Citrus Sinensis ID: 019868

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV
Secondary Structure (PSIPRED)
cccccccccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHccccccccccccHHHHHHHHccccccEEEcccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHcccccEEEEccccccccHHHHHHcccEEEEEEccccccccHHHHHHHHcccccEEEEEccccccccccccHHHHHcHHccccEEEEEcccccccccccHHHHHHccccEEEEcccHHHHHHHHHcHHHccccHHHHHHHHcccccccccHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccccccccccccccHHcccccEEEcccccccHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHcHEEEcccHHHHHHHHHHHHcccccEEEEccccccccHHHHEHcccEEEEEEccccccccHHHHHHHHcccccEEEEEEccccccccEccHHHHHHHHccccEEEEEcccHHHcHHHccHHHHHHcccEEEEEEcccccccHHHccEEEEEcHHHHHHHHcccccccccHHHHHHHHHHcccccHccc
Coil and Loop (DISEMBL)
mgvietssssslcllksnfsshpfvvpnrtvcpfqgnqrrviamsstlpveqqvnegqrrltgDSFIRSHLrklkpyqpilpfevlsiqlgrkpedivkidanenpygpppevrealgqlkfpyiypdpesRRLRAALAKdsglesdhilvGCGADELIDLIMRCvldpgdkivdcpptftmyefdaavngaavvkvprksdfsLNVELIADAVErekpkcifltspnnpdgsiindeDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWrakqpynvSVAAEVAACAAlqnpiylev
Flexible Loop (DISEMBL)
mgvietssssslCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMsstlpveqqvnegqrrltGDSFIRSHLrklkpyqpilpFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCifltspnnpdgsiINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV
Low Complexity Region (SEG)
MGVIETssssslcllksnfssHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNvsvaaevaacaaLQNPIYLEV
Disordered region (IsUnstruct)
***********LCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAM*****************TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKI***************ALGQLKFPYIYP**********L****GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY*********************LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL**
Disordered Region (DISOPRED)
*G*****SSSSLCLLKSNFSSHPFVVP**TVCP**G*****************************FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV
Disordered Region (DISEMBL)
**********SLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV
Disordered Region (DISPRO)
*GVIE*SSSSSLCLLKS***S*PFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
Q9FEW2	413	Histidinol-phosphate amin	N/A	no	0.964	0.779	0.763	1e-139
O82030	413	Histidinol-phosphate amin	N/A	no	0.964	0.779	0.757	1e-139
P0DI07	417	Histidinol-phosphate amin	yes	no	0.976	0.781	0.736	1e-137
B9DHD3	417	Histidinol-phosphate amin	yes	no	0.976	0.781	0.736	1e-137
A5V022	370	Histidinol-phosphate amin	yes	no	0.787	0.710	0.513	1e-72
A7NFV2	371	Histidinol-phosphate amin	yes	no	0.739	0.665	0.513	3e-68
Q3Z879	358	Histidinol-phosphate amin	yes	no	0.745	0.695	0.421	2e-54
A5FR29	358	Histidinol-phosphate amin	yes	no	0.691	0.645	0.433	2e-52
Q3ZXL8	358	Histidinol-phosphate amin	yes	no	0.691	0.645	0.433	5e-52
Q58365	373	Histidinol-phosphate amin	yes	no	0.790	0.707	0.403	6e-49

>sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana plumbaginifolia GN=HPA PE=1 SV=1

 Score =  496 bits (1276), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/334 (76%), Positives = 291/334 (87%), Gaps = 12/334 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLE 323

Nicotiana plumbaginifolia (taxid: 4092)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 9

>sp|O82030|HIS8_TOBAC Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana tabacum GN=HPA PE=2 SV=1

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/334 (75%), Positives = 290/334 (86%), Gaps = 12/334 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++  S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRAKPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSI++DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIVDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLE 323

Nicotiana tabacum (taxid: 4097)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|P0DI07|HIS8B_ARATH Histidinol-phosphate aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=HPA2 PE=2 SV=1

 Score =  486 bits (1252), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/334 (73%), Positives = 275/334 (82%), Gaps = 8/334 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLE 327

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|B9DHD3|HIS8A_ARATH Histidinol-phosphate aminotransferase 1, chloroplastic OS=Arabidopsis thaliana GN=HPA1 PE=2 SV=1

 Score =  486 bits (1252), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/334 (73%), Positives = 275/334 (82%), Gaps = 8/334 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLE 327

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5V022|HIS8_ROSS1 Histidinol-phosphate aminotransferase OS=Roseiflexus sp. (strain RS-1) GN=hisC PE=3 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/269 (51%), Positives = 187/269 (69%), Gaps = 6/269 (2%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLK--F 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPHALAALAAVERDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDL+MR  L PGD ++DCPPT
Sbjct: 67  PHRYAIYPDPDHVRLRAALSRYIGQPPERIICGAGSDELIDLLMRATLRPGDTMIDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA VV VPR   F +++E +A+AVERE  K +FL +PNNP G+ +   D
Sbjct: 127 FAMYSFDAALYGARVVPVPRTDQFDVDIEGVAEAVEREGAKLLFLAAPNNPTGTPLARSD 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVVDMVGACPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQN 328
            +  Y+W+ KQPYNV+VAAEVAA A+L +
Sbjct: 246 DVAAYVWKIKQPYNVNVAAEVAAIASLDD 274

Roseiflexus sp. (strain RS-1) (taxid: 357808)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A7NFV2|HIS8_ROSCS Histidinol-phosphate aminotransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=hisC PE=3 SV=1

 Score =  259 bits (661), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/253 (51%), Positives = 174/253 (68%), Gaps = 6/253 (2%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKF-- 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPRALAALAAVEHDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDLIMR VL PGD +VDCPPT
Sbjct: 67  PHRYAIYPDPDHTRLRAALSRYVGQPPERIICGAGSDELIDLIMRAVLRPGDVMVDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA +V VPR   F ++VE +A+AVER+  K +FL +PNNP G+ +    
Sbjct: 127 FAMYSFDAALYGARIVAVPRTEQFDVDVEGVAEAVERDGAKLLFLAAPNNPTGTPLARTT 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVIDLVGTRPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPY 312
            +I YLW+ KQPY
Sbjct: 246 DVITYLWKIKQPY 258

Roseiflexus castenholzii (strain DSM 13941 / HLO8) (taxid: 383372)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3Z879|HIS8_DEHE1 Histidinol-phosphate aminotransferase OS=Dehalococcoides ethenogenes (strain 195) GN=hisC PE=3 SV=1

 Score =  213 bits (542), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 166/256 (64%), Gaps = 7/256 (2%)

Query: 66  FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYI 125
           +IR+ L     Y      E++  +       I+K+DANEN YG  P V++A+      +I
Sbjct: 8   YIRTDLEGFAGYSACKAPELVKTK-----NRIIKLDANENLYGAAPTVQKAMSTFDQYHI 62

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     +R  LA+ +G+  + I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F
Sbjct: 63  YPDATQFEIRRLLAEYTGVNMEQIICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKF 122

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              +N   VV VPR + + +N+  I +A+   K K IF+ +PNNP G+ I+ ED+ +IL+
Sbjct: 123 YTDLNRGTVVNVPRDAGYDVNIGGIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILD 181

Query: 246 MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
           + +  V+DEAY EF+G ++ +  +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL
Sbjct: 182 LGVPTVIDEAYYEFTG-QTMVTDMPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYL 240

Query: 306 WRAKQPYNVSVAAEVA 321
            R K PY+V++AA+ A
Sbjct: 241 SRIKDPYSVNIAADAA 256

Dehalococcoides ethenogenes (strain 195) (taxid: 243164)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5FR29|HIS8_DEHSB Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain BAV1) GN=hisC PE=3 SV=1

 Score =  206 bits (524), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 160/233 (68%), Gaps = 2/233 (0%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKQIIKLDANENLYGAAPTVRQAMSEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA 321
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAA 256

Dehalococcoides sp. (strain BAV1) (taxid: 216389)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3ZXL8|HIS8_DEHSC Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain CBDB1) GN=hisC PE=3 SV=1

 Score =  205 bits (521), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 160/233 (68%), Gaps = 2/233 (0%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKLIIKLDANENLYGAAPTVRQAMAEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA 321
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAA 256

Dehalococcoides sp. (strain CBDB1) (taxid: 255470)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q58365|HIS8_METJA Histidinol-phosphate aminotransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=hisC PE=3 SV=1

 Score =  194 bits (494), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/275 (40%), Positives = 174/275 (63%), Gaps = 11/275 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYI 125
           +R  ++KLKPY P    E ++   G KPEDI+K+ +NENP+GP P+++E  L ++   + 
Sbjct: 10  VRDVVKKLKPYVPGKSKEEIARAYGIKPEDIIKLGSNENPWGPSPKIKEKILDEIDKIHQ 69

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGC-GADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P +  L   L+K   ++ ++I+VG  GADE+ID I R  +D GD+++   PTFT Y 
Sbjct: 70  YPEPVNPILMKELSKFLNVDEENIIVGGDGADEIIDTIFRTFVDDGDEVIIPIPTFTQYR 129

Query: 185 FDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
             A ++ A +   K  ++ DF LNVE + + +  +K K IFL +PNNP G+II + D+ +
Sbjct: 130 VSATIHNAKIKYAKYDKEKDFKLNVESVLNNI-TDKTKVIFLCTPNNPTGNIIENRDVER 188

Query: 243 IL-EMPILVVLDEAYTEFSGLESRMEWVKK---HDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ E   LVV+D AY E++  E   +W +K   +DN+IVLRTFSK  GLAG+RVGYG   
Sbjct: 189 VINETDALVVIDHAYIEYAKKE--YDWTQKAPEYDNVIVLRTFSKVFGLAGMRVGYGVAN 246

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
             II+Y+ R K  ++++  ++V A  AL++  + E
Sbjct: 247 KKIIDYMMRVKPIFSLTRLSQVCAITALRDREFFE 281

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
255564464	423	histidinol-phosphate aminotransferase, p	0.997	0.787	0.823	1e-159
356559575	424	PREDICTED: histidinol-phosphate aminotra	0.994	0.783	0.791	1e-152
359493094	421	PREDICTED: histidinol-phosphate aminotra	0.991	0.786	0.795	1e-151
255647696	394	unknown [Glycine max]	0.994	0.842	0.788	1e-151
296081156	375	unnamed protein product [Vitis vinifera]	0.853	0.76	0.863	1e-142
212275482	417	uncharacterized protein LOC100191987 [Ze	0.919	0.736	0.787	1e-141
195640672	417	histidinol-phosphate aminotransferase [Z	0.919	0.736	0.787	1e-140
449496869	421	PREDICTED: histidinol-phosphate aminotra	0.970	0.769	0.755	1e-138
449465360	421	PREDICTED: histidinol-phosphate aminotra	0.970	0.769	0.755	1e-138
51316088	413	RecName: Full=Histidinol-phosphate amino	0.964	0.779	0.763	1e-138

>gi|255564464|ref|XP_002523228.1| histidinol-phosphate aminotransferase, putative [Ricinus communis] gi|223537524|gb|EEF39149.1| histidinol-phosphate aminotransferase, putative [Ricinus communis]

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/335 (82%), Positives = 299/335 (89%), Gaps = 2/335 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQ-GNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI+  +++SLCL+KS+ S H  ++P R +C F+  N+RRVIAM+S  PVE  +NE Q 
Sbjct: 1   MGVIDIYNTASLCLIKSSHSLHQSLLPQRRICSFEVNNRRRVIAMASFTPVEH-INEAQE 59

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
           R+ GDSFIRSHLRKL PYQPILPFEVLS  LGRKPEDIVK+DANENPYGPPPE  EALG 
Sbjct: 60  RVAGDSFIRSHLRKLSPYQPILPFEVLSASLGRKPEDIVKLDANENPYGPPPEATEALGS 119

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           LKFPYIYPDPESRRLR ALAKDS LES+HILVGCGADELIDLIMRC LDPGDKIVDCPPT
Sbjct: 120 LKFPYIYPDPESRRLREALAKDSDLESNHILVGCGADELIDLIMRCTLDPGDKIVDCPPT 179

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KV RK DFSLNVELI DAV REKPKCIFLTSPNNPDGSII+DED
Sbjct: 180 FTMYEFDAAVNGAEVIKVMRKPDFSLNVELIVDAVLREKPKCIFLTSPNNPDGSIISDED 239

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILVVLDEAY EFSGLESRM+WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 240 LLKILQLPILVVLDEAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPS 299

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV 334
           SIIEYLWRAKQPYNVSVAAEV+ACAAL+NP YLE 
Sbjct: 300 SIIEYLWRAKQPYNVSVAAEVSACAALENPTYLET 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559575|ref|XP_003548074.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Glycine max]

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/335 (79%), Positives = 299/335 (89%), Gaps = 3/335 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFV-VPNRTVCPFQGN-QRRVIAMSSTLPVEQQVNEGQ 58
           MGVI+  ++ +LC +KSN +    V +  R +C F+GN QR+ +AM+ST+PVEQ VN G 
Sbjct: 1   MGVIDFYNTGALCWVKSNANLKQQVGLAPRPICSFEGNNQRKFVAMASTVPVEQ-VNNGP 59

Query: 59  RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALG 118
            ++TGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG
Sbjct: 60  LQVTGDSFIREHLRKLAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALG 119

Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
            ++FPY+YPDPESRRLRAALA DSGLE+++IL GCGADELIDLIMRCVLDPGDKIVDCPP
Sbjct: 120 SMQFPYVYPDPESRRLRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPP 179

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           TFTMYEFDAAVNGA V+KVPR+ DFSLNVE IA+ V++EKPKCIFLTSPNNPDGSII+DE
Sbjct: 180 TFTMYEFDAAVNGALVIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDE 239

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
            LLKILE+PILV+LDEAY EFS +ESRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP
Sbjct: 240 VLLKILELPILVILDEAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 299

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           LSIIEYLWRAKQPYNVSVAAE++ACAALQNP YLE
Sbjct: 300 LSIIEYLWRAKQPYNVSVAAEISACAALQNPTYLE 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493094|ref|XP_003634508.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Vitis vinifera]

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/333 (79%), Positives = 291/333 (87%), Gaps = 2/333 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRR 60
           MGVI     SSLC++K N   H  + P   +C F+G ++ V  M+S +PV +Q +E Q R
Sbjct: 1   MGVINIYDISSLCVVKHNTDIH-LLEPRAPICSFEGRRKGVTCMTSAMPV-KQASEVQER 58

Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           LTGDSFIR HL+ L PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG L
Sbjct: 59  LTGDSFIRPHLKNLSPYQPILPFEVLSSRLGRKPEDIVKLDANENPYGPPPEVFEALGSL 118

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
           KFPY+YPDPESRRLR ALA+DSG+ESD+IL GCGADELIDLIMRCVLDPGDKIVDCPPTF
Sbjct: 119 KFPYVYPDPESRRLRGALAEDSGIESDYILAGCGADELIDLIMRCVLDPGDKIVDCPPTF 178

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
           TMYEFDAAVNGA V+KVPR SDFSLN+E IAD VE+EKPKCIFLTSPNNPDGSIINDE L
Sbjct: 179 TMYEFDAAVNGALVLKVPRNSDFSLNLEAIADVVEKEKPKCIFLTSPNNPDGSIINDEIL 238

Query: 241 LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           LKILE+PILVVLDEAY EFSG++SRM WVKK +NLIVLRTFSKRAGLAGLRVGYGAFPLS
Sbjct: 239 LKILELPILVVLDEAYIEFSGIKSRMGWVKKFENLIVLRTFSKRAGLAGLRVGYGAFPLS 298

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           IIEYLWRAKQPYNVSVAAEV+ACAALQNP YLE
Sbjct: 299 IIEYLWRAKQPYNVSVAAEVSACAALQNPAYLE 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647696|gb|ACU24309.1| unknown [Glycine max]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/335 (78%), Positives = 298/335 (88%), Gaps = 3/335 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFV-VPNRTVCPFQGN-QRRVIAMSSTLPVEQQVNEGQ 58
           MGVI+  ++ +LC +KSN +    V +  R +C F+GN QR+ +AM+ST+PVEQ VN G 
Sbjct: 1   MGVIDFYNTGALCWVKSNANLKQQVGLAPRPICSFEGNNQRKFVAMASTVPVEQ-VNNGP 59

Query: 59  RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALG 118
            ++TGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG
Sbjct: 60  LQVTGDSFIREHLRKLAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALG 119

Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
            ++FPY+YPDPESRRLRAALA DSGLE+++IL GCGADELIDLIMRCVLDPGDKIVDCPP
Sbjct: 120 SMQFPYVYPDPESRRLRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPP 179

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           TFTMYEFDAAVNGA V+KVPR+ DFSLNVE IA+ V++EKPKCIFLTSPNNP GSII+DE
Sbjct: 180 TFTMYEFDAAVNGALVIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPGGSIIDDE 239

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
            LLKILE+PILV+LDEAY EFS +ESRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP
Sbjct: 240 VLLKILELPILVILDEAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 299

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           LSIIEYLWRAKQPYNVSVAAE++ACAALQNP YLE
Sbjct: 300 LSIIEYLWRAKQPYNVSVAAEISACAALQNPTYLE 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081156|emb|CBI18182.3| unnamed protein product [Vitis vinifera]

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/286 (86%), Positives = 265/286 (92%), Gaps = 1/286 (0%)

Query: 48  LPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPY 107
           +PV +Q +E Q RLTGDSFIR HL+ L PYQPILPFEVLS +LGRKPEDIVK+DANENPY
Sbjct: 1   MPV-KQASEVQERLTGDSFIRPHLKNLSPYQPILPFEVLSSRLGRKPEDIVKLDANENPY 59

Query: 108 GPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167
           GPPPEV EALG LKFPY+YPDPESRRLR ALA+DSG+ESD+IL GCGADELIDLIMRCVL
Sbjct: 60  GPPPEVFEALGSLKFPYVYPDPESRRLRGALAEDSGIESDYILAGCGADELIDLIMRCVL 119

Query: 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227
           DPGDKIVDCPPTFTMYEFDAAVNGA V+KVPR SDFSLN+E IAD VE+EKPKCIFLTSP
Sbjct: 120 DPGDKIVDCPPTFTMYEFDAAVNGALVLKVPRNSDFSLNLEAIADVVEKEKPKCIFLTSP 179

Query: 228 NNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL 287
           NNPDGSIINDE LLKILE+PILVVLDEAY EFSG++SRM WVKK +NLIVLRTFSKRAGL
Sbjct: 180 NNPDGSIINDEILLKILELPILVVLDEAYIEFSGIKSRMGWVKKFENLIVLRTFSKRAGL 239

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV+ACAALQNP YLE
Sbjct: 240 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPAYLE 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212275482|ref|NP_001130883.1| uncharacterized protein LOC100191987 [Zea mays] gi|194690352|gb|ACF79260.1| unknown [Zea mays] gi|224028727|gb|ACN33439.1| unknown [Zea mays] gi|413938505|gb|AFW73056.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/315 (78%), Positives = 274/315 (86%), Gaps = 8/315 (2%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQ--QVNEGQRRLTGDSFIRSHLRKLKPYQ 78
           P+     F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAASHFAGHRRSQADRVFLRTMASAAPVEEPTAAAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DSGLESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSGLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQEMPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLE 333
           EV+ACAALQNP YLE
Sbjct: 312 EVSACAALQNPTYLE 326

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195640672|gb|ACG39804.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/315 (78%), Positives = 275/315 (87%), Gaps = 8/315 (2%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQ--QVNEGQRRLTGDSFIRSHLRKLKPYQ 78
           P+  V  F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAVSHFAGHRRSQADRVFLRTMASAAPVEEPTAXAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DS LESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSRLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E+PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQERPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLE 333
           EV+ACAALQNP YLE
Sbjct: 312 EVSACAALQNPTYLE 326

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496869|ref|XP_004160249.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 287/340 (84%), Gaps = 16/340 (4%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLE
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLE 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465360|ref|XP_004150396.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 287/340 (84%), Gaps = 16/340 (4%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLE
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLE 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51316088|sp|Q9FEW2.1|HIS8_NICPL RecName: Full=Histidinol-phosphate aminotransferase, chloroplastic; AltName: Full=Imidazole acetol-phosphate transaminase; Flags: Precursor gi|12055099|emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana plumbaginifolia]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/334 (76%), Positives = 291/334 (87%), Gaps = 12/334 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLE 323

Source: Nicotiana plumbaginifolia

Species: Nicotiana plumbaginifolia

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2016099	417	HISN6B "HISTIDINE BIOSYNTHESIS	0.892	0.714	0.754	1.8e-119
TAIR|locus:2145382	417	HPA1 "histidinol phosphate ami	0.892	0.714	0.754	1.8e-119
TIGR_CMR|DET_0843	358	DET_0843 "histidinol-phosphate	0.667	0.622	0.444	2e-49
TIGR_CMR|CHY_1086	349	CHY_1086 "histidinol-phosphate	0.700	0.670	0.369	1.1e-37
TIGR_CMR|BA_1539	370	BA_1539 "histidinol-phosphate	0.787	0.710	0.339	1.7e-36
TIGR_CMR|CHY_1929	362	CHY_1929 "histidinol-phosphate	0.778	0.718	0.365	2.7e-36
ASPGD|ASPL0000053485	447	AN0717 [Emericella nidulans (t	0.625	0.467	0.373	3.9e-35
TIGR_CMR|SPO_3177	361	SPO_3177 "histidinol-phosphate	0.646	0.598	0.363	8.3e-35
TIGR_CMR|BA_2955	366	BA_2955 "histidinol-phosphate	0.727	0.663	0.334	9.8e-32
TIGR_CMR|DET_0655	368	DET_0655 "histidinol-phosphate	0.790	0.717	0.312	5.4e-31

