
Query: 59 TSVTRPFAEHITYFVLFATPLITTALTGAGSIVPAFGYITYIDLMNNMGHCNFGLIPKWL 118
TSV PFAEHI YF+LFA PL+TT TG SI FGYI+YID MNNMGHCNF LIPKWL
Sbjct: 172 TSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWL 231
Query: 119 FTIFPPLKYLMYTPS-----------------PL------------TASYAAPGELLDDS 149
F+IFPPLKYLMYTPS P+ Y + ++
Sbjct: 232 FSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPEEI 291
Query: 150 LDVVYLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTF 209
DVV+LTHLTTP+SIYH+RLG ASLASKP+ S+WY L+WPVT +SMM+TWIYGRTF
Sbjct: 292 PDVVHLTHLTTPDSIYHLRLGFASLASKPY---ISKWYLRLMWPVTSWSMMLTWIYGRTF 348
Query: 210 VVERNRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLGLLNQG 269
V+ERNR NKL LQTW KY +QY + NESIN LIEEAILEA+++G +V+SLGLLNQG
Sbjct: 349 VLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQG 408
Query: 270 EELNRYGGLFVHKNPELKIKVVDGSSLAVAVLTNSIP 306
EELNRYG L++H+NP+LKIKVVDGSSLAVAV+ NSIP
Sbjct: 409 EELNRYGELYIHRNPKLKIKVVDGSSLAVAVVLNSIP 445
|
Length = 620 |
| >gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 335 | |||
| PLN02869 | 620 | fatty aldehyde decarbonylase | 100.0 | |
| COG3000 | 271 | ERG3 Sterol desaturase [Lipid metabolism] | 99.8 | |
| KOG0873 | 283 | consensus C-4 sterol methyl oxidase [Lipid transpo | 99.66 | |
| PF04116 | 114 | FA_hydroxylase: Fatty acid hydroxylase superfamily | 99.55 | |
| KOG0872 | 312 | consensus Sterol C5 desaturase [Lipid transport an | 99.36 | |
| KOG0874 | 287 | consensus Sphingolipid hydroxylase [Lipid transpor | 99.02 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.02 | |
| PLN02434 | 237 | fatty acid hydroxylase | 91.36 |
| >PLN02869 fatty aldehyde decarbonylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-108 Score=835.15 Aligned_cols=318 Identities=68% Similarity=1.165 Sum_probs=298.2
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhcchhhHHHHHhhhcChhhcccc--CCCCCCCCCCceecccCCchHHHHHHHHhhHH
Q 019830 1 MLPGGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSR--SHHHSSIVPEPITSVTRPFAEHITYFVLFATP 78 (335)
Q Consensus 1 ~~p~~~~lP~W~~~g~il~~LLh~~~~Df~fYW~HRalH~~~Lwr~--svHHSs~~p~p~Ta~r~HplE~ll~~~l~~iP 78 (335)
++|+++++|.|+++|+++.+++|+++.|++|||.||++|++++|++ ++||++++++|+|+.++++.|.+.+...+++|
T Consensus 112 ~~p~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IP 191 (620)
T PLN02869 112 ILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIP 191 (620)
T ss_pred hhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999666665 99999999999999854446888888888899
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHhhhccccceeccCccccccCCceEeeCCCcccC-------CC-------------
Q 019830 79 LITTALTGAGSIVPAFGYITYIDLMNNMGHCNFGLIPKWLFTIFPPLKYLMYTPSPLT-------AS------------- 138 (335)
Q Consensus 79 Ll~~~l~g~~Si~~v~~y~l~~~~~~~~gHsN~el~P~~l~~~lp~Lkyli~TPs~H~-------tN------------- 138 (335)
+++..+.+..|+.++++|+++.+++++++|||+|++|+++++.+|+++|+++||+||+ +|
T Consensus 192 Lllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdlHHs~fd~NYGlfF~~WDrLFG 271 (620)
