Citrus Sinensis ID: 019850

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHEEcEEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEHHccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccEEEHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEccccccHEcc
Coil and Loop (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKKglkragasgtragvggytyLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIhapqehtpnSVQEIWALATQPDFLIYVAATVSVVLALVLHfeprcgqtnILVYLGICSLMGSLTVVSIKAIGIAIKLTLDgisqiaypqTWFFLTVAAVCVVTQLNYLNKALDTfnaaivspVYYVMFTTLTIIASAIMfkdwsgqdvsgiASEICGFITVLSGTIILHAtreheqttapvgtvtwyvsgdslkgaeeehlitihnsdyyvq
Flexible Loop (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKkglkragasgtragvggYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATreheqttapvgtvTWYVSGDSLkgaeeehlitihnsdyyvq
Low Complexity Region (SEG)
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYvaatvsvvlalvlHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered region (IsUnstruct)
*********LILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY***
Disordered Region (DISOPRED)
***SENSKGLILAVASSAFIGSSFILKKKGLK**************TYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEH**NSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL********************************************
Disordered Region (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKK********GTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered Region (DISPRO)
***SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH***T*PVGTVT*************EHLITIHNSD*Y*Q
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.859	0.8	0.505	1e-76
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.853	0.794	0.501	4e-76
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.853	0.794	0.501	4e-76
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.859	0.802	0.494	8e-76
Q8BMW7	416	Magnesium transporter NIP	no	no	0.940	0.757	0.467	4e-71
Q0D2K0	466	Magnesium transporter NIP	no	no	0.877	0.630	0.444	5e-68
Q8BZF2	406	Magnesium transporter NIP	no	no	0.880	0.726	0.429	3e-67
Q5RDB8	410	Magnesium transporter NIP	no	no	0.871	0.712	0.498	2e-61
Q6NVV3	410	Magnesium transporter NIP	no	no	0.871	0.712	0.491	1e-60
Q7RTP0	329	Magnesium transporter NIP	no	no	0.850	0.866	0.404	1e-53

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  286 bits (732), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 194/289 (67%), Gaps = 1/289 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G TRAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS+++SA+L+ + L ERL   G +GC+  I+GS V+VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    ++ E+      P F+++    V V L L+    PR GQTNILVY+ ICS++G+++
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVS 192

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V   K +GIAIK    G   + +P TW  L    VCV TQ+NYLN+ALD FN +IV+P+Y
Sbjct: 193 VSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
           YV FTT  I  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 253 YVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  285 bits (728), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 199/291 (68%), Gaps = 5/291 (1%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS+++SA+L+ + L ERL   G +GC+  I+GS V+VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGS 185
           E    ++ E+      P F+++  AT+ V++AL+L F   PR GQTNILVY+ ICS++G+
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVF--ATLVVIVALILIFVVGPRHGQTNILVYITICSVIGA 190

Query: 186 LTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSP 245
            +V  +K +GIAIK    G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P
Sbjct: 191 FSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTP 250

Query: 246 VYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
           +YYV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 251 IYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  285 bits (728), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 199/291 (68%), Gaps = 5/291 (1%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS+++SA+L+ + L ERL   G +GC+  I+GS V+VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGS 185
           E    ++ E+      P F+++  AT+ V++AL+L F   PR GQTNILVY+ ICS++G+
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVF--ATLVVIVALILIFVVGPRHGQTNILVYITICSVIGA 190

Query: 186 LTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSP 245
            +V  +K +GIAIK    G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P
Sbjct: 191 FSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTP 250

Query: 246 VYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
           +YYV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 251 IYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  284 bits (726), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 192/289 (66%), Gaps = 1/289 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA+ SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS+++SA+L+ + L ERL   G +GC+  I+GS V+VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    ++ E+      P F+++    V V L  +    PR GQTNILVY+ ICS++G+ +
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V  +K +GIAIK  L G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P+Y
Sbjct: 193 VSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
           YV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  268 bits (686), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 153/327 (46%), Positives = 212/327 (64%), Gaps = 12/327 (3%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LA++SS FIGSSFILKKKGL +    G TRAG GG++YL E LWWAG+++M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS++ISA+L+ + L ERL   G +GCI  ++GS V+VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQ 190

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ +
Sbjct: 191 EGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFS 250

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V S+K +GIAIK  L+       P  +  LT+ A+ V TQ+NYLNKALDTFN ++V+P+Y
Sbjct: 251 VSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTV 307
           YV FT++ +  SAI+F++W G     I   + GF T+++G  +LHA +           +
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNTN--------I 362

Query: 308 TWYVSGDSLKGAEEEHLITIHNSDYYV 334
           TW    + +  A++E L    N + YV
Sbjct: 363 TW---SELMSTAKKEALSPNGNQNSYV 386

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  258 bits (659), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 131/295 (44%), Positives = 194/295 (65%), Gaps = 1/295 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA  SS  IGSS ILKKKGL R  A+G TRA  GG+ YL + +WWAG +TM  GEVA
Sbjct: 121 GLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEVA 180

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA +VTPLGALS++ISA+L+ + L+E L  +G LGC+ C+ GS V+VIHAP+
Sbjct: 181 NFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAPE 240

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    ++ E+ +      F+++    +   L L+    PR GQ NIL+Y+ ICS++G+ +
Sbjct: 241 EEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFS 300

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V ++K +GI IK    G+  + +P  +    + A+ + TQ+N+LN+ALD FN ++V P+Y
Sbjct: 301 VAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIY 360

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 302
           YV FTT+ + +S I+FK+W       IA  + GF+T++ G  +LHA ++ + + A
Sbjct: 361 YVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCA 415

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  255 bits (652), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/298 (42%), Positives = 191/298 (64%), Gaps = 3/298 (1%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           G+ LA  S   IG+S ILKKKGL R  A+G TRA  GGY YL +P+WWAGM TM  GEVA
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA +VTPLGALS++ISA+ + + L E L  +G LGC+ C+ GS V+VIHAP+
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPK 180

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    +V E+ +      F+++    V   L L+    PR GQ NIL+Y+ ICS++GS +
Sbjct: 181 EEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFS 240

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V ++K +G+ I+    G+  + +P  +    +  + ++ Q+N+LN+ALD FN ++V P+Y
Sbjct: 241 VTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIY 300

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE--QTTAP 303
           YV FTT+ + +S ++FK+W       I   + GF+T++ G  +LHA ++ +  Q + P
Sbjct: 301 YVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLP 358

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  236 bits (602), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/293 (49%), Positives = 198/293 (67%), Gaps = 1/293 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LAV+SS FIGSSFILKKKGL +  + G TRAG GG++YL E LWW G+++M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS++ISA+L+ + L E L   G +GCI  I+GS V+VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ +
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V S+K +GIAIK  ++      +P  +  L V  + V TQ+NYLNKALDTFN +IV+P+Y
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIY 310

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
           YV FT++ +  SAI+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/293 (49%), Positives = 197/293 (67%), Gaps = 1/293 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LAV+SS FIGSSFILKKKGL +  + G TRAG GG++YL E LWW G+++M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
           NF AY +APA LVTPLGALS++ISA+L+ + L E L   G +GCI  I+GS V+VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 128 EHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLT 187
           E    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ +
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
           V S+K +GIAIK  ++      +P  +  L V  + V TQ+NYLNKALDTFN ++V+P+Y
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
           YV FT++ +  SAI+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  210 bits (535), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 178/294 (60%), Gaps = 9/294 (3%)

Query: 7   SKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEV 66
           S GL +AV SS   GS+F+L+KKG+ RA   GT       +YL + +WWAG + M VG++
Sbjct: 29  SLGLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT-------SYLTDIVWWAGTIAMAVGQI 81

Query: 67  ANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 126
            NF+AY   P VLVTPLGAL +   ++LA ++LKE+L  +G LGC+    GSVV++IH+P
Sbjct: 82  GNFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSP 141

Query: 127 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 186
           +  +  +  E+    T P F+ Y+   + ++L L+    P  G TNI+VY+ ICSL+GS 
Sbjct: 142 KSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSF 201

Query: 187 TVVSIKAIGIAIKLTL--DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVS 244
           TV S K IG+A +  L  +  SQ A       L V    ++ Q  Y+NKAL+ F++++  
Sbjct: 202 TVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFG 261

Query: 245 PVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 298
            +YYV+FTTL ++ASAI+F++WS   +       CGF TV  G +++   +E  
Sbjct: 262 AIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFN 315

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
225427938	334	PREDICTED: magnesium transporter NIPA2 [	0.997	1.0	0.874	1e-170
356544720	337	PREDICTED: magnesium transporter NIPA2-l	0.985	0.979	0.830	1e-160
388504420	334	unknown [Medicago truncatula]	0.985	0.988	0.812	1e-157
449454187	333	PREDICTED: magnesium transporter NIPA2-l	0.985	0.990	0.810	1e-157
297824951	328	hypothetical protein ARALYDRAFT_480961 [	0.973	0.993	0.799	1e-152
255574704	320	Non-imprinted in Prader-Willi/Angelman s	0.889	0.931	0.869	1e-152
30681265	328	uncharacterized protein [Arabidopsis tha	0.973	0.993	0.793	1e-152
224078113	298	predicted protein [Populus trichocarpa]	0.889	1.0	0.902	1e-147
356509533	334	PREDICTED: magnesium transporter NIPA2-l	0.988	0.991	0.768	1e-141
297801948	326	hypothetical protein ARALYDRAFT_490637 [	0.970	0.996	0.748	1e-141

>gi|225427938|ref|XP_002277315.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|297744652|emb|CBI37914.3| unnamed protein product [Vitis vinifera]

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/335 (87%), Positives = 318/335 (94%), Gaps = 1/335 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+S+N++GLILA+ASSAFIGSSFILKKKGLKRA  SGTRAGVGGYTYLLEPLWWAGMV 
Sbjct: 1   MGVSDNTRGLILAMASSAFIGSSFILKKKGLKRAADSGTRAGVGGYTYLLEPLWWAGMVL 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           MIVGEVANFVAYVYAPAVLVTPLGALSIIISA+LAHFMLKERLQKMG+LGC++CIVGSVV
Sbjct: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAILAHFMLKERLQKMGVLGCVSCIVGSVV 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAPQEHTPNSVQEIWALATQP FLIYVAAT+S VLAL+L+FEPR GQTNILVYLGIC
Sbjct: 121 IVIHAPQEHTPNSVQEIWALATQPAFLIYVAATLSAVLALILYFEPRYGQTNILVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SLMGSLTVVSIKAIGIAIKLTL+GISQ+AYPQTWFFLTVAAVCV+TQLNYLNKALDTFNA
Sbjct: 181 SLMGSLTVVSIKAIGIAIKLTLEGISQVAYPQTWFFLTVAAVCVITQLNYLNKALDTFNA 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
           AIVSP+YYVMFTTLTI ASAIMFKDWSGQ+ S IASEICGFITVLSGTIILHATRE E  
Sbjct: 241 AIVSPIYYVMFTTLTISASAIMFKDWSGQNASSIASEICGFITVLSGTIILHATREQEPA 300

Query: 301 TAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ 335
           TA  GT+TWY+SGD++KG E+EH IT+H+SDY+ Q
Sbjct: 301 TAS-GTITWYLSGDAMKGVEDEHFITLHHSDYFEQ 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544720|ref|XP_003540795.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 275/331 (83%), Positives = 303/331 (91%), Gaps = 1/331 (0%)

Query: 2   GLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTM 61
           G+S+N KGLILA+ SSAFIGSSFILKKKGLKRA A GTRAGVGGYTYLLEPLWWAGMVTM
Sbjct: 5   GVSDNFKGLILAMGSSAFIGSSFILKKKGLKRAAARGTRAGVGGYTYLLEPLWWAGMVTM 64

Query: 62  IVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI 121
           I+GE+ANFVAY+YAPAVLVTPLGALSII+SAVL+HF+LKERL KMG+LGC++CIVGS+VI
Sbjct: 65  IIGEIANFVAYIYAPAVLVTPLGALSIIVSAVLSHFLLKERLPKMGVLGCVSCIVGSIVI 124

Query: 122 VIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICS 181
           VIHAPQE TP+SVQEIW LATQP FL YV ATVSVVLAL++HFEPR GQTN+LVYLGICS
Sbjct: 125 VIHAPQEQTPSSVQEIWDLATQPAFLFYVMATVSVVLALIVHFEPRYGQTNMLVYLGICS 184

Query: 182 LMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAA 241
           L+GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFNA 
Sbjct: 185 LVGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVATICVITQLNYLNRALDTFNAT 244

Query: 242 IVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 301
           IVSPVYYVMFTTLTIIASAIMFKDWSGQDVS IASEICGFITVL+GTIILH TRE E++ 
Sbjct: 245 IVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSIASEICGFITVLTGTIILHMTREQEESN 304

Query: 302 APVGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
               T TW++  D +KG E EHLI IH+SDY
Sbjct: 305 MQ-KTSTWFIGEDLMKGVENEHLIRIHDSDY 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504420|gb|AFK40276.1| unknown [Medicago truncatula]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/331 (81%), Positives = 303/331 (91%), Gaps = 1/331 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+SEN KGLILAV SS FIG+SFILKKKGLKRA + GTRAGVGGYTYLLEPLWW GMVT
Sbjct: 1   MGVSENYKGLILAVCSSGFIGASFILKKKGLKRAASRGTRAGVGGYTYLLEPLWWVGMVT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           MI GE ANFVAY+YAPAVLVTPLGALSII+S+VLAHF+LKERLQKMG+LGC++CIVGS+V
Sbjct: 61  MITGEAANFVAYIYAPAVLVTPLGALSIIVSSVLAHFLLKERLQKMGVLGCLSCIVGSIV 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAPQEHTPNSVQEIW LATQP+F+IY AATVSVVLAL+L+FEPR GQ N+LVYLGIC
Sbjct: 121 IVIHAPQEHTPNSVQEIWELATQPEFMIYAAATVSVVLALILNFEPRYGQKNMLVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SLMGSLTV+SIKAIGIAIKLTLDGI+QIAYPQTWFF+ VA++CVVTQLNYLNKALDTF+A
Sbjct: 181 SLMGSLTVMSIKAIGIAIKLTLDGINQIAYPQTWFFVIVASICVVTQLNYLNKALDTFDA 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
            IV+PVYYVMFTTLTI+ASAIMFKDWSGQDVS +ASEICGFITVL+GTIILH T+E E+ 
Sbjct: 241 TIVTPVYYVMFTTLTIVASAIMFKDWSGQDVSSVASEICGFITVLTGTIILHGTKEQEEF 300

Query: 301 TAPVGTVTWYVSGDSLKGAEEEHLITIHNSD 331
           T   GT++W++S DS K  E+EHLI I+  D
Sbjct: 301 TRK-GTMSWFMSEDSTKCVEDEHLIVINGPD 330

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454187|ref|XP_004144837.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus] gi|449510408|ref|XP_004163655.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/332 (81%), Positives = 307/332 (92%), Gaps = 2/332 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           M +SENSKGLILA+ASSAFIGSSFILKKKGLKRAGA+G RAGVGGYTYLLEPLWWAGM+T
Sbjct: 1   MTISENSKGLILAMASSAFIGSSFILKKKGLKRAGATGARAGVGGYTYLLEPLWWAGMIT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           MI+GE+ANFVAY+YAPAVLVTPLGALSII+SAVLAHF+LKERLQKMG++GC++CIVGSV+
Sbjct: 61  MIIGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKERLQKMGVVGCLSCIVGSVI 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAPQEHTP+SV+EIW LATQP FL+Y+AA  S+VLAL+L+FEPR G  NILVYLGIC
Sbjct: 121 IVIHAPQEHTPDSVEEIWDLATQPAFLVYIAAIASLVLALMLYFEPRYGHVNILVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SLMGSLTV+SIKAIGIAI+LTL+GISQ+AYPQTW F+TVA VCV+TQLNYLNKALDTFNA
Sbjct: 181 SLMGSLTVMSIKAIGIAIRLTLEGISQVAYPQTWLFVTVAVVCVITQLNYLNKALDTFNA 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
           A+VSPVYY MFTTLTIIASAIMFKDWSGQ+ S I SE+CGF+TVLSGTIILH+TRE +Q 
Sbjct: 241 ALVSPVYYAMFTTLTIIASAIMFKDWSGQNASTIVSELCGFVTVLSGTIILHSTRE-QQP 299

Query: 301 TAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
            +  G+V WY+SGDS+K + EEHLITI NS Y
Sbjct: 300 VSSQGSVAWYISGDSMK-SFEEHLITISNSHY 330

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824951|ref|XP_002880358.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata] gi|297326197|gb|EFH56617.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/329 (79%), Positives = 294/329 (89%), Gaps = 3/329 (0%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           S+N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct: 3   SDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
           GE ANFVAY+YAPAVLVTPLGALSIIISAVLAHF+LKE+L+KMG+LGC++CIVGSVVIVI
Sbjct: 63  GEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVI 122

Query: 124 HAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLM 183
           HAP+E TPNSV+EIW LATQP FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSLM
Sbjct: 123 HAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLM 182

Query: 184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
           G+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIV
Sbjct: 183 GALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIV 242

Query: 244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 303
           SPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A 
Sbjct: 243 SPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQAS 302