TAIR|locus:2016099 HISN6B "HISTIDINE BIOSYNTHESIS 6B" [Arabidopsis thaliana (taxid:3702)]

 Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
 Identities = 227/301 (75%), Positives = 252/301 (83%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 E 333
             E
Sbjct:   327 E 327

GO:0000105 "histidine biosynthetic process" evidence=IEA;IGI

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2145382 HPA1 "histidinol phosphate aminotransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
 Identities = 227/301 (75%), Positives = 252/301 (83%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 E 333
             E
Sbjct:   327 E 327

GO:0000105 "histidine biosynthetic process" evidence=IEA;TAS

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TIGR_CMR|DET_0843 DET_0843 "histidinol-phosphate aminotransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 100/225 (44%), Positives = 152/225 (67%)

Query:    89 QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
             +L +    I+K+DANEN YG  P V++A+      +IYPD     +R  LA+ +G+  + 
Sbjct:    26 ELVKTKNRIIKLDANENLYGAAPTVQKAMSTFDQYHIYPDATQFEIRRLLAEYTGVNMEQ 85

Query:   149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
             I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   VV VPR + + +N+ 
Sbjct:    86 IICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTDLNRGTVVNVPRDAGYDVNIG 145

Query:   209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
              I +A+   K K IF+ +PNNP G+ I+ ED+ +IL++ +  V+DEAY EF+G ++ +  
Sbjct:   146 GIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILDLGVPTVIDEAYYEFTG-QTMVTD 203

Query:   269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
             +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+
Sbjct:   204 MPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYLSRIKDPYS 248

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1086 CHY_1086 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 93/252 (36%), Positives = 148/252 (58%)

Query:    66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP----EVREALGQLK 121
             + +    +LKPY+P L    +S +        +K+DANENPY  P     E+   +G   
Sbjct:     6 YFKEAFAQLKPYEPHL----VSYE--------IKLDANENPYLFPKSLLEEIFSKIGTRD 53

Query:   122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
             FP +YPDP + RLR  L++  G+  ++I++G G+DELI  +       G   +   P+F 
Sbjct:    54 FP-LYPDPLAGRLRIRLSEKLGVLPENIVLGNGSDELILCLYLAFGGYGRIALSFSPSFV 112

Query:   182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
             MY   A V      +V  + DFSL+++    A+E+ +P  +FL +PNNP G++++ E + 
Sbjct:   113 MYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNNPTGTLVDIETIK 172

Query:   242 KILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
             K+L    L+V+DEAY EFSG+ S ++ +KK+ NL++LRTFSK   LAGLR+GY    + +
Sbjct:   173 KLLAYDHLLVVDEAYVEFSGV-SAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDV 231

Query:   302 IEYLWRAKQPYN 313
             ++ + + K PYN
Sbjct:   232 VKEIIKVKNPYN 243

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_1539 BA_1539 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 93/274 (33%), Positives = 149/274 (54%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+ Y P    E +  + G     IVK+ +NENP+G    V EAL  L   Y +
Sbjct:     3 VKEQLLTLRAYVPGKNIEEVKREYGLSK--IVKLASNENPFGCSARVTEALTSLASQYAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +AK  G++++ +L G G DE+I +I R +L  G  +V   PTF+ Y  
Sbjct:    61 YPDGHAFELRTQVAKHLGVKAEQLLFGSGLDEVIQMISRALLHEGTNVVMANPTFSQYHH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + GA V +V  K     +++ +   V+ ++ K +++ +PNNP G+ +  + LL  LE
Sbjct:   121 HAVIEGAEVREVSLKDGIH-DLDAMLQQVD-DQTKIVWICNPNNPTGTYVEKQKLLSFLE 178

Query:   246 -MP--ILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
              +P   LV++DEAY E++G E     +  ++K++NL+VLRTFSK  GLA  R+GY     
Sbjct:   179 SVPKSALVIMDEAYYEYAGAEDYPQTLPLLEKYENLMVLRTFSKAYGLAAFRIGYAVGNT 238

Query:   300 SIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLE 333
              +I  L  A+ P+N            L++  +L+
Sbjct:   239 ELIGQLEVARLPFNTSTVAQSVALAALEDQAFLQ 272

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1929 CHY_1929 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 101/276 (36%), Positives = 157/276 (56%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
             +R  L  LKPY P  P E +  +LG    +I K+ +NEN +G  P+V  A+ +   K  Y
Sbjct:     2 VRKALENLKPYVPGKPVEEVERELGIT--NIDKLASNENLWGISPKVAAAIKEAVDKVNY 59

Query:   125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
              YPD  + RL+  +A   G+  D+I++G G+DEL+  +   ++DPGD+ +   P+F  YE
Sbjct:    60 -YPDGGAFRLKEKIAAKYGVTPDNIILGNGSDELVMFLAMALIDPGDEAIMPVPSFPRYE 118

Query:   185 -FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                  +NG A  ++P K +  L+++ +A+AV  EK + ++L +PNNP G+ I   +L + 
Sbjct:   119 PVVTMMNGIAR-EIPLK-EHRLDLKTMAEAVN-EKTRLVYLCNPNNPTGTYITKGELEEF 175

Query:   244 LE-MP--ILVVLDEAYTEFSGL----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             LE +P  ++VVLDEAY EF+ L       + + KK  N +VLRTFSK  GLAGLRVGYG 
Sbjct:   176 LERVPEEVVVVLDEAYFEFARLFNDYPDGLNFFKKRPNTVVLRTFSKAYGLAGLRVGYGF 235

Query:   297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
              P ++ + +   + P+N            L +  Y+
Sbjct:   236 APENLAKAINSLRPPFNVNFLAQMAAVAALDDEEYV 271

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

ASPGD|ASPL0000053485 AN0717 [Emericella nidulans (taxid:162425)]

 Score = 346 (126.9 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 84/225 (37%), Positives = 118/225 (52%)

Query:   126 YPDPESRRLRAALAK--------DSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDC 176
             YPDP    L+             D  +  +++ VG G+DE ID ++R    PG DKI+ C
Sbjct:   104 YPDPHQHPLKQLFCNIRNTHTHTDKTITPENLFVGVGSDEAIDALLRAFCVPGKDKILTC 163

Query:   177 PPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKP-KCIFLTSPNNPDGS 233
             PPT+ MY   A VN   +VKVP  +D  F+L  E I  A+  +   K +++ SP NP  +
Sbjct:   164 PPTYGMYSVSADVNDVEIVKVPLDTDNGFALQPEKINAALSADPTIKLVYICSPGNPTAT 223

Query:   234 IINDEDLLKILEMPI---LVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAG 289
             +++  D+ K+LE P    +VVLDEAY +F+   S + EWV +  NL+V++T SK  GLAG
Sbjct:   224 LVSKSDIQKVLEHPTWNGVVVLDEAYIDFAPEGSSLAEWVAEWPNLVVMQTLSKAFGLAG 283

Query:   290 LRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEV 334
             +R+G       I   L   K PYN            L NP  LEV
Sbjct:   284 IRLGVAFTSPEIATLLNSLKAPYNISSPTSALAMAALGNPKNLEV 328

GO:0006547 "histidine metabolic process" evidence=RCA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000105 "histidine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0010045 "response to nickel cation" evidence=IEA

TIGR_CMR|SPO_3177 SPO_3177 "histidinol-phosphate aminotransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 81/223 (36%), Positives = 132/223 (59%)

Query:    96 DIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCG 154
             +++K+ +NENP GP P   EA+       + YP  +   LRAA+    GL+ D I+ G G
Sbjct:    28 NVIKLSSNENPLGPSPAAVEAIRATAAQAHRYPSTDHAELRAAIGAVHGLDPDRIICGVG 87

Query:   155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214
             +DE++  + +    PGD+++     F+MY   A + GA  V+VP +    ++V+ I  AV
Sbjct:    88 SDEVLQFVAQAYTGPGDEVIHTEHGFSMYPILARMAGATPVQVPERQRV-VDVDAILAAV 146

Query:   215 EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLDEAYTEF-SGLESRMEWVK 270
               ++ + +FL +P NP G++I++ ++ ++ + +P  +L+VLD AY EF  G +     V 
Sbjct:   147 N-DRTRLVFLANPANPTGTMISEAEVTRLADGLPGHVLLVLDGAYAEFVEGFDGGAALVS 205

Query:   271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
               DN+I+ RTFSK  GL GLR+G+G  P  II+ L R +QP+N
Sbjct:   206 ARDNVIMTRTFSKIYGLGGLRIGWGYAPREIIDVLNRIRQPFN 248

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_2955 BA_2955 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 85/254 (33%), Positives = 133/254 (52%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+PY+P    E +    G      VK+ +NENP+G  P V + L +    + +
Sbjct:     3 VKDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV    TF  Y  
Sbjct:    61 YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQMISRAVLKAGDNIVTAGATFPQYRH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + G  V +V   +    +++ I+  V+ +  K +++ +PNNP G+ +ND  L + +E
Sbjct:   121 HAIIEGCEVKEVALNNGV-YDLDEISSVVDNDT-KIVWICNPNNPTGTYVNDRKLTQFIE 178

Query:   246 ---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
                   L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  RVGY     
Sbjct:   179 GISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238

Query:   300 SIIEYLWRAKQPYN 313
              +IE L   + P+N
Sbjct:   239 ELIEKLNVVRLPFN 252

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|DET_0655 DET_0655 "histidinol-phosphate aminotransferase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 84/269 (31%), Positives = 138/269 (51%)

Query:    68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
             +  + KLKP     P      +LG  P+ ++    + NPY  P E++ AL  L     YP
Sbjct:     6 KPQVEKLKPCYHGGPNYAELRKLGISPDAVMDFSVSSNPYPAPVELKNALCSLVIDR-YP 64

Query:   128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
             D +S  L+  LA    L+ +++++G G+ E+I L+       GD ++   PTF  YE  A
Sbjct:    65 DSDSAELKEYLAGRLSLKPENLIMGNGSMEIIRLVAGAYFGVGDTVLILKPTFGEYELAA 124

Query:   188 AVNGAAVVK--VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              V GA +++     +S F  +++L    +++ +PK +F+ +PNNP G  ++  D+ K+L 
Sbjct:   125 EVAGADIIEQWADEESGFKFDLDLTCRIIKKHQPKAVFICNPNNPTGVYLSKADIEKVLS 184

Query:   246 M--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
             +    L+VLDEAY  F+    +   + +  N+IV+R+ +K   LAGLR+GYG     II 
Sbjct:   185 VCTDTLLVLDEAYIAFAEGGWKSTDLLETGNIIVIRSMTKDCALAGLRLGYGMASAEIIT 244

Query:   304 YLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
              L +   P+N            L +P YL
Sbjct:   245 NLKKVCPPWNVNSAAQKAGLVCLCHPSYL 273

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82030	HIS8_TOBAC	2, ., 6, ., 1, ., 9	0.7574	0.9640	0.7796	N/A	no
P0DI07	HIS8B_ARATH	2, ., 6, ., 1, ., 9	0.7365	0.9760	0.7817	yes	no
A5V022	HIS8_ROSS1	2, ., 6, ., 1, ., 9	0.5130	0.7874	0.7108	yes	no
Q9FEW2	HIS8_NICPL	2, ., 6, ., 1, ., 9	0.7634	0.9640	0.7796	N/A	no
A7NFV2	HIS8_ROSCS	2, ., 6, ., 1, ., 9	0.5138	0.7395	0.6657	yes	no
B9DHD3	HIS8A_ARATH	2, ., 6, ., 1, ., 9	0.7365	0.9760	0.7817	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.976
4th Layer	2.6.1.9	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	334
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	0.0
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	2e-91
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	5e-85
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	6e-85
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	4e-80
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	5e-75
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	5e-61
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	8e-59
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	1e-57
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	4e-54
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	6e-53
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	8e-53
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	3e-47
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	4e-46
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	1e-44
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	1e-43
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	2e-43
PRK05387	353	PRK05387, PRK05387, histidinol-phosphate aminotran	6e-43
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	4e-42
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	5e-40
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	4e-39
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	6e-39
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	6e-38
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	1e-37
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	3e-36
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	3e-34
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	1e-30
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	7e-28
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	6e-23
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	6e-23
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	8e-22
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	1e-20
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	3e-20
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	8e-20
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	5e-19
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	1e-16
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	7e-16
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	1e-15
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	4e-14
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	5e-14
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	2e-13
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	2e-13
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	6e-13
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	5e-12
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	1e-11
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	2e-10
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	2e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	3e-10
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	9e-10
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	1e-09
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	1e-09
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	2e-09
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	3e-09
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	4e-09
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	5e-09
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	7e-09
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	9e-09
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	2e-08
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	4e-08
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	6e-08
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	1e-07
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	2e-07
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	6e-07
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	6e-07
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-06
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	2e-06
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	5e-06
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	7e-06
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	1e-05
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	2e-05
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	2e-05
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	2e-05
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-05
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	4e-05
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	8e-05
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	8e-05
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	9e-05
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	2e-04
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	2e-04
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	2e-04
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	4e-04
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	5e-04
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	8e-04
TIGR01977	376	TIGR01977, am_tr_V_EF2568, cysteine desulfurase fa	0.001
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	0.001
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	0.001
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	0.001
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	0.002
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	0.003
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	0.004

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score =  544 bits (1403), Expect = 0.0
 Identities = 231/282 (81%), Positives = 255/282 (90%)

Query: 52  QQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP 111
             ++E ++  +GDSFIR H+ +L PYQPILPFEVLS QLGRKPEDIVK+DANENPYGPPP
Sbjct: 9   TAMSEVKQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPP 68

Query: 112 EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171
           EV EALG +KFPY+YPDPESRRLRAALA+DSGLES++ILVGCGADELIDL+MRCVLDPGD
Sbjct: 69  EVLEALGNMKFPYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGD 128

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231
           KI+DCPPTF MY FDAAVNGA V+KVPR  DFSL+V  I +AVE  KPK +FLTSPNNPD
Sbjct: 129 KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPD 188

Query: 232 GSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           GSII+D+DLLKILE+PILVVLDEAY EFS  ESRM+WVKK+DNLIVLRTFSKRAGLAGLR
Sbjct: 189 GSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLR 248

Query: 292 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL NP YLE
Sbjct: 249 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLE 290

Length = 380

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  276 bits (708), Expect = 2e-91
 Identities = 115/270 (42%), Positives = 174/270 (64%), Gaps = 14/270 (5%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP-YIY 126
           R  ++ L PYQP               ++++K+++NENP+GPPP+ +EAL       + Y
Sbjct: 1   RPDIKNLSPYQPARELGG---------KEVIKLNSNENPFGPPPKAKEALRAEADKLHRY 51

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PDP+   L+ ALA   G++ + IL+G G+DE+I+L++R  L+PGD ++  PPT++MYE  
Sbjct: 52  PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEIS 111

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A ++GA VVKVP   D  L++E I  A++ +KPK +FL SPNNP G++++  D+  +LE 
Sbjct: 112 AKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLER 170

Query: 247 PI---LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                LVV+DEAY EFSG  S +  + ++ NLIVLRT SK  GLAGLR+GY      II+
Sbjct: 171 TPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIID 230

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
            L + + P+N+S  A+ AA AAL++  ++E
Sbjct: 231 ALNKVRAPFNLSRLAQAAAIAALRDDDFIE 260

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score =  260 bits (666), Expect = 5e-85
 Identities = 119/270 (44%), Positives = 179/270 (66%), Gaps = 5/270 (1%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           IR+ ++++KPY P    E ++ + G  PE I+K+ +NENP GP P+  EA+ + L   + 
Sbjct: 6   IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHR 65

Query: 126 YPDPESRRLRAALAKDSGLESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P++  LR AL+K +G+  ++I+V G G DE+ID +MR  +DPGD+++   PTF+ YE
Sbjct: 66  YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE 125

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A  +GA  V   R+ DFSL+V+ + +A+  EK K IFL +PNNP G++I +ED+ KIL
Sbjct: 126 ISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFLCTPNNPTGNLIPEEDIRKIL 184

Query: 245 E-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           E    LV +DEAY EF+  +       ++DNLI+ RTFSK  GLAGLR+GYG  P  +I+
Sbjct: 185 ESTDALVFVDEAYVEFAEYDYT-PLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           Y  RAK P++++  ++ AA AAL +  Y+E
Sbjct: 244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIE 273

Length = 361

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  259 bits (665), Expect = 6e-85
 Identities = 126/272 (46%), Positives = 171/272 (62%), Gaps = 16/272 (5%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  +R L PY P                 I+K+ +NENPYGPPP+V EA+   L     
Sbjct: 2   LRPLVRDLPPYVPG--------ARQYGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNR 53

Query: 126 YPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YPDP+ R LRAALA     ++ +++LVG G+DELI+L++R  ++PGD ++   PTF+MYE
Sbjct: 54  YPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE 113

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A + GA VVKVP K +F L+++ I  A+ R+K K +FL +PNNP G+++  E+L  +L
Sbjct: 114 IAAQLAGAEVVKVPLK-EFRLDLDAILAAI-RDKTKLVFLCNPNNPTGTLLPREELRALL 171

Query: 245 EMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
           E      LVV+DEAY EFS  ES +E +K   NLIVLRTFSK  GLAGLRVGY      +
Sbjct: 172 EALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230

Query: 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           I  L + + P+NVS  A  AA AAL++  YLE
Sbjct: 231 IAALNKVRPPFNVSSPALAAAIAALRDADYLE 262

Length = 356

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score =  248 bits (635), Expect = 4e-80
 Identities = 106/273 (38%), Positives = 160/273 (58%), Gaps = 11/273 (4%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIY 126
              +  + PY P  P E L  + G    DI+K+ +NENP GP P+  EA+       + Y
Sbjct: 7   NPGILDIAPYVPGKPIEELVREYG--IADIIKLASNENPLGPSPKAIEAIRAAADELHRY 64

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD     L+AALA+  G++ + I++G G+DE+++L+ R  L PGD+++     F +Y   
Sbjct: 65  PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIA 124

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A   GA  V+VP K D+  +++ +  AV   + + +F+ +PNNP G+ +  E++ + L  
Sbjct: 125 AQAVGAKPVEVPAK-DYGHDLDAMLAAVT-PRTRLVFIANPNNPTGTYLPAEEVERFLAG 182

Query: 246 MP--ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           +P  +LVVLDEAY E+      E  +E V K  N++V RTFSK  GLAGLRVGYG  P  
Sbjct: 183 VPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           II+ L R +QP+NV+  A  AA AAL +  ++E
Sbjct: 243 IIDALNRVRQPFNVNSLALAAAVAALDDDAFVE 275

Length = 367

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score =  234 bits (600), Expect = 5e-75
 Identities = 114/274 (41%), Positives = 169/274 (61%), Gaps = 11/274 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYI 125
           ++  L +L  YQP    E +  + G   E IVK+ +NENPYGP P+V+EA+   L    +
Sbjct: 3   MKEQLNQLSAYQPGKSIEEVKREYGL--EKIVKLASNENPYGPSPKVKEAIAAHLDELAL 60

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +AK  G++ + +L G G DE+I +I R +L+PG   V   PTF+ Y  
Sbjct: 61  YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH 120

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V +VP K D   ++E +  A++ E+ K +++ +PNNP G+ +N E+LL  LE
Sbjct: 121 NAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNPNNPTGTYVNHEELLSFLE 178

Query: 246 -MP--ILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   E     +  ++K++NLIVLRTFSK  GLA LRVGYG    
Sbjct: 179 SVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
            +IE L  A+ P+N +  A+ AA AAL++  +L+
Sbjct: 239 ELIEKLNIARPPFNTTRIAQYAAIAALEDQAFLK 272

Length = 359

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score =  198 bits (506), Expect = 5e-61
 Identities = 95/241 (39%), Positives = 140/241 (58%), Gaps = 7/241 (2%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGL-ESDHI 149
              +VK+DA ENPY  P E+R  LG+ L    +  YPDP +  L+AAL    G+     +
Sbjct: 25  ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADV 84

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           L+G G+DELI L+      PG  ++   P F MY   A + G   V VP  +DF+L++  
Sbjct: 85  LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPA 144

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEW 268
           +  A+   +P  +FL  PNNP G++ +D D+ +I+E  P LVV+DEAY  F+G +S +  
Sbjct: 145 MLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG-DSWLPR 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           + +  NL+V+RT SK  GLAGLR+GY A   + I  L + + PYNV+V  +  A  AL++
Sbjct: 204 LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH 262

Query: 329 P 329
            
Sbjct: 263 V 263

Length = 356

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score =  192 bits (489), Expect = 8e-59
 Identities = 103/260 (39%), Positives = 154/260 (59%), Gaps = 19/260 (7%)