T PLN02869 192 LLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYG 271 (620)
T ss_pred HHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhHHhccCCcCcccchHHHHhccC
Confidence 9887777777888999999999999999999999999999888899999999999999 66
Q ss_pred ---------CCCCCCCCCCCcceeEEeecCCCCcccchhhhhhhhcCCCCCcCCcchhhhhhhHHHHHHHHHHHHhccee
Q 019830 139 ---------YAAPGELLDDSLDVVYLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTF 209 (335)
Q Consensus 139 ---------~~~~~~~~~~~~D~Vflth~~~~~s~~h~~~g~~s~~s~p~~~~~~~~~l~~~~p~~~~~~~~~w~~~~~f 209 (335)
||+.+++.+++||+|||||+||++|+||+|+||||+||.|| +++||||||||+|+++|+++|+|||||
T Consensus 272 T~d~~s~~l~e~~~~~~~~~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~---~~~~~l~~~wp~~~~~m~~~w~~~~~f 348 (620)
T PLN02869 272 TMDKSSDTLYEKSLKRPEEIPDVVHLTHLTTPDSIYHLRLGFASLASKPY---ISKWYLRLMWPVTSWSMMLTWIYGRTF 348 (620)
T ss_pred CCCCCchhHHHHhhcCcccCCCEEEEeccCCHHHhhccchHHHHhccCCc---cchhHHHHHHHHHHHHHHHHHHhCCce
Confidence 44545444668999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecccCccccceEEEecCCccccccCCchhHHHHHHHHHHHHHHcCCeEEEeeccccccccccccceeeeecCCCceE
Q 019830 210 VVERNRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNPELKIK 289 (335)
Q Consensus 210 ~~~~~~~~~~~~q~w~~pr~~~~y~~~~~~~~in~~ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~~p~l~vr 289 (335)
++|+|+|||+++|||+||||||||++|+++|+||++|||||+||||+||||+|||+|||||+|||||||||+|||+||||
T Consensus 349 ~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~L~vr 428 (620)
T PLN02869 349 VLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNPKLKIK 428 (620)
T ss_pred EeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCceehhhhhccCCCCCcceeeecccccc
Q 019830 290 VVDGSSLAVAVLTNSIPAEQPKWSLEAFSLRL 321 (335)
Q Consensus 290 vv~g~~l~aavvl~~ip~~~~~~~l~~~~~~~ 321 (335)
|||||||||||||||||+|||||||||+.-.+
T Consensus 429 vv~G~tLtaAvvln~ip~~~~~vfl~G~~sK~ 460 (620)
T PLN02869 429 VVDGSSLAVAVVLNSIPKGTTQVLFRGNLSKV 460 (620)
T ss_pred EEeCCchHHHHHHHhcCCCCceEEEecCccHH
Confidence 99999999999999999999999999987654
|
|
| >COG3000 ERG3 Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
|---|
| >KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases | Back alignment and domain information |
|---|
| >KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
| >PLN02434 fatty acid hydroxylase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 335 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 7e-04
Identities = 19/140 (13%), Positives = 39/140 (27%), Gaps = 41/140 (29%)
Query: 34 LHRALHHHYLYSRSHHHSSIVPEPITSVTRPFAEHITYFVLFATPLITTALTGAGSIVPA 93
LHR++ HY ++ ++P + YF
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQ----------YF--------------------- 473
Query: 94 FGYITYIDLMN-NMGHCNFGLIPKWLFTI-FPPLKYLMYTPSPLTASYAAPGELLDDSLD 151
+ +I + L N L F K + + + A G +L+
Sbjct: 474 YSHIGH-HLKNIEHPE-RMTLFRMVFLDFRFLEQK-IRHDSTAWN----ASGSILNTLQQ 526
Query: 152 V-VYLTHLTTPESIYHMRLG 170
+ Y ++ + Y +
Sbjct: 527 LKFYKPYICDNDPKYERLVN 546
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00