Query: 304 VGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
              V WY   DS K   EEHLI++++ +Y
Sbjct: 303 SEQVRWY---DSRKSMNEEHLISLYSPEY 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574704|ref|XP_002528260.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223532297|gb|EEF34098.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/298 (86%), Positives = 285/298 (95%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+S+NSKGLILAVASSAFIGSSFILKKKGLKRAGA+GTRAGVGGYTYLLEPLWWAGM+T
Sbjct: 1   MGVSDNSKGLILAVASSAFIGSSFILKKKGLKRAGATGTRAGVGGYTYLLEPLWWAGMIT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           M VGEVANFVAYVYAPA LVTPLGALSIIISA+LAHFML+ERLQKMG++GC++CIVGSVV
Sbjct: 61  MFVGEVANFVAYVYAPAFLVTPLGALSIIISAILAHFMLRERLQKMGVVGCVSCIVGSVV 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAP+EHTP+SVQE+W LATQP FLIYVAA++S+VL L+LHFEPRCGQTN+LVYLGIC
Sbjct: 121 IVIHAPEEHTPSSVQEVWTLATQPAFLIYVAASLSMVLVLILHFEPRCGQTNMLVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SL+GS+TVVSIKAIGIAIKLTL+G SQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFNA
Sbjct: 181 SLIGSITVVSIKAIGIAIKLTLEGTSQIAYPQTWFFLTVAVICVITQLNYLNRALDTFNA 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 298
            IVSPVYYVMFTTLTI+ASAIMFKDWSGQ+ S I SEICGFITVLSGTIILHATR  E
Sbjct: 241 TIVSPVYYVMFTTLTIVASAIMFKDWSGQNASSITSEICGFITVLSGTIILHATRGQE 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681265|ref|NP_179708.2| uncharacterized protein [Arabidopsis thaliana] gi|26452186|dbj|BAC43181.1| unknown protein [Arabidopsis thaliana] gi|109946593|gb|ABG48475.1| At2g21120 [Arabidopsis thaliana] gi|330252031|gb|AEC07125.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/329 (79%), Positives = 294/329 (89%), Gaps = 3/329 (0%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           ++N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct: 3   TDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
           GE ANFVAY+YAPAVLVTPLGALSIIISAVLAHF+LKE+L+KMG+LGC++CIVGSVVIVI
Sbjct: 63  GEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVI 122

Query: 124 HAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLM 183
           HAP+E TPNSV+EIW LATQP FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSLM
Sbjct: 123 HAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLM 182

Query: 184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
           G+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIV
Sbjct: 183 GALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIV 242

Query: 244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 303
           SPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A 
Sbjct: 243 SPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQAS 302

Query: 304 VGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
              V WY   DS K   EEHL+++++ +Y
Sbjct: 303 SEHVRWY---DSRKSMNEEHLVSLYSPEY 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078113|ref|XP_002305489.1| predicted protein [Populus trichocarpa] gi|222848453|gb|EEE86000.1| predicted protein [Populus trichocarpa]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/298 (90%), Positives = 291/298 (97%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+SENS+GLILAVASSAFIG+SFILKKKGLKRAGA+GTRAGVGGYTYLLEPLWWAGMVT
Sbjct: 1   MGVSENSRGLILAVASSAFIGASFILKKKGLKRAGANGTRAGVGGYTYLLEPLWWAGMVT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           MIVGE+ANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMG++GC++C+VGSVV
Sbjct: 61  MIVGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGVVGCVSCVVGSVV 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAPQEHTP+SVQEIW LATQ  FLIYV AT+SVVLAL+L+FEPRCGQTNILVYLGIC
Sbjct: 121 IVIHAPQEHTPSSVQEIWTLATQTAFLIYVVATLSVVLALILYFEPRCGQTNILVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SLMGS+TVVSIKAIGIAIKLTL+GI+QIAYPQTWFFL+VA +CV+TQLNYLN+ALDTFNA
Sbjct: 181 SLMGSITVVSIKAIGIAIKLTLEGINQIAYPQTWFFLSVAVICVITQLNYLNRALDTFNA 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 298
           AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVS IASE+CGFITVLSGTIILHATRE E
Sbjct: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSIASELCGFITVLSGTIILHATREQE 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509533|ref|XP_003523502.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/332 (76%), Positives = 292/332 (87%), Gaps = 1/332 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG++ENSKGL+LAVAS  FIG+SF+LKKKGLK+A   GTRAGVGGY+YLL+PLWWAGM+T
Sbjct: 1   MGIAENSKGLVLAVASGVFIGASFVLKKKGLKQAATHGTRAGVGGYSYLLQPLWWAGMLT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV 120
           M++GEVANFVAY+YAPA+LVTPLGALSII+SAVLAHF+LKE+LQKMGILGC+ CIVGSV+
Sbjct: 61  MLIGEVANFVAYIYAPALLVTPLGALSIIVSAVLAHFLLKEKLQKMGILGCVFCIVGSVL 120

Query: 121 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 180
           IVIHAPQEH  NSVQEIW LATQP FL+YVAA VSVVLAL+LHFEPR GQTN+LVYLGIC
Sbjct: 121 IVIHAPQEHALNSVQEIWDLATQPLFLVYVAAAVSVVLALILHFEPRYGQTNMLVYLGIC 180

Query: 181 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 240
           SL+GSL V+S KAIGIAIKLTL+G SQ+ YPQTWFFLTV  +C++TQLNYLNKALDTFN 
Sbjct: 181 SLIGSLLVMSTKAIGIAIKLTLEGTSQLTYPQTWFFLTVTVICIITQLNYLNKALDTFNT 240

Query: 241 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 300
           AIVSPVYYVMFTTLTIIAS IMFKDWS Q    IASEICGF+ VLSGTI+LHATRE EQ+
Sbjct: 241 AIVSPVYYVMFTTLTIIASVIMFKDWSEQSAGSIASEICGFVIVLSGTILLHATREQEQS 300

Query: 301 TAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
               G++TWY+  D +K  E+ HL  +H SDY
Sbjct: 301 NKQ-GSLTWYIGEDLVKRIEDGHLNLLHGSDY 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801948|ref|XP_002868858.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata] gi|297314694|gb|EFH45117.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 247/330 (74%), Positives = 286/330 (86%), Gaps = 5/330 (1%)

Query: 3   LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMI 62
           +S+N  GL LAV+SS FIGSSFILKKKGLKRA A+GTRAG GGYTYLLEPLWW G+VTM 
Sbjct: 2   VSDNEMGLALAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMT 61

Query: 63  VGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV 122
            GE+ANFVAYVYAPAVLVTPLGALSIIISAVLAHF+L E+L+KMG+ GC+ CIVGSV+IV
Sbjct: 62  FGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIV 121

Query: 123 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSL 182
           IHAPQE TPNSV+EIW LA QP FLIYVA ++S+VLAL+L+ EP CGQTNILVY+GICSL
Sbjct: 122 IHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSL 181

Query: 183 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 242
           MGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF  VAA+CVV Q+ YLNKALDTFNAAI
Sbjct: 182 MGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAIVAAICVVMQMIYLNKALDTFNAAI 241

Query: 243 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 302
           VSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASEICGFITVL+GT+ILHATRE EQ  A
Sbjct: 242 VSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHATREEEQ--A 299

Query: 303 PVGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
             G + W  SG S    +EEHL ++++ +Y
Sbjct: 300 SPGRMRWQDSGKSF---DEEHLTSLYSPEY 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.973	0.993	0.765	6.9e-134
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.970	0.996	0.718	8.9e-125
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.907	0.826	0.608	3.6e-105
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.874	0.854	0.638	1.4e-103
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.907	0.907	0.625	2.9e-103
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.874	0.759	0.634	9.8e-103
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.907	0.904	0.601	4.9e-101
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.856	0.779	0.5	3.6e-73
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.856	0.779	0.5	3.6e-73
UNIPROTKB|J9NXM0	413	NIPAL1 "Uncharacterized protei	0.958	0.777	0.462	4.1e-72

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
 Identities = 252/329 (76%), Positives = 282/329 (85%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             ++N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct:     3 TDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
             GE ANFVAY+YAPAVLVTPLGALSIIISAVLAHF+LKE+L+KMG+LGC++CIVGSVVIVI
Sbjct:    63 GEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVI 122

Query:   124 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 183
             HAP+E TPNSV+EIW LATQP FLIY             HFEP CGQTNILVY+GICSLM
Sbjct:   123 HAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLM 182

Query:   184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
             G+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIV
Sbjct:   183 GALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIV 242

Query:   244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 303
             SPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A 
Sbjct:   243 SPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQAS 302

Query:   304 VGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
                V WY   DS K   EEHL+++++ +Y
Sbjct:   303 SEHVRWY---DSRKSMNEEHLVSLYSPEY 328

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 237/330 (71%), Positives = 275/330 (83%)

Query:     3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMI 62
             +S+N  GL+LAV+SS FIGSSFILKKKGLKRA A+GTRAG GGYTYLLEPLWW G+VTM 
Sbjct:     2 VSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMT 61

Query:    63 VGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV 122
              GE+ANFVAYVYAPAVLVTPLGALSIIISAVLAHF+L E+L+KMG+ GC+ CIVGSV+IV
Sbjct:    62 FGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIV 121

Query:   123 IHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSL 182
             IHAPQE TPNSV+EIW LA QP FLIY             + EP CGQTNILVY+GICSL
Sbjct:   122 IHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSL 181

Query:   183 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 242
             MGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF  VAA+CVV Q+ YLNKALDTFNAAI
Sbjct:   182 MGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAI 241

Query:   243 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 302
             VSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASEICGFITVL+GT+ILH+TRE EQ + 
Sbjct:   242 VSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQAS- 300

Query:   303 PVGTVTWYVSGDSLKGAEEEHLITIHNSDY 332
             P   + W  SG S    +EEHL ++++ +Y
Sbjct:   301 P-RRMRWQDSGKSF---DEEHLTSLYSPEY 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 185/304 (60%), Positives = 243/304 (79%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLKRAGASG RAG GGY+YLLEPLWW GM+TMIV
Sbjct:    17 SDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIV 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
             GE+ANF AY +APA+LVTPLGALSIIISA LAH +L E+L   G+LGC+ C+VGS+ IV+
Sbjct:    77 GEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITIVL 136

Query:   124 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 183
             HAPQE   +SV ++W LAT+P FL+Y              F P+ GQ++++VY+G+CSL+
Sbjct:   137 HAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCSLV 196

Query:   184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
             GSL+V+S+KA+GIA+KLT  G++Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+V
Sbjct:   197 GSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTAVV 256

Query:   244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 303
             SP+YYVMFT+LTI+AS IMFKDW  QD + I +E+CGF+T+LSGT +LH T++    ++ 
Sbjct:   257 SPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVDGSSS 316

Query:   304 VGTV 307
             +G +
Sbjct:   317 LGNL 320

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
 Identities = 187/293 (63%), Positives = 235/293 (80%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLK+A ++GTRAGVGGY+YL EPLWW GM TM++
Sbjct:    17 SDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTMLL 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
             GE+ANF AY +APA+LVTPLGA+SIIISAVLAH +L+E+L   GILGC  C+VGS  IV+
Sbjct:    77 GEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTIVL 136

Query:   124 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 183
             HAPQE   +SV E+W LAT+P F+ Y              F P+ GQTN++VY+GICSL+
Sbjct:   137 HAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICSLV 196

Query:   184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
             GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F  V   CVVTQLNYLNKALDTFN AIV
Sbjct:   197 GSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAIV 256

Query:   244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
             SP+YYVMFT+LTI+AS IMFKDW  Q+ + I +EICGF+T+LSGT +LH T++
Sbjct:   257 SPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
 Identities = 190/304 (62%), Positives = 235/304 (77%)

Query:     5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVG 64
             +N  G+ILAV+SS FIGSSFI+KKKGLK+AGASG RAG GGY YL EP WWAGM+TMIVG
Sbjct:     7 DNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMITMIVG 66

Query:    65 EVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH 124
             EVANF AY +APA+LVTPLGALSII SAVLAHF+LKE+L   GILGCI C+VGS  IV+H
Sbjct:    67 EVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTIVLH 126

Query:   125 APQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMG 184
             AP E    SV++IW LA +P FL+Y             ++EPR G+T+++VY+GICSLMG
Sbjct:   127 APHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICSLMG 186

Query:   185 SLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVS 244
             SLTV+S+KA+ IAIKLT  G +Q  Y  TW F+ V A C + Q+NYLNKALDTFN A++S
Sbjct:   187 SLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTAVIS 246

Query:   245 PVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPV 304
             PVYYVMFTT TIIAS IMFKDW+ Q    IA+E+CGF+T+LSGT +LH T++   + +  
Sbjct:   247 PVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSASGR 306

Query:   305 GTVT 308
             G+++
Sbjct:   307 GSIS 310

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
 Identities = 186/293 (63%), Positives = 232/293 (79%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLK+AGASG RAG GGY+YLLEPLWW GM+TMIV
Sbjct:    17 SDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITMIV 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
             GE+ANF AY +APA+LVTPLGALSIIISA LAH +L+E+L   GILGC  CIVGSV IV+
Sbjct:    77 GEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTIVL 136

Query:   124 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 183
             HAPQE    SV E+W LAT+P FL Y              F P  GQ++++VY+G+CSL+
Sbjct:   137 HAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCSLI 196

Query:   184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
             GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+V
Sbjct:   197 GSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTAVV 256

Query:   244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 296
             SP+YYVMFT+LTI+AS IMFKDW  Q  + I +E+CGF+T+LSGT +LH T +
Sbjct:   257 SPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 183/304 (60%), Positives = 233/304 (76%)

Query:     5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVG 64
             +N  G+ILAV+SS FIGSSFI+KKKGLK+AG SG RAG GGY YL EP WWAGM+TMIVG
Sbjct:     7 DNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITMIVG 66

Query:    65 EVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH 124
             E+ANF AY +APA+LVTPLGALSII SAVLAHF+L+E+L   GILGC+ C+VGS  IV+H
Sbjct:    67 EIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTIVLH 126

Query:   125 APQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMG 184
             AP E    SV+++W LAT+P FL Y             ++EPR G+T+++VY+GICSLMG
Sbjct:   127 APHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICSLMG 186

Query:   185 SLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVS 244
             SLTV+S+KA+ IAIKLT  G++Q  Y   W F+ V  +C + Q+NYLNKALD FN A++S
Sbjct:   187 SLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVIS 246

Query:   245 PVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPV 304
             PVYYVMFTT TI+AS IMFKDW+ Q    IA+E+CGF+T+LSGT +LH T++   +T+  
Sbjct:   247 PVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNSTSLR 306

Query:   305 GTVT 308
             G+ +
Sbjct:   307 GSTS 310

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 144/288 (50%), Positives = 194/288 (67%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGA-SGTRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL LA++SS  IG+SFI+ KKGL  A A +G   GV    YL  P+WW GM+TM +GE+A
Sbjct:     7 GLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEIA 66

Query:    68 NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
             NF AY +APA+LVTPLGALS+II AVLA   LKERL  +G +GC  C++GSV+I++HAP 
Sbjct:    67 NFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAPP 126

Query:   128 EHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLT 187
             +    +V EI   ATQP F+ Y                P+ G TN ++YL ICS +GS++
Sbjct:   127 DKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSIS 186

Query:   188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
             V+SIKA GIA+KLTL G +Q  +  T+ FL V A+C+VTQ+NY NKALD F+ +IV+P+Y
Sbjct:   187 VMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPLY 246

Query:   248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR 295
             YV FTT T+ AS I+FK ++      I S + GF+ + SG  +L+ +R
Sbjct:   247 YVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 144/288 (50%), Positives = 194/288 (67%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGA-SGTRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL LA++SS  IG+SFI+ KKGL  A A +G   GV    YL  P+WW GM+TM +GE+A
Sbjct:     7 GLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEIA 66

Query:    68 NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
             NF AY +APA+LVTPLGALS+II AVLA   LKERL  +G +GC  C++GSV+I++HAP 
Sbjct:    67 NFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAPP 126

Query:   128 EHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLT 187
             +    +V EI   ATQP F+ Y                P+ G TN ++YL ICS +GS++
Sbjct:   127 DKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSIS 186

Query:   188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
             V+SIKA GIA+KLTL G +Q  +  T+ FL V A+C+VTQ+NY NKALD F+ +IV+P+Y
Sbjct:   187 VMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPLY 246

Query:   248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR 295
             YV FTT T+ AS I+FK ++      I S + GF+ + SG  +L+ +R
Sbjct:   247 YVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISR 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|J9NXM0 NIPAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 150/324 (46%), Positives = 209/324 (64%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL LAV+SS FIGSSFILKKKGL +    G TRAG GG++YL E LWWAG+++M  GE A
Sbjct:    71 GLGLAVSSSIFIGSSFILKKKGLLQLAKKGVTRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query:    68 NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ 127
             NF AY +APA LVTPLGALS++ISA+L+ + L E L   G +GCI  I+GS V+VIHAPQ
Sbjct:   131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query:   128 EHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLT 187
             E    S+ E+      P F+ +                P+ GQTNILVY+ ICSL+G+ +
Sbjct:   191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query:   188 VVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 247
             V S+K +GIAIK  L+      +P  +  L V  + V+TQ+NYLNKALDTFN A+V+P+Y
Sbjct:   251 VSSVKGLGIAIKELLEWKPIYKHPLVFVLLAVLVLSVMTQINYLNKALDTFNTALVTPIY 310

Query:   248 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTV 307
             YV FT++ +  S I+F++W G     I   + GF T+++G  +LHA +  + T + + T 
Sbjct:   311 YVFFTSMVVTCSVILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKHTDITWSDL-TS 369

Query:   308 TWYVSGDSLKGAEEEHLITIHNSD 331
             T      SL G E+++++ + N++
Sbjct:   370 TTQKEVLSLNGNEDKYVL-LENTE 392

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.5051	0.8597	0.8	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.5017	0.8537	0.7944	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.5017	0.8537	0.7944	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4948	0.8597	0.8022	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-152

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  429 bits (1106), Expect = e-152
 Identities = 194/298 (65%), Positives = 227/298 (76%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           ++N  GLILAV+SS FIGSSFI+KKKGL R    G RAG GGY YL E LWWAG++TMIV
Sbjct: 3   TDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 123
           GE ANF AY +APA LVTPLGALS+IISAVL+ F L E+L   G LGC+ CIVGS VIVI
Sbjct: 63  GEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVIVI 122