Query: 79  PILPFEVLSIQLGRKPEDIVKI--DANENPYGPPPEVREALGQL-------KFPYIYPDP 129
            I    V S +  R  E   +I  D NENP+  P E++E + +        ++P+I  DP
Sbjct: 1   MIRE-LVKSFKPYRVVEGNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDP 59

Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               LR A+A+  GL++++I VG G+DELI  +++  L  G  IV  PPTF MY F A +
Sbjct: 60  ----LREAIAEFYGLDAENIAVGNGSDELISYLVK--LFEGKHIVITPPTFGMYSFYAKL 113

Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPIL 249
           NG  V+ VP K DF+++ E IA+  + +    +F+ SPNNP G++  +E++LK+LE    
Sbjct: 114 NGIPVIDVPLKEDFTIDGERIAE--KAKNASAVFICSPNNPTGNLQPEEEILKVLETGKP 171

Query: 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           VVLDEAY EFSG +S +  + ++ NLI+LRTFSK  GLAG+R GY      II+ L+R K
Sbjct: 172 VVLDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIK 230

Query: 310 QPYNVSVAAEVAACAALQNP 329
            P+++++        AL + 
Sbjct: 231 PPFSLNILTMKIVRLALDHY 250

Length = 337

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score =  189 bits (481), Expect = 1e-57
 Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 5/233 (2%)

Query: 99  KIDANENPYGPPPEVREALGQLKFPY---IYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           K+DANE P+  P EV + + ++       IYPDP + +LR  LA+   +   +I VG G+
Sbjct: 26  KMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGS 85

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215
           DE+I LIM   ++ GD ++   P+F MY   + + GA  + V  K D++ +V      +E
Sbjct: 86  DEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIE 145

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMPI-LVVLDEAYTEFSGLESRMEWVKKHDN 274
           + +PK +FL +PNNP GS+I  ED++KI+E    +VV+DEAY EF G  + ++ + + +N
Sbjct: 146 KYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYG-NTIVDVINEFEN 204

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327
           LIVLRT SK  GLAGLRVGY     +I++YL   K PYN++  ++V A   L+
Sbjct: 205 LIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLR 257

Length = 351

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  180 bits (459), Expect = 4e-54
 Identities = 82/253 (32%), Positives = 131/253 (51%), Gaps = 21/253 (8%)

Query: 98  VKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALAK------DSGLESD 147
           + +   E  + PPPEV EAL            YPDP    LR A+A+         +  +
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE 60

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
            I+V  GA E + L++R +L+PGD+++   PT+  YE  A + GA VV VP   +    +
Sbjct: 61  EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLL 120

Query: 208 ELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG- 261
           +L   +A +  K K ++L +PNNP G+++++E+L ++ E+     IL++ DEAY E    
Sbjct: 121 DLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180

Query: 262 --LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSV 316
                 +  +  ++ +IVLR+FSK  GL GLR+GY   P   +    +   PY     S 
Sbjct: 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPST 240

Query: 317 AAEVAACAALQNP 329
            ++ AA AAL + 
Sbjct: 241 LSQAAAAAALDDG 253

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score =  178 bits (452), Expect = 6e-53
 Identities = 103/277 (37%), Positives = 158/277 (57%), Gaps = 12/277 (4%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFP 123
           S  R+ +R L PY   L  E +  + G     I K+ +NENP GP P VR A   + +  
Sbjct: 8   SLARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELL 65

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP+ R LR A+A  +G+ +D I++G G+++LI +I R VL PGD++V   P+F ++
Sbjct: 66  RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLH 125

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           E    + GA V +V    D   +++ +  AV    P+ +  ++P+NP GS +  + L ++
Sbjct: 126 EDYPTMMGARVERVTVTPDLGFDLDALCAAV-ARAPRMLMFSNPSNPVGSWLTADQLARV 184

Query: 244 LEM---PILVVLDEAYTEFS---GLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYG- 295
           L+      L+V+DEAY E++      S +  +K      IVLRTFSK  GLAGLRVGYG 
Sbjct: 185 LDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL 332
                ++  L R + P+NV+ AA+ AA AAL +  +L
Sbjct: 245 VSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHL 281

Length = 371

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score =  177 bits (450), Expect = 8e-53
 Identities = 93/269 (34%), Positives = 148/269 (55%), Gaps = 19/269 (7%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  L  +  Y P           G+     +K+ +NE P+GP P VR A+ +       
Sbjct: 5   LRPDLAGIPAYVP-----------GKTVPGAIKLSSNETPFGPLPSVRAAIARAAAGVNR 53

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LRAALA+  G+  +H+ VGCG+  L   +++    PGD+++    +F  Y  
Sbjct: 54  YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI 113

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              V GA  V+VP   D + +++ +A A+  ++ + IF+ +PNNP G+++   +L + L+
Sbjct: 114 LVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLD 172

Query: 246 -MP--ILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   +     +E V+ H N++VLRTFSK  GLAGLRVGY     
Sbjct: 173 AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQN 328
            +I  L +   P++V+  A+ AA A+L  
Sbjct: 233 EVIAALRKVAVPFSVNSLAQAAAIASLAA 261

Length = 352

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score =  162 bits (413), Expect = 3e-47
 Identities = 92/279 (32%), Positives = 144/279 (51%), Gaps = 36/279 (12%)

Query: 67  IRSHLRKLKPY-QPILPFEVLSIQLGRKPEDI-VKIDANENPYGPPPE--------VREA 116
           +R  LR   PY  P         QL     D+ V+++ NENPY P P         V EA
Sbjct: 10  LRDDLRGKSPYGAP---------QL-----DVPVRLNTNENPYPPSPALVADIAEAVAEA 55

Query: 117 LGQLKFPYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADELIDLIMRCVLDPG 170
              L     YPD ++  LRA LA      +G  L  +++    G++E++  +++    PG
Sbjct: 56  AAGLNR---YPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPG 112

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
              +   P+++M+   A       V+ PR +DF+L+V+    A+   +P  +FLTSPNNP
Sbjct: 113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNP 172

Query: 231 DGSIINDEDLLKILE-MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKRAGL 287
            G+ +  +D+  IL+  P +VV+DEAY EF  SG  S +  + ++  L+V RT SK    
Sbjct: 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAF 232

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL 326
           AG R+GY A   ++++ L   + PY++S   + AA AAL
Sbjct: 233 AGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAAARAAL 271

Length = 368

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score =  159 bits (405), Expect = 4e-46
 Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 21/266 (7%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP 123
               R ++R L PYQ        + +LG   +  V ++ANE P     +    L Q    
Sbjct: 6   TDLARENVRALTPYQS-------ARRLGGNGD--VWLNANEYPTAVEFQ----LTQQTLN 52

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTM 182
             YP+ + + +    A  +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+ M
Sbjct: 53  R-YPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 111

Query: 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
           Y   A   G  +  VP   ++ L++  IAD ++    K +++ SPNNP G++IN +DL  
Sbjct: 112 YSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD--GVKVVYVCSPNNPTGNLINPQDLRT 169

Query: 243 ILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           +LE+     +VV DEAY EF    S   W+ ++ +L++LRT SK   LAGLR G+     
Sbjct: 170 LLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE 229

Query: 300 SIIEYLWRAKQPYNVSV-AAEVAACA 324
            +I  L +   PY +S   A++AA A
Sbjct: 230 EVINLLLKVIAPYPLSTPVADIAAQA 255

Length = 351

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score =  156 bits (395), Expect = 1e-44
 Identities = 91/264 (34%), Positives = 139/264 (52%), Gaps = 8/264 (3%)

Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRL 134
            Y+     E ++ +LG  P+D+VK+ +NENP+GP P   EA+    +  + YP      L
Sbjct: 11  AYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADL 70

Query: 135 RAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAV 194
            AALA    +  + + +  G D  +D + R +LDPGD ++   P F  Y   A  +   V
Sbjct: 71  TAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEV 130

Query: 195 VKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP---IL 249
            + P  +  DF    + + DA + E+   ++LTSP+NP GS I  +++  + E      L
Sbjct: 131 REYPVSKADDFEQTADTVLDAYDGER--IVYLTSPHNPTGSEIPLDEVEALAERTDEETL 188

Query: 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           VV+DEAY EF+   S +  V++ D++ VLRTFSK  GLAGLR+GY   P    +   R  
Sbjct: 189 VVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVN 248

Query: 310 QPYNVSVAAEVAACAALQNPIYLE 333
            P+  S  A  A  AAL +  ++E
Sbjct: 249 TPFAASELACRAGLAALDDDEHVE 272

Length = 357

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  153 bits (389), Expect = 1e-43
 Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 26/262 (9%)

Query: 95  EDIVKIDANENPYG--PPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSGLE 145
            D + + +NE        P V +A            +      PE R   A     S + 
Sbjct: 1   TDKINLGSNEYLGDSGTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVL 60

Query: 146 ----SDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200
                  ++ G GA   I+ ++  + L+PGD I+   PT+  Y     + G  VV+ P  
Sbjct: 61  KLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYPLY 120

Query: 201 S--DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVL 252
           S  DF L+ + +  A++   E  K +  TSP+NP G++   E+L K+L++     IL+++
Sbjct: 121 SSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLV 180

Query: 253 DEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           DEAY  F        +    + +  NL+V+ +FSK  GLAG RVGY     ++I  L + 
Sbjct: 181 DEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKL 240

Query: 309 KQPYNVSVAAEVAACAALQNPI 330
            +P+  S   + AA AAL +P+
Sbjct: 241 ARPFYSSTHLQAAAAAALSDPL 262

Length = 357

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score =  152 bits (387), Expect = 2e-43
 Identities = 95/284 (33%), Positives = 145/284 (51%), Gaps = 27/284 (9%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
            F+RS L +LK Y P  P       + +      ++D NE PY  PP++++ L  L    
Sbjct: 3   PFLRSDLAQLKAYHPH-PSGDADDAVIQLD----RLDTNEFPYDLPPDLKQKLAWLYQQG 57

Query: 125 I----YPDPESRRLRAALAK--------DSGLESDHILVGCGADELID--LIMRCVLDPG 170
           I    YPD     L+ A+A+         S +   +I VG G+DELI   LI  C+   G
Sbjct: 58  IESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEG 117

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKP---KCIFLTS 226
             +V   PTF+MY   A   G  VV+V R    F +++     A+E+ +    + +F+  
Sbjct: 118 SILV-AEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176

Query: 227 PNNPDGSIINDEDL--LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284
           PN+P G+ +   +L  L+ L   ILVV+DEAY EFS   + +  + +H N ++LRTFSK 
Sbjct: 177 PNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-TTLVGELAQHPNWVILRTFSKA 235

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
             LA  RVGY      +I  L + + PYN+   +++AA  AL++
Sbjct: 236 FRLAAHRVGYAIGHPELIAVLEKVRLPYNLPSFSQLAAQLALEH 279

Length = 374

>gnl|CDD|235440 PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional

 Score =  151 bits (384), Expect = 6e-43
 Identities = 88/276 (31%), Positives = 143/276 (51%), Gaps = 34/276 (12%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPED--IVKIDANENPYGPPPEVREAL-----GQLKFP 123
           +R+L+PY P           G +P+   ++K++ NENPY P P+V EA+       L+  
Sbjct: 9   VRQLEPYVP-----------GEQPKLAKLIKLNTNENPYPPSPKVLEAIRAALGDDLR-- 55

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP +  LR A+A   GL+ + + VG G+DE++        +    ++    T++ Y
Sbjct: 56  -LYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFY 114

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDGSIINDEDLLK 242
              A + G    ++P   DFS++VE      +  +P   I   +PN P G  +   ++ +
Sbjct: 115 PVYAGLYGIPYEEIPLDDDFSIDVE------DYLRPNGGIIFPNPNAPTGIALPLAEIER 168

Query: 243 ILEMPI--LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           IL      +VV+DEAY +F G ES +  + ++ NL+V++TFSK   LAGLRVG+      
Sbjct: 169 ILAANPDSVVVIDEAYVDF-GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPE 227

Query: 301 IIEYLWRAK---QPYNVSVAAEVAACAALQNPIYLE 333
           +IE L R K     Y +   A+  A AA+++  Y E
Sbjct: 228 LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFE 263

Length = 353

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score =  149 bits (377), Expect = 4e-42
 Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 29/283 (10%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDI---------VKIDANENPYGPPPEVREAL 117
           ++  L  L+PY+P           G+ PE +         VK+ +NENP+G  P V + L
Sbjct: 3   VKDQLSSLQPYKP-----------GKSPEQMKEVYGDHSFVKLASNENPFGCSPRVLDEL 51

Query: 118 GQLKFPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
            +    + +YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV  
Sbjct: 52  QKSWLDHALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTA 111

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
             TF  Y   A + G  V +V   +    +++ I+  V+    K +++ +PNNP G+ +N
Sbjct: 112 GATFPQYRHHAIIEGCEVKEVALNNGV-YDLDEISSVVD-NDTKIVWICNPNNPTGTYVN 169

Query: 237 DEDLLKILE---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D  L + +E      L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  
Sbjct: 170 DRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF 229

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           RVGY      +IE L   + P+NVS  A+ AA  A  +  ++E
Sbjct: 230 RVGYAVGHEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIE 272

Length = 366

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score =  143 bits (363), Expect = 5e-40
 Identities = 86/262 (32%), Positives = 133/262 (50%), Gaps = 20/262 (7%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
           R  L  L PYQ        + ++G + +  + I+ANE+P+    E +  L +L     YP
Sbjct: 13  RPELLALTPYQS-------ARRIGGRGD--IWINANESPFNN--EYKLDLARLNR---YP 58

Query: 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
           + +   L  A +  +G+  + IL   GADE I+L++R   +PG D I    PT+ MY   
Sbjct: 59  ECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAIS 118

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A      V  +P  +D+ L ++ I      +  K +F+ +PNNP G++I+  D+ +++EM
Sbjct: 119 AETFNVGVKALPLTADYQLPLDYIEQL---DGAKLVFICNPNNPTGTVIDRADIEQLIEM 175

Query: 247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304
               +VV+DEAY EF    S  + +  + NL+VLRT SK   LAG R G+      +IE 
Sbjct: 176 TPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEI 235

Query: 305 LWRAKQPYNVSVAAEVAACAAL 326
           L R   PY V +     A  AL
Sbjct: 236 LMRVIAPYPVPLPVSEIATQAL 257

Length = 354

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score =  140 bits (355), Expect = 4e-39
 Identities = 80/245 (32%), Positives = 119/245 (48%), Gaps = 23/245 (9%)

Query: 89  QLGRKPEDIVKIDANENPYGPP-PEVR-EALGQLKFPYIYPDPESRRLRAALAKDSGLES 146
           + G  PED + +    NP GPP P +   A  +      YPDPE   LRAA A   GL +
Sbjct: 11  RYGIPPEDWLDLSTGINPLGPPVPPIPLSAWAR------YPDPEYDELRAAAAAYYGLPA 64

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
             +L   GA E I L+ R +L PG  +V   PT++ Y       G  VV++P       +
Sbjct: 65  ASVLPVNGAQEAIYLLPR-LLAPGRVLV-LAPTYSEYARAWRAAGHEVVELP-------D 115

Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTEFSGL 262
           ++ +  A+E      + + +PNNP G +I  E LL +          +V+DEA+ +F+  
Sbjct: 116 LDRLPAALEEAD--LLVVCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD 173

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S      +   L+VLR+ +K  GLAGLR+G+     ++I  L  A  P+ V+  A  A 
Sbjct: 174 ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALIARLREALGPWTVNGPALAAG 233

Query: 323 CAALQ 327
            AAL 
Sbjct: 234 RAALA 238

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score =  140 bits (356), Expect = 6e-39
 Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 22/264 (8%)

Query: 82  PF---EVLSIQLGRKPEDIVKIDANENPYGPPPEV----REALGQLKFPYIYPDPESRRL 134
           PF   E L  Q GR      +I ANE+ +GP P V    REA  ++   + Y DPE+  L
Sbjct: 18  PFVGPETLERQRGRPFR--ARIGANESGFGPSPSVIAAMREAAAEI---WKYGDPENHDL 72

Query: 135 RAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP---PTFTMYEFDAAVNG 191
           R ALA   G+  ++I+VG G D L+ LI+R  ++PGD +V      PTF    +  A  G
Sbjct: 73  RHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFN---YHVAGFG 129

Query: 192 AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--I 248
             +V VP + D   +++ + DA  RE    ++L +P+NP GS     D++  +E +P   
Sbjct: 130 GRLVTVPYRDDRE-DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETT 188

Query: 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           L+VLDEAY E +   +         N+I +RTFSK  GLAG RVGY       I+   + 
Sbjct: 189 LLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKV 248

Query: 309 KQPYNVSVAAEVAACAALQNPIYL 332
           +  + ++  A+ AA AAL++  YL
Sbjct: 249 RNHFGMNRIAQAAALAALKDQAYL 272

Length = 369

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  138 bits (351), Expect = 6e-38
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 37/273 (13%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALA----KDSG 143
           +  ED++ +   E  +  P  + EA  +        Y  P      LR A+A    +  G
Sbjct: 25  KGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHY-TPSAGIPELREAIAEKYKRRYG 83

Query: 144 LE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPR 199
           L+    + I+V  GA E + L    +L+PGD+++  P P +  YE    + G   V VP 
Sbjct: 84  LDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVL-IPDPGYPSYEAAVKLAGGKPVPVPL 142

Query: 200 K---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
               + F  ++E +  A+   K K I L SPNNP G++ + E+L  I+E+     I+++ 
Sbjct: 143 DEEENGFKPDLEDLEAAI-TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201

Query: 253 DEAYTEF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIE 303
           DE Y E         S LE         D  I + +FSK  G+ G R+G+   P   +I 
Sbjct: 202 DEIYEELVYDGAEHPSILELAGAR----DRTITINSFSKTYGMTGWRIGWVVGPPEELIA 257

Query: 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEV 334
            L + K          A+ AA AAL  P   EV
Sbjct: 258 ALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEV 290

Length = 393

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score =  137 bits (347), Expect = 1e-37
 Identities = 88/239 (36%), Positives = 123/239 (51%), Gaps = 13/239 (5%)

Query: 98  VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           V ++ANE+ +  P +   +  +      YPDP+   LR+ALA   G   + +L+G G+DE
Sbjct: 34  VWLNANESAWANPADPDASTRR------YPDPQPPGLRSALAALYGCAPEQLLIGRGSDE 87

Query: 158 LIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
            IDL++R +  PG D ++  PP F MY   A +  A +V+VP       F  +V  I  A
Sbjct: 88  AIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAA 147

Query: 214 VEREKPKCIFLTSPNNPDGSII---NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVK 270
                 K +FL SP+NP GS I     E  L+ L+   LVV+DEAY EFS + S +  + 
Sbjct: 148 ALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLA 207

Query: 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329
           ++DNL VLRT SK   LA  R+G       +I  L R + PY V       A  AL  P
Sbjct: 208 RYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSAP 266

Length = 364

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score =  133 bits (337), Expect = 3e-36
 Identities = 75/259 (28%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALAKDSGL 144
           + G     I+   AN NP G P  +++A    L +L     YPDP+   LR  +A    L
Sbjct: 13  EKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVE---YPDPDYLELRKRIASFEQL 69

Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSD 202
           + +++++G GA ELI  I++ V  P  K++   PTF  YE       A +   ++  +++
Sbjct: 70  DLENVILGNGATELIFNIVK-VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTE 258
           F+ N  ++ +   +E+   +FL +PNNP G +I+ E++ KIL    +  I +++DEA+ +
Sbjct: 128 FAANEIVLEE--IKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMD 185

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNV 314
           F   +   S + +++   NLI++R F+K   + GLR+GYG     ++ E L + ++P+++
Sbjct: 186 FLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWSI 245

Query: 315 SVAAEVAACAALQNPIYLE 333
           +  A++A    L +  Y++
Sbjct: 246 NTFADLAGQTLLDDKEYIK 264

Length = 354

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score =  128 bits (324), Expect = 3e-34
 Identities = 79/247 (31%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDH 148
            E  V ++ANE P GP P  R+A  +      ++     D     LR   A   GL +DH
Sbjct: 42  AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELED----DLRTLFAAQEGLPADH 97

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ++   G+ E ++  +     P   +V   PT+      A   GA V KVP ++D + +V+
Sbjct: 98  VMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVK 157

Query: 209 --LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP---ILVVLDEAYTEFSGL 262
             L AD         I++ +PNNP G++    D+  +L   P   +L+V DEAY  FS  
Sbjct: 158 AMLAADP----NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLV-DEAYIHFSDA 212

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S ++ V +  +LIVLRTFSK  G+AG+R+G  A    ++  L R      + V A  A 
Sbjct: 213 PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFGHN-PLPVPAAAAG 271

Query: 323 CAALQNP 329
            A+L++P
Sbjct: 272 LASLRDP 278

Length = 370

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score =  118 bits (297), Expect = 1e-30
 Identities = 80/244 (32%), Positives = 116/244 (47%), Gaps = 14/244 (5%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQLKFPYI--YPDPESRRLRAALAKDSGLESDHILV 151
           P+ I+   A+ NP GPP  V  A+       +  YPDP+ R LR ALA+   L  + IL 
Sbjct: 21  PDAILDFSASINPLGPPESVIAAIQS-ALSALRHYPDPDYRELRLALAQHHQLPPEWILP 79