Query: 124 HAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLM 183
           HAP+E    SV+E+W LAT P FL+YV   V VVL L+   EPR GQTNILVY+ ICSL+
Sbjct: 123 HAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICSLI 182

Query: 184 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 243
           GSLTV+S+KA+GIAIKLT  G +Q+ YPQ W FL V   CVVTQ+NYLNKALD FN +IV
Sbjct: 183 GSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTSIV 242

Query: 244 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 301
           +PVYYV FTT  I ASAI+FK+W GQ    IA E+CGF T+L GT +LHATR+ E + 
Sbjct: 243 TPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFSQ 300

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.19
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.06
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.98
PRK15430	296	putative chloramphenical resistance permease RarD;	98.9
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.88
PLN00411	358	nodulin MtN21 family protein; Provisional	98.88
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.82
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.8
PRK11272	292	putative DMT superfamily transporter inner membran	98.77
PRK11689	295	aromatic amino acid exporter; Provisional	98.77
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.76
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.72
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.6
COG2510	140	Predicted membrane protein [Function unknown]	98.6
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.54
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.44
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.27
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.23
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.17
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.15
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.02
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.97
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.86
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.71
PRK13499	345	rhamnose-proton symporter; Provisional	97.68
PLN00411	358	nodulin MtN21 family protein; Provisional	97.68
PRK11689	295	aromatic amino acid exporter; Provisional	97.58
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.56
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.53
PRK11272	292	putative DMT superfamily transporter inner membran	97.48
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.46
PRK11431	105	multidrug efflux system protein; Provisional	97.43
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.35
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.25
COG2076	106	EmrE Membrane transporters of cations and cationic	97.23
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.11
COG2510	140	Predicted membrane protein [Function unknown]	97.08
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.03
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.8
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.75
PRK11431	105	multidrug efflux system protein; Provisional	96.68
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.46
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.42
COG2076	106	EmrE Membrane transporters of cations and cationic	96.36
COG2962	293	RarD Predicted permeases [General function predict	96.33
KOG2765	416	consensus Predicted membrane protein [Function unk	96.31
PRK15430	296	putative chloramphenical resistance permease RarD;	95.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.86
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.84
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.75
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.23
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.09
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.03
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.01
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.56
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.29
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	93.53
KOG2766	336	consensus Predicted membrane protein [Function unk	93.27
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	91.66
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	91.3
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.98
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	89.89
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	89.36
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.33
KOG4831	125	consensus Unnamed protein [Function unknown]	88.56
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	88.06
COG1742	109	Uncharacterized conserved protein [Function unknow	87.36
KOG1580	337	consensus UDP-galactose transporter related protei	87.35
PRK02237	109	hypothetical protein; Provisional	85.07
PRK13499	345	rhamnose-proton symporter; Provisional	83.42

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=5.1e-63  Score=472.44  Aligned_cols=299  Identities=46%  Similarity=0.807  Sum_probs=284.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhc
Q 019850            3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTP   82 (335)
Q Consensus         3 ~~~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~P   82 (335)
                      .+++++|+++|++||++++.|.++|||++.|.++++.|++.+.++|+|||+||.|+.++++|++++++||+++|+++|||
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~P   81 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAP   81 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHH
Confidence            36899999999999999999999999999998876555544567999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHHHHHHhh
Q 019850           83 LGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVL  162 (335)
Q Consensus        83 l~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v~~~l~~  162 (335)
                      ++++++++|++++++++|||++++|++|+++++.|+++++.++|++++.+|++|+.+++++|.|+.|+++..++.+.+++
T Consensus        82 lg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~  161 (300)
T PF05653_consen   82 LGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILIF  161 (300)
T ss_pred             HHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988887777777


Q ss_pred             eecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 019850          163 HFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI  242 (335)
Q Consensus       163 ~~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~  242 (335)
                      +..+|+++++...|.++|+++|+++++++|++++.++++++|++||++|.+|++++.+++|++.|++|||+||++||++.
T Consensus       162 ~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~  241 (300)
T PF05653_consen  162 FIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSL  241 (300)
T ss_pred             hhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceE
Confidence            78889899999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCCcCCC
Q 019850          243 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT  301 (335)
Q Consensus       243 v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~  301 (335)
                      ++|++|++||++++++|.++|||+.+++++++.++.+|+.+++.||++|++++|+++.|
T Consensus       242 V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~~  300 (300)
T PF05653_consen  242 VVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEISQ  300 (300)
T ss_pred             EEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhccC
Confidence            99999999999999999999999999999999999999999999999999999988754

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-63  Score=468.10  Aligned_cols=303  Identities=66%  Similarity=1.124  Sum_probs=293.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhc
Q 019850            3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTP   82 (335)
Q Consensus         3 ~~~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~P   82 (335)
                      .+++++|+.+|+.|+++++.++++|||+++|....+.|++.+..+|++.|+||+|++.|++|+++||+||+|+|+++|+|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLVtP   95 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLVTP   95 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhhcc
Confidence            46889999999999999999999999999998887778877789999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHHHHHHhh
Q 019850           83 LGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVL  162 (335)
Q Consensus        83 l~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v~~~l~~  162 (335)
                      |+++++++++++|++++||+++..+.+|++++++|.++++.++|++++..|++|+++++++|+|++|+++.+++++++++
T Consensus        96 LGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~~  175 (335)
T KOG2922|consen   96 LGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILIF  175 (335)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHhe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998888889


Q ss_pred             eecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 019850          163 HFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI  242 (335)
Q Consensus       163 ~~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~  242 (335)
                      +..||++++++++|.++|+++|++|+++.|+++++++++++|++|+.+|.+|.++...+.|+..|++||||||+.||++.
T Consensus       176 ~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntsl  255 (335)
T KOG2922|consen  176 FYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSI  255 (335)
T ss_pred             eecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCCcCCCCCCC
Q 019850          243 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVG  305 (335)
Q Consensus       243 v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~~~~~  305 (335)
                      +.|++|++||+.++++|.|+|+||++.+..+...+++|+..++.|+++|.+.+|.+.......
T Consensus       256 V~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s~~  318 (335)
T KOG2922|consen  256 VSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLASYN  318 (335)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccccc
Confidence            999999999999999999999999999999999999999999999999999999987655533

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.25  E-value=1.6e-09  Score=102.35  Aligned_cols=252  Identities=18%  Similarity=0.183  Sum_probs=145.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhccC-C-----------C----c-cCCcccccccchhH---HHHHHHHHHHHHHH
Q 019850            9 GLILAVASSAFIGSSFILKKKGLKRAGAS-G-----------T----R-AGVGGYTYLLEPLW---WAGMVTMIVGEVAN   68 (335)
Q Consensus         9 GvllAl~sa~~~a~g~vlqk~~~~~~~~~-~-----------~----~-~~~~~~~~~~~p~w---~~G~~l~~~g~~~~   68 (335)
                      ..++.+.++++.+...++.|+...+.+.- .           +    + .+. ..+..++..|   ..+.........+.
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQV-GWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccC-CCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999765442210 0           0    0 000 0111122222   12333345666788


Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCchhhH
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLI  148 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~fl~  148 (335)
                      ..++...|.+..+|+...+.+++.+++.+++|||+++++|.|+.++..|+.++..  ++.+. .+          +....
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~----------~~g~~  147 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HR----------RKAYA  147 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cc----------hhHHH
Confidence            8899999999999999999999999999999999999999999999999876643  22211 11          11111


Q ss_pred             HHHHHHHHHHHHhhe-ecccCCCc-----hhHHHHHHHHhhhHH-HHHHHHHHHHHHHHhhcCCCc-chhhHHHHHHHHH
Q 019850          149 YVAATVSVVLALVLH-FEPRCGQT-----NILVYLGICSLMGSL-TVVSIKAIGIAIKLTLDGISQ-IAYPQTWFFLTVA  220 (335)
Q Consensus       149 y~~~~~~v~~~l~~~-~~~r~~~~-----~~~~~~~i~gllgg~-svl~~K~v~~~l~~~~~g~~~-f~~~~~y~~l~~~  220 (335)
                      +..+..+  +...+. ..+|..++     ....+...+..+++. .....     ..+   ++... ...+..+.++...
T Consensus       148 ~~l~aal--~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~  217 (281)
T TIGR03340       148 WALAAAL--GTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-----LKR---HGRSMFPYARQILPSATLG  217 (281)
T ss_pred             HHHHHHH--HHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-----HHH---hccchhhhHHHHHHHHHHH
Confidence            2221111  111121 22222111     111122222222211 11100     000   11111 1222223333334


Q ss_pred             HHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhh
Q 019850          221 AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  291 (335)
Q Consensus       221 ~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lL  291 (335)
                      .++......+.++++++.+++.+.+..+. .|+++++.|.++++|..+  +.    ...|.++++.|+++|
T Consensus       218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~--~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       218 GLMIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY--LT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc--HH----HHHHHHHHHHhHHhC
Confidence            44444455678899999999888888766 589999999999999643  33    446777788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.19  E-value=8.7e-11  Score=99.46  Aligned_cols=115  Identities=17%  Similarity=0.165  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCccC-Ccccccccch--hHHHHHHHHHHHHHHHHHHHhhcchhhhhchh
Q 019850            8 KGLILAVASSAFIGSSFILKKKGLKRAGASGTRAG-VGGYTYLLEP--LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG   84 (335)
Q Consensus         8 iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~-~~~~~~~~~p--~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~   84 (335)
                      +|.++.+.+.++.+.||++.|+|+.+.++.+.... ........+|  +-+.|+.++++++.+|..+++..|++...|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            47788999999999999999999988664221110 0012335567  78899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHH--HhccccccchhHHHHHHhhheeeEE
Q 019850           85 ALSIIISAVLAHF--MLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        85 ~~~lv~~~~la~~--~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      +...++..+.+..  ++||++|.++++|+++|++|+.++.
T Consensus        82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            9999888888885  7999999999999999999988764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.06  E-value=6.5e-08  Score=94.16  Aligned_cols=238  Identities=20%  Similarity=0.243  Sum_probs=135.6

Q ss_pred             ccccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEe
Q 019850           47 TYLLEPLWWAGM--VTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  124 (335)
Q Consensus        47 ~~~~~p~w~~G~--~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~  124 (335)
                      +..++|+|.-=+  ++++.++-+...|+.+.+.+-+|=+.+.+++++++++.+++|||.++.+++|++++++|+++++..
T Consensus        73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            345555554433  336788889999999999999999999999999999999999999999999999999998887655


Q ss_pred             cCCCCCCC-CHHHHHHHhcCchhhHHHHHHHHHHHHHhh-eecc-cCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q 019850          125 APQEHTPN-SVQEIWALATQPDFLIYVAATVSVVLALVL-HFEP-RCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT  201 (335)
Q Consensus       125 ~~~~~~~~-t~~el~~~~~~~~fl~y~~~~~~v~~~l~~-~~~~-r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~  201 (335)
                      ....++.. +.+       +|..--.+++... .+.-+. ...+ .-++.+...+.+--|++|..-.. .....  +.  
T Consensus       153 D~~~~~~~~~~~-------~~i~GDll~l~~a-~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~-iq~~i--le--  219 (334)
T PF06027_consen  153 DVLSGSDSSSGS-------NPILGDLLALLGA-ILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISG-IQLAI--LE--  219 (334)
T ss_pred             cccccccCCCCC-------ccchhHHHHHHHH-HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH-HHHHh--ee--
Confidence            43222111 111       1111111111111 111111 1111 11122233344444444432111 11111  10  


Q ss_pred             hcCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHH
Q 019850          202 LDGISQI-AYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICG  280 (335)
Q Consensus       202 ~~g~~~f-~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G  280 (335)
                      .++-..+ -++....+++....+...=-...+-.++..+++.+.--+ ..-..-+++.++.+|++.  .++    ++..|
T Consensus       220 ~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~f~~~--~~~----ly~~a  292 (334)
T PF06027_consen  220 RSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFFFGYK--FSW----LYILA  292 (334)
T ss_pred             hhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHhcCcc--ccH----HHHHH
Confidence            0111111 134444444444444332222344567777776554443 444555888899999984  323    47788


Q ss_pred             HHHHHHHHhhhccccCCcCCCCCC
Q 019850          281 FITVLSGTIILHATREHEQTTAPV  304 (335)
Q Consensus       281 ~~l~i~Gv~lLs~~~~~~~~~~~~  304 (335)
                      +++++.|.++...+++++.+++..
T Consensus       293 f~lIiiG~vvy~~~~~~~~~~~~~  316 (334)
T PF06027_consen  293 FALIIIGFVVYNLAESPEEEARRN  316 (334)
T ss_pred             HHHHHHHhheEEccCCcccccchh
Confidence            899999999997666555444433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.98  E-value=1.1e-07  Score=90.74  Aligned_cols=258  Identities=18%  Similarity=0.207  Sum_probs=139.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccC---CCccC---Ccccccc---cc---hhHHHHHHHHHHHHHHHHHHHhh-cch
Q 019850           11 ILAVASSAFIGSSFILKKKGLKRAGAS---GTRAG---VGGYTYL---LE---PLWWAGMVTMIVGEVANFVAYVY-APA   77 (335)
Q Consensus        11 llAl~sa~~~a~g~vlqk~~~~~~~~~---~~~~~---~~~~~~~---~~---p~w~~G~~l~~~g~~~~~~al~~-~p~   77 (335)
                      ++++.++++-+......|.+..+.+..   ..|-.   .-.....   |+   .....|+........+.+.++.. .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            456777888888888888766543321   01110   0000000   11   11112332223333455666666 477


Q ss_pred             hhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHHH
Q 019850           78 VLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV  157 (335)
Q Consensus        78 slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v~  157 (335)
                      +...-+....-+++.+++++++|||+++++++|+++..+|+.++... ..++...+   .       .-..+.....+ .
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~-~~~~~~~~---~-------~G~~l~l~aal-~  154 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED-SLNGQHVA---M-------LGFMLTLAAAF-S  154 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc-cCCCcchh---H-------HHHHHHHHHHH-H
Confidence            77777888888999999999999999999999999999998776521 11111111   0       01111111111 1


Q ss_pred             HHHhheecccCCC----chhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCC-------CcchhhHH-HHHHHHHHHHHH
Q 019850          158 LALVLHFEPRCGQ----TNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI-------SQIAYPQT-WFFLTVAAVCVV  225 (335)
Q Consensus       158 ~~l~~~~~~r~~~----~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~-------~~f~~~~~-y~~l~~~~~~~l  225 (335)
                      -.......+|..+    .....+......+++.-..   .... .   .++.       ... ++.. +.++..++.+..
T Consensus       155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~~~~~~~-~~~~~~~l~~l~i~~t~  226 (299)
T PRK11453        155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFF---VASL-I---LDGSATMIHSLVTI-DMTTILSLMYLAFVATI  226 (299)
T ss_pred             HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHH---HHHH-H---hcCchhhhhhhccC-CHHHHHHHHHHHHHHHH
Confidence            1110112222111    1111111111222211110   0000 0   1111       112 2333 334555566777


Q ss_pred             HHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhcccc
Q 019850          226 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  295 (335)
Q Consensus       226 ~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  295 (335)
                      .+....++++++.++..+.+. ...+|+++++.|.+++||..  ++.    ..+|.+++++|+++....+
T Consensus       227 ~~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~--~~~----~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        227 VGYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDERL--TGL----QFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCc--cHH----HHHHHHHHHHHHHHHhcch
Confidence            788889999999988776664 56889999999999999953  344    3567778888888765444

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.90  E-value=1.3e-07  Score=90.17  Aligned_cols=121  Identities=20%  Similarity=0.109  Sum_probs=90.4

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---Cc---------------cC-CcccccccchhH----HHH
Q 019850            1 MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASG---TR---------------AG-VGGYTYLLEPLW----WAG   57 (335)
Q Consensus         1 ~~~~~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~---~~---------------~~-~~~~~~~~~p~w----~~G   57 (335)
                      |.++++..|.++++.++++.+...+.-|.. .+.+...   .|               .+ ...++..+++++    ..|
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence            677888999999999999998888887753 2211100   00               00 000011122322    245


Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           58 MVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        58 ~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      ......+..+.+.++...|.+...-+....-++..+++.+++|||+++++|.|+++...|++++.
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            56677788899999999999999999999999999999999999999999999999999988764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.88  E-value=1.1e-08  Score=84.46  Aligned_cols=103  Identities=15%  Similarity=0.181  Sum_probs=82.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhchhhHHH
Q 019850           11 ILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGM--VTMIVGEVANFVAYVYAPAVLVTPLGALSI   88 (335)
Q Consensus        11 llAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~--~l~~~g~~~~~~al~~~p~slv~Pl~~~~l   88 (335)
                      ++-++|.++-..|+++.|++.++.+..  +       -.+++..+.+.  ..+.+++.++..++...|++..+|+.++++
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~~~~~~--~-------~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~   74 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATRPVAIG--K-------RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNF   74 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcc--h-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence            445667777888999999985433210  0       11123344544  557889999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           89 IISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        89 v~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      +++.+++.+++|||+|.++++|+.+++.|++++.
T Consensus        75 v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         75 VWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999987654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.88  E-value=1.1e-07  Score=93.45  Aligned_cols=221  Identities=14%  Similarity=0.194  Sum_probs=120.5

Q ss_pred             HHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHH------hccccccchhHHHHHHhhheeeEEEecCCC------CCC
Q 019850           64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFM------LKERLQKMGILGCITCIVGSVVIVIHAPQE------HTP  131 (335)
Q Consensus        64 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~------l~e~~~~~~~~g~~li~~G~~l~~~~~~~~------~~~  131 (335)
                      ...+...++.+.|.+...=+..+.-+++++++.++      +|||+++++++|+++...|+.++...+...      ++.
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            34467889999999999999999999999999999      699999999999999999987654321110      000