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA EL+    R  L     +    P F  Y       GA V ++P   D       + 
Sbjct: 80  GNGAAELLTWAGR-ELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLR 138

Query: 212 DAVER--EKPKC-IFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF---SGLESR 265
                    P   + L +P+NP G + + E +L +LE   LVV+DEA+ +F      +S 
Sbjct: 139 LQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSL 198

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY-LWRAKQPYNVSVAAEVAAC 323
           +  + ++ NLI+LR+ +K   L GLR+GY  A P  +  +  WR   P+ V+  A  AA 
Sbjct: 199 IPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR--DPWPVNGLAAAAAI 256

Query: 324 AALQ 327
           AAL 
Sbjct: 257 AALA 260

Length = 360

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score =  110 bits (276), Expect = 7e-28
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 19/240 (7%)

Query: 96  DIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPE-SRRLRAALAKDSGLESDH 148
           D   +  NENP+  P ++ + +        L+  Y  PD E   ++ + L  D  L  ++
Sbjct: 20  DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDF-LSKNN 78

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           + VG GADE+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +   
Sbjct: 79  VSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI--- 131

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
                V   +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++ 
Sbjct: 132 ---PEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDL 187

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           +KK++NL V+RTFSK   LA  R+GY       I+   R + P+NVS  +++ A  AL +
Sbjct: 188 LKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDH 247

Length = 335

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 97.9 bits (244), Expect = 6e-23
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 30/255 (11%)

Query: 93  KPEDIVKIDANENPYGPPPEVREAL--GQLKFPY-IYPDPES-RRLRAALAKDSGLESDH 148
           K ++++ +  N N  GP  EVREA+     +  Y  YP PE    LR  + KD GL+ D 
Sbjct: 26  KDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDE 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSL 205
            L+  GA E + L+MR  L PGD  V   P + + +  A+  GA V++VP  S   ++ L
Sbjct: 86  ALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL 145

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
             EL+ + ++ E  + I+L  P NP GS   +E++ +  E+       ++ D  Y +F+ 
Sbjct: 146 TPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFA- 203

Query: 262 LESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPY 312
                   ++H        ++ +   +FSK  G+AGLR+G       +IE +        
Sbjct: 204 --------REHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDL 255

Query: 313 NVSVAAEVAACAALQ 327
             +V A+ AA A L+
Sbjct: 256 GTNVIAQEAAIAGLK 270

Length = 380

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 98.0 bits (245), Expect = 6e-23
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 40/226 (17%)

Query: 105 NPYGPPPE-VREALGQL-------KFPYI----YPDPESRRLRAALAK------DSGLES 146
           NP  PPP  V+EAL +L          Y+    YP+     +R A+A+       + L +
Sbjct: 42  NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE-----VREAIAESLNRRFGTPLTA 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSL 205
           DHI++ CGA   +++ ++ +L+PGD+++   P F  Y F    +G  +V VP     F  
Sbjct: 97  DHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQP 156

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----------PILVVLDEA 255
           +++ +  A+   K K + + SPNNP G + ++E L  +  +          PI ++ DE 
Sbjct: 157 DLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEP 215

Query: 256 YTE--FSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFP 298
           Y E  + G E  + ++ K+ DN IV+ +FSK   L G R+GY A  
Sbjct: 216 YREIVYDGAE--VPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN 259

Length = 394

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 94.8 bits (236), Expect = 8e-22
 Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 10/187 (5%)

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNV 207
           I+V  GA E ID+  R +L+PG +++   P +  YE    + GA  V +  R + F L  
Sbjct: 92  IIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTA 151

Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---S 260
           E + +A+  EK +C+ L  P+NP G  ++ E+L  I ++     I V+ DE Y+E     
Sbjct: 152 EALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ 210

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S   + +  +  IV+   SK   + G R+G+   P  + +++ +  Q YNV+ A+ +
Sbjct: 211 PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQ-YNVTCASSI 269

Query: 321 AACAALQ 327
           +  AAL+
Sbjct: 270 SQYAALE 276

Length = 387

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 90.9 bits (226), Expect = 1e-20
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 15/253 (5%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  ++ A+   L     YPD E R L  ALA+   + + 
Sbjct: 14  VLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPAS 73

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSL 205
            IL G G  E I  ++   L P   ++   P F  Y       G  + +   +    + L
Sbjct: 74  WILAGNGETESIFAVVS-GLKPRRAMI-VTPGFAEYRRALQQVGCEIRRYSLREADGWQL 131

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFS 260
             + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F 
Sbjct: 132 T-DAILEALTPD-LDCLFLCTPNNPTG-LLPERQLLQAIAERCKSLNIALILDEAFIDFI 188

Query: 261 GLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYNVSVAA 318
             E+     +  + +L VLR+ +K   + GLR+GY      + +  + R + P++++  A
Sbjct: 189 PDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWSINAFA 248

Query: 319 EVAACAALQNPIY 331
            +A    LQ+  Y
Sbjct: 249 ALAGEVILQDRAY 261

Length = 356

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score = 90.2 bits (225), Expect = 3e-20
 Identities = 75/261 (28%), Positives = 117/261 (44%), Gaps = 45/261 (17%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE I +     +D  +  Y P    PE+REA+                  A L +D+GL+
Sbjct: 46  PEHIKEAAIEALDDGKTKYTPAAGIPELREAI-----------------AAKLKRDNGLD 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD- 202
                ++V  GA + +      +LDPGD+++   P +  Y     + G   V VP   + 
Sbjct: 89  YDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEEN 148

Query: 203 -FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAY- 256
            F L VE +  A+   K K + L SP+NP G++ + E+L  I    +E  I V+ DE Y 
Sbjct: 149 GFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE 207

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AK 309
                  EF+ + S +   +  D  I +  FSK   + G R+GY A P  +I+ + +   
Sbjct: 208 KLVYDGAEFTSIAS-LSP-ELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQS 265

Query: 310 QPY-NVSVAAEVAACAALQNP 329
               N +  A+ AA AAL  P
Sbjct: 266 HSTSNPTSIAQYAAVAALNGP 286

Length = 393

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score = 88.6 bits (220), Expect = 8e-20
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 22/198 (11%)

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----RKSD 202
           D I+V  GA + +D+ MR +++PGD+++   P+F  Y     V  A  V VP     +++
Sbjct: 82  DEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYA--PLVTLAGGVPVPVATTLENE 139

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE 258
           F +    I +A    K K I L SPNNP G+++N  +L +I  +     ++V+ DE Y E
Sbjct: 140 FKVQPAQI-EAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE 198

Query: 259 FSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
            +  E     + ++ +++    I++  FSK   + G R+G+ A P+   E + +  Q Y+
Sbjct: 199 LTYDEAYTSFASIKGMRERT--ILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ-YS 255

Query: 314 VSVA---AEVAACAALQN 328
           +  A   A+ AA  AL+ 
Sbjct: 256 MMCAPTMAQFAALEALRA 273

Length = 378

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score = 87.0 bits (216), Expect = 5e-19
 Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 42/223 (18%)

Query: 106 PYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            YGP    PE+REA+             +  L A        E + I++  GA + +DL+
Sbjct: 127 QYGPTAGLPELREAI-------------AAYLLARRG--ISCEPEQIVITSGAQQALDLL 171

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVERE 217
           +R +LDPGD ++   PT     +  A+      GA V+ VP   +  ++ E + +A+ + 
Sbjct: 172 LRLLLDPGDTVLVEDPT-----YPGALQALEALGARVIPVPV-DEDGIDPEALEEALAQW 225

Query: 218 KPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK 271
           KPK +++T P   NP G  ++ E    +L +     +L++ D+ Y E          +K 
Sbjct: 226 KPKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284

Query: 272 HD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310
            D    +I L +FSK   LA GLR+GY   P  +IE L R KQ
Sbjct: 285 LDAPGRVIYLGSFSK--TLAPGLRLGYVVAPPELIEKLLRLKQ 325

Length = 459

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 34/214 (15%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHIL 150
           G + E ++   A+ NPY PP  + E   + K            L    +K  G   + I+
Sbjct: 4   GIREEGLIDFSASVNPY-PPEWLDEMFERAK-EISGRYTYYEWLEEEFSKLFG---EPIV 58

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           +  G  E + LI    L   D+ V  P  T+  YE  A    A ++K    +D     EL
Sbjct: 59  ITAGITEALYLIGILALR--DRKVIIPRHTYGEYERVARFFAARIIK--GPNDPEKLEEL 114

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTEFSGLESR 265
           +      E+   +F  +PNNPDG   N ++L  +L+       L++LDEA+ +F      
Sbjct: 115 V------ERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDF------ 162

Query: 266 MEWVKKHD-----NLIVLRTFSKRAGLAGLRVGY 294
              VKK +     N+I LRTF+K  GL G+RVGY
Sbjct: 163 ---VKKPESPEGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 77.5 bits (191), Expect = 7e-16
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 37/245 (15%)

Query: 100 IDANENPYGPP---PEVREALGQL---KFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           IDAN++ Y       E+R+A       K+   Y  PE                + ILV  
Sbjct: 56  IDANQSHYTGMAGLLELRQAAADFVKEKYNLDY-APE----------------NEILVTI 98

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNVELIAD 212
           GA E +   +  +L+PGDK++   P +  YE    + GA +V++   ++DF L  E++  
Sbjct: 99  GATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEK 158

Query: 213 AV--EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--- 263
           A+  + +K K + L  P NP G   + E +  + ++     I V+ DE Y+E +      
Sbjct: 159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S  E++   D  I++   SK   + G R+G    P      L ++ Q Y V+ A  +A 
Sbjct: 219 VSIAEYLP--DQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQ-YLVTAATTMAQ 275

Query: 323 CAALQ 327
            AA++
Sbjct: 276 FAAVE 280

Length = 391

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 23/215 (10%)

Query: 134 LRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR ALA+            + I V     + + L  + ++ PGD++V   P +       
Sbjct: 66  LREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAP 125

Query: 188 AVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
            + GA VV VP       ++L+++ +  A+   + + +F+ SPNNP G   + +DL  IL
Sbjct: 126 KILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRAIL 184

Query: 245 EMP----ILVVLDEAYTEFS-GLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
                  + +V DE Y         R    ++  +  D +I + +FSK   + G R+G+ 
Sbjct: 185 AHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEV---AACAALQ 327
             P ++ + L +  + YN S  A+    AA AAL 
Sbjct: 245 VAPPALGQVLEKLIE-YNTSCVAQFVQRAAVAALD 278

Length = 382

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score = 72.2 bits (178), Expect = 4e-14
 Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 134 LRAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           LR A AK        +E D IL+  G  E I   M  + DPGD+I+   P +  Y   A 
Sbjct: 71  LREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFAT 130

Query: 189 VNGAAVVKVPRKSD--FSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             G  +V V  K +  F L + E I   +   K K I +++P NP G +   E+L  + E
Sbjct: 131 SAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEMLAE 189

Query: 246 MP----ILVVLDEAYTEF--SGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +     + ++ DE Y EF   GL+  S +      D +I++ + SKR    G R+G
Sbjct: 190 IAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245

Length = 397

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score = 71.7 bits (176), Expect = 5e-14
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 17/190 (8%)

Query: 128 DPESRR-LRAALAKDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           D E    +    +K+  L  + + I+   GA   + L ++ +LDPGD+++   P FT Y+
Sbjct: 68  DVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK 127

Query: 185 FDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
               + G   + +    +  F +NV+ +   +   K K I L SPNNP G++ + E L +
Sbjct: 128 DQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEE 186

Query: 243 ILEMPI----LVVLDEAYTEFSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           I ++ I     ++ DE Y  FS  E     + +  +   +  I   +FSK   + G R+G
Sbjct: 187 IAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP--ERTITFGSFSKDFAMTGWRIG 244

Query: 294 YGAFPLSIIE 303
           Y   P  IIE
Sbjct: 245 YVIAPDYIIE 254

Length = 384

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 38/250 (15%)

Query: 107 YGPPPEVREALGQLKFPYIYPDPESRRLRAA-------------LAKDSGLE---SDHIL 150
           Y PPPE  EAL          +PE+ + +A              L +D+G+E      I+
Sbjct: 39  YPPPPEAIEALNNF-----LANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIV 93

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELI 210
           V  G++      +  + DPGD+I+   P +  +E    + G   + VP   ++ L  E I
Sbjct: 94  VTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAI 153

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS--GLE- 263
             A+   K + I   SPNNP G +  +  L  +     E  I  + DEAY  F+  G++ 
Sbjct: 154 EQAIT-PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-----PYNVSVA 317
            S        ++ I L + SK  G A  R+GY   P+ ++E + + +      P  VS  
Sbjct: 213 FSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVS-- 270

Query: 318 AEVAACAALQ 327
            + AA  ALQ
Sbjct: 271 -QYAALGALQ 279

Length = 389

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score = 69.9 bits (171), Expect = 2e-13
 Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 20/256 (7%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALAK------DS 142
            K E+++ +   E  +  P  ++EA  +     + +  P+     LR A+A+        
Sbjct: 30  SKMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGV 89

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-- 200
            ++ D+++V  GA E   L    +L+ GD+++   P F  Y  DA +  A  +++P +  
Sbjct: 90  DVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           ++F  + + + + + + + + I +  PNNP G+ ++ E    I ++     I ++ DE Y
Sbjct: 150 NEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPY 208

Query: 257 TEFSGLESRMEWVKKH--DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPY 312
             F    ++   + K+  DN I+  +FSK   + G R+G+   P  +I+ + +  A    
Sbjct: 209 EHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIG 268

Query: 313 NVSVAAEVAACAALQN 328
           NV+   ++A   AL++
Sbjct: 269 NVASFVQIAGIEALRS 284

Length = 391

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 68.6 bits (168), Expect = 6e-13
 Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 45/244 (18%)

Query: 110 PPEVREALGQLK----FPYIYPDPESRRLRAALA-------KDSGLESDHILVGCGADEL 158
           PP +R AL        +P  +  PE   LR A+           GL+   +L   G  EL
Sbjct: 36  PPLIRAALAAAADAPGYPQTWGTPE---LREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92

Query: 159 IDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
           +  +   + L PGD +V     +  YE  A + GA  V                  ++  
Sbjct: 93  VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD-----------PTELDPV 141

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV---- 269
            P  I+L SP NP G +++ ++L  I+    E   +V  DE Y E  G E R   +    
Sbjct: 142 GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLEL-GWEGRPVSILDPR 200

Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------PYNVSVAAEV 320
                H  L+ + + SKR+ LAG R G+ A   +++  L   ++      P  V  AA V
Sbjct: 201 VCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPV-QAAMV 259

Query: 321 AACA 324
           AA  
Sbjct: 260 AALG 263

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 65.9 bits (161), Expect = 5e-12
 Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 44/292 (15%)

Query: 71  LRKLKPYQPILPFEVLSIQL-GRKP---EDIVKIDANENPYGPPPEV-----REALGQL- 120
           L +L+PY    PFE L+  L G  P   +  + +   E P  P P       RE L  L 
Sbjct: 4   LSRLQPY----PFEKLAALLAGVTPPASKPPIALSIGE-PKHPTPAFVLEALRENLHGLS 58

Query: 121 KFPYIYPDPESRRLRAALAK-----DSGLESD-HILVGCGADELIDLIMRCVLDPGDK-I 173
            +P     PE R+  A   +      +G++ + H+L   G  E +    + V++PG   +
Sbjct: 59  TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPL 118

Query: 174 VDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNN 229
           V  P P + +YE  A + GA    +   ++     +   DAV      + + +F+ SP N
Sbjct: 119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDF--DAVPESVWRRCQLLFVCSPGN 176

Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTEF--------SGLESRMEWVKKHD--NL 275
           P G++++ + L K++E+      ++  DE Y+E         +GL      + + D    
Sbjct: 177 PTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236

Query: 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIE--YLWRAKQPYNVSVAAEVAACAA 325
           +V  + SKR+ L GLR G+ A    I++    +R      + +  ++A+ AA
Sbjct: 237 LVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAA 288

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)

Query: 134 LRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           L +A+A    KD+GL  D    + V  G  E I   +  +++PGD+++   P +  YE  
Sbjct: 96  LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT 155

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI-- 243
            ++ GA +  V  R  DF++  + +  A    K + I + +P+NP G +   E+L  I  
Sbjct: 156 LSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIAS 214

Query: 244 --LEMPILVVLDEAYTE--FSGLESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
              E  +L   DE Y +  F G    M  +   ++  + + +  K   L G ++G+   P
Sbjct: 215 LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 274

Query: 299 LSIIEYLWRAKQPYN-----VSVAAEVAACAALQNP 329
             +    W  +Q ++      +   + AA AAL+ P
Sbjct: 275 PHLT---WGVRQAHSFLTFATATPMQWAAVAALRAP 307

Length = 413

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 13/188 (6%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y       G    ++P K  + F  + + I 
Sbjct: 99  GSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIP 158

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + + + K K +F+  PNNP G++   +   +++E      I+V  D AY+E  F G +  
Sbjct: 159 EDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAP 217

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVA 321
           S +E     D  I   + SK   + G R+G       +I  L + K   +  V  A + A
Sbjct: 218 SFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYA 277

Query: 322 ACAALQNP 329
           A AAL  P
Sbjct: 278 AIAALNGP 285

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 24/167 (14%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALAKDS----GLESD---HILVGCGAD 156
           PPE+ EA       G  ++P   P P    LRAA+A       GLE D    +LV  GA 
Sbjct: 39  PPEMLEAAQEAIAGGVNQYP---PGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGAT 95

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
           E I   +  +++PGD+++   P +  Y    A+ GA  V VP   D   F+L+++ +  A
Sbjct: 96  EAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAA 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAY 256
           V   + + + + SP+NP G+++   +L  I E+ +    LV+ DE Y
Sbjct: 156 VT-PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY 201

Length = 387

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 32/207 (15%)

Query: 110 PPEVREALGQLKFPYIYPDPE-SRRLRAALAKD-------SGLESDHILVGCGADELIDL 161
           PP ++EAL        YP    +  LR A+          +GL+   +L   G+ EL+  
Sbjct: 42  PPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101

Query: 162 IMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220
           +   + L PGD +V     +  YE  A + GA VV+       SL        +  ++P 
Sbjct: 102 LPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD-----SL------TELGPQRPA 150

Query: 221 CIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV------- 269
            I+L SP+NP G ++  + L K++    E   +V  DE Y E  G ++    +       
Sbjct: 151 LIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL-GWDAEPVSILDPRVCG 209

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             H  L+ + + SK++ LAG R G+ A
Sbjct: 210 GDHTGLLAVHSLSKQSNLAGYRAGFVA 236

Length = 364

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 59.0 bits (143), Expect = 9e-10
 Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 16/186 (8%)

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213
           D L+ L M    +PGD I+   P +T YE    + GA    +P K  +DF  ++ELI + 
Sbjct: 104 DGLVHLPM-VYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEE 162

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGLE--S 264
           +  +K K + L  P NP  ++   ED  K +     +  I+VV D AY E  F G +  S
Sbjct: 163 I-ADKAKMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPIS 220

Query: 265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA 322
            +      +  + + + SK   LAG R+GY      I+  L + K    Y V +  + AA
Sbjct: 221 FLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAA 280

Query: 323 CAALQN 328
           CAAL+N
Sbjct: 281 CAALRN 286

Length = 399

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 39/218 (17%)

Query: 110 PPEVREALGQ----LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELI 159
           PPE+ EAL +      F Y Y   E   L AA+A          ++ + I+   G    I
Sbjct: 40  PPEIIEALRERVDHGVFGYPYGSDE---LYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96

Query: 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAV 214
            L +R +  PGD +V   P +    F  A+  NG  V++ P   D   + ++ + +  A 
Sbjct: 97  SLAIRALTKPGDGVVIQTPVY--PPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAF 154

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFS 260
             E+ K   L +P+NP G +   E+L KI E+     + V+ DE           +  F+
Sbjct: 155 VDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA 214

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
            L  R       DN I L + SK   LAGL+  Y    
Sbjct: 215 SLSER-----FADNSITLTSASKTFNLAGLKCAYIIIS 247

Length = 388

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 71/230 (30%), Positives = 100/230 (43%), Gaps = 28/230 (12%)

Query: 108 GPPPEVRE----ALGQLKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            PP  +RE     LG L     YP  E  RR RAA+A   G   D +L+  GA E   L+
Sbjct: 35  TPPEWLRERLAARLGDLA---AYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKVPRKSDFSLNVELI---ADAVERE 217
            R  L P    V   P+FT  E +AA+  A   V +V     F L+   +   AD V   
Sbjct: 92  AR--LRPRRAAV-VHPSFT--EPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLV--- 143

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277
                 + +P NP   +   E LL +     ++V+DEA+ +    E           ++V
Sbjct: 144 -----VIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAVPGEPESLAGDDLPGVLV 198

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA--EVAACAA 325
           LR+ +K   LAGLRVGY      ++  L R +  + V       +AAC A
Sbjct: 199 LRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCA 248

Length = 349

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 7/173 (4%)

Query: 133 RLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
            LRAA+A        H ++   G+ E I L++  +L PGD++V   P +      A   G
Sbjct: 55  GLRAAIADRWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVVDPAYHSLSHLAVATG 114

Query: 192 AAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP--- 247
             V   P  +      +L A  A+   + + + +  P+NP G+ +   +L ++LE     
Sbjct: 115 CEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERAARS 174

Query: 248 -ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             +++ D A+ +         +    +D +I   T SK  GL GLRVG+   P
Sbjct: 175 GAVLLWDNAFADLVHDAPPLPDPSALYDRVISFGTLSKAFGLPGLRVGWCVGP 227

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 26/262 (9%)

Query: 92  RKPEDIVKIDANENPYGP-PPEVREALGQL-KFPYIYPDPESR---RLRAALAK------ 140
           R+ EDI+      NP GP PP + E L ++ + P  +    SR   RLR A+++      
Sbjct: 26  RRGEDIIDFSMG-NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRY 84

Query: 141 DSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           D  ++ +   +V  G+ E +  +M   LD GD ++   P++ ++ + A + GA V  VP 
Sbjct: 85  DVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL 144

Query: 200 KSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
                   EL   A+     KPK + L  P+NP    +  E   K++ +     +LVV D
Sbjct: 145 VEGVDFFNEL-ERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHD 203

Query: 254 EAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
            AY +  + G +  S M+     D  +   T SK   +AG R+G+      ++  L R K
Sbjct: 204 LAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIK 263

Query: 310 Q--PYNVSVAAEVAACAALQNP 329
               Y      +VAA AAL+  
Sbjct: 264 SYHDYGTFTPLQVAAIAALEGD 285

Length = 395

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 33/214 (15%)

Query: 106 PYGPPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSG------LESDHILVG 152
            Y PPPE+  AL +         +  +   PE   LR A A          +  + + + 
Sbjct: 40  GYPPPPELLRALAEAAADPAAHLYGPVEGLPE---LREAYAAHYSRLYGAAISPEQVHIT 96

Query: 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL--NVELI 210
            G ++     M  +   GD+++   P +  ++    + G   V +P      L  +    
Sbjct: 97  SGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA 156

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFS------ 260
              +   + + I L +PNNP G +   E L ++ ++     I ++LDE Y +F       
Sbjct: 157 EALI-TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP 215

Query: 261 -GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
             L +  +W    D L+ L +FSK   L G RVG
Sbjct: 216 HDLFADPDW---DDTLVHLYSFSKSYALTGHRVG 246

Length = 386

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 35/225 (15%)

Query: 96  DIVKIDANENPYGPPPEVREALG---QLKFPYIYPDPESRRLRAALAK------DSGLES 146
           D VK D     + PP  ++EA     +    Y  P      LR A+ K         +  
Sbjct: 39  DPVKFD-----FQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP 93

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D + V     E + LI   +LDPGD+I+   P++  Y       G     VP        
Sbjct: 94  DDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGG----VPV---EYRT 146

Query: 207 VEL------IADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDE 254
           +E       I D  ++  EK K I + +PNNP G++   + L +IL    E  + V+ DE
Sbjct: 147 IEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDE 206

Query: 255 AYTE--FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
            Y    + G       + K   +IV+   SK     G R+GY  F
Sbjct: 207 IYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251

Length = 398

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 56.3 bits (136), Expect = 7e-09
 Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 27/265 (10%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRR-LRAALAKD 141
           +L      IV +   E  +  P  +++A       G+ K+  +   P  R+ + A L + 
Sbjct: 27  ELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERR 86

Query: 142 SGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKV 197
           +GL    + I VG GA + I L +   L+ GD+++   P +  Y      N     +V  
Sbjct: 87  NGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC 146

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP-ILVVL 252
           P +  F L  E +  A+   + + + L +P+NP G++ +  +L  +    L  P +LV+ 
Sbjct: 147 PEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLT 205

Query: 253 DEAYTEFSGLESRMEWV-----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
           D+ Y      +     +     +  D ++V    SK   + G R+GY A P  +I  + +
Sbjct: 206 DDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINK 265

Query: 308 -----AKQPYNVSVAAEVAACAALQ 327
                +  P ++S AA  AA    Q
Sbjct: 266 LQSQSSSCPSSISQAAAAAALNGDQ 290

Length = 402

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 56.1 bits (136), Expect = 9e-09
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 39/212 (18%)

Query: 105 NPYGPP----PEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADE 157
           N Y PP      +REA+   K   +Y    D +S                 I V  GA E
Sbjct: 61  NQY-PPMTGVAALREAIAA-KTARLYGRQYDADSE----------------ITVTAGATE 102

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVER 216
            +   +  ++ PGD+++   P++  Y     + G   V+V  +  DF ++ +  A A+  
Sbjct: 103 ALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK 270
            + + I L +P+NP G++ +  D+  + ++     I V+ DE Y    F G  +    V 
Sbjct: 162 PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVL 219

Query: 271 KHDNL----IVLRTFSKRAGLAGLRVGYGAFP 298
           +H  L     V+ +F K   + G +VGY   P
Sbjct: 220 RHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251

Length = 386

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 35/195 (17%)

Query: 132 RRLRAALAKDSG--------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
           ++ R A+A   G         + + +++  GA    + IM C+ DPGD  +   P +  +
Sbjct: 97  KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAF 156

Query: 184 EFDAA-VNGAAVVKVPRKSDFSLNVELIADAVE---------REKPKCIFLTSPNNPDGS 233
           + D     G  ++ VP  S  S N +L  DA +          +K K + LT+P+NP G+
Sbjct: 157 DRDLRWRTGVEIIPVPCSS--SDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 234 IINDEDLLKILEM----PILVVLDEAY--TEFSG--LESRMEWVKKHD------NLI-VL 278
           +++ + L  ++       I +V+DE Y  T F+G    S  E V   D      +LI ++
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 279 RTFSKRAGLAGLRVG 293
            + SK  GL G RVG
Sbjct: 275 YSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 34/242 (14%)

Query: 110 PPEVREALGQLKFPYI--YPDPESRR-LRAALA----KDSGLESD---HILVGCGADELI 159
           PP +R+AL     P +  YP     + LR A++    +  G++ D    +L   G+ E I
Sbjct: 15  PPFIRKALID-AVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAI 73

Query: 160 DLIMRCVLDPGD---KIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAV 214
                  +DP +   +++   P + +YE  A   G     V   ++  F L +E +  ++
Sbjct: 74  FHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSI 133

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF-------SGLE 263
             E  K +++  P+NP G+      L +      E  I++  DE YTE        S LE
Sbjct: 134 LEET-KIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323
             +E      N++   + SKR+G+ G R G+ A    +I +L + +  + V+    V A 
Sbjct: 193 VGIE------NVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAA 246

Query: 324 AA 325
           A 
Sbjct: 247 AK 248

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 21/228 (9%)

Query: 115 EALGQLKFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
           + LGQ K  Y  I   PE +   A+L +   ++ ++IL   GA     L++  +++PGD 
Sbjct: 49  QELGQKKLTYGWIEGSPEFKEAVASLYQ--NVKPENILQTNGATGANFLVLYALVEPGDH 106

Query: 173 IVDCPPTFT-MYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
           ++   PT+  +Y+   ++ GA V   ++  ++ +  +++ +   V R   K I + + NN
Sbjct: 107 VISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLV-RPNTKLICINNANN 164

Query: 230 PDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283
           P G++++   L +I+E+       +L   DE Y       S       ++  I   + SK
Sbjct: 165 PTGALMDRAYLEEIVEIARSVDAYVLS--DEVYRPLDEDGSTPSIADLYEKGISTNSMSK 222

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQN 328
              L G+RVG+ A    +I+ L R  + Y      V  ++ A  AL++
Sbjct: 223 TYSLPGIRVGWIAANEEVIDIL-RKYRDYTMICAGVFDDMLASLALEH 269

Length = 373

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 17/190 (8%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y+      G     +P K  + F  +++ I 
Sbjct: 101 GSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIP 160

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + V + K K +F+  PNNP G++ + E   ++++      I+V  D AY+E  + G +  
Sbjct: 161 EDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPP 219

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV----AAE 319
           S +E     D  I   + SK   + G R+G+      +I  L + K   NV      A +
Sbjct: 220 SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKS--NVDSGVFQAIQ 277

Query: 320 VAACAALQNP 329
            A  AAL  P
Sbjct: 278 EAGIAALNGP 287

Length = 385

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 13/177 (7%)

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCI 222
           C+++PGD I+   P +  Y    A+  A    +P   +++F  +   I + V  EK K +
Sbjct: 113 CLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV-AEKAKLM 171

Query: 223 FLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TEFSGLE--SRMEWVKKHDN 274
           +L  PNNP G++       + +    +  I VV D AY    F G +  S ++     D 
Sbjct: 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDV 231

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVAACAALQNP 329
            I L T SK   +AG RV +     S+IE +   +    VS+  A + AA  AL + 
Sbjct: 232 GIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD 288

Length = 389

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 38/277 (13%)

Query: 78  QPILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------------GQL 120
             I PF V+ +      L R   DI+ +   E  +  P  V EA               L
Sbjct: 8   DAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSAL 67

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   P    + A  A+  GL+     I+V  GA   + L    +++ GD+++   P
Sbjct: 68  GLA-----PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDP 122

Query: 179 TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSI 234
           ++     F AA  G  V+ VP  S  +   +L A  VE    E+ + + L SP+NP G+ 
Sbjct: 123 SYPCNRHFVAAAEGRPVL-VP--SGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTS 179

Query: 235 INDEDLLKILEMPI----LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           I  ++L +I+E         ++DE Y   S   + +  +   D++I + +FSK   + G 
Sbjct: 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGW 239

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSV-AAEVAACAAL 326
           R+G+   P +++    +  Q  N+ + A+ +A  AAL
Sbjct: 240 RLGWLVVPEALVGTFEKLAQ--NLFICASALAQHAAL 274

Length = 388

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 15/126 (11%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L +D +++  G  + I++ +  + +PG  I+   P F +Y+  AA +G  V     +P K
Sbjct: 94  LTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEK 153

Query: 201 S---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
               D    +E +AD    EK   I + +P+NP GS+ + + L KI E+     I ++ D
Sbjct: 154 DWEIDLD-GLESLAD----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIAD 208

Query: 254 EAYTEF 259
           E Y   
Sbjct: 209 EIYGHM 214

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 12/81 (14%)

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEWVKKH 272
            I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   E+   W   +
Sbjct: 182 AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLW---N 238

Query: 273 DNLIVLRTFSKRAGLAGLRVG 293
            N+I+  + SK  GL G+R G
Sbjct: 239 PNIILCMSLSK-LGLPGVRCG 258

Length = 416

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 129 PESRRLRAA-LAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           P++RR  A  L++D    L  D + +  G  + ID+ +  +  PG  I+   P F +YE 
Sbjct: 76  PQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL 135

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLK 242
            AA     V  V    +    V+L  DAVE    +    + + +P NP G++ + + L K
Sbjct: 136 CAAFRHLEVRYVDLLPEKGWEVDL--DAVEALADQNTVALVIINPGNPCGNVYSYQHLKK 193

Query: 243 ILE----MPILVVLDEAY 256
           I E    + ILV+ DE Y
Sbjct: 194 IAETAEKLKILVIADEVY 211

Length = 409

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 129 PESRRLRAALAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           P  R +   L++D    L +D I +  G  + I++IM  +  PG  I+   P + +YE  
Sbjct: 98  PARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEAR 157

Query: 187 AAVNGAAVVK---VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           A  +G  V     +P +  + +++E + +A+  E    + + +PNNP GS+ + E L KI
Sbjct: 158 AVFSGLEVRHFDLLPER-GWEVDLEGV-EALADENTVAMVIINPNNPCGSVYSYEHLAKI 215

Query: 244 LE----MPILVVLDEAY 256
            E    + ILV+ DE Y
Sbjct: 216 AETARKLGILVIADEVY 232

Length = 430

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 47.0 bits (112), Expect = 7e-06
 Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 24/143 (16%)

Query: 178 PTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKC--IFLTSPNNPDGS 233
           P + +YE  A  + A V+ +P  +++DF+ ++       E+E  +   + L SPNNP G 
Sbjct: 117 PFYQIYEGAAIASRAKVLLMPLTKENDFTPSLN------EKELQEVDLVILNSPNNPTGR 170

Query: 234 IINDEDLL----KILEMPILVVLDEAYTEF-------SGLESRMEWVKKHD--NLIVLRT 280
            ++ E+L+      L+   +++ DE Y+E        S LE+ +  V      N++V+ +
Sbjct: 171 TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASIL-VGNESFKNVLVINS 229

Query: 281 FSKRAGLAGLRVGYGAFPLSIIE 303
            SKR+   GLR G+ A   SI++
Sbjct: 230 ISKRSSAPGLRSGFIAGDASILK 252

Length = 374

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FD 186
           LR A+A    +  G++ D   ILV  G    + L    ++DPG   +   P +     F 
Sbjct: 74  LREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL 133

Query: 187 AAVNGAAV-VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             V GAA  V V   S + L   L+ +           + SP NP G++++ ++L  + +
Sbjct: 134 RLVEGAAQLVPVGPDSRYQLTPALV-ERHWNADTVGALVASPANPTGTLLSRDELAALSQ 192

Query: 246 -----MPILVVLDEAYTEFSGLESRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
                   LVV DE Y    GL   ++    ++  D+  VL +FSK  G+ G R+G+   
Sbjct: 193 ALRARGGHLVV-DEIY---HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248

Query: 298 PLSIIEYLWRAKQPYNVSVA--AEVAACAALQ 327
           P + +  L +  Q   +S +  A+ AA A  +
Sbjct: 249 PPAAVPELEKLAQNLYISASTPAQHAALACFE 280

Length = 387

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEWVKKHD 273
           I+L SPNNP G+++  E L ++     E   L++ D AY+ F     L  S  E      
Sbjct: 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGARF 236

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFP 298
             I  R+FSK AG  G+R+G+   P
Sbjct: 237 CAIEFRSFSKTAGFTGVRLGWTVVP 261

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 12/172 (6%)

Query: 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227
           PGD+++   P+F  Y     + GA  V +     DF +N + +A A+   + + I + +P
Sbjct: 113 PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTP 171

Query: 228 NNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLR 279
           +NP  ++ +  DL ++ ++     I+++ DE Y       +R   + +H  L    +++ 
Sbjct: 172 HNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVS 231

Query: 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP 329
           +F K   + G RVGY   P  +++ + +  Q   ++     + A   AL  P
Sbjct: 232 SFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEP 283

Length = 384

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 13/130 (10%)

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV-ELIADAVEREKPKCIFLTSPNNP 230
            I+   P F  Y+  A  +G       R S    N+     + +       IF+ SP+NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGI------RISALPFNLINNNPEILNNYNFDLIFIVSPDNP 134

Query: 231 DGSIINDEDLLKILE----MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKR 284
            G++I+ + LL I E       L+ +DEA+ +F  +  E  +   + + N+I+ R+ +K 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKI 194

Query: 285 AGLAGLRVGY 294
            G+  LR+GY
Sbjct: 195 LGIPSLRIGY 204

Length = 332

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)

Query: 110 PPEVREALGQ-LKFP-YIYPDPESRRLRAA---LAK--DSGLESDHILVGCGADELIDLI 162
           PP V EAL Q L+ P + Y  P      A    LA+     ++ + I+   G    +   
Sbjct: 40  PPAVLEALKQRLEHPVFGYTLPPDSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAA 99

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVERE 217
           +R +  PG+ ++   P +    F +AV  NG  +V  P K D   +  ++E + DA+  E
Sbjct: 100 VRALTAPGEGVIVQTPVY--PPFLSAVKSNGRELVLNPLKLDPGRYRFDLEDLEDAI-TE 156

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-------SRM 266
           K + + L SP+NP G +   E+L ++ E+     ++VV DE + +            S  
Sbjct: 157 KARLLLLCSPHNPVGRVWTREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIPLASLS 216

Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             + +    + L +  K   +AGL + +   P
Sbjct: 217 PEIAE--RTVTLLSPGKTFNIAGLNISFAIIP 246

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEW 268
           E    I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   ++   W
Sbjct: 178 ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW 237

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVG 293
              ++N+I+  + SK  GL G R G
Sbjct: 238 ---NENIILCMSLSK-LGLPGSRCG 258

Length = 417

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 43.7 bits (104), Expect = 8e-05
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEW 268
           EK   I+L  PNNP G+++  E L        E   L++ D AY  F     L  S  E 
Sbjct: 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEI 234

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGY 294
               +  I  R+FSK AG  G R  Y
Sbjct: 235 EGARECAIEFRSFSKTAGFTGTRCAY 260

Length = 409

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 43.9 bits (103), Expect = 8e-05
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L  + I +  G ++ I+++   +  P   I+   P F  Y+  AA +G  V K   +P K
Sbjct: 129 LTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEK 188

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAY 256
            ++ +++E I +A+  E    + + +PNNP G++ + + L K+ E    + I+V+ DE Y
Sbjct: 189 -EWEIDLEGI-EAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY 246

Length = 462

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN---GAAVVKV- 197
             ++ D I  G G  ELI+L M  +LD GD+++   P + ++   A VN   G AV    
Sbjct: 204 PNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--ACVNLAGGTAVHYRC 261

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
             +S++  +++ I   +   + K I + +PNNP G++   E L +I+++     +++  D
Sbjct: 262 DEQSEWYPDIDDIRSKIT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD 320

Query: 254 EAYTE--FSGLESRMEWVKKHDNLIVLRTF---SKRAGLAGLRVGY 294
           E Y      GLE         D   V  TF   SK   +AG R+G+
Sbjct: 321 EIYDRLVMDGLEHTSIASLAPDLFCV--TFSGLSKSHMIAGYRIGW 364

Length = 517

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 50/266 (18%)

Query: 70  HLRKLKPYQPILPFEVLSIQL--GRKPE---DIVKIDANENPYGPPPE-VREA----LGQ 119
            L +L+PY    PFE L   L  G  P      + +   E P  P P  +++A    L  
Sbjct: 4   RLDRLQPY----PFEKLR-ALFAGVTPPADLPPISLSIGE-PKHPTPAFIKDALAANLDG 57

Query: 120 L-KFPYIYPDPESRRLRAALA----KDSGLES----DHILVGCGADELIDLIMRCVLDPG 170
           L  +P     P    LR A+A    +  GL +      +L   G+ E +    + V+D  
Sbjct: 58  LASYPTTAGLPA---LREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRD 114

Query: 171 DK--IVDCP-PTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLT 225
               +V CP P + +YE  A + GA    +     ++F+ + + +   V   + + +F+ 
Sbjct: 115 GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVC 173

Query: 226 SPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF---------SGLESRMEWVKKH 272
           SP NP G+++  +D  K+  +      ++  DE Y+E            LE+  E + + 
Sbjct: 174 SPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAE-LGRD 232

Query: 273 D--NLIVLRTFSKRAGLAGLRVGYGA 296
           D   L+V  + SKR+ + GLR G+ A
Sbjct: 233 DFKRLVVFHSLSKRSNVPGLRSGFVA 258

Length = 396

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 207 VELIADAVEREKPKC--IFLTSPNNPDGSIINDEDLL----KILEMPILVVLDEAYTEFS 260
            EL    VE        + + +PNNP G   +   LL    ++      +V+DEA+ + +
Sbjct: 111 RELDEAEVEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT 170

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S +        LIVLR+F K  GLAG R+G+     +++  L     P+ VS     
Sbjct: 171 PQHS-LAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGPTRW 229

Query: 321 AACAALQN 328
            A AAL +
Sbjct: 230 LAQAALAD 237

Length = 330

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 17/125 (13%)

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKI-VDCP--PTFTMYEFDAAVN---GAAV-V 195
            ++ D I +G G  ELI + M+ +L+ GD++ V  P  P +T     AAV+   G  V  
Sbjct: 92  DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWT-----AAVSLSGGKPVHY 146

Query: 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVV 251
               ++ +  +++ I   +   + K I + +PNNP G++ + E L +I+E+     +++ 
Sbjct: 147 LCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIF 205

Query: 252 LDEAY 256
            DE Y
Sbjct: 206 ADEIY 210

Length = 404

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203
           L  D + +  G     ++I++ +  P   I+   P F   E  A  +   +       + 
Sbjct: 95  LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEK 154

Query: 204 SLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTE 258
              V+L A +A+  E    + + +P NP GS+ + E L KI E    + ILV+ DE Y  
Sbjct: 155 GWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGH 214

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
               S     M        +I L + SKR  + G  +G+
Sbjct: 215 IVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253

Length = 409

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)

Query: 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
           ++R   A+    + D I++  GA    +L+   + DPGD ++   PT     FD  +   
Sbjct: 110 QIRGGKAR---FDPDRIVLTAGATAANELLTFILADPGDALL--VPTPYYPGFDRDLRWR 164

Query: 193 AVVK-VPRKSDFSLNVELIADAVERE---------KPKCIFLTSPNNPDGSIINDEDLLK 242
             VK VP   D S N ++   A+E           + + + +T+P+NP G+ +    L  
Sbjct: 165 TGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED 224

Query: 243 ILEMP----ILVVLDEAYT-------EFSG----LESRMEWVKKHDNLIVLRTFSKRAGL 287
           IL+      I +V DE Y+       EF      +E+R  +    + + ++ + SK  GL
Sbjct: 225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEAR-GYKGVAERVHIVYSLSKDLGL 283