Q ss_pred             CCHHHHH--HHhcCchhhHHHHHHH-HHHHHHhh-eecc----cCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhc
Q 019850          132 NSVQEIW--ALATQPDFLIYVAATV-SVVLALVL-HFEP----RCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLD  203 (335)
Q Consensus       132 ~t~~el~--~~~~~~~fl~y~~~~~-~v~~~l~~-~~~~----r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~  203 (335)
                      .+..+..  ....+..+..-..+.. ..++.-.+ ...+    +++..  ..+......+++.-...   ... .   .+
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~--~~~t~~~~~~~~~~~~~---~~l-~---~~  241 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAA--FTVSFLYTVCVSIVTSM---IGL-V---VE  241 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--hHHHHHHHHHHHHHHHH---HHH-H---Hc
Confidence            0000000  0000000110011111 11110011 1122    22221  11122222222221111   011 1   11


Q ss_pred             CC--C-cch--hhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHH
Q 019850          204 GI--S-QIA--YPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI  278 (335)
Q Consensus       204 g~--~-~f~--~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~  278 (335)
                      +.  . ...  ++..+.++..++.+.+ -..+.|+++++-+++.+ .++.-..|+++++.|.++++|...  +.    .+
T Consensus       242 ~~~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~a-s~~~~L~PV~a~llg~l~LgE~lt--~~----~~  313 (358)
T PLN00411        242 KNNPSVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYL-AIFKPLSILIAVVMGAIFLNDSLY--LG----CL  313 (358)
T ss_pred             cCCcccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHH-HHHHhHHHHHHHHHHHHHhCCCCc--HH----HH
Confidence            11  1 111  1222233322333333 34468899998887664 445678899999999999999543  44    34


Q ss_pred             HHHHHHHHHHhhhccccCCcCCC
Q 019850          279 CGFITVLSGTIILHATREHEQTT  301 (335)
Q Consensus       279 ~G~~l~i~Gv~lLs~~~~~~~~~  301 (335)
                      +|.++++.|+.+..+.+.+|.++
T Consensus       314 iG~~LIl~Gv~l~~~~~~~~~~~  336 (358)
T PLN00411        314 IGGILITLGFYAVMWGKANEEKD  336 (358)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhh
Confidence            78889999999988766666443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.82  E-value=6.4e-07  Score=82.81  Aligned_cols=205  Identities=19%  Similarity=0.205  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCH
Q 019850           55 WAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSV  134 (335)
Q Consensus        55 ~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~  134 (335)
                      ..|.+...+...+.+.++...|.+...++..+.-+++.+++..++|||++++++.|+.+.++|+.++...+  +.+..  
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~~--  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSIN--  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--ccccc--
Confidence            55556677888899999999999999999999999999999999999999999999999999988765321  11111  


Q ss_pred             HHHHHHhcCchhhHHHHHHHHHHHHHhheecccCCCc-h--hHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhh
Q 019850          135 QEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQT-N--ILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYP  211 (335)
Q Consensus       135 ~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r~~~~-~--~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~  211 (335)
                               ..-..+..+..+ .........++..++ +  ..........+++.. +..-  .  .   ..+.+...++
T Consensus       127 ---------~~G~~~~l~a~~-~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-l~~~--~--~---~~~~~~~~~~  188 (260)
T TIGR00950       127 ---------PAGLLLGLGSGI-SFALGTVLYKRLVKKEGPELLQFTGWVLLLGALL-LLPF--A--W---FLGPNPQALS  188 (260)
T ss_pred             ---------HHHHHHHHHHHH-HHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHH-HHHH--H--H---hcCCCCCcch
Confidence                     001111111111 111111112221111 1  111111111222111 1100  0  0   1222212244


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHH
Q 019850          212 QTWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGT  288 (335)
Q Consensus       212 ~~y~-~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv  288 (335)
                      ..|. ++..++.+........++++++.++..+..+. ...|+.+.+.+.++++|.  .++.+    ..|.++++.|+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~E~--~~~~~----~~G~~li~~g~  259 (260)
T TIGR00950       189 LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA-LAEPLVALLLGLLILGET--LSLPQ----LIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHhc
Confidence            4443 33344444445555678899998887766665 588999999999999994  44443    45555666654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.80  E-value=5.9e-07  Score=85.75  Aligned_cols=223  Identities=9%  Similarity=0.121  Sum_probs=141.3

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcchhhhhchhh-HHHHHHHHHHHHHhccccccch----hHHHHHHhhheeeEE
Q 019850           51 EPLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLGA-LSIIISAVLAHFMLKERLQKMG----ILGCITCIVGSVVIV  122 (335)
Q Consensus        51 ~p~w~~G~~l---~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~la~~~l~e~~~~~~----~~g~~li~~G~~l~~  122 (335)
                      ...|..|++.   ...|++..+.|.....+++-.|+.. ++++++.+.+.+++||+.++++    +.|+++++.|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            4455667776   8899999999999999999999999 9999999999999999999999    899999999988775


Q ss_pred             EecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHHHHHHhheeccc---CCCchhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 019850          123 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPR---CGQTNILVYLGICSLMGSLTVVSIKAIGIAIK  199 (335)
Q Consensus       123 ~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r---~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~  199 (335)
                      ...+++.+   .++..   ..+.-+.+..+..+..  -.+...+|   ++.......-..+-++++..... .-   . +
T Consensus       136 ~~~~~~~~---~~~~~---~~~~Gi~~~l~sg~~y--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~---~-~  202 (290)
T TIGR00776       136 RSKDKSAG---IKSEF---NFKKGILLLLMSTIGY--LVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNL-GH---I-L  202 (290)
T ss_pred             eccccccc---ccccc---chhhHHHHHHHHHHHH--HHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHH-HH---h-c
Confidence            44322111   01100   0122333333322211  11212222   11112111122222233332221 11   0 1


Q ss_pred             HhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHH
Q 019850          200 LTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEIC  279 (335)
Q Consensus       200 ~~~~g~~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~  279 (335)
                         .  ..+.....+..+..++.. ..+..+...++++.......+.+...+++++.+.|+.+++|..  ++.++....+
T Consensus       203 ---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~i  274 (290)
T TIGR00776       203 ---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAISV  274 (290)
T ss_pred             ---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhHH
Confidence               1  112333334444455553 5566667777875555566777778889999999999999965  4689999999


Q ss_pred             HHHHHHHHHhhhccc
Q 019850          280 GFITVLSGTIILHAT  294 (335)
Q Consensus       280 G~~l~i~Gv~lLs~~  294 (335)
                      |.++++.|+++.+-+
T Consensus       275 G~~lIi~~~~l~~~~  289 (290)
T TIGR00776       275 GIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.77  E-value=8e-07  Score=84.54  Aligned_cols=212  Identities=10%  Similarity=0.097  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCH
Q 019850           56 AGMVTMIVGEVANFVAY-VYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSV  134 (335)
Q Consensus        56 ~G~~l~~~g~~~~~~al-~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~  134 (335)
                      .|.+....+..+...+. ...|.+...-+..+.-+++.+++.+ +|||+++++|.|.++.++|+.++..  +++.+....
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~~  150 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--CcccccchH
Confidence            44444445566667777 8888888888999999999999975 7999999999999999999776532  211111101


Q ss_pred             HHHHHHhcCchhhHHHHHHHHHHHHHhheecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcC-CCcchhhHH
Q 019850          135 QEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDG-ISQIAYPQT  213 (335)
Q Consensus       135 ~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g-~~~f~~~~~  213 (335)
                      .+           .+...... +-.......+|..+++........-.+++.....   ... .   .++ .....++..
T Consensus       151 G~-----------l~~l~a~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~  211 (292)
T PRK11272        151 GA-----------ILILIASA-SWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLI---ASL-L---SGERLTALPTLSG  211 (292)
T ss_pred             HH-----------HHHHHHHH-HHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH---HHH-H---cCCcccccCCHHH
Confidence            11           11111111 1111111233333222111111111222111110   110 1   111 112223444


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhc
Q 019850          214 WF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  292 (335)
Q Consensus       214 y~-~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs  292 (335)
                      |. ++..++.+......+.+.++++.+++.+... ...+|+.+++.|.++++|.  .++.    ...|.++++.|+++++
T Consensus       212 ~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~--~t~~----~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        212 FLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGET--LSPI----EWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCC--CcHH----HHHHHHHHHHHHHHHH
Confidence            43 3333444555666788899998887665554 6789999999999999995  3344    4577888999999987


Q ss_pred             cccC
Q 019850          293 ATRE  296 (335)
Q Consensus       293 ~~~~  296 (335)
                      +++.
T Consensus       285 ~~~~  288 (292)
T PRK11272        285 LGKY  288 (292)
T ss_pred             HHHh
Confidence            6543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.77  E-value=4.4e-06  Score=79.62  Aligned_cols=263  Identities=13%  Similarity=0.091  Sum_probs=131.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCccCC--------ccccccc---chhHHHHHHHHHHHHHHHHHHHhh
Q 019850            9 GLILAVASSAFIGSSFILKKKGLKRAGAS---GTRAGV--------GGYTYLL---EPLWWAGMVTMIVGEVANFVAYVY   74 (335)
Q Consensus         9 GvllAl~sa~~~a~g~vlqk~~~~~~~~~---~~~~~~--------~~~~~~~---~p~w~~G~~l~~~g~~~~~~al~~   74 (335)
                      +.++++.+.++-+..+...|.+..+.+.-   ..|-..        ..++-.|   ++....|.+.+.....+.+.++.+
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            34566777777777777777765544321   001000        0000111   112233333333444455556544


Q ss_pred             c----chhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHh-cCchhhHH
Q 019850           75 A----PAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALA-TQPDFLIY  149 (335)
Q Consensus        75 ~----p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~-~~~~fl~y  149 (335)
                      +    |.+...-+..+.-+++.+++..++|||+++++|.|+++...|++++...++  +.  +.++..... .++.-..+
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~--~~--~~~~~~~~~~~~~~G~~~  160 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN--GL--SLAELINNIASNPLSYGL  160 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc--cc--hhhhhhhccccChHHHHH
Confidence            3    445556677788899999999999999999999999999999887753221  10  111100000 01101111


Q ss_pred             HHHHHHHHHHHhheecccCCCc-hhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 019850          150 VAATVSVVLALVLHFEPRCGQT-NILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQL  228 (335)
Q Consensus       150 ~~~~~~v~~~l~~~~~~r~~~~-~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~~y~~l~~~~~~~l~Q~  228 (335)
                      .... .++-.......+|..++ +...+..   ..++.. +.   ......   +....-.++..|..+.....+...-.
T Consensus       161 ~l~a-a~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~-l~---~~~~~~---~~~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        161 AFIG-AFIWAAYCNVTRKYARGKNGITLFF---ILTALA-LW---IKYFLS---PQPAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             HHHH-HHHHHHHHHHHhhccCCCCchhHHH---HHHHHH-HH---HHHHHh---cCccccCCHHHHHHHHHHHHHHHHHH
Confidence            1111 11111111122332221 1111111   111111 10   000110   11111123333333222223344455


Q ss_pred             HHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhcc
Q 019850          229 NYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHA  293 (335)
Q Consensus       229 ~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~  293 (335)
                      .+.|+++|+.+++.+.+. .-.+|+++++.|.++++|..  ++.    ..+|.++++.|+++...
T Consensus       230 ~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~~~lgE~~--~~~----~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        230 AAWNVGILHGNMTLLATA-SYFTPVLSAALAALLLSTPL--SFS----FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHccCHHHHHHH-HHhHHHHHHHHHHHHhCCCC--cHH----HHHHHHHHHHhHHHHhh
Confidence            667999999988765544 57889999999999999954  343    44677778888766643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.76  E-value=3.5e-06  Score=80.24  Aligned_cols=264  Identities=14%  Similarity=0.065  Sum_probs=143.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---Ccc--C--------Ccccccccchh----HHHHHHHHHHHHHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASG---TRA--G--------VGGYTYLLEPL----WWAGMVTMIVGEVA   67 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~---~~~--~--------~~~~~~~~~p~----w~~G~~l~~~g~~~   67 (335)
                      +...|+.+.+++.++.+.+.+.-|.+..+.+...   .|-  +        ...+...+++.    ++.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            4467889999999999999999998765433210   010  0        00000112222    245543 4566677


Q ss_pred             HHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCchhh
Q 019850           68 NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFL  147 (335)
Q Consensus        68 ~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~fl  147 (335)
                      .+.++...|.+...-+....-++..++++    ||.+  ++.++.+.+.|+.++...+.+.+. .+          +.-.
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~-~~----------~~G~  150 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSH-VD----------LTGA  150 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCccc-CC----------hHHH
Confidence            88889999999877677676777766653    5544  455666778887766532221111 11          1011


Q ss_pred             HHHHHHHHHHHHHhhe-ecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhHHHH-HHHHHHHHHH
Q 019850          148 IYVAATVSVVLALVLH-FEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF-FLTVAAVCVV  225 (335)
Q Consensus       148 ~y~~~~~~v~~~l~~~-~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~~y~-~l~~~~~~~l  225 (335)
                      .+....  .++...+. ..++..++..........++++.- +..  ...     ..+.....++..|. ++..+++++.
T Consensus       151 ll~l~a--a~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~-l~~--~~~-----~~~~~~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        151 ALALGA--GACWAIYILSGQRAGAEHGPATVAIGSLIAALI-FVP--IGA-----LQAGEALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             HHHHHH--HHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH-HHH--HHH-----HccCcccCCHHHHHHHHHHHHHHHH
Confidence            111111  11111111 122221111111112222232211 110  111     11112223444443 2455566777


Q ss_pred             HHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCCcCCCCC
Q 019850          226 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP  303 (335)
Q Consensus       226 ~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~~~  303 (335)
                      .+....|.++++.+++.+.+. ...+|+++++.|.+++||.  .++.    ..+|.+++++|++..++.+.+|++-|.
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE~--~~~~----~~iG~~lIl~~~~~~~~~~~~~~~~~~  291 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTL-MSMEPALAAVSGMIFLGET--LTLI----QWLALGAIIAASMGSTLTIRREPKIKE  291 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHH-HHhHHHHHHHHHHHHhCCC--CcHH----HHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            788889999999988776555 5789999999999999995  3344    446677777888887777666555443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.72  E-value=1.3e-06  Score=83.30  Aligned_cols=225  Identities=15%  Similarity=0.144  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCC
Q 019850           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  133 (335)
Q Consensus        54 w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t  133 (335)
                      ...|+. ..+...++..++.+.+.+..+-+.+++.+++++++++++|||++++++.|.++++.|+.+..   ..+.+...
T Consensus        69 ~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~~~  144 (302)
T TIGR00817        69 LPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSFNW  144 (302)
T ss_pred             HHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccccH
Confidence            344555 46777899999999999999999999999999999999999999999999999999986542   22211111


Q ss_pred             HHHHHHHhcCchhhHHHHHHHHHHHHHhheeccc------CCCchhHHHHHHHHhhh-HHHHHHHHHHHHHHHHhhcCCC
Q 019850          134 VQEIWALATQPDFLIYVAATVSVVLALVLHFEPR------CGQTNILVYLGICSLMG-SLTVVSIKAIGIAIKLTLDGIS  206 (335)
Q Consensus       134 ~~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r------~~~~~~~~~~~i~gllg-g~svl~~K~v~~~l~~~~~g~~  206 (335)
                      ..++           +..+. .++-.+-....+|      .+..+...|....+.+. ..-............+..+...
T Consensus       145 ~G~~-----------~~l~a-~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~  212 (302)
T TIGR00817       145 AGFL-----------SAMIS-NITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAIS  212 (302)
T ss_pred             HHHH-----------HHHHH-HHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhc
Confidence            1111           11111 1111110111222      22223333333222111 0111100000000000000000


Q ss_pred             cchhhHHHH-HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHH
Q 019850          207 QIAYPQTWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  285 (335)
Q Consensus       207 ~f~~~~~y~-~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i  285 (335)
                      .......|. .+.....+........+.++++-+++...-. ....++++++.|.++++|..  ++.    ..+|.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~l--t~~----~~~G~~lil  285 (302)
T TIGR00817       213 GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTKI--SPQ----QVFGTGIAI  285 (302)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCCC--chh----HHHHHHHHH
Confidence            001111232 2222222222222233357887776654444 67889999999999999953  444    346777899


Q ss_pred             HHHhhhccccCCcCCC
Q 019850          286 SGTIILHATREHEQTT  301 (335)
Q Consensus       286 ~Gv~lLs~~~~~~~~~  301 (335)
                      .|+++-++.+.++.++
T Consensus       286 ~Gv~l~~~~k~~~~~~  301 (302)
T TIGR00817       286 AGVFLYSRVKAQKPKP  301 (302)
T ss_pred             HHHHHHHHHhccCcCC
Confidence            9999988776544433

specificities overlap.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.60  E-value=8.3e-08  Score=79.29  Aligned_cols=103  Identities=17%  Similarity=0.213  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHhhhhhhccC-CC-ccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHH
Q 019850           19 FIGSSFILKKKGLKRAGAS-GT-RAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLA   95 (335)
Q Consensus        19 ~~a~g~vlqk~~~~~~~~~-~~-~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la   95 (335)
                      +-+...-+-|||.+..++. +. +.-.+.+.+++||.+++++++...|++..+..++-+|+|+..|+. +++++++++.+
T Consensus         7 ~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g   86 (113)
T PF10639_consen    7 LWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTG   86 (113)
T ss_pred             HhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHH
Confidence            3345556678876554432 11 111234678999999999999999999999999999999999996 99999999999


Q ss_pred             HHHhccccccchhHHHHHHhhheeeE
Q 019850           96 HFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        96 ~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      .++.+|..+++.+.|+.+++.|+.+.
T Consensus        87 ~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   87 WLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCcccchhHHHHHHHHHcCeeee
Confidence            87777777888899999999998765

Many members are annotated as potential transmembrane proteins.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.60  E-value=3.8e-07  Score=76.48  Aligned_cols=113  Identities=23%  Similarity=0.320  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhccC---CCcc--------------CC-cccccccchhHHH---HHHHHHHHHHHH
Q 019850           10 LILAVASSAFIGSSFILKKKGLKRAGAS---GTRA--------------GV-GGYTYLLEPLWWA---GMVTMIVGEVAN   68 (335)
Q Consensus        10 vllAl~sa~~~a~g~vlqk~~~~~~~~~---~~~~--------------~~-~~~~~~~~p~w~~---G~~l~~~g~~~~   68 (335)
                      .+.|+.||++.+...++-|-|.+..+..   -.|.              +. +...-...+.|..   +-+.-+++-.+-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y   84 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHH
Confidence            5789999999999999999997744321   0000              00 0000112222321   113445677788


Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      +.|+..++.|.|.|+-.++.++..++|..++|||+|..+|+|+.+|+.|++++.
T Consensus        85 f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          85 FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999988775

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.54  E-value=2.5e-05  Score=72.29  Aligned_cols=212  Identities=16%  Similarity=0.225  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHH-HHhccccccchhHHHHHHhhheeeEEEecCCCCCCCC
Q 019850           55 WAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAH-FMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  133 (335)
Q Consensus        55 ~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~-~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t  133 (335)
                      ..|......+..+.+.++...|.+..+++.....+++.+++. +++|||+++++|.|..+...|+.++...+..+...  
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--  151 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--
Confidence            344455677888999999999999999999999999999997 66799999999999999999987775433222211  


Q ss_pred             HHHHHHHhcCchhhHHHHHHHHHHHHHhheecccCCCchhHHHHH-HHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhH
Q 019850          134 VQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLG-ICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQ  212 (335)
Q Consensus       134 ~~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r~~~~~~~~~~~-i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~  212 (335)
                        ..       .-..+...... ...+.....++..+........ .... +  ..+    ....  ......+....+.
T Consensus       152 --~~-------~g~~~~l~a~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~----~~~~--~~~~~~~~~~~~~  212 (292)
T COG0697         152 --SL-------LGLLLALAAAL-LWALYTALVKRLSRLGPVTLALLLQLL-L--ALL----LLLL--FFLSGFGAPILSR  212 (292)
T ss_pred             --HH-------HHHHHHHHHHH-HHHHHHHHHHHhcCCChHHHHHHHHHH-H--HHH----HHHH--HHhccccccCCHH
Confidence              00       01111111111 1111111122211111111111 1111 0  000    0000  0011111122222


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhh
Q 019850          213 TWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  291 (335)
Q Consensus       213 ~y~-~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lL  291 (335)
                      .|. +...+..+........+.++++.++....|.. ...++.+++.+.++++|.-+  ..++    .|..+++.|+++.
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~--~~~~----~G~~li~~g~~l~  285 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLS--PAQL----LGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCc--HHHH----HHHHHHHHHHHHH
Confidence            222 23333333435566778899988888777765 77888888899999999543  4433    4557888888888


Q ss_pred             ccc
Q 019850          292 HAT  294 (335)
Q Consensus       292 s~~  294 (335)
                      .++
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            765

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.44  E-value=8e-07  Score=72.98  Aligned_cols=66  Identities=32%  Similarity=0.483  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEE
Q 019850           57 GMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  123 (335)
Q Consensus        57 G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~  123 (335)
                      |.+....+..+...|+.+.| +.+.|+.+++.+++.+++..++|||+++++|.|++++.+|++++..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44445578899999999999 6899999999999999999999999999999999999999887754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.27  E-value=5.5e-05  Score=71.58  Aligned_cols=214  Identities=9%  Similarity=0.191  Sum_probs=127.5

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHHHHHhccccccchhH----HHHHHhhheeeEEE
Q 019850           52 PLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLAHFMLKERLQKMGIL----GCITCIVGSVVIVI  123 (335)
Q Consensus        52 p~w~~G~~l---~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la~~~l~e~~~~~~~~----g~~li~~G~~l~~~  123 (335)
                      ..|+.+++.   -.+|.++|+.++.....|.-.|+. +.+++.|.+.+.+++||--+..+++    +++++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            456666654   468999999999999999999998 8999999999999999998888865    88899999887776


Q ss_pred             ecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHHHHHHhheecccCCCchhHH---HHHHHHhhhHHHHHHHHHHHHHHHH
Q 019850          124 HAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILV---YLGICSLMGSLTVVSIKAIGIAIKL  200 (335)
Q Consensus       124 ~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v~~~l~~~~~~r~~~~~~~~---~~~i~gllgg~svl~~K~v~~~l~~  200 (335)
                      ..+++++..+..+..+      -+....+  -.+....|...||..+-+..-   ==+++=++++.--..          
T Consensus       123 ~~~~~~~~~~~~~~~k------gi~~Ll~--stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~----------  184 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK------GILALLI--STIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNL----------  184 (269)
T ss_pred             ccccccccccccchhh------HHHHHHH--HHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhh----------
Confidence            5555554333333322      1111111  122223344455553322111   011111222111110          


Q ss_pred             hhcCCCcchhhHHHHHHHHHHHHHHHH-HHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHH
Q 019850          201 TLDGISQIAYPQTWFFLTVAAVCVVTQ-LNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEIC  279 (335)
Q Consensus       201 ~~~g~~~f~~~~~y~~l~~~~~~~l~Q-~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~  279 (335)
                       +. .+.+.+..+|.=+..++.-.+.- .+++..  +.--.+...|.-|.. .+.+.++|..+++|..  +..++....+
T Consensus       185 -~~-~~~~~~k~~~~nil~G~~w~ignl~~~is~--~~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~~~  257 (269)
T PF06800_consen  185 -FS-KKPFFEKKSWKNILTGLIWGIGNLFYLISA--QKNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYTLI  257 (269)
T ss_pred             -cc-cccccccchHHhhHHHHHHHHHHHHHHHhH--HhccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHHHH
Confidence             01 12222233333233332211111 112222  122234667777777 6678889999999976  3688999999


Q ss_pred             HHHHHHHHHhh
Q 019850          280 GFITVLSGTII  290 (335)
Q Consensus       280 G~~l~i~Gv~l  290 (335)
                      |+++++.|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            99999998875

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.23  E-value=0.00016  Score=70.98  Aligned_cols=69  Identities=14%  Similarity=0.201  Sum_probs=58.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           53 LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        53 ~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      ....|+.-. .+..+...++...+.+..+=+-+++-+++++++++++|||++++++.+++++++|+.+..
T Consensus       117 llp~gl~~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        117 FLPQGLCHL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            334444333 235556699999999999999999999999999999999999999999999999988765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.17  E-value=0.0017  Score=62.09  Aligned_cols=224  Identities=14%  Similarity=0.193  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCC
Q 019850           52 PLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTP  131 (335)
Q Consensus        52 p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~  131 (335)
                      +++..+ +++.++..++-.||.+.|.+.-+=+-+..++++++++..++|+|.+++++.+++++++|+++......++++.
T Consensus        66 ~~~~~~-~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   66 KYAILS-FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            334444 5566777889999999999999999999999999999999999999999999999999999887766544443


Q ss_pred             CCHHHHHHHhcCchhhHHHHHHHHHHH-HHhh----eecccCCCc--hhHHHHHHHHhh-hHHHHHHHHHHHHHHHHhhc
Q 019850          132 NSVQEIWALATQPDFLIYVAATVSVVL-ALVL----HFEPRCGQT--NILVYLGICSLM-GSLTVVSIKAIGIAIKLTLD  203 (335)
Q Consensus       132 ~t~~el~~~~~~~~fl~y~~~~~~v~~-~l~~----~~~~r~~~~--~~~~~~~i~gll-gg~svl~~K~v~~~l~~~~~  203 (335)
                      .+.++.     ++.. .++.+....++ ....    +..++++..  ..+.|-..-++. ........+ -.+ ..... 
T Consensus       145 ~~~~~~-----~~~~-G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~-  215 (303)
T PF08449_consen  145 SNSSSF-----SSAL-GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI-  215 (303)
T ss_pred             cccccc-----cchh-HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH-
Confidence            222110     0000 11111111111 0000    111233222  233443333322 211211111 111 11100 


Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHH
Q 019850          204 GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFIT  283 (335)
Q Consensus       204 g~~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l  283 (335)
                       .-...||..+..+.....+....+.+.+.-.+++++....-+ ...--..+++.+.++|++  +.++.+|.    |.++
T Consensus       216 -~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v-~t~Rk~~sillS~~~f~~--~~~~~~~~----G~~l  287 (303)
T PF08449_consen  216 -RFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIV-TTLRKFLSILLSVIIFGH--PLSPLQWI----GIVL  287 (303)
T ss_pred             -HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhH-HHHHHHHHHHHHHHhcCC--cCChHHHH----HHHH
Confidence             112467776665555555433333455666787777664444 445567788889999987  56667665    4445


Q ss_pred             HHHHHhhhcc
Q 019850          284 VLSGTIILHA  293 (335)
Q Consensus       284 ~i~Gv~lLs~  293 (335)
                      ++.|+.+=+.
T Consensus       288 v~~g~~~~~~  297 (303)
T PF08449_consen  288 VFAGIFLYSY  297 (303)
T ss_pred             hHHHHHHHHH
Confidence            6666665443

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.15  E-value=2.5e-05  Score=65.42  Aligned_cols=74  Identities=18%  Similarity=0.164  Sum_probs=65.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecC
Q 019850           53 LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP  126 (335)
Q Consensus        53 ~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~  126 (335)
                      .|+..++++++++.+...++...|+++.+|+- +++.+.+.+.+.+++||++|..+++|+.+++.|++.+-..++
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            35667777889999999999999999999995 799999999999999999999999999999999887744443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.04  E-value=5.1e-05  Score=62.60  Aligned_cols=96  Identities=15%  Similarity=0.122  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHH-HHHHHHHHHHHHHHHHHhhcchhhhhch-hhHHHHHH
Q 019850           14 VASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWW-AGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSIIIS   91 (335)
Q Consensus        14 l~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~-~G~~l~~~g~~~~~~al~~~p~slv~Pl-~~~~lv~~   91 (335)
                      +++.++-..|....|++.             .   +++|.|. ..++++++++.+...++...|+++.+|+ .+++.+.+
T Consensus         8 ~~a~~~Ev~~~~~lK~s~-------------g---f~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~   71 (110)
T PRK09541          8 GGAILAEVIGTTLMKFSE-------------G---FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI   71 (110)
T ss_pred             HHHHHHHHHHHHHHHHhc-------------C---CCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Confidence            344555556666666651             0   2345554 4456688888889999999999999999 67999999


Q ss_pred             HHHHHHHhccccccchhHHHHHHhhheeeEEEec
Q 019850           92 AVLAHFMLKERLQKMGILGCITCIVGSVVIVIHA  125 (335)
Q Consensus        92 ~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~  125 (335)
                      .+.+.+++||+++..+++|+.+++.|++++-..+
T Consensus        72 ~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         72 SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999988874433

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.02  E-value=2.4e-05  Score=74.45  Aligned_cols=124  Identities=15%  Similarity=0.100  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC---c----------cCCcccccccch-----hHHHHHHHHHHHHHHH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASGT---R----------AGVGGYTYLLEP-----LWWAGMVTMIVGEVAN   68 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~---~----------~~~~~~~~~~~p-----~w~~G~~l~~~g~~~~   68 (335)
                      .+|.++++.++++.+...++.|+-.++.+....   .          ..........++     .++.|++..++++.++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~  226 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLE  226 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            569999999999999999988775433221000   0          000000011121     2466777778889999


Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCC
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  130 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~  130 (335)
                      ..++...|.+.+.++..++.+++.+++.+++||+++..+++|.++++.|+.......++|++
T Consensus       227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        227 MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999997766544455443

>TIGR00688 rarD rarD protein

Probab=97.97  E-value=0.00039  Score=64.55  Aligned_cols=62  Identities=15%  Similarity=0.159  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        61 ~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      ...+..+.+.++...|.+...-+....-+++++++++++|||+++++|.|+++..+|++++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677889999999999999999999999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.86  E-value=0.00011  Score=58.56  Aligned_cols=85  Identities=15%  Similarity=-0.016  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhcchhhhhchh-hHHHHHH
Q 019850           14 VASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMV-TMIVGEVANFVAYVYAPAVLVTPLG-ALSIIIS   91 (335)
Q Consensus        14 l~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~-l~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~   91 (335)
                      +.+.++-..++...|++.                -.+++.|..+.+ ++++++.+...|+...|.++..|+- +++.+..
T Consensus         7 ~~a~~~ev~~~~~lK~s~----------------g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~   70 (93)
T PF00893_consen    7 LLAILFEVVGTIALKASH----------------GFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGV   70 (93)
T ss_dssp             HHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----------------hhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence            344555566777777631                133445555554 5888989999999999999999985 5999999


Q ss_pred             HHHHHHHhccccccchhHHHHHH
Q 019850           92 AVLAHFMLKERLQKMGILGCITC  114 (335)
Q Consensus        92 ~~la~~~l~e~~~~~~~~g~~li  114 (335)
                      .+.+.+++||++|..++.|+.+|
T Consensus        71 ~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   71 TLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHhheeeC
Confidence            99999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.75  E-value=0.00029  Score=65.06  Aligned_cols=114  Identities=18%  Similarity=0.213  Sum_probs=85.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---Cc--c------------CCcccccccchhH--H--HHHHHHHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASG---TR--A------------GVGGYTYLLEPLW--W--AGMVTMIV   63 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~---~~--~------------~~~~~~~~~~p~w--~--~G~~l~~~   63 (335)
                      ....|..+++.++++.+...+++|+...+.+...   .+  .            ..+.......+.|  .  .|.+..+.
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            3457999999999999999999999754332100   00  0            0000011112223  2  34444567


Q ss_pred             HHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhhe
Q 019850           64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGS  118 (335)
Q Consensus        64 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~  118 (335)
                      ++.+++.++...|.+.+..+..++.+++.+++.+++||+++++++.|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999999999999999999985

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.71  E-value=0.001  Score=62.15  Aligned_cols=69  Identities=22%  Similarity=0.357  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCC
Q 019850           59 VTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ  127 (335)
Q Consensus        59 ~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~  127 (335)
                      ++|.+.+.+++.++...|.+.-|=+....++++++++.+++|+|+++++|.+..+.+.|++++-..+..
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            679999999999999999999999999999999999999999999999999999999998887544433

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.68  E-value=0.0024  Score=62.63  Aligned_cols=283  Identities=11%  Similarity=0.073  Sum_probs=153.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc---------------------CCCccCCcccccc---cchhHHHHHH
Q 019850            4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGA---------------------SGTRAGVGGYTYL---LEPLWWAGMV   59 (335)
Q Consensus         4 ~~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~---------------------~~~~~~~~~~~~~---~~p~w~~G~~   59 (335)
                      .+..+|++..+++.+|.+.=.+=|||. +.=+-                     -..+   +...++   ....|..+++
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             chhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHHHH
Confidence            367789999999999988777778772 21110                     0001   112222   2345555553


Q ss_pred             ---HHHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHHHHHhcccc---ccc----hhHHHHHHhhheeeEEEecCCC
Q 019850           60 ---TMIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLAHFMLKERL---QKM----GILGCITCIVGSVVIVIHAPQE  128 (335)
Q Consensus        60 ---l~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la~~~l~e~~---~~~----~~~g~~li~~G~~l~~~~~~~~  128 (335)
                         +-.+|.+.++.+......|+-.|+. +++++.+.++...+++|=-   +..    ..+|++++++|+++....+...
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k  158 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLK  158 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence               3568999999999999999999996 6789999999999998633   333    3569999999988887644333


Q ss_pred             CCCCCHHHHHHHhcCchhhHHHHHHHHHHHHHhhe-----eccc----CCCchhHHHHH---HHH-hhhHHHHHHHHHHH
Q 019850          129 HTPNSVQEIWALATQPDFLIYVAATVSVVLALVLH-----FEPR----CGQTNILVYLG---ICS-LMGSLTVVSIKAIG  195 (335)
Q Consensus       129 ~~~~t~~el~~~~~~~~fl~y~~~~~~v~~~l~~~-----~~~r----~~~~~~~~~~~---i~g-llgg~svl~~K~v~  195 (335)
                      ++..+.+|- +......-+..+++..+........     .-++    .+...  .|..   .++ ++|++..-+.=+.-
T Consensus       159 ~~~~~~~~~-~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~--~~~~lp~~~~~~~G~~~~n~~~~~~  235 (345)
T PRK13499        159 ERKMGIKKA-EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDP--LYAALPSYVVIMGGGAITNLGFCFI  235 (345)
T ss_pred             ccccccccc-cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCc--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222111100 0000111233333333322111000     0111    12111  1111   111 23333211100000