Query: 288 AGLRVG 293
            G RVG
Sbjct: 284 PGFRVG 289

Length = 447

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 38/199 (19%)

Query: 83  FEVLSIQLGRKPEDIVKIDANEN-----PYGP-PPEVREALGQ--LKFPYIYPD----PE 130
           FEV+S QL R+   I       N     P  P P +VR A     L     YP     PE
Sbjct: 16  FEVMS-QLAREHGAI-------NLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPE 67

Query: 131 SRRLRAALAKDS----GLESD---HILVGCGADE-LIDLIMRCVLDPGDKIVDCPPTFTM 182
              LR A+A       GL+ D    ++V  GA E L   ++  +++PGD++V   P +  
Sbjct: 68  ---LRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL-ALVEPGDEVVLFQPLYDA 123

Query: 183 YEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y       G     V  +   + L    +A A    + K + L +P NP G +   E+L 
Sbjct: 124 YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELA 182

Query: 242 KILEMPI----LVVLDEAY 256
            + E       + + DE +
Sbjct: 183 LLAEFCQRHDAVAICDEVW 201

Length = 387

>gnl|CDD|131032 TIGR01977, am_tr_V_EF2568, cysteine desulfurase family protein

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 29/174 (16%)

Query: 107 YGPPPEVREALGQ-LKFPYIYPDPESRRL-----------RAALAKDSGL-ESDHILVGC 153
           Y  P EV EA+    K     P     RL           R  LAK      S H++   
Sbjct: 10  YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTN 69

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---------NGAAVVKVPRKSDFS 204
            A   +++ ++ +L  GD ++      T  E ++            G  +  V   ++  
Sbjct: 70  NATTALNIALKGLLKEGDHVIT-----TPMEHNSVARPLECLKEQIGVEITIVKCDNEGL 124

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYT 257
           ++ E I  A+ +   K I ++  +N  G+I+  E++ ++  E  I  +LD A T
Sbjct: 125 ISPERIKRAI-KTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQT 177

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown [Unknown function, Enzymes of unknown specificity]. Length = 376

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 14/180 (7%)

Query: 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFL 224
           ++PGD ++   P +  +     + GA +  +  K   D+ +++  I + V + + K ++ 
Sbjct: 118 VNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYF 176

Query: 225 TSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLI 276
             P+NP  +    E   +I+       I++V D  Y E  F G +  S +E     D  +
Sbjct: 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGV 236

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLE 333
              T SK   +AG RVG+      II+ L   K    Y +  A + AA  ALQ P  YL+
Sbjct: 237 EFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQ 296

Length = 394

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 27/210 (12%)

Query: 100 IDANE-NPYGP---PPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           +D+ E N Y P    PE REA+                L++ + KD      ++++  G 
Sbjct: 63  VDSQECNGYPPTVGSPEAREAVATYWRNSFVHKES---LKSTIKKD------NVVLCSGV 113

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADA 213
              I + +  + D GD I+   P F  YE    A            + D+  +++ I   
Sbjct: 114 SHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173

Query: 214 VEREKPKCIFLTSPNNPDGSIIND---EDLLKILE-MPILVVLDEAYTE--FSGLESRME 267
           V+ ++ K + +T+P+NP GS  +    ED++++ E + + ++ DE Y    F+G  +   
Sbjct: 174 VD-DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFT 230

Query: 268 WVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            V   D     ++L   +K   + G R+G+
Sbjct: 231 SVADFDTTVPRVILGGTAKNLVVPGWRLGW 260

Length = 412

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 135 RAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           R A+A      D  +E+D +++  G    I++ +  + + G  I+   P F +Y   A  
Sbjct: 79  REAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAES 138

Query: 190 NGAAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL---- 244
            G  V       D S  ++L   +++  EK   + + +P+NP GS+ + + L +IL    
Sbjct: 139 MGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAE 198

Query: 245 EMPILVVLDEAYTEF 259
              + ++ DE Y + 
Sbjct: 199 RQCLPIIADEIYGDM 213

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 25/179 (13%)

Query: 169 PGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKC 221
           PGD I+ CP P++ ++ F   + G  +  VP + D     E    A+ER       KP  
Sbjct: 115 PGDVIL-CPNPSYPIHAFGFIMAGGVIRSVPAEPD-----EEFFPALERAVRHSIPKPIA 168

Query: 222 IFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGL--ESRMEWVKKH 272
           + +  P+NP   +  D D  K +     +  I+++ D AY+E  F G    S ++     
Sbjct: 169 LIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227

Query: 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP 329
           D  +   + SK   +AG R+G+      +I  L R K    Y      +VAA AAL  P
Sbjct: 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGP 286

Length = 405

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 34/149 (22%)

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAV--------ER 216
           +L  GDKI    P FT Y           +++P    + L  V + AD          E 
Sbjct: 186 LLKAGDKIALMTPIFTPY-----------LEIPELPRYDLEVVHINADEENEWQYPDSEL 234

Query: 217 EK---P--KCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVL-DEAYTEFS-GLES 264
           EK   P  K +FL +P+NP    ++DE L KI ++     P L+++ D+ Y  F     S
Sbjct: 235 EKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRS 294

Query: 265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
               +    N I++ +FSK  G  G R+G
Sbjct: 295 LFAVLPY--NTILVYSFSKYFGATGWRLG 321

Length = 527

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 38.3 bits (90), Expect = 0.004
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 16/104 (15%)

Query: 159 IDLIMRCVLDPGDKIV---DC-PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214
           I   +  +L  GD ++   D    T+ ++E      G  V  V    D   +  L A A+
Sbjct: 91  ISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV----DPGDDEALEA-AI 145

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDE 254
           +    K +FL +P+NP   +    D+  I         LVV+D 
Sbjct: 146 KEPNTKLVFLETPSNPLLEVP---DIPAIARLAKAYGALVVVDN 186

Length = 396

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	334
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PLN02368	407	alanine transaminase	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
PRK08068	389	transaminase; Reviewed	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02187	462	rooty/superroot1	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK07324	373	transaminase; Validated	100.0
PRK07337	388	aminotransferase; Validated	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PLN02397	423	aspartate transaminase	100.0
PLN02231	534	alanine transaminase	100.0
PRK08175	395	aminotransferase; Validated	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.97
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.95
PRK07049	427	methionine gamma-lyase; Validated	99.94
PRK10534	333	L-threonine aldolase; Provisional	99.93
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.93
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.93
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.92
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.92
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.92
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.92
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.91
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.91
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.91
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.91
PLN02242	418	methionine gamma-lyase	99.91
PRK06234	400	methionine gamma-lyase; Provisional	99.91
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.9
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.89
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.89
PRK06460	376	hypothetical protein; Provisional	99.89
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.89
PRK02948	381	cysteine desulfurase; Provisional	99.89
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.89
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.89
PRK08045	386	cystathionine gamma-synthase; Provisional	99.89
PLN02721	353	threonine aldolase	99.89
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.89
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.89
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.88
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.88
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.88
PRK13392	410	5-aminolevulinate synthase; Provisional	99.88
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.88
PRK08249	398	cystathionine gamma-synthase; Provisional	99.88
PRK07503	403	methionine gamma-lyase; Provisional	99.88
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.88
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.87
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.87
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.87
PLN02822	481	serine palmitoyltransferase	99.87
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.87
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.87
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.87
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.87
PRK08861	388	cystathionine gamma-synthase; Provisional	99.87
PRK08776	405	cystathionine gamma-synthase; Provisional	99.86
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.86
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.86
PRK06767	386	methionine gamma-lyase; Provisional	99.86
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.86
PRK07050	394	cystathionine beta-lyase; Provisional	99.86
PRK02627	396	acetylornithine aminotransferase; Provisional	99.86
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.85
PRK07179	407	hypothetical protein; Provisional	99.85
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.85
PRK07811	388	cystathionine gamma-synthase; Provisional	99.85
PRK07582	366	cystathionine gamma-lyase; Validated	99.85
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.85
PLN02409	401	serine--glyoxylate aminotransaminase	99.85
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.85
PLN02483	489	serine palmitoyltransferase	99.85
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.84
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.84
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.84
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.84
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.84
PRK08574	385	cystathionine gamma-synthase; Provisional	99.84
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.84
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.83
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.83
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.83
PRK09064	407	5-aminolevulinate synthase; Validated	99.83
PRK09028	394	cystathionine beta-lyase; Provisional	99.82
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.82
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.82
PRK08064	390	cystathionine beta-lyase; Provisional	99.82
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.82
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.82
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.82
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.81
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.81
PRK14012	404	cysteine desulfurase; Provisional	99.81
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.81
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.81
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.81
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.81
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.8
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.8
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.8
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.8
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.8
PRK13393	406	5-aminolevulinate synthase; Provisional	99.8
PLN02651	364	cysteine desulfurase	99.8
PRK07671	377	cystathionine beta-lyase; Provisional	99.79
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.79
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.79
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.79
PRK05939	397	hypothetical protein; Provisional	99.79
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.79
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.79
PRK05968	389	hypothetical protein; Provisional	99.79
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.77
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.77
PRK07505	402	hypothetical protein; Provisional	99.77
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.77
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.76
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.75
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.75
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.75
PRK05967	395	cystathionine beta-lyase; Provisional	99.74
PLN02509	464	cystathionine beta-lyase	99.72
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.72
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.71
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.71
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.71
PRK04260	375	acetylornithine aminotransferase; Provisional	99.71
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.7
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.7
PLN02955	476	8-amino-7-oxononanoate synthase	99.7
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.7
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.69
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.69
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.68
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.68
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.68
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.67
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.67
PRK08114	395	cystathionine beta-lyase; Provisional	99.66
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.64
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.63
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.62
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.61
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.6
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.6
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.6
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.57
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.57
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.56
PLN02624	474	ornithine-delta-aminotransferase	99.56
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.56
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.56
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.55
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.54
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.54
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.53
PRK04311	464	selenocysteine synthase; Provisional	99.5
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.5
PLN00144	382	acetylornithine transaminase	99.5
PRK06434	384	cystathionine gamma-lyase; Validated	99.49
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.48
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.48
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.48
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.46
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.46
PRK02769	380	histidine decarboxylase; Provisional	99.46
PLN02724	805	Molybdenum cofactor sulfurase	99.46
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.44
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.42
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.42
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.42
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.41
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.41
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.41
PLN03032	374	serine decarboxylase; Provisional	99.41
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.41
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.41
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.39
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.38
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.37
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.35
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.31
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.3
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.3
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.3
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.29
PRK03080	378	phosphoserine aminotransferase; Provisional	99.28
PRK15029	755	arginine decarboxylase; Provisional	99.27
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.26
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.25
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.25
PRK13237	460	tyrosine phenol-lyase; Provisional	99.25
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.23
PLN02271	586	serine hydroxymethyltransferase	99.23
PRK06541	460	hypothetical protein; Provisional	99.22
COG4100	416	Cystathionine beta-lyase family protein involved i	99.2
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.2
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.19
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.19
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.17
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.17
PRK13578	720	ornithine decarboxylase; Provisional	99.16
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.15
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.15
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.15
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.14
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.14
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.13
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.13
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.12
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.12
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.11
PRK12403	460	putative aminotransferase; Provisional	99.09
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.08
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.08
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.08
PLN02263	470	serine decarboxylase	99.07
PRK07046	453	aminotransferase; Validated	99.07
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.07
PRK15400	714	lysine decarboxylase CadA; Provisional	99.06
PRK06062	451	hypothetical protein; Provisional	99.05
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.05
PRK06105	460	aminotransferase; Provisional	99.03
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.02
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.01
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.01
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.0
PRK06149	972	hypothetical protein; Provisional	98.99
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	98.98
PRK05367	954	glycine dehydrogenase; Provisional	98.96
PRK07678	451	aminotransferase; Validated	98.94
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	98.94
PRK07482	461	hypothetical protein; Provisional	98.93
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	98.9
PRK06148	1013	hypothetical protein; Provisional	98.89
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	98.89
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	98.89
PRK07036	466	hypothetical protein; Provisional	98.88
PRK05965	459	hypothetical protein; Provisional	98.87
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	98.87
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	98.86
PRK07480	456	putative aminotransferase; Validated	98.86
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	98.85
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	98.85
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	98.85
PRK07481	449	hypothetical protein; Provisional	98.82
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	98.82
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	98.82
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	98.81
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	98.81
PRK06917	447	hypothetical protein; Provisional	98.8
PRK07483	443	hypothetical protein; Provisional	98.8
PRK12566	954	glycine dehydrogenase; Provisional	98.79
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	98.79
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.78
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	98.74
PLN02880	490	tyrosine decarboxylase	98.74
PRK05367	954	glycine dehydrogenase; Provisional	98.73
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	98.71
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	98.7
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.65
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	98.65
PLN02590	539	probable tyrosine decarboxylase	98.64
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.64
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.61
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	98.59
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	98.49
PLN02452	365	phosphoserine transaminase	98.48
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	98.48
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.46
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	98.4
PRK12462	364	phosphoserine aminotransferase; Provisional	98.39
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	98.33
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.21
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.18
PRK08297	443	L-lysine aminotransferase; Provisional	98.15
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.14
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	98.14
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	98.12
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.08
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	97.93
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	97.92
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	97.89
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	97.79
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.73
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	97.69
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	97.51
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	96.63
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	96.63
PRK12566	954	glycine dehydrogenase; Provisional	96.48
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	96.17
KOG0629	510	consensus Glutamate decarboxylase and related prot	96.12
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	95.13
PLN02672	1082	methionine S-methyltransferase	94.22
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	93.41
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	93.07
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	92.63
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	83.96

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.6e-47  Score=363.31  Aligned_cols=285  Identities=81%  Similarity=1.304  Sum_probs=251.1

Q ss_pred             hcCcccccchhhhhccCCCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCC
Q 019868           45 SSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY  124 (334)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~  124 (334)
                      .++++|...    +..++..+++++.+.++.++.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+
T Consensus         6 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~   81 (380)
T PLN03026          6 SSATAMSEV----KQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPY   81 (380)
T ss_pred             cchhhhhhc----cccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhc
Confidence            344454443    2345677788999999999877777888888888777889999999999999999999987643346


Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS  204 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~  204 (334)
                      .||+++..+||+++|+++++++++|++|+|+++++..++..++++||+|++++|+|+.|...++..|++++.++.+++|.
T Consensus        82 ~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~  161 (380)
T PLN03026         82 VYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS  161 (380)
T ss_pred             cCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence            68988889999999999999999999999999999999999999999999999999999999999999999999777789


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (334)
                      +|++++++.+..+++++|++|+||||||.+++.+++++|++..+++|+||+|.+|.+.++....+...+|+++++||||.
T Consensus       162 ~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~  241 (380)
T PLN03026        162 LDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKR  241 (380)
T ss_pred             cCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHh
Confidence            99999999984468999999999999999999999999998778999999999998655444555567899999999999


Q ss_pred             hcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       285 ~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ||++|+|+||+++++++++.+.+.+.+++++.++|.++.++|++.+|++
T Consensus       242 ~glaGlRiGy~~~~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~  290 (380)
T PLN03026        242 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLE  290 (380)
T ss_pred             hcCccccceeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHH
Confidence            9999999999999999999999998889999999999999999877754

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-47  Score=360.08  Aligned_cols=255  Identities=50%  Similarity=0.795  Sum_probs=230.8

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcC-CC
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE  145 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~-~~  145 (334)
                      ++.+.++.+|.++      ++++|.+  ++++|+.|+||+++|+.+.++++. +...++||++...+++++++++++ ++
T Consensus         3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~   74 (356)
T COG0079           3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD   74 (356)
T ss_pred             chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence            4566777777653      2333333  689999999999999999998876 455689999999999999999999 88


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +++|++++|++++|..++++++.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+. +++++|++|
T Consensus        75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~-~~~~lv~i~  152 (356)
T COG0079          75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR-DKTKLVFLC  152 (356)
T ss_pred             cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh-cCCCEEEEe
Confidence            89999999999999999999999999999999999999999999999999999877 9999999999998 489999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      |||||||..++.++++++++.   +.+||+||+|.+|.. ++....+..++|+++++||||.||++|+|+||++++++++
T Consensus       153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i  231 (356)
T COG0079         153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI  231 (356)
T ss_pred             CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence            999999999999999999986   789999999999997 4555555567889999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       303 ~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +.+.+.+.+|++|.++++++.++|++.+|++
T Consensus       232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~  262 (356)
T COG0079         232 AALNKVRPPFNVSSPALAAAIAALRDADYLE  262 (356)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHcccHHHHH
Confidence            9999999999999999999999999988765

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=8.1e-45  Score=346.00  Aligned_cols=262  Identities=35%  Similarity=0.588  Sum_probs=225.5

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCC
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~  146 (334)
                      +..+..+.+|.+......+.+.++  ..++|+|+.|+|++++++.+++++.+ +.....||+.|..+||+++|+++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~   81 (366)
T PRK01533          4 KDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKM   81 (366)
T ss_pred             hhhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCc
Confidence            345566666655444433444433  35789999999999999999998875 333456898899999999999999999


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeC
Q 019868          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS  226 (334)
Q Consensus       147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~  226 (334)
                      ++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++.+ ++.+|+++++++++ ++++++++|+
T Consensus        82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~  159 (366)
T PRK01533         82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICN  159 (366)
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeC
Confidence            999999999999999999999999999999999999999999999999999974 45799999999886 5789999999


Q ss_pred             CCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       227 p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ||||||.+++.+++++|++.   +.++|+||+|.+|.+..   +....+...+++++++||||.||++|+|+||++++++
T Consensus       160 P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~  239 (366)
T PRK01533        160 PNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEE  239 (366)
T ss_pred             CCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHH
Confidence            99999999999999999985   56788999999887543   2334445578999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       301 ~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +++.+.+.+..+++|.++|.++.++|++++|.+
T Consensus       240 ~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~  272 (366)
T PRK01533        240 LIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIE  272 (366)
T ss_pred             HHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHH
Confidence            999999988889999999999999999887764

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-44  Score=345.85  Aligned_cols=234  Identities=31%  Similarity=0.491  Sum_probs=207.9

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~----~--~~~~~-I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|++|++++++|+.+++++.+ +..+  ++||..|.++||+++|+++    +  +++++ |++|+|+++++..++.
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~  107 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL  107 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence            6899999999999999999988776 4433  3347889999999999986    3  56665 9999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++|||+|++++|.|+.|...+..+|++++.++..   ++|.+|++.++++++ +++|+|+||+||||||.++++++++
T Consensus       108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~-~ktk~i~ln~P~NPTGav~~~~~l~  186 (393)
T COG0436         108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT-PKTKAIILNSPNNPTGAVYSKEELK  186 (393)
T ss_pred             HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC-ccceEEEEeCCCCCcCcCCCHHHHH
Confidence            999999999999999999999999999999999953   489999999999998 4999999999999999999999999


Q ss_pred             HHHhC----CCeEEEccCCcCccCCCC-chhhh--c-CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC-
Q 019868          242 KILEM----PILVVLDEAYTEFSGLES-RMEWV--K-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-  311 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~~-~~~~~--~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~-  311 (334)
                      +|++.    +++||+||+|.++.+++. .....  . ..+++|+++||||.|+|+|||+||++++ +++++.+.+++.. 
T Consensus       187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~  266 (393)
T COG0436         187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL  266 (393)
T ss_pred             HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence            99986    999999999999998763 33222  2 2478999999999999999999999998 8899998877766 


Q ss_pred             -CCCcHHHHHHHHHHhcCc
Q 019868          312 -YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       312 -~~~~~~~q~aa~~~L~~~  329 (334)
                       ++++.+.|.++.++|+++
T Consensus       267 ~~~~~~~~Q~aa~~aL~~~  285 (393)
T COG0436         267 TSCAPTPAQYAAIAALNGP  285 (393)
T ss_pred             ccCCCHHHHHHHHHHhcCc
Confidence             589999999999999986

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-43  Score=334.97  Aligned_cols=261  Identities=35%  Similarity=0.544  Sum_probs=227.0

Q ss_pred             hhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCE
Q 019868           71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI  149 (334)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I  149 (334)
                      +....++.++..+..++++++..+.++|+|+.|++++++++.+.+++.+ ......||+.+..+||+++|+++++++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I   85 (357)
T PRK14809          6 LSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQV   85 (357)
T ss_pred             hhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcceE
Confidence            4444555456667778888887778899999999999999999888875 334467888889999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       150 ~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      ++|+|+++++..++++++++||+|++++|+|..|...+...|++++.++.  ++++.+|++++++...  ++|+|++|||
T Consensus        86 ~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--~~k~i~l~~p  163 (357)
T PRK14809         86 WLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD--GERIVYLTSP  163 (357)
T ss_pred             EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--CCcEEEEeCC
Confidence            99999999999999999999999999999999999888889999998885  3467888888877653  5799999999


Q ss_pred             CCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      |||||.+++.+++++|++.   +++||+||+|.+|.+.++........+++++++||||.||++|+|+||+++++++++.
T Consensus       164 ~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~  243 (357)
T PRK14809        164 HNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA  243 (357)
T ss_pred             CCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence            9999999999999999986   7899999999999875544444455689999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          305 LWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       305 l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +.+...+++++.++|.++.++|++++|++
T Consensus       244 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  272 (357)
T PRK14809        244 YARVNTPFAASELACRAGLAALDDDEHVE  272 (357)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHhCCHHHHH
Confidence            99988888999999999999998877654