Q ss_pred             HHHH-HhhcCCCcchh-----hHHHHHHHHHHHHHHHHHHHHHHhhcc-ccc--cccchhHHHHHHHHHHHHHHHhhccc
Q 019850          196 IAIK-LTLDGISQIAY-----PQTWFFLTVAAVCVVTQLNYLNKALDT-FNA--AIVSPVYYVMFTTLTIIASAIMFKDW  266 (335)
Q Consensus       196 ~~l~-~~~~g~~~f~~-----~~~y~~l~~~~~~~l~Q~~~ln~aL~~-~~~--~~v~P~~~v~~~~~~i~~G~i~f~E~  266 (335)
                      .+-+ +..+....+..     +..|++....-+.-..|..+.-.+-+. +.+  ..+.++.+-...+++.+.|. +++|+
T Consensus       236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~  314 (345)
T PRK13499        236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW  314 (345)
T ss_pred             HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence            0001 11100112222     455666555555555564444433322 221  22344554555567777788 59999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHhhhccc
Q 019850          267 SGQDVSGIASEICGFITVLSGTIILHAT  294 (335)
Q Consensus       267 ~~~~~~~~~~~~~G~~l~i~Gv~lLs~~  294 (335)
                      ...+..+.....+|+++++.|.+++.-.
T Consensus       315 K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        315 KGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9998999999999999999999998644

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.68  E-value=0.00018  Score=70.91  Aligned_cols=123  Identities=20%  Similarity=0.156  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC-c------------------cCCcccc--cccchhHHHHHHH---
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGT-R------------------AGVGGYT--YLLEPLWWAGMVT---   60 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~-~------------------~~~~~~~--~~~~p~w~~G~~l---   60 (335)
                      ++.+|.++++.|+++.++..++||+-..+-+.... .                  .+.+...  .-.++ ++..++.   
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i  264 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAI  264 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHH
Confidence            35779999999999999999999986544322100 0                  0000000  00111 1112221   


Q ss_pred             -HHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCC
Q 019850           61 -MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE  128 (335)
Q Consensus        61 -~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~  128 (335)
                       ..+++.+|..++...+.+.+..+.-+.-+++++++..+++|+++..+++|.++++.|+.+......+|
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence             23467788889999999999999999999999999999999999999999999999987765433333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.58  E-value=0.00029  Score=67.14  Aligned_cols=115  Identities=16%  Similarity=0.059  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCcc---C---------Ccccccccch-hH----HHHHHHHHHHHHHHH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA---G---------VGGYTYLLEP-LW----WAGMVTMIVGEVANF   69 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~---~---------~~~~~~~~~p-~w----~~G~~l~~~g~~~~~   69 (335)
                      ..|.++++.|+++.+.+.++.||-.++.+......   +         .+....-.++ .|    +.| +..++++.++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~~  233 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAWN  233 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHHH
Confidence            46999999999999999999998543222100000   0         0000001112 22    222 22456788899


Q ss_pred             HHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           70 VAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        70 ~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      .++...|.+.+.++..++-+++.+++..++||+++..+++|.++|+.|+.+..
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999999999999999999999976553

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.56  E-value=7.6e-05  Score=60.34  Aligned_cols=68  Identities=31%  Similarity=0.446  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        54 w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      ...|.+....+..+...++...|.+.++++..++.+++.+++..++||+++++++.|+++++.|+.++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            34555556788899999999999999999999999999999999999999999999999999997654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.54  E-value=0.00019  Score=67.86  Aligned_cols=113  Identities=19%  Similarity=0.120  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccC-CCc---c-----C-C---------ccccc-ccchhH----HHHHHHHHH
Q 019850            8 KGLILAVASSAFIGSSFILKKKGLKRAGAS-GTR---A-----G-V---------GGYTY-LLEPLW----WAGMVTMIV   63 (335)
Q Consensus         8 iGvllAl~sa~~~a~g~vlqk~~~~~~~~~-~~~---~-----~-~---------~~~~~-~~~p~w----~~G~~l~~~   63 (335)
                      -|..+++.++++.+.+.++.|+...+.+.. ..-   .     . .         +.... ...+.|    +.+.+..++
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            467789999999999998888753322210 000   0     0 0         00000 011111    233344567


Q ss_pred             HHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheee
Q 019850           64 GEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV  120 (335)
Q Consensus        64 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l  120 (335)
                      ++.+++.+++..|.+.+.++.-++.+++.+++.+++||+++..+++|..+++.|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            888999999999999999999999999999999999999999999999999999764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.53  E-value=0.0012  Score=54.46  Aligned_cols=73  Identities=15%  Similarity=0.171  Sum_probs=62.1

Q ss_pred             ccchhHHHHHHH-HHHHHHHHHHHHhhcchhhhhchhh-HHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           49 LLEPLWWAGMVT-MIVGEVANFVAYVYAPAVLVTPLGA-LSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        49 ~~~p~w~~G~~l-~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      +++|.|...+.. +++++.+-..|+...|.++..|+-+ ++.+.+.+.+.+++||+++..++.|+.+++.|++.+
T Consensus        32 f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         32 FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            456666666644 6677778888899999999999865 899999999999999999999999999999997754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.48  E-value=0.00077  Score=64.09  Aligned_cols=117  Identities=15%  Similarity=0.072  Sum_probs=85.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC----------------CccCCcccccccchhHH----HHHHHHHHHH
Q 019850            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGASG----------------TRAGVGGYTYLLEPLWW----AGMVTMIVGE   65 (335)
Q Consensus         6 ~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~----------------~~~~~~~~~~~~~p~w~----~G~~l~~~g~   65 (335)
                      ...|.++++.++++.+.+.+..||..++.+...                .-.+...........|+    .|++..++++
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            356999999999999999999888532211000                00000000000112232    3444456778


Q ss_pred             HHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           66 VANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        66 ~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      .++..++...|.+.+..+..++-+++++++.+++||+++..+++|.++++.|+.+..
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999977653

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.46  E-value=0.00036  Score=65.69  Aligned_cols=268  Identities=18%  Similarity=0.310  Sum_probs=138.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccC-C-Ccc-CCc-----ccccccch--------hH--HHHHHHHHHHHHHH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGAS-G-TRA-GVG-----GYTYLLEP--------LW--WAGMVTMIVGEVAN   68 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~-~-~~~-~~~-----~~~~~~~p--------~w--~~G~~l~~~g~~~~   68 (335)
                      .+|+++..+| .+.+...++-++...-.|++ . .|- ...     ..-|.+.|        .|  +-|+.-. .|..+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~-tgvmlm  114 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGF-TGVMLM  114 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhh-hHHHHH
Confidence            3577788888 77777777777765443331 1 010 000     01111111        12  1222111 344577


Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE----EecCCCCCCCCHHHHHHHhcCc
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV----IHAPQEHTPNSVQEIWALATQP  144 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~----~~~~~~~~~~t~~el~~~~~~~  144 (335)
                      ..||...|++=..-+.-.+-+++.++|..+||||.|+.|-+|......|+++++    +|+.+++...+..   .-+..|
T Consensus       115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~---~~~~~~  191 (346)
T KOG4510|consen  115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ---VEYDIP  191 (346)
T ss_pred             HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc---ccccCC
Confidence            777777777666566677889999999999999999999999999999999885    4444332211111   111233


Q ss_pred             hhhHHHHHHHH-HHHHHhh-eecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcc-hhhHH-HHHHHHH
Q 019850          145 DFLIYVAATVS-VVLALVL-HFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQI-AYPQT-WFFLTVA  220 (335)
Q Consensus       145 ~fl~y~~~~~~-v~~~l~~-~~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f-~~~~~-y~~l~~~  220 (335)
                      ...+-+.-+.. .....+. +..++.+..-..-|.+.-++.-  +.+-.-.+         |.-|+ ..+.= |+++..+
T Consensus       192 gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~--s~I~~~~i---------g~~~lP~cgkdr~l~~~lG  260 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVV--SLIGCASI---------GAVQLPHCGKDRWLFVNLG  260 (346)
T ss_pred             chHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHH--HHHHHhhc---------cceecCccccceEEEEEeh
Confidence            32211111111 1111111 1222211111122322222211  11100001         11111 11222 2333444


Q ss_pred             HHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCCc
Q 019850          221 AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  298 (335)
Q Consensus       221 ~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~  298 (335)
                      +.+.+.| .++.+++|+-.+-. +.++.+.+.+.+.+.-+++|+|+-.  .|.|.    |.+.++..++..+++|..+
T Consensus       261 vfgfigQ-IllTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~ws~~----Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  261 VFGFIGQ-ILLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--IWSWV----GAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             hhhhHHH-HHHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--HHHhh----ceeeeehhHHHHHHHHHhc
Confidence            5555554 58899998654433 5677888999999999999999743  45553    4444455555555555444

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.43  E-value=0.0015  Score=53.38  Aligned_cols=72  Identities=14%  Similarity=0.017  Sum_probs=61.6

Q ss_pred             cchhHHHHH-HHHHHHHHHHHHHHhhcchhhhhchhh-HHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           50 LEPLWWAGM-VTMIVGEVANFVAYVYAPAVLVTPLGA-LSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        50 ~~p~w~~G~-~l~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      +++.|...+ .+++.++.+-..|+...|.++..++-+ ++.+.+.+.+.+++||+++..++.|+.+++.|++.+
T Consensus        27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            355554444 457778888888899999999999866 999999999999999999999999999999998765

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.35  E-value=0.0018  Score=61.71  Aligned_cols=115  Identities=20%  Similarity=0.213  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCcc---C---------------Ccccc------cccchh-HH----HH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA---G---------------VGGYT------YLLEPL-WW----AG   57 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~---~---------------~~~~~------~~~~p~-w~----~G   57 (335)
                      ..|.++++.++++.+...+++|+-.++.+....-.   .               .+...      .-.++. |+    .|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            47999999999999999999998533221100000   0               00000      001222 22    24


Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           58 MVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        58 ~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      ++..++++.++..++...+..-+.++..++-+++.+++.+++||+++..+++|.++++.|+.+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            4445677788888888889999999999999999999999999999999999999999997654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.25  E-value=0.007  Score=49.81  Aligned_cols=80  Identities=16%  Similarity=0.264  Sum_probs=60.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHH
Q 019850          208 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  287 (335)
Q Consensus       208 f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~G  287 (335)
                      +++|...........+...-..++..++++-|....+|+.+ .-++.+.+.|..+|+|..  ++.+    .+|..++++|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~l--s~~~----~~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEPV--SPRH----WCGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCCC--CHHH----HHHHHHHHHH
Confidence            45554444444444444455678889999999999999998 788888999999999954  4443    4677888999


Q ss_pred             Hhhhccc
Q 019850          288 TIILHAT  294 (335)
Q Consensus       288 v~lLs~~  294 (335)
                      +++++++
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            9998864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.23  E-value=0.003  Score=51.63  Aligned_cols=72  Identities=14%  Similarity=0.092  Sum_probs=61.8

Q ss_pred             cchhHHHHH-HHHHHHHHHHHHHHhhcchhhhhch-hhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           50 LEPLWWAGM-VTMIVGEVANFVAYVYAPAVLVTPL-GALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        50 ~~p~w~~G~-~l~~~g~~~~~~al~~~p~slv~Pl-~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      +|+.|.+.+ +.+++++.+-..|+...|+++.+++ .+++.+.+.+.+..++||+++..+++|..+++.|++.+
T Consensus        28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            455566655 4477888888889999999999987 67899999999999999999999999999999997755

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.11  E-value=0.011  Score=49.56  Aligned_cols=66  Identities=12%  Similarity=0.286  Sum_probs=53.7

Q ss_pred             HHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCC
Q 019850          226 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH  297 (335)
Q Consensus       226 ~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~  297 (335)
                      .-.+++.+++|+-|..+.+|+..-.-.+...+.|..+|+|..+  ..    -.+|..+++.|++.+....++
T Consensus        42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s--~~----~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS--LM----KIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHhhcCCCC
Confidence            3456899999999999999999888888889999999999654  33    447788899999999655543

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.08  E-value=0.0038  Score=52.76  Aligned_cols=56  Identities=18%  Similarity=0.264  Sum_probs=45.0

Q ss_pred             HHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccc
Q 019850          232 NKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT  294 (335)
Q Consensus       232 n~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~  294 (335)
                      =+||+.++++.+.|+= -..+..+++.+.++++|..+.  .+    ..|++++.+|+++++++
T Consensus        85 f~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls~--~~----~iG~~LI~~Gailvs~~  140 (140)
T COG2510          85 FRALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLSL--PT----WIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCCH--HH----HHHHHHHHhCeeeEecC
Confidence            3799999999999985 455667888999999996554  43    37888999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.03  E-value=0.015  Score=47.96  Aligned_cols=80  Identities=11%  Similarity=0.112  Sum_probs=62.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHH
Q 019850          207 QIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLS  286 (335)
Q Consensus       207 ~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~  286 (335)
                      .|++|.+....+.+..   .-.+++.+++++-|....+|+-.-.-+....+.|.++|+|..+  +.    -..|..+++.
T Consensus        26 gf~~~~~~i~~~~~~~---~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~--~~----~~~gi~lIi~   96 (110)
T PRK09541         26 GFTRLWPSVGTIICYC---ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--LP----AIIGMMLICA   96 (110)
T ss_pred             CCCchhHHHHHHHHHH---HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHH
Confidence            4788887775544433   3345899999999999999999888889999999999999654  44    3467788999


Q ss_pred             HHhhhcccc
Q 019850          287 GTIILHATR  295 (335)
Q Consensus       287 Gv~lLs~~~  295 (335)
                      |++++....
T Consensus        97 GVi~l~l~~  105 (110)
T PRK09541         97 GVLVINLLS  105 (110)
T ss_pred             HHHHHhcCC
Confidence            999995443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.80  E-value=0.054  Score=52.95  Aligned_cols=75  Identities=12%  Similarity=0.191  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCC
Q 019850           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE  128 (335)
Q Consensus        54 w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~  128 (335)
                      |-+=-++|.+-+-++.++++-.|.+.=|....+-++.+++++..+|++|+++++|.+.++...|++++-+..+++
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            344446788887899999999999999999999999999999999999999999999999999988875333333

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.75  E-value=0.0082  Score=55.36  Aligned_cols=115  Identities=24%  Similarity=0.264  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-Cc------c----------CCcccccccchhHH--HHHHHHHHHHHH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASG-TR------A----------GVGGYTYLLEPLWW--AGMVTMIVGEVA   67 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~-~~------~----------~~~~~~~~~~p~w~--~G~~l~~~g~~~   67 (335)
                      ..|+++++.++++.+...+.+|+-. +.+... ..      .          ..+.....+...+.  .|++..+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999998644 211100 00      0          00000111112222  233333456788


Q ss_pred             HHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           68 NFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        68 ~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      +..++...|.+.+.++..+..+++.+++..+++|+++.+++.|+++++.|+.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999999999976553

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.68  E-value=0.039  Score=45.14  Aligned_cols=78  Identities=10%  Similarity=0.146  Sum_probs=62.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHH
Q 019850          206 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  285 (335)
Q Consensus       206 ~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i  285 (335)
                      +.|++|.++++.+.+...   -.+++.+++|+-|....+++-...-+....+.|.++|+|..+  +.    -.+|..+++
T Consensus        24 ~gf~~~~~~~~~i~~~~~---sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~--~~----~~~gi~lIi   94 (105)
T PRK11431         24 HGFSRLTPSIITVTAMIV---SMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS--PA----RLLSLALIV   94 (105)
T ss_pred             hCCccHHHHHHHHHHHHH---HHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHH
Confidence            357888888766554433   345999999999999999999988899999999999999654  44    346778899


Q ss_pred             HHHhhhc
Q 019850          286 SGTIILH  292 (335)
Q Consensus       286 ~Gv~lLs  292 (335)
                      .|++.|.
T Consensus        95 ~GVv~l~  101 (105)
T PRK11431         95 AGIIGLK  101 (105)
T ss_pred             HHHHhhh
Confidence            9999984

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.46  E-value=0.11  Score=43.91  Aligned_cols=74  Identities=11%  Similarity=0.150  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHH-HhhcccCCCChhHHHHHHHHHHHHHHHHhhhcccc
Q 019850          217 LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA-IMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  295 (335)
Q Consensus       217 l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~-i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  295 (335)
                      +..++++......+.+.+|++.|.+...|+.........+..-. ++|+|..+  +.    ..+|.+++++|++++++++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls--~~----~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS--LK----KTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--HH----HHHHHHHHHHHHHHhccCC
Confidence            34445555566778999999999999999987776444444333 58999543  44    4578889999999998765


Q ss_pred             C
Q 019850          296 E  296 (335)
Q Consensus       296 ~  296 (335)
                      +
T Consensus       125 ~  125 (129)
T PRK02971        125 T  125 (129)
T ss_pred             C
Confidence            5

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.42  E-value=0.021  Score=47.08  Aligned_cols=77  Identities=13%  Similarity=0.191  Sum_probs=61.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHH
Q 019850          206 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  285 (335)
Q Consensus       206 ~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i  285 (335)
                      +.|++|.+.+..+.+....   .+++.+++|+-|....+|+-...-+....+.|.++|+|..+  +.    -..|..+++
T Consensus        30 ~gf~~~~~~~~~~~~~~~s---f~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~--~~----~~~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGILSLAAVLAA---FSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN--RK----GWIGLVLLL  100 (109)
T ss_pred             cCCcchHHHHHHHHHHHHH---HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC--HH----HHHHHHHHH
Confidence            3588888877665544333   35899999999999999999989999999999999999654  44    346777888


Q ss_pred             HHHhhh
Q 019850          286 SGTIIL  291 (335)
Q Consensus       286 ~Gv~lL  291 (335)
                      .|++.|
T Consensus       101 ~GVi~l  106 (109)
T PRK10650        101 AGMVMI  106 (109)
T ss_pred             HHHHHh
Confidence            999887

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.36  E-value=0.067  Score=43.81  Aligned_cols=78  Identities=15%  Similarity=0.159  Sum_probs=61.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHH
Q 019850          207 QIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLS  286 (335)
Q Consensus       207 ~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~  286 (335)
                      .|+++.+++..+.+....   .++|.+|+|+-|....+++-.-.-+....+.|.++|+|..+  +.    -..|+.++++
T Consensus        26 gf~~~~~~il~~v~~~~s---f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~--~~----~~~gl~Liia   96 (106)
T COG2076          26 GFTRLWPSILTIVGYGLS---FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS--LI----KLLGLALILA   96 (106)
T ss_pred             cccccchHHHHHHHHHHH---HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC--HH----HHHHHHHHHH
Confidence            477777777555544433   34899999999999999999999999999999999999654  33    3467788999