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-42  Score=327.67  Aligned_cols=249  Identities=34%  Similarity=0.580  Sum_probs=216.8

Q ss_pred             hHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCC
Q 019868           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL  144 (334)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~  144 (334)
                      ...+..+..+.+|.+....         .+...++|+.|+|++++++.+     .....++||+....+|++++++++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~   72 (351)
T PRK01688          7 DLARENVRALTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV   72 (351)
T ss_pred             HHhhHHhhcCCCCCCCCcc---------CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence            4456677777777542211         123469999999999998764     11234779998889999999999999


Q ss_pred             CCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868          145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (334)
Q Consensus       145 ~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~  223 (334)
                      ++++|++|+|+++++.+++++++++| |+|++++|+|..|...++..|++++.++.+++|.+|++++++++  .++++|+
T Consensus        73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~  150 (351)
T PRK01688         73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY  150 (351)
T ss_pred             CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence            99999999999999999999999997 99999999999999999999999999998777999999999987  3789999


Q ss_pred             EeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||||||||.+++.+++++|++.   +.+||+||+|.+|....+....+..++|+++++||||.||++|+|+||++++++
T Consensus       151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~  230 (351)
T PRK01688        151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE  230 (351)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence            99999999999999999999975   689999999999985545555566678999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868          301 IIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       301 ~i~~l~~~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +++.+.+...+|+++.++|.++.++|++.
T Consensus       231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~  259 (351)
T PRK01688        231 VINLLLKVIAPYPLSTPVADIAAQALSPQ  259 (351)
T ss_pred             HHHHHHhccCCCCCCHHHHHHHHHHHhcc
Confidence            99999999989999999999999999874

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4e-42  Score=326.66  Aligned_cols=261  Identities=43%  Similarity=0.711  Sum_probs=225.6

Q ss_pred             HHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCC
Q 019868           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD  147 (334)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~  147 (334)
                      +++..+.++.+.......+++++.+  ++++|+.|++++++++.+.+++.+ +.....||+.|..++|+++|++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~   82 (359)
T PRK03158          5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE   82 (359)
T ss_pred             hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence            4455566665544455556666543  789999999999999999998876 3333456888999999999999999999


Q ss_pred             CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      +|++|+|+++++..++++++++||+|++++|+|+.|...+...|++++.++.+ ++.+|++.+++.++ ++++++++++|
T Consensus        83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p  160 (359)
T PRK03158         83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP  160 (359)
T ss_pred             HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999975 67899999999886 58899999999


Q ss_pred             CCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      |||||.+++.+++.++++.   ++++|+||+|.+|.+++   ......+..+++++++||||.||++|+|+||+++++++
T Consensus       161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~  240 (359)
T PRK03158        161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL  240 (359)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence            9999999999999999975   89999999999987543   22344456789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       302 i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ++.+.+....+++|.++|.++.++|++.+|++
T Consensus       241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  272 (359)
T PRK03158        241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLK  272 (359)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHH
Confidence            99999988889999999999999999877754

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=2.4e-41  Score=322.65  Aligned_cols=236  Identities=31%  Similarity=0.471  Sum_probs=209.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      ++.++|+.|++++++|+.+.+++.+ ......||..+..+||+++++++++++++|++|+|+++++..++..++++||+|
T Consensus        43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~V  122 (370)
T PRK09105         43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGL  122 (370)
T ss_pred             CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEE
Confidence            5679999999999999999998875 333356887778999999999999999999999999999999999999999999


Q ss_pred             EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeE
Q 019868          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (334)
Q Consensus       174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~l  250 (334)
                      ++++|+|+.|...++..|++++.++.++++.+|++++++..  ++++++++||||||||.+++.++++++++.   ++++
T Consensus       123 li~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~l  200 (370)
T PRK09105        123 VTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD--PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVL  200 (370)
T ss_pred             EEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC--CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEE
Confidence            99999999999999999999999997777889999998863  468999999999999999999999999875   7999


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      |+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+.+. ..++++.++|.++.++|++++
T Consensus       201 IvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~~  279 (370)
T PRK09105        201 LVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDPK  279 (370)
T ss_pred             EEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCHH
Confidence            9999998886543334444457899999999999999999999999999999999877 556789999999999999877


Q ss_pred             hhc
Q 019868          331 YLE  333 (334)
Q Consensus       331 ~~~  333 (334)
                      |++
T Consensus       280 ~~~  282 (370)
T PRK09105        280 LVP  282 (370)
T ss_pred             HHH
Confidence            754

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.7e-41  Score=321.90  Aligned_cols=234  Identities=33%  Similarity=0.534  Sum_probs=206.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcC---CCCCCCcChHHHHHHHHHhcC--------CCCCCEEEeCCHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM  163 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~Yp~~g~~~lr~~lA~~~~--------~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++|+.|++++++|+.+.+++.+ +..   ..+||+.|..+||+++|++++        +++++|++|+|+++++..++
T Consensus        29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~  108 (374)
T PRK02610         29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL  108 (374)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence            479999999999999999999875 222   256888899999999999986        78899999999999999888


Q ss_pred             HHhcCCCC-EEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868          164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .+++.+|| +|++++|+|..|...++..|++++.++.++ ++++|++++++++++   .++|+|++|+||||||.+++.+
T Consensus       109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~  188 (374)
T PRK02610        109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA  188 (374)
T ss_pred             HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence            88888886 899999999999999999999999999644 589999999998864   5899999999999999999999


Q ss_pred             HHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcH
Q 019868          239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV  316 (334)
Q Consensus       239 ~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~  316 (334)
                      +++++++.  +++||+||+|.+|.+. .....+...+++++++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus       189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~  267 (374)
T PRK02610        189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS  267 (374)
T ss_pred             HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence            99999876  7999999999998753 22333445678999999999999999999999999999999999887889999


Q ss_pred             HHHHHHHHHhcCch
Q 019868          317 AAEVAACAALQNPI  330 (334)
Q Consensus       317 ~~q~aa~~~L~~~~  330 (334)
                      ++|.++..+|++.+
T Consensus       268 ~~q~a~~~~l~~~~  281 (374)
T PRK02610        268 FSQLAAQLALEHRQ  281 (374)
T ss_pred             HHHHHHHHHhcCHH
Confidence            99999999998853

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=9.6e-41  Score=317.43  Aligned_cols=251  Identities=30%  Similarity=0.434  Sum_probs=213.1

Q ss_pred             CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHH
Q 019868           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL  158 (334)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~  158 (334)
                      +..+...+...+....++|+|+.|+|++++|+.+.+++.+ +.....||+++..+||+++|+++++++++|++|+|++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~   86 (360)
T PRK07392          7 GGNLAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAEL   86 (360)
T ss_pred             CccHHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence            4455555666777777899999999999999999998875 334567887777899999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC-----CCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~-----~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      |.++++++ .+||+|++++|+|..|...++..|++++.++.+.+..     .|++.+++..  .++++++++|||||||.
T Consensus        87 i~~~~~~l-~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~  163 (360)
T PRK07392         87 LTWAGREL-AQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGK  163 (360)
T ss_pred             HHHHHHHh-CCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCC
Confidence            99999975 4789999999999999999999999999999654332     4677776654  36799999999999999


Q ss_pred             CCcHHHHHHHHhCCCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          234 IINDEDLLKILEMPILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       234 ~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      +++++++.++++...++|+||+|.+|.+++.   ....+...+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus       164 ~~~~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~  243 (360)
T PRK07392        164 LWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD  243 (360)
T ss_pred             CcCHHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC
Confidence            9999999999988335777999999986432   2334455689999999999999999999999999999999988887


Q ss_pred             CCCCcHHHHHHHHHHhcCchhhc
Q 019868          311 PYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       311 ~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      .++++.++|.++.++|++.+|.+
T Consensus       244 ~~~~s~~~q~~~~~~l~~~~~~~  266 (360)
T PRK07392        244 PWPVNGLAAAAAIAALADRDFQQ  266 (360)
T ss_pred             CCCCCHHHHHHHHHHhccHHHHH
Confidence            78999999999999999876653

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.9e-41  Score=318.61  Aligned_cols=264  Identities=38%  Similarity=0.674  Sum_probs=224.1

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      ++..+..+.++.+.....+.+.+++  +.++|+|+.|+|++++++.+.+++.+. .....||+....+||+++|++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~   87 (371)
T PRK05166         10 ARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGVP   87 (371)
T ss_pred             hhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCcC
Confidence            4456666777766665555555554  457899999999999999999988763 3346787764359999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.++.++++++|++++++.++ +++++++++
T Consensus        88 ~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~  166 (371)
T PRK05166         88 ADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMFS  166 (371)
T ss_pred             HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEEe
Confidence            9999999999999999999999999999999999999999999999999999987778999999999886 578999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEc-
Q 019868          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-  297 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~-  297 (334)
                      |||||||.+++.+++++|++.   ++++|+||+|.+|.++..   ...... ..+++++++||||.||++|+|+||+++ 
T Consensus       167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~  246 (371)
T PRK05166        167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS  246 (371)
T ss_pred             CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence            999999999999999999986   789999999999985432   222232 346899999999999999999999876 


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       298 ~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ++++++.+.+.+..++++.++|.++.++|.+.+|++
T Consensus       247 ~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  282 (371)
T PRK05166        247 DPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLA  282 (371)
T ss_pred             CHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHH
Confidence            788999988888788999999999999998877654

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.7e-41  Score=318.80  Aligned_cols=237  Identities=35%  Similarity=0.554  Sum_probs=210.2

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl  174 (334)
                      ..++|+.|++++++++.+.+++.+ ......||+++..+||+++|+++++++++|++|+|+++++..++..++++||.|+
T Consensus        33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl  112 (369)
T PRK08153         33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV  112 (369)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence            347999999999999999998875 3333678877789999999999999999999999999999999999999999999


Q ss_pred             EcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEE
Q 019868          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV  251 (334)
Q Consensus       175 ~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lI  251 (334)
                      +++|+|+.|...+...|++++.+|.+++ .+|++++++.+...++++|++++||||||.+++.++++++++.   +++||
T Consensus       113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI  191 (369)
T PRK08153        113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV  191 (369)
T ss_pred             ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence            9999999999888899999999997444 6899999887765689999999999999999999999999975   78999


Q ss_pred             EccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       252 vDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +||+|.+|.+++.........+++++++||||.||++|+|+||+++++++++.+.+.+..++++.++|.++.++|++++|
T Consensus       192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~  271 (369)
T PRK08153        192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY  271 (369)
T ss_pred             EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence            99999999865433333334678999999999999999999999999999999998888899999999999999998777


Q ss_pred             hc
Q 019868          332 LE  333 (334)
Q Consensus       332 ~~  333 (334)
                      ++
T Consensus       272 ~~  273 (369)
T PRK08153        272 LA  273 (369)
T ss_pred             HH
Confidence            64

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-40  Score=313.86  Aligned_cols=234  Identities=42%  Similarity=0.662  Sum_probs=207.6

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      .+.|+|+.|++++++++.+.+++.+ +.  ...+||+.|.++||+++|+++++++++|++|+|+++++..++..+  +||
T Consensus        18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd   95 (337)
T PRK03967         18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK   95 (337)
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence            3679999999999999999888765 32  236788889999999999999999999999999999999988865  799


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEE
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lI  251 (334)
                      +|+++.|+|+.|...++..|++++.++.++++.+|++.+++.+  .+++++++++||||||.+++.+++.++++.++++|
T Consensus        96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii  173 (337)
T PRK03967         96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV  173 (337)
T ss_pred             eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence            9999999999999988999999999998777899999998875  46889999999999999999999999997799999


Q ss_pred             EccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       252 vDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++.++
T Consensus       174 ~De~y~~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  252 (337)
T PRK03967        174 LDEAYAEFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL  252 (337)
T ss_pred             EECchhhhccc-chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence            99999998642 33344445678999999999999999999999999999999999888899999999999999998765


Q ss_pred             hc
Q 019868          332 LE  333 (334)
Q Consensus       332 ~~  333 (334)
                      +.
T Consensus       253 ~~  254 (337)
T PRK03967        253 IE  254 (337)
T ss_pred             HH
Confidence            53

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.8e-40  Score=315.42  Aligned_cols=265  Identities=45%  Similarity=0.748  Sum_probs=232.1

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      +.+++..+.++.+.......+++++.++.++|+|+.|+++++++|.+++++.+ ......||++..+++|+++|++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~   85 (361)
T PRK00950          6 IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGVP   85 (361)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCC
Confidence            45677777888666666667788888777899999999999999999888765 33346788777799999999999999


Q ss_pred             CCCEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868          146 SDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       146 ~~~I~~-t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      +++|++ |+|+++++..+++.++++||+|++++|+|..|...++..|++++.++.+++|.+|++++++.++ .+++++++
T Consensus        86 ~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~  164 (361)
T PRK00950         86 VENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFL  164 (361)
T ss_pred             HHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEEE
Confidence            999999 7999999999999889999999999999999998889999999999977778999999999886 57899999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      ++||||||.+++.+++.++++. ++++|+||+|.+|.. ..........+++++++||||.||++|+|+||+++++++++
T Consensus       165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~  243 (361)
T PRK00950        165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID  243 (361)
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence            9999999999999999999987 999999999998873 23333444567899999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       304 ~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      .+.+...+++++.++|.++..+|++.+|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  273 (361)
T PRK00950        244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIE  273 (361)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHhcCHHHHH
Confidence            999988888999999999999999877653

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.8e-41  Score=318.94  Aligned_cols=235  Identities=33%  Similarity=0.533  Sum_probs=209.8

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC-c----CCCCCCCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Yp~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..++|+.|+|++++++.+++++.+. .    ...+||+.|.++||+++|+++      ++++++|++|+|+++++..+++
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~  106 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ  106 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence            4699999999999999999988752 1    336788888999999999998      5788999999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      +++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++++.++++|++++||||||.+++.+++++|+
T Consensus       107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  186 (368)
T PRK03317        107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL  186 (368)
T ss_pred             HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999987677899999999998756789999999999999999999999999


Q ss_pred             hC-CCeEEEccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHH
Q 019868          245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA  321 (334)
Q Consensus       245 ~~-~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~a  321 (334)
                      +. ++++|+||+|.+|.+.+  ......+..+++++++||||.||++|+|+||+++++++++.+.+.+..+++++++|.+
T Consensus       187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a  266 (368)
T PRK03317        187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA  266 (368)
T ss_pred             HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence            97 89999999999987543  2233334456899999999999999999999999999999998888788999999999


Q ss_pred             HHHHhcCch
Q 019868          322 ACAALQNPI  330 (334)
Q Consensus       322 a~~~L~~~~  330 (334)
                      +.++|++.+
T Consensus       267 ~~~~l~~~~  275 (368)
T PRK03317        267 ARAALRHAD  275 (368)
T ss_pred             HHHHhhCHH
Confidence            999998744

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-40  Score=311.83  Aligned_cols=251  Identities=39%  Similarity=0.649  Sum_probs=217.2

Q ss_pred             HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhc
Q 019868           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS  142 (334)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~  142 (334)
                      +.+..+..+.+|...            .....++|+.|++++++|+.+.+++.+ +.  ...+|++.+..+||+++|+++
T Consensus         5 ~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~   72 (351)
T PRK14807          5 LVREEIKGFKNYEVH------------SIPYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYC   72 (351)
T ss_pred             HHHHHHhhcCCCCCC------------CCCceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHh
Confidence            445666666666211            112359999999999999999999876 32  336787777899999999999


Q ss_pred             CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868          143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (334)
Q Consensus       143 ~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i  222 (334)
                      ++++++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.++.++++.+|++++++++++.++|+|
T Consensus        73 ~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v  152 (351)
T PRK14807         73 SVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLV  152 (351)
T ss_pred             CCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999877789999999999975589999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ++++||||||.+++.+++.++++. +.++|+||+|.+|. +..........+++++++||||.||++|+|+||+++++++
T Consensus       153 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~  231 (351)
T PRK14807        153 FLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENI  231 (351)
T ss_pred             EEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHH
Confidence            999999999999999999999987 78899999998875 3333333445689999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868          302 IEYLWRAKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       302 i~~l~~~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      ++.+.+.+..++++.++|.++.++|++.
T Consensus       232 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~  259 (351)
T PRK14807        232 LKYLNLVKSPYNINSLSQVIALKVLRTG  259 (351)
T ss_pred             HHHHHHccCCCCcCHHHHHHHHHHHhHH
Confidence            9999988888899999999999999874

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-40  Score=314.60  Aligned_cols=237  Identities=41%  Similarity=0.666  Sum_probs=211.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCC
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDP  169 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~  169 (334)
                      +.++|+|+.|+|++++|+++++++.+ +.  ....||+++..+||+++|+++++++ ++|++|+|+++++..++.+++++
T Consensus        25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~  104 (356)
T PRK04870         25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKP  104 (356)
T ss_pred             CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCC
Confidence            35789999999999999999999876 32  2367888888999999999999875 48999999999999999999999


Q ss_pred             CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CC
Q 019868          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (334)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~  248 (334)
                      ||+|++++|+|..|...++..|++++.++.++++++|++.+++.+.+.++++|++++||||||.+++.+++++|++. +.
T Consensus       105 gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~  184 (356)
T PRK04870        105 GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPG  184 (356)
T ss_pred             CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCC
Confidence            99999999999999999999999999999877789999999999875689999999999999999999999999988 88


Q ss_pred             eEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       249 ~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ++|+||+|.+|.+. .....+...+++++++|||| ++++|+|+||+++++++++.+.+.+..++++.++|.++..+|++
T Consensus       185 ~ii~De~y~~~~~~-~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~  262 (356)
T PRK04870        185 LVVVDEAYQPFAGD-SWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH  262 (356)
T ss_pred             EEEEECCchhhcCc-chHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhC
Confidence            99999999988753 22233455678999999999 99999999999999999999988887789999999999999987


Q ss_pred             chhh
Q 019868          329 PIYL  332 (334)
Q Consensus       329 ~~~~  332 (334)
                      .+++
T Consensus       263 ~~~~  266 (356)
T PRK04870        263 VDVL  266 (356)
T ss_pred             HHHH
Confidence            6554

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1e-40  Score=307.36  Aligned_cols=230  Identities=30%  Similarity=0.438  Sum_probs=202.9

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC-cC--CCCC-CCcChHHHHHHHHHhc----C---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 019868          100 IDANENPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD  168 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~-~~--~~~Y-p~~g~~~lr~~lA~~~----~---~~~~~I~~t~G~~~~i~~~~~~l~~  168 (334)
                      |+.|.+++++|+.+.+++++. ..  .++| +..|.++|+++|++.+    |   ...++|++|.|+.++|...+..+++
T Consensus        36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~  115 (420)
T KOG0257|consen   36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN  115 (420)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence            999999999999999998873 22  3666 6778888888888765    3   2456899999999999999999999


Q ss_pred             CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--------CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--------~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                      +||+|++.+|.|..|...+.++|.+++.++..        .+|.+|.++++.++. +++|+|++|+||||||.++++++|
T Consensus       116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL  194 (420)
T KOG0257|consen  116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL  194 (420)
T ss_pred             CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence            99999999999999999999999999999843        578999999999998 799999999999999999999999


Q ss_pred             HHHHhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC-
Q 019868          241 LKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (334)
Q Consensus       241 ~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~-  311 (334)
                      ++|+++    |+++|.||+|..+.+++.    ...+.+++++++.++||||+||++|||+||+++++.++..+..+++. 
T Consensus       195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~  274 (420)
T KOG0257|consen  195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF  274 (420)
T ss_pred             HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence            999986    999999999999987663    23345679999999999999999999999999999999999988887 


Q ss_pred             -CCCcHHHHHHHHHHhcCch
Q 019868          312 -YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       312 -~~~~~~~q~aa~~~L~~~~  330 (334)
                       +.++++.|.|..+++..+.
T Consensus       275 ~~~~~Tp~q~A~a~a~~~~~  294 (420)
T KOG0257|consen  275 VFTCPTPIQEASAAAFALEL  294 (420)
T ss_pred             ccccCcHHHHHHHHHHhhhh
Confidence             5688999999888887644

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=5.4e-40  Score=311.64  Aligned_cols=249  Identities=29%  Similarity=0.536  Sum_probs=214.1

Q ss_pred             CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHH
Q 019868           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL  158 (334)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~  158 (334)
                      +..+..++++.|....++++|+.|++++++|+.+.+++.+ +....+||+++..+||+++|+++++++++|++|+|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~   83 (354)
T PRK06358          4 GGNINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATEL   83 (354)
T ss_pred             CccHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHH
Confidence            3445667788888777789999999999999999998876 344567988888999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      +..+++++ .+ +.|++++|+|+.|...++..|++++.++.+  ++|.+| +++++.+. .+++++++++||||||.+++
T Consensus        84 l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~  159 (354)
T PRK06358         84 IFNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLIS  159 (354)
T ss_pred             HHHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccC
Confidence            99999975 44 689999999999999999999999999864  357889 66666665 57899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHh
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA  308 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~  308 (334)
                      .+++++|++.    ++++|+||+|.+|.+++.   .....+..+++++++||||.||++|+|+||++++ +.+++.+.+.
T Consensus       160 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~  239 (354)
T PRK06358        160 KEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQM  239 (354)
T ss_pred             HHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh
Confidence            9999998864    899999999999986542   2233445689999999999999999999999984 7888999998