Q ss_pred             HHhhhcc
Q 019850          287 GTIILHA  293 (335)
Q Consensus       287 Gv~lLs~  293 (335)
                      |++.|-.
T Consensus        97 Gvi~Lk~  103 (106)
T COG2076          97 GVIGLKL  103 (106)
T ss_pred             HHHHhhh
Confidence            9998854

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.33  E-value=0.68  Score=44.33  Aligned_cols=117  Identities=19%  Similarity=0.191  Sum_probs=73.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHh----hhhhhccC--------------CCccCCcccccccchhHHHHHHHHHHHHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKK----GLKRAGAS--------------GTRAGVGGYTYLLEPLWWAGMVTMIVGEV   66 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~----~~~~~~~~--------------~~~~~~~~~~~~~~p~w~~G~~l~~~g~~   66 (335)
                      +.--|+++++.+.+.-+.--...|.    +..+.-.+              -.|.-.+.++..|+|+=+....+..+=..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3445888888888886654433333    21111000              00111124567888877777777666566


Q ss_pred             HHHHHHhhcchh---hhhchhh-HHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           67 ANFVAYVYAPAV---LVTPLGA-LSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        67 ~~~~al~~~p~s---lv~Pl~~-~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      .|..-+-++|-+   +=+.+|= +.-++|.++++.++|||+++.+|+++.+..+|+...
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            777777777655   1111211 233467889999999999999999999999997654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.31  E-value=0.12  Score=51.04  Aligned_cols=62  Identities=18%  Similarity=0.297  Sum_probs=54.8

Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCC
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  130 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~  130 (335)
                      =+||++-..+-..=+.+.+=+|++.++..+.+||+|..+.+++++.+.|++++...+.++..
T Consensus       177 naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  177 NAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence            35788888888888999999999999999999999999999999999999998877655443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=95.88  E-value=0.018  Score=54.84  Aligned_cols=61  Identities=11%  Similarity=-0.041  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEE
Q 019850           62 IVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIV  122 (335)
Q Consensus        62 ~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~  122 (335)
                      .+++.++..+++..|.+.++++.-++.+++.+++.++++|+++..++.|+.+++.|+.++.
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3678899999999999999999999999999999999999999999999999988877654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.86  E-value=0.078  Score=51.96  Aligned_cols=123  Identities=21%  Similarity=0.180  Sum_probs=78.3

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC------C--------------CccCCcccccccchhHHHHHHHHH
Q 019850            3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGAS------G--------------TRAGVGGYTYLLEPLWWAGMVTMI   62 (335)
Q Consensus         3 ~~~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~------~--------------~~~~~~~~~~~~~p~w~~G~~l~~   62 (335)
                      .++.++|-++++.||+++|+..++|++-.++.+..      +              .|.  +..+.-.+  |-.+. +++
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~--~i~~~~w~--~~~~~-~~v  237 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERS--GIESIHWT--SQVIG-LLV  237 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehh--hhhccCCC--hhhHH-HHH
Confidence            35678999999999999999999999976654321      0              010  11222111  22111 122


Q ss_pred             HHHHHHHHHHhhcchhh-------hhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCC
Q 019850           63 VGEVANFVAYVYAPAVL-------VTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  130 (335)
Q Consensus        63 ~g~~~~~~al~~~p~sl-------v~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~  130 (335)
                      ...++.+.-+...|..+       +.-=...+-++++++..++.|+++++.-++|.+++++|.++.....+++++
T Consensus       238 ~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  238 GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            22234444444444432       333334567889999999999999999999999999998777655544433

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.84  E-value=0.87  Score=43.68  Aligned_cols=72  Identities=18%  Similarity=0.240  Sum_probs=65.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEe
Q 019850           53 LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  124 (335)
Q Consensus        53 ~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~  124 (335)
                      ....=.++++.|..+..++|.....|--|-+=+.-++|+-+++..+||++++.++|.|+..+..|.+.+...
T Consensus        88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            344456889999999999999999999999999999999999999999999999999999999998887655

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.75  E-value=0.089  Score=41.78  Aligned_cols=66  Identities=11%  Similarity=0.046  Sum_probs=32.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHH
Q 019850          207 QIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE  277 (335)
Q Consensus       207 ~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~  277 (335)
                      .++++.+....+.   +...-.+++.+++|+-|....+|+..-.-+....+.|..+|+|..+  +.++.+.
T Consensus        25 g~~~~~~~~~~~~---~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s--~~~~~gi   90 (93)
T PF00893_consen   25 GFTQLIPTILAVV---GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS--LSKWLGI   90 (93)
T ss_dssp             ---------HHHH---HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             hhcchhhHHHHHH---HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHhhe
Confidence            4666665554333   3334456999999999999999999988889999999999999554  4555443

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.23  E-value=0.14  Score=48.62  Aligned_cols=88  Identities=10%  Similarity=0.217  Sum_probs=62.8

Q ss_pred             hHHHHH-HHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHh
Q 019850          211 PQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTI  289 (335)
Q Consensus       211 ~~~y~~-l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~  289 (335)
                      +..+.+ ++.++.=.+.|. .+-++.+.-..+...|+-+...-+.+.+.|+++|+||...  .++..=.++++++++|++
T Consensus        42 ~~~~~~~~lsG~~W~iGq~-~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~  118 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQI-GQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVI  118 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHH
Confidence            344433 333333344442 3335666666778899999999999999999999999864  566667778899999999


Q ss_pred             hhccccCCcCCC
Q 019850          290 ILHATREHEQTT  301 (335)
Q Consensus       290 lLs~~~~~~~~~  301 (335)
                      +-+.++++++++
T Consensus       119 lts~~~~~~~~~  130 (269)
T PF06800_consen  119 LTSYQDKKSDKS  130 (269)
T ss_pred             Hhcccccccccc
Confidence            887776666543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.09  E-value=0.17  Score=42.65  Aligned_cols=112  Identities=21%  Similarity=0.304  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhh----ccCC-------------------------CccCCccccccc-----chhH
Q 019850            9 GLILAVASSAFIGSSFILKKKGLKRA----GASG-------------------------TRAGVGGYTYLL-----EPLW   54 (335)
Q Consensus         9 GvllAl~sa~~~a~g~vlqk~~~~~~----~~~~-------------------------~~~~~~~~~~~~-----~p~w   54 (335)
                      |.++++.|+++.+.-.+++|+..++.    ++.+                         .+.........+     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999988876663    1100                         000000001111     1122


Q ss_pred             HHHHH-HHHHHH---HHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheee
Q 019850           55 WAGMV-TMIVGE---VANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVV  120 (335)
Q Consensus        55 ~~G~~-l~~~g~---~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l  120 (335)
                      +.-++ ..+.+.   ..++..+...+..--+=++.+--+.+.+++..+++|++|.+++.|+.+++.|..+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            22222 122333   3445555666666677788888999999999999999999999999999999653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.03  E-value=0.59  Score=37.94  Aligned_cols=65  Identities=17%  Similarity=0.195  Sum_probs=47.0

Q ss_pred             HHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhccccCCc
Q 019850          226 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  298 (335)
Q Consensus       226 ~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~  298 (335)
                      .+......|++..+ ..+. ......++++.+.|.++|+|.  .++..    ..|.+++.+|++++..++...
T Consensus        47 ~~~~~~~~a~~~~~-~~v~-~i~~~~pi~~~ll~~~~~~er--~~~~~----~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVA-AIFSLSPIFTALLSWLFFKER--LSPRR----WLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHH-HHHHHHHHHHHHHHHHHhcCC--CCHHH----HHHHHHHHHHHHHHhhhhccc
Confidence            34556667888887 4555 445579999999999999994  44553    356678889999997665543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.01  E-value=0.25  Score=46.58  Aligned_cols=124  Identities=18%  Similarity=0.172  Sum_probs=87.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC-C--------------CccCCcccccccchhHHHHHHHHH----HHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGAS-G--------------TRAGVGGYTYLLEPLWWAGMVTMI----VGE   65 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~-~--------------~~~~~~~~~~~~~p~w~~G~~l~~----~g~   65 (335)
                      .-..|+.+|+.+..|-+.=.+.-||..+..+.. +              ....+....++.-+.-..++..-+    +=+
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccch
Confidence            345799999999999887777766643211110 0              000111223333333344444433    345


Q ss_pred             HHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCC
Q 019850           66 VANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE  128 (335)
Q Consensus        66 ~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~  128 (335)
                      .+..+||+-.|...-.-+.+++-.+..+.+..++||++|..||.|+.+++.++.-.....+++
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            689999999999999999999999999999999999999999999999999977665444443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.00  E-value=0.044  Score=52.31  Aligned_cols=114  Identities=21%  Similarity=0.212  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC--cc-----CC---c-cc---ccccchhHH----HHHHHHHHHHHHH
Q 019850            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASGT--RA-----GV---G-GY---TYLLEPLWW----AGMVTMIVGEVAN   68 (335)
Q Consensus         7 ~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~~~--~~-----~~---~-~~---~~~~~p~w~----~G~~l~~~g~~~~   68 (335)
                      ..|++.++.|+++++.-.+.-|+. ...+....  ..     +.   . ..   +-.+++.+|    .|++ ..+++.+.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~y  228 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF-GVDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFFY  228 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc-CCCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHHH
Confidence            569999999999998888777653 11111000  00     00   0 00   111122333    4444 46777788


Q ss_pred             HHHHh-hcchhhhhchhhHHHHHHHHHHHHHhccccccchh----HHHHHHhhheeeEE
Q 019850           69 FVAYV-YAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGI----LGCITCIVGSVVIV  122 (335)
Q Consensus        69 ~~al~-~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~----~g~~li~~G~~l~~  122 (335)
                      +.++. ..+.+...++...+.+.+.+.+.+++||+.+++++    +|.++++.|+.++.
T Consensus       229 ~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       229 LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            88888 89999999999999999999999999999999999    99999999987664

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.56  E-value=0.73  Score=44.02  Aligned_cols=79  Identities=13%  Similarity=0.209  Sum_probs=60.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-chhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCC
Q 019850           52 PLWWAGMVTMIVGEVANFVAYVYA-PAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  130 (335)
Q Consensus        52 p~w~~G~~l~~~g~~~~~~al~~~-p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~  130 (335)
                      +.|..=..++-.-++.|=.|+.|. |.-+=-=+=+.+++.|+.++..++|+|-+.+++..++++.+|+++...++.++..
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~  144 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGR  144 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchh
Confidence            445555555555667777777774 3333333567889999999999999999999999999999999888777766554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.29  E-value=0.058  Score=51.32  Aligned_cols=117  Identities=15%  Similarity=0.201  Sum_probs=76.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhh--hhccCCCcc-----CC----------ccccccc------------chhHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLK--RAGASGTRA-----GV----------GGYTYLL------------EPLWW   55 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~--~~~~~~~~~-----~~----------~~~~~~~------------~p~w~   55 (335)
                      ....|.++++.|+++.+...++.||-..  +.+......     +.          +......            ...|.
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            3467999999999999999999888544  111100000     00          0000000            01122


Q ss_pred             HHHHH----HHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeE
Q 019850           56 AGMVT----MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVI  121 (335)
Q Consensus        56 ~G~~l----~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~  121 (335)
                      .+...    +...+..++.++...+.+...-.+.+.-+++.+++..+++|+++..+++|..+++.|+.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            12211    1112234456777888888888888899999999999999999999999999999997654

specificities overlap.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=93.53  E-value=0.2  Score=39.94  Aligned_cols=70  Identities=19%  Similarity=0.290  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhc
Q 019850          216 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  292 (335)
Q Consensus       216 ~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs  292 (335)
                      .+..+..+........+.++++.++..+.+..+ ..|+.+.+.|.++++|..  ++.    ...|.++++.|++++.
T Consensus        56 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~~----~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   56 LLFLGLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERP--SWR----QIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHhhccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHHH
Confidence            333344433445567888999999988888776 799999999999999954  344    4456667777777653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=93.27  E-value=0.74  Score=43.61  Aligned_cols=62  Identities=32%  Similarity=0.499  Sum_probs=52.2

Q ss_pred             HHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCC
Q 019850           69 FVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  130 (335)
Q Consensus        69 ~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~  130 (335)
                      .-|+...+..-++-+-+-+.+.-++++.++||-|-+..++.|++.|++|+++++...-+.++
T Consensus        96 V~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd  157 (336)
T KOG2766|consen   96 VKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGD  157 (336)
T ss_pred             eeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccc
Confidence            45667777778888889999999999999999999999999999999999988765544443

>TIGR00803 nst UDP-galactose transporter

Probab=91.66  E-value=0.97  Score=40.98  Aligned_cols=115  Identities=17%  Similarity=0.170  Sum_probs=77.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC------C--------------CccCC--cccc-ccc-chhHHHHHHH
Q 019850            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGAS------G--------------TRAGV--GGYT-YLL-EPLWWAGMVT   60 (335)
Q Consensus         5 ~~~iGvllAl~sa~~~a~g~vlqk~~~~~~~~~------~--------------~~~~~--~~~~-~~~-~p~w~~G~~l   60 (335)
                      +...|+.+.+.+.++.+...+.|+++.++.+..      +              .+++.  .... ... .+.+|.=.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            445677777777777788888998875432110      0              00000  0011 111 2233333344


Q ss_pred             HHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhhee
Q 019850           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSV  119 (335)
Q Consensus        61 ~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~  119 (335)
                      ...+..+-...+...+.....=...++.+++.+++.++++|+++...|.|+.++..|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            55666666667788888888899999999999999999999999999999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=91.30  E-value=14  Score=35.19  Aligned_cols=196  Identities=12%  Similarity=0.087  Sum_probs=96.9

Q ss_pred             HHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCCCCCCCHHHHHHHhcCch
Q 019850           66 VANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPD  145 (335)
Q Consensus        66 ~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~t~~el~~~~~~~~  145 (335)
                      .+-..++...|+.+...+--.+-+.-..++..      +.+|.+.+.+.+.|..++...++..++.           +|-
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~~~~l-----------Dp~  148 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQSVWSL-----------DPV  148 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCCcCcC-----------CHH
Confidence            34456777788877654444443333332222      4567677778888988776555444432           222


Q ss_pred             hhHHHHHHHHHHHHHhhe-ecccCCC-chhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHH-HHHHHH
Q 019850          146 FLIYVAATVSVVLALVLH-FEPRCGQ-TNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFF-LTVAAV  222 (335)
Q Consensus       146 fl~y~~~~~~v~~~l~~~-~~~r~~~-~~~~~~~~i~gllgg~svl~~K~v~~~l~~~~~g~~~f~~~~~y~~-l~~~~~  222 (335)
                      -..|.....+....  |. ..+|-++ .+..--.+++-..++.-++ -  ++.     .+....+.+|..-.. +.+++.
T Consensus       149 Gv~~Al~AG~~Wa~--YIv~G~r~g~~~~g~~g~a~gm~vAaviv~-P--ig~-----~~ag~~l~~p~ll~laLgvavl  218 (292)
T COG5006         149 GVALALGAGACWAL--YIVLGQRAGRAEHGTAGVAVGMLVAALIVL-P--IGA-----AQAGPALFSPSLLPLALGVAVL  218 (292)
T ss_pred             HHHHHHHHhHHHHH--HHHHcchhcccCCCchHHHHHHHHHHHHHh-h--hhh-----hhcchhhcChHHHHHHHHHHHH
Confidence            33343333332211  22 2333331 1110001111122221111 0  111     022334556655433 334444


Q ss_pred             HHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhc
Q 019850          223 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  292 (335)
Q Consensus       223 ~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs  292 (335)
                      +...--..-.-+|++-++.. .-++.+.+|..+.+.|.++++|..  ++.||....+= +....|+.+=.
T Consensus       219 SSalPYsLEmiAL~rlp~~~-F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~~V-iaAsaG~~lt~  284 (292)
T COG5006         219 SSALPYSLEMIALRRLPART-FGTLLSLEPALAALSGLIFLGETL--TLIQWLAIAAV-IAASAGSTLTA  284 (292)
T ss_pred             hcccchHHHHHHHhhCChhH-HHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHHHH-HHHHhcccccc
Confidence            44433334445888877654 456678999999999999999954  56777655432 23444444433

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.98  E-value=12  Score=34.26  Aligned_cols=59  Identities=24%  Similarity=0.222  Sum_probs=53.7

Q ss_pred             HHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEe
Q 019850           66 VANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  124 (335)
Q Consensus        66 ~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~  124 (335)
                      -....||...+.+.+..+.+..-.|.-+++...+|+|+...+++++++.+.|++++...
T Consensus        68 Y~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   68 YLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             cHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            45677899999999999999999999999999999999999999999999998888653

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=89.89  E-value=1.2  Score=36.94  Aligned_cols=74  Identities=11%  Similarity=0.159  Sum_probs=52.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHH
Q 019850          207 QIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLS  286 (335)
Q Consensus       207 ~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~  286 (335)
                      .+++|...+-+..-..+.+    ...-.|.+.|.+..+|+.+..--+++++.|..+.+|...-  .    -.+|..++++
T Consensus        38 Ll~n~~y~ipf~lNq~GSv----~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~--~----~~~G~~Li~~  107 (113)
T PF10639_consen   38 LLLNPKYIIPFLLNQSGSV----LFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR--R----TWLGMALILA  107 (113)
T ss_pred             HHHhHHHHHHHHHHHHHHH----HHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch--h----HHHHHHHHHc
Confidence            3556665554444444444    4556788899999999999888888999997777765332  2    3578888888


Q ss_pred             HHhh
Q 019850          287 GTII  290 (335)
Q Consensus       287 Gv~l  290 (335)
                      |+.+
T Consensus       108 Gv~L  111 (113)
T PF10639_consen  108 GVAL  111 (113)
T ss_pred             Ceee
Confidence            8765

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=89.36  E-value=0.48  Score=44.52  Aligned_cols=221  Identities=14%  Similarity=0.183  Sum_probs=126.9

Q ss_pred             cccchhHHHHHHH---HHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHHHHHhccccccchhH----HHHHHhhhee
Q 019850           48 YLLEPLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLAHFMLKERLQKMGIL----GCITCIVGSV  119 (335)
Q Consensus        48 ~~~~p~w~~G~~l---~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la~~~l~e~~~~~~~~----g~~li~~G~~  119 (335)
                      .+.-..|..|++.   -.+|...|+-|...-..|.-.|+. +.+++-+.+++.+.+||=-+..+.+    +.++++.|..
T Consensus        53 ~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~  132 (288)
T COG4975          53 ELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIY  132 (288)
T ss_pred             ccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhhe
Confidence            3444567777755   346788899999999999999996 5789999999999999998887753    7788899988


Q ss_pred             eEEEecCCCCCCCCHHHHHHHhcCchhhHHHHHHHHH--HHHHhheecccCCCchhHHHHHHHHhhhHHHHHHHHHHHHH
Q 019850          120 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSV--VLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIA  197 (335)
Q Consensus       120 l~~~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~v--~~~l~~~~~~r~~~~~~~~~~~i~gllgg~svl~~K~v~~~  197 (335)
                      +-....+.+.+..+++.+.+-.          ..+.+  .-...|.+.+|.-.            +.+.++++-++++-.
T Consensus       133 lTs~~~~~nk~~~~~~n~kkgi----------~~L~iSt~GYv~yvvl~~~f~------------v~g~saiLPqAiGMv  190 (288)
T COG4975         133 LTSKQDRNNKEEENPSNLKKGI----------VILLISTLGYVGYVVLFQLFD------------VDGLSAILPQAIGMV  190 (288)
T ss_pred             EeeeeccccccccChHhhhhhe----------eeeeeeccceeeeEeeecccc------------ccchhhhhHHHHHHH
Confidence            8776666555545555554311          11000  00111222222110            223333333332221


Q ss_pred             HH---HhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHH
Q 019850          198 IK---LTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGI  274 (335)
Q Consensus       198 l~---~~~~g~~~f~~~~~y~~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~  274 (335)
                      +-   ....+.+-..+-.+|.-+..++.=+..-+.++-.+=+.+-++ ....-|..- +.+.++|..+++|..  +..++
T Consensus       191 ~~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt-~FSlSQlgV-iisTiGGIl~L~ekK--tkkEm  266 (288)
T COG4975         191 IGALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVAT-SFSLSQLGV-IISTIGGILFLGEKK--TKKEM  266 (288)
T ss_pred             HHHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceee-eeeHhhhee-eeeecceEEEEeccC--chhhh
Confidence            11   111122344455566655554433222222222111222222 111222221 235668999999965  47999


Q ss_pred             HHHHHHHHHHHHHHhhhccc
Q 019850          275 ASEICGFITVLSGTIILHAT  294 (335)
Q Consensus       275 ~~~~~G~~l~i~Gv~lLs~~  294 (335)
                      .....|.++++.|.++|+--
T Consensus       267 ~~v~iGiilivvgai~lg~~  286 (288)
T COG4975         267 VYVIIGIILIVVGAILLGIA  286 (288)
T ss_pred             hhhhhhHHHHHHHhhhhhee
Confidence            99999999999999998654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.33  E-value=0.77  Score=44.69  Aligned_cols=72  Identities=19%  Similarity=0.334  Sum_probs=59.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcchhhhhchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEE
Q 019850           51 EPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  123 (335)
Q Consensus        51 ~p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~  123 (335)
                      ++.-..|.. ..+|-++.-.++..-|.+..|-+-++..++++++++++.+|+.++..+...+.++.|+.+-..
T Consensus        84 ~~llpl~~~-~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen   84 RTLLPLGLV-FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             HHHHHHHHH-HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            333334433 346777888899999999999999999999999999999999999999998888888766544

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.56  E-value=0.76  Score=37.69  Aligned_cols=77  Identities=18%  Similarity=0.298  Sum_probs=64.6

Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhchh-hHHHHHHHHHHHHHhcccccc-chhHHHHHHhhheeeEE
Q 019850           45 GYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIISAVLAHFMLKERLQK-MGILGCITCIVGSVVIV  122 (335)
Q Consensus        45 ~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~la~~~l~e~~~~-~~~~g~~li~~G~~l~~  122 (335)
                      .+.++.|+..++=+++.--|+.+.+.-|+-+|.++..|+. ++++.|+.+++..+ +|+... +-..|+.+++.|+.+.+
T Consensus        46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence            4677888999999999989999999999999999999985 67899999998775 666554 45779999999976643

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=88.06  E-value=14  Score=36.48  Aligned_cols=225  Identities=14%  Similarity=0.213  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHhhcchhhhhch-hhHHHHHHHHHHHHHhcc-------ccccchhHHHHHHhhheeeEEEecCCCCCCC-
Q 019850           62 IVGEVANFVAYVYAPAVLVTPL-GALSIIISAVLAHFMLKE-------RLQKMGILGCITCIVGSVVIVIHAPQEHTPN-  132 (335)
Q Consensus        62 ~~g~~~~~~al~~~p~slv~Pl-~~~~lv~~~~la~~~l~e-------~~~~~~~~g~~li~~G~~l~~~~~~~~~~~~-  132 (335)
                      .+|.+..-.+.++.-.|+-+.+ ..++.++..++-+.+.++       +-.+...+|++++.+|++++...+...+++. 
T Consensus        84 GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~  163 (344)
T PF06379_consen   84 GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELG  163 (344)
T ss_pred             hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhc
Confidence            3444444555566666666554 244555555555555432       2233456799999999998876654333222 


Q ss_pred             -CHHHHHHHhcCchhhHHHHHHHHHHHHHhhee---cc------cCCCchhHHHHHHHH----hhhHHHHHHHHHHHHHH
Q 019850          133 -SVQEIWALATQPDFLIYVAATVSVVLALVLHF---EP------RCGQTNILVYLGICS----LMGSLTVVSIKAIGIAI  198 (335)
Q Consensus       133 -t~~el~~~~~~~~fl~y~~~~~~v~~~l~~~~---~~------r~~~~~~~~~~~i~g----llgg~svl~~K~v~~~l  198 (335)
                       +.+|.  -+  ..-+.-+++..+.....-+-.   .|      ..|..  ..|...-+    +.||+..=+.=++-...
T Consensus       164 ~~~~ef--n~--~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~--~l~~~l~~~vvv~~GGf~tN~~yc~~~l~  237 (344)
T PF06379_consen  164 EEAKEF--NF--KKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVN--PLYANLPVYVVVLWGGFITNLIYCLILLA  237 (344)
T ss_pred             cchhhh--hh--hhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCC--cHHHhCchhhhhhhhHHHHHHHHHHHHHh
Confidence             22331  11  111222222222222211100   11      11211  12222211    34554443333332222


Q ss_pred             H-Hhhc--CCCcchhh---HHHHHHHHHHHHHHHHHHHHHHhhcc-cc--ccccchhHHHHHHHHHHHHHHHhhcccCCC
Q 019850          199 K-LTLD--GISQIAYP---QTWFFLTVAAVCVVTQLNYLNKALDT-FN--AAIVSPVYYVMFTTLTIIASAIMFKDWSGQ  269 (335)
Q Consensus       199 ~-~~~~--g~~~f~~~---~~y~~l~~~~~~~l~Q~~~ln~aL~~-~~--~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~  269 (335)
                      + .+.+  +|.....+   .-|++...+-+.=..|..+...+-.+ ++  ....-++...+..+++-+.|. .++||.+.
T Consensus       238 ~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~lkEWKg~  316 (344)
T PF06379_consen  238 KNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-ILKEWKGA  316 (344)
T ss_pred             hcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-HHHHhccC
Confidence            2 1111  12112222   23666666666778899888876644 32  256778888888888888775 67999999


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhcc
Q 019850          270 DVSGIASEICGFITVLSGTIILHA  293 (335)
Q Consensus       270 ~~~~~~~~~~G~~l~i~Gv~lLs~  293 (335)
                      +......+.+|+++++.+++++.-
T Consensus       317 s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  317 SKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhc
Confidence            988888899999999998887753

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=87.36  E-value=3.7  Score=33.52  Aligned_cols=46  Identities=22%  Similarity=0.406  Sum_probs=37.2

Q ss_pred             hchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCC
Q 019850           81 TPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ  127 (335)
Q Consensus        81 ~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~  127 (335)
                      +.-+++-++.++.-....-|.|+++.||+|...|..|+.++ .++|.
T Consensus        62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR  107 (109)
T COG1742          62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPR  107 (109)
T ss_pred             HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCC
Confidence            44567777788888899999999999999999999995544 45654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.35  E-value=19  Score=33.93  Aligned_cols=191  Identities=13%  Similarity=0.169  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhchhhHH----HHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCCC----CC
Q 019850           59 VTMIVGEVANFVAYVYAPAVLVTPLGALS----IIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE----HT  130 (335)
Q Consensus        59 ~l~~~g~~~~~~al~~~p~slv~Pl~~~~----lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~~----~~  130 (335)
                      ..+.+..+..=-|+.+.|.    |-.+++    -+=.++++..+.|.+-++++..-+++|++|++++..--.+-    ++
T Consensus        93 ~sYLlAMVssN~Alq~vpY----PTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~  168 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPY----PTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDK  168 (337)
T ss_pred             HHHHHHHHhccchhcccCC----cHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCccc
Confidence            3454555555555666553    322222    12235678888899999999999999999999886542221    12


Q ss_pred             CCCHHHHHHHhcCchhhHHHHHHHHHHHHH---hh----ee--cccCCCchhHHHHHH-HHhhhHHHHHHHHHHHHHHHH
Q 019850          131 PNSVQEIWALATQPDFLIYVAATVSVVLAL---VL----HF--EPRCGQTNILVYLGI-CSLMGSLTVVSIKAIGIAIKL  200 (335)
Q Consensus       131 ~~t~~el~~~~~~~~fl~y~~~~~~v~~~l---~~----~~--~~r~~~~~~~~~~~i-~gllgg~svl~~K~v~~~l~~  200 (335)
                      +.-..|+..               +..+.+   -.    ++  +-+.+..++..|.-. +.+.-|...+++-..=+.+. 
T Consensus       169 t~g~GElLL---------------~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y-  232 (337)
T KOG1580|consen  169 TFGFGELLL---------------ILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY-  232 (337)
T ss_pred             ccchHHHHH---------------HHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHH-
Confidence            222233211               111111   00    01  112223344444332 33333333333221111111 


Q ss_pred             hhcCCCcchhhHHHH-HHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHH
Q 019850          201 TLDGISQIAYPQTWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI  278 (335)
Q Consensus       201 ~~~g~~~f~~~~~y~-~l~~~~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~  278 (335)
                           -.-.||..|- +...++.+++.| .|.=+....|.+.. ..+.+..--++++++++++|+.  ..++.||++-.
T Consensus       233 -----F~~RhP~~~~~l~l~ai~s~LGQ-~fIF~tv~~FgPLt-CSivTTTRKfFTil~SVllf~n--pls~rQwlgtv  302 (337)
T KOG1580|consen  233 -----FVQRHPYVFWDLTLLAIASCLGQ-WFIFKTVEEFGPLT-CSIVTTTRKFFTILISVLLFNN--PLSGRQWLGTV  302 (337)
T ss_pred             -----HHHhccHHHHHHHHHHHHHHhhh-HHHHHHHHHhCCee-EEEEeehHHHHHHHHHHHHhcC--cCcHHHHHHHH
Confidence                 0124666544 445555556666 34444455554432 3344556677889999999998  45677775443

>PRK02237 hypothetical protein; Provisional

Probab=85.07  E-value=3.7  Score=33.72  Aligned_cols=46  Identities=24%  Similarity=0.390  Sum_probs=37.3

Q ss_pred             hchhhHHHHHHHHHHHHHhccccccchhHHHHHHhhheeeEEEecCC
Q 019850           81 TPLGALSIIISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ  127 (335)
Q Consensus        81 ~Pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~~~~  127 (335)
                      +.-+++-++.+++-....-|+|+++.|++|..++.+|+.++. ++|.
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecCC
Confidence            344667777788889999999999999999999999976654 5554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=83.42  E-value=6.2  Score=38.97  Aligned_cols=61  Identities=10%  Similarity=0.129  Sum_probs=49.8

Q ss_pred             HhhccccccccchhHHHHHHHHHHHHHHHhhcccCCC-ChhHHHHHHHHHHHHHHHHhhhcc
Q 019850          233 KALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQ-DVSGIASEICGFITVLSGTIILHA  293 (335)
Q Consensus       233 ~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~-~~~~~~~~~~G~~l~i~Gv~lLs~  293 (335)
                      ++.|.--.+.-.|+..-.-.+.+.+.+.++++||... +..+......|++++++|+.+-++
T Consensus        92 ~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         92 LTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            4556656667799999999999999999999999722 335556688999999999999988

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 53/352 (15%), Positives = 97/352 (27%), Gaps = 92/352 (26%)

Query: 31  LKRAGASGTRAGVGG-----YTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVL---VTP 82
           L        +  V       Y +L+ P+      T           Y+     L      
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYKFLMSPI-----KTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 83  LGALSI-IISAVLAHFMLKERLQKM---------GILGC-ITCIVGSVV----IVIHAP- 126
               ++  +   L    L++ L ++         G+LG   T +   V     +      
Sbjct: 126 FAKYNVSRLQPYLK---LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 127 --------QEHTPNSVQEI-WALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL 177
                     ++P +V E+   L  Q D      +  S  + L +H      Q  +   L
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI----QAELRRLL 238

Query: 178 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTW--FFLTVAAVC---VVTQLNYLN 232
                   L             L L  +      + W  F L+    C   + T+     
Sbjct: 239 KSKPYENCL-------------LVLLNVQ---NAKAWNAFNLS----CKILLTTR----F 274

Query: 233 KAL-DTFNAAIVSPVYYVMFT-TLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTII 290
           K + D  +AA  + +     + TLT      +   +       +  E+         +II
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT-TNPRRLSII 333

Query: 291 LHATREHEQTTAPVGTVTW----YVSGDSLKGAEE---EHLITIHNSDYYVQ 335
             + R+           TW    +V+ D L    E     L        + +
Sbjct: 334 AESIRDG--------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	99.0
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.83
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.98
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.39

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=99.00  E-value=1.9e-09  Score=87.44  Aligned_cols=100  Identities=13%  Similarity=0.082  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhch-hhHHH
Q 019850           10 LILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSI   88 (335)
Q Consensus        10 vllAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl-~~~~l   88 (335)
                      -++-+++.++-+.|+.+.|++..               ..+.+.++.+.+++++++.+...++...|++.+.|+ .+++.
T Consensus         4 ~l~l~~a~~~e~~~~~~lK~s~~---------------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~   68 (110)
T 3b5d_A            4 YIYLGGAILAEVIGTTLMKFSEG---------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGI   68 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccC---------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHH
Confidence            35567788888999999998620               113456677888899999999999999999999999 89999


Q ss_pred             HHHHHHHHHHhccccccchhHHHHHHhhheeeEEEe
Q 019850           89 IISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  124 (335)
Q Consensus        89 v~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~  124 (335)
                      +++.+++.+++||++|+.+++|+.+++.|++++...
T Consensus        69 v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           69 VLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999998877543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.83  E-value=2.4e-09  Score=90.40  Aligned_cols=99  Identities=14%  Similarity=0.074  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccCCCccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhch-hhHHHH
Q 019850           11 ILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSII   89 (335)
Q Consensus        11 llAl~sa~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~Pl-~~~~lv   89 (335)
                      ++-+++.++-+.|+.+.|++.   .         .   .+.+.++.|++++++++.++..++...|++.+.|+ .+++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~---g---------~---~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE---G---------F---TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---c---------c---chHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            455677888899999999862   0         0   12355678889999999999999999999999999 899999


Q ss_pred             HHHHHHHHHhccccccchhHHHHHHhhheeeEEEe
Q 019850           90 ISAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  124 (335)
Q Consensus        90 ~~~~la~~~l~e~~~~~~~~g~~li~~G~~l~~~~  124 (335)
                      ++.+++.+++||+++..+++|+++++.|++++...
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999998877543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.98  E-value=2.1e-05  Score=66.11  Aligned_cols=69  Identities=16%  Similarity=0.267  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhcccc
Q 019850          221 AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  295 (335)
Q Consensus       221 ~~~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  295 (335)
                      +++...-.+++++++++.|++..+|+.....++.+.+.|.++|+|...  +.    -.+|.++++.|++++.+.+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls--~~----~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--LP----AIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHHhcCC
Confidence            334444566899999999999999998889999999999999999654  33    3578889999999997654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.39  E-value=0.0024  Score=51.15  Aligned_cols=67  Identities=18%  Similarity=0.289  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHHHHhhhcccc
Q 019850          223 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  295 (335)
Q Consensus       223 ~~l~Q~~~ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  295 (335)
                      +...-..+++.++|+.|...++|+.....++.+.+.|.++|+|..  ++.+    .+|..+++.|++++...+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~--s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC--CHHH----HHHHHHHHHHHHHHhcCC
Confidence            333445688899999999999999989999999999999999954  4443    578889999999997654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00