Q ss_pred             cCCCCCcHHHHHHHHHHhcCchhh
Q 019868          309 KQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       309 ~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      ...++++.++|.++.++|++.+|+
T Consensus       240 ~~~~~~~~~~q~~~~~~l~~~~~~  263 (354)
T PRK06358        240 REPWSINTFADLAGQTLLDDKEYI  263 (354)
T ss_pred             CCCCcchHHHHHHHHHHhccHHHH
Confidence            888999999999999999887664

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.7e-40  Score=316.84  Aligned_cols=242  Identities=25%  Similarity=0.355  Sum_probs=206.6

Q ss_pred             hCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcC------CCC-CCEEEeCCHHHHH
Q 019868           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELI  159 (334)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~------~~~-~~I~~t~G~~~~i  159 (334)
                      ....+.++++|+.|++++++++.+.+++.+ +.  ..+.|+..|..+||+++|++++      +++ ++|++|+|+++++
T Consensus        27 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al  106 (399)
T PRK07681         27 KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL  106 (399)
T ss_pred             hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence            333456789999999999999999988876 22  2355666789999999999873      677 7999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ..++.+++++||+|++++|+|+.|...++..|++++.++.+  ++|.+|++++++++. .++++|++++||||||.+++.
T Consensus       107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~  185 (399)
T PRK07681        107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHE  185 (399)
T ss_pred             HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCH
Confidence            99999999999999999999999999999999999999964  347789999999886 589999999999999999999


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCCC-chh---hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLES-RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++++|++.    +++||+||+|.+|.+++. ...   .....+++++++||||.||++|+|+||+++++++++.+.+.+
T Consensus       186 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~  265 (399)
T PRK07681        186 DFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFK  265 (399)
T ss_pred             HHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHH
Confidence            999988764    899999999999986432 112   112347899999999999999999999999999999998876


Q ss_pred             C--CCCCcHHHHHHHHHHhcCc-hhh
Q 019868          310 Q--PYNVSVAAEVAACAALQNP-IYL  332 (334)
Q Consensus       310 ~--~~~~~~~~q~aa~~~L~~~-~~~  332 (334)
                      .  .++++.+.|.++.++|++. +|+
T Consensus       266 ~~~~~~~s~~~q~~~~~~l~~~~~~~  291 (399)
T PRK07681        266 SNTDYGVFLPIQKAACAALRNGAAFC  291 (399)
T ss_pred             hhcccCCCHHHHHHHHHHHhCcHHHH
Confidence            5  4789999999999999884 454

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=5.3e-40  Score=316.15  Aligned_cols=240  Identities=23%  Similarity=0.346  Sum_probs=205.4

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C---CCCC-CEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~---~~~~-~I~~t~G~~~~i~~~  162 (334)
                      .+.++|+|+.|++++++++.+.+++.+ +.....|++. |..+||+++|+++    |   ++++ +|++|+|+++++..+
T Consensus        27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~  106 (396)
T PRK09147         27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF  106 (396)
T ss_pred             cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence            467899999999999999999998876 3444779654 7899999999976    5   5664 899999999999999


Q ss_pred             HHHhcCC---CCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +++++++   ||+|++++|+|..|...++..|++++.+|.+  ++|.+|++++++.+. +++|++++||||||||.+++.
T Consensus       107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~  185 (396)
T PRK09147        107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL  185 (396)
T ss_pred             HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence            9999999   8999999999999999999999999999964  457899999998875 589999999999999999999


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCCC--chhh------h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~------~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +++++|++.    +++||+||+|.++.+++.  ....      .  +..+|+++++||||.|+++|+|+||+++++++++
T Consensus       186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~  265 (396)
T PRK09147        186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK  265 (396)
T ss_pred             HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence            999999874    899999999999876432  1111      1  1357999999999999999999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      .+.+.+..  ++++.+.|.++.+++.+.+|++
T Consensus       266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~  297 (396)
T PRK09147        266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVR  297 (396)
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHhcchhHHH
Confidence            88877653  6789999999999887766553

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.6e-40  Score=312.11  Aligned_cols=247  Identities=34%  Similarity=0.539  Sum_probs=210.5

Q ss_pred             HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      ..+..+..+.++.+..         +..+.+.++|+.|+|++++++.+     ......+||+.+..+||+++|++++++
T Consensus        11 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~   76 (354)
T PRK04635         11 LARPELLALTPYQSAR---------RIGGRGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVA   76 (354)
T ss_pred             HhhHHhhcCCCCCCCC---------CcCCCCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcC
Confidence            3455566666664321         11234569999999999998754     111236799888899999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      +++|++|+|++++|..++.+++++| |+|++++|+|..|...++..|++++.+|.++++.+|++.++. +  .++|+|++
T Consensus        77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i  153 (354)
T PRK04635         77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFI  153 (354)
T ss_pred             HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEE
Confidence            9999999999999999999999998 999999999999999999999999999987678999998873 3  47999999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          225 TSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      ||||||||.+++.+++++|++.  +++||+||+|.+|....+........+++++++||||.||++|+|+||++++++++
T Consensus       154 ~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~  233 (354)
T PRK04635        154 CNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI  233 (354)
T ss_pred             eCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH
Confidence            9999999999999999999986  78999999999987544444445567899999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868          303 EYLWRAKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       303 ~~l~~~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +.+.+...+++++.+.|.++.++|++.
T Consensus       234 ~~l~~~~~~~~~~~~~~~~a~~~l~~~  260 (354)
T PRK04635        234 EILMRVIAPYPVPLPVSEIATQALSEA  260 (354)
T ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence            999888878999999999999999764

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1e-39  Score=311.00  Aligned_cols=263  Identities=39%  Similarity=0.655  Sum_probs=226.8

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      .++++.++.++.+...+..++++.  .+.++++|+.|++++++++.+++++.+ ......||+.+..+||+++|++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~   83 (367)
T PRK02731          6 PNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVD   83 (367)
T ss_pred             chhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcC
Confidence            356676777776555656566655  567799999999999999999888876 33346788776789999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.++. +++.+|++.+++.++ +++++|+++
T Consensus        84 ~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~  161 (367)
T PRK02731         84 PERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIA  161 (367)
T ss_pred             HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEe
Confidence            999999999999999999999999999999999999999888889999999987 567899999999997 689999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +||||||.+++.++++++++.   ++++|+||+|.++.+.+   ......+..+++++++||||.||++|+|+||+++++
T Consensus       162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~  241 (367)
T PRK02731        162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP  241 (367)
T ss_pred             CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence            999999999999999999986   79999999999887532   222334456789999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       300 ~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ++++.+.+...+++.+.++|.++.++|++.++++
T Consensus       242 ~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~  275 (367)
T PRK02731        242 EIIDALNRVRQPFNVNSLALAAAVAALDDDAFVE  275 (367)
T ss_pred             HHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHH
Confidence            9999999888888999999999999999876643

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.2e-40  Score=311.30  Aligned_cols=233  Identities=34%  Similarity=0.568  Sum_probs=205.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~  172 (334)
                      +++|+|+.|++++++++.+.+++.+ +. ....||+.+..+||+++|+++++++++|++|+|++++|.+++++++++||+
T Consensus        24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~  103 (353)
T PRK05387         24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP  103 (353)
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence            5689999999999999999999876 22 246788878899999999999999999999999999999999999999999


Q ss_pred             EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeE
Q 019868          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV  250 (334)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~l  250 (334)
                      |++++|+|+.|...++..|++++.++.++++.+|++++++     +.++++++|||||||.+++.+++++|++.  ++++
T Consensus       104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l  178 (353)
T PRK05387        104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV  178 (353)
T ss_pred             EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence            9999999999999999999999999987778999999863     35789999999999999999999999986  8999


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhc
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQ  327 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~  327 (334)
                      |+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+....   ++++.++|.++.++|+
T Consensus       179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~  257 (353)
T PRK05387        179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE  257 (353)
T ss_pred             EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence            999999887532 333344456889999999999999999999999999999999887643   5789999999999998


Q ss_pred             Cchhhc
Q 019868          328 NPIYLE  333 (334)
Q Consensus       328 ~~~~~~  333 (334)
                      +.+|++
T Consensus       258 ~~~~~~  263 (353)
T PRK05387        258 DEAYFE  263 (353)
T ss_pred             CHHHHH
Confidence            876653

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=8.1e-40  Score=310.66  Aligned_cols=251  Identities=27%  Similarity=0.433  Sum_probs=212.4

Q ss_pred             CCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHH
Q 019868           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE  157 (334)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~  157 (334)
                      ++......+++++.++.++++|+.|+|++++|+.+++++.+ +.....||+.+..+||+++|+++++++++|++|+|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~   83 (356)
T PRK08056          4 HGGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETE   83 (356)
T ss_pred             CCccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHH
Confidence            45566667788888888899999999999999999998875 33335788878899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++..+++.+ .+|+ +++++|+|..|...++..|++++.++.+  +++.+| +++++.+. +++|+|++++||||||.++
T Consensus        84 ~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~  159 (356)
T PRK08056         84 SIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP  159 (356)
T ss_pred             HHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCC
Confidence            999999976 6776 6778999999999999999999999864  345666 45566665 6899999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK  309 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~  309 (334)
                      +.+++++|++.    ++++|+||+|.+|.+.. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+..
T Consensus       160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~  239 (356)
T PRK08056        160 ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ  239 (356)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC
Confidence            98888887764    89999999999988543 2233344567999999999999999999999998 568888898887


Q ss_pred             CCCCCcHHHHHHHHHHhcCchhhc
Q 019868          310 QPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ..++++.++|.++..+|++++|.+
T Consensus       240 ~~~~~~~~~~~~a~~~l~~~~~~~  263 (356)
T PRK08056        240 MPWSINAFAALAGEVILQDRAYQQ  263 (356)
T ss_pred             CCCchhHHHHHHHHHHhCCHHHHH
Confidence            788999999999999998877653

>PLN02368 alanine transaminase

Probab=100.00  E-value=3.7e-40  Score=317.21  Aligned_cols=262  Identities=18%  Similarity=0.292  Sum_probs=214.1

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCC--------C----------------------CCCHHHHHH
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREA  116 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~a  116 (334)
                      +++++..+.++ ....+...+.+....+.++|+|++|+++        |                      .+++.+.++
T Consensus        11 ~~~~~~~~~~~-~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a   89 (407)
T PLN02368         11 LNENVKKCQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA   89 (407)
T ss_pred             cCHHHHhhhhh-cCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence            45666666666 3455666777776677789999999986        3                      155556666


Q ss_pred             HhcC---c-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHH
Q 019868          117 LGQL---K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYE  184 (334)
Q Consensus       117 l~~~---~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~  184 (334)
                      +..+   . ....|++ .|.++||+++|+++    |  +++++|++|+|+++++..++.+++ ++||+|++++|+|+.|.
T Consensus        90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~  169 (407)
T PLN02368         90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS  169 (407)
T ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence            5543   1 2357855 58899999999987    5  578999999999999999999887 79999999999999999


Q ss_pred             HHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEc
Q 019868          185 FDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLD  253 (334)
Q Consensus       185 ~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvD  253 (334)
                      ..++..|++++.++.+  ++|++|++.+++.+++     .++|+++++|||||||.+++.+++++|++.    +++||+|
T Consensus       170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D  249 (407)
T PLN02368        170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD  249 (407)
T ss_pred             HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence            9999999999999854  4589999999998862     168999999999999999999999999875    8999999


Q ss_pred             cCCcCccCCC--Cchh---hh---c----CCCcEEEEcCCchhh-cccccchheeE---cCHHHHHHHHHhc-CCCCCcH
Q 019868          254 EAYTEFSGLE--SRME---WV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSV  316 (334)
Q Consensus       254 eay~~~~~~~--~~~~---~~---~----~~~~~i~i~S~SK~~-gl~G~R~G~l~---~~~~~i~~l~~~~-~~~~~~~  316 (334)
                      |+|.++.+++  ....   .+   .    ..+++++++||||.| |++|||+||++   +++++++.+.+.. ..++++.
T Consensus       250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~  329 (407)
T PLN02368        250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNV  329 (407)
T ss_pred             ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCc
Confidence            9999998643  1111   11   1    245899999999998 89999999999   4889999998875 3478999


Q ss_pred             HHHHHHHHHhcCc
Q 019868          317 AAEVAACAALQNP  329 (334)
Q Consensus       317 ~~q~aa~~~L~~~  329 (334)
                      ++|.++.++|+++
T Consensus       330 ~~Q~aa~~~l~~~  342 (407)
T PLN02368        330 SGQIFMGLMVNPP  342 (407)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999999864

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-39  Score=315.08  Aligned_cols=240  Identities=20%  Similarity=0.321  Sum_probs=205.5

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhc----C---CCCC-CEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~----~---~~~~-~I~~t~G~~~~i~~  161 (334)
                      ++.++++|+.|++++++++.+.+++.+ +.  ...+||+.|..+||+++|+++    |   ++++ +|++|+|++++|..
T Consensus        42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~  121 (410)
T PRK06290         42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM  121 (410)
T ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence            456799999999999999998888765 22  235688789999999999996    4   5676 79999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++.+++++||.|+++.|+|+.|...++..|++++.++.+  .++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus       122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~  200 (410)
T PRK06290        122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF  200 (410)
T ss_pred             HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence            999999999999999999999999999999999999964  357789999999886 58999999999999999999999


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~  312 (334)
                      +++|++.    +++||+||+|.++.+++..   .......+++++++||||.||++|+|+||+++++++++.+.+.+..+
T Consensus       201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~  280 (410)
T PRK06290        201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN  280 (410)
T ss_pred             HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence            9988764    8999999999998764321   12222346789999999999999999999999999999998887764


Q ss_pred             --CCcHHHHHHHHHHhcCchhhc
Q 019868          313 --NVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       313 --~~~~~~q~aa~~~L~~~~~~~  333 (334)
                        +.+.++|.++..+|++++|++
T Consensus       281 ~~~~~~~~q~aa~~~l~~~~~~~  303 (410)
T PRK06290        281 DSGQFIAIQKAGIYALDHPEITE  303 (410)
T ss_pred             ccCCcHHHHHHHHHHhhCcHHHH
Confidence              456789999999999877654

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-39  Score=309.73  Aligned_cols=229  Identities=38%  Similarity=0.561  Sum_probs=202.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIV  174 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl  174 (334)
                      ..++++.|++++++++..      .....+||+++..+||+++|+++++++++|++|+|+++++.+++.+++++| |+|+
T Consensus        32 ~~~~~~~ne~~~~~~~~~------~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vl  105 (364)
T PRK04781         32 GDVWLNANESAWANPADP------DASTRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVL  105 (364)
T ss_pred             CCEEeeCCCCCCCCChhh------cchhccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEE
Confidence            468999999999987642      112367888888999999999999999999999999999999999999998 7999


Q ss_pred             EcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CC
Q 019868          175 DCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PI  248 (334)
Q Consensus       175 ~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~  248 (334)
                      +++|+|..|...++..|++++.++.+   +++.+|++++++.+...++++|++++||||||.+++.++++++++.   ++
T Consensus       106 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~  185 (364)
T PRK04781        106 VTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKA  185 (364)
T ss_pred             EcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc
Confidence            99999999999889999999999852   3467899998766544689999999999999999999999999985   78


Q ss_pred             eEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       249 ~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +||+||+|.+|.+.++.....+..+|+++++||||.||++|+|+||+++++++++.+.+.+.+++++.++|.++.++|++
T Consensus       186 ~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~  265 (364)
T PRK04781        186 LVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSA  265 (364)
T ss_pred             EEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhc
Confidence            99999999999865545555566789999999999999999999999999999999999999999999999999999988


Q ss_pred             ch
Q 019868          329 PI  330 (334)
Q Consensus       329 ~~  330 (334)
                      ++
T Consensus       266 ~~  267 (364)
T PRK04781        266 PA  267 (364)
T ss_pred             cc
Confidence            63

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=1.8e-39  Score=322.39  Aligned_cols=261  Identities=22%  Similarity=0.297  Sum_probs=211.3

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHh
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD  141 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~  141 (334)
                      .++++.++.++ ....+...+++....+.++|+|+.|++   ++++|+++.+++.+ +.....|++. |..+||++||++
T Consensus       119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~  197 (517)
T PRK13355        119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY  197 (517)
T ss_pred             hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence            57777776665 233344556666666778999999877   46678888888765 4444679655 899999999999


Q ss_pred             c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHh
Q 019868          142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA  213 (334)
Q Consensus       142 ~------~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~  213 (334)
                      +      ++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++.+  .+|.+|+++++++
T Consensus       198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~  277 (517)
T PRK13355        198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK  277 (517)
T ss_pred             HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence            8      6889999999999999999999999999999999999999999999999999999853  4689999999999


Q ss_pred             cccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-chh--hhcCCCcEEEEcCCchhhc
Q 019868          214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-RME--WVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       214 l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~~~~~~i~i~S~SK~~g  286 (334)
                      ++ +++|+|+++|||||||.+++.+++++|++.    +++||+||+|.+|.+++. ...  .......+++++||||.|+
T Consensus       278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~  356 (517)
T PRK13355        278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM  356 (517)
T ss_pred             cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence            86 689999999999999999999999888764    899999999999986532 222  2222234677899999999


Q ss_pred             ccccchheeEcC--HH----HHHHHHHhcCC-CCCcHHHHHHHHHHhcCc
Q 019868          287 LAGLRVGYGAFP--LS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       287 l~G~R~G~l~~~--~~----~i~~l~~~~~~-~~~~~~~q~aa~~~L~~~  329 (334)
                      ++|||+||++++  ++    +++.+...... ++++.++|.++.++|++.
T Consensus       357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~  406 (517)
T PRK13355        357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGH  406 (517)
T ss_pred             CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCC
Confidence            999999999953  44    44445444433 678999999999999763

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-39  Score=306.26  Aligned_cols=229  Identities=34%  Similarity=0.513  Sum_probs=199.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcC---CCCCCEEEeCCHHHHHHHHHHHh
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~---~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      .+.++|+|+.|+|++++|+.+++++.+ +.  ....||+++..+||+++|++++   +++++|++|+|++++|..++..+
T Consensus        17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~   96 (335)
T PRK14808         17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF   96 (335)
T ss_pred             CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh
Confidence            346789999999999999999998865 32  2245887789999999999998   88999999999999999999976


Q ss_pred             cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                          |.|++++|+|+.|...++..|++++.+|.++++.++...    +  .++++++++|||||||.+++.+++++|++.
T Consensus        97 ----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~  166 (335)
T PRK14808         97 ----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKT  166 (335)
T ss_pred             ----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhc
Confidence                679999999999999999999999999977666665332    2  246899999999999999999999999987


Q ss_pred             CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHh
Q 019868          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL  326 (334)
Q Consensus       247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L  326 (334)
                      +++||+||+|.+|.. .+....+...+++++++||||.||++|+|+||+++++++++.+.+.+..++++.++|.++.++|
T Consensus       167 ~~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l  245 (335)
T PRK14808        167 GAFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVAL  245 (335)
T ss_pred             CCEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence            999999999999863 2333444566899999999999999999999999999999999988878999999999999999


Q ss_pred             cCchhh
Q 019868          327 QNPIYL  332 (334)
Q Consensus       327 ~~~~~~  332 (334)
                      ++.++.
T Consensus       246 ~~~~~~  251 (335)
T PRK14808        246 DHREIF  251 (335)
T ss_pred             hCHHHH
Confidence            886554

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-39  Score=311.03  Aligned_cols=259  Identities=21%  Similarity=0.305  Sum_probs=212.8

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc--
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS--  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~--  142 (334)
                      ++++.++.++. ...+...+++....+.++++|+.|++++++|+.+.+++.+ +. ....| +..|.+++|+++|+++  
T Consensus         6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~   84 (387)
T PRK08960          6 SRRSRDIEPFH-VMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQ   84 (387)
T ss_pred             hhHHHhCCchH-HHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHH
Confidence            34444444442 2222223333333456789999999999999999998876 32 22457 6678999999999997  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc
Q 019868          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER  216 (334)
Q Consensus       143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~  216 (334)
                          ++++++|++|+|+++++..++..++++||+|++++|+|+.+...+...|++++.++.+  .+|.+|++.+++.++ 
T Consensus        85 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-  163 (387)
T PRK08960         85 RYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-  163 (387)
T ss_pred             HhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-
Confidence                3788999999999999999999999999999999999999999999999999998854  357899999999887 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccch
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV  292 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~  292 (334)
                      ++++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++.........+++++++||||.||++|+|+
T Consensus       164 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRi  243 (387)
T PRK08960        164 ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRL  243 (387)
T ss_pred             ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEE
Confidence            578899999999999999999999998764    8999999999998765433333444678999999999999999999


Q ss_pred             heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          293 GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       293 G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ||+++++++++.+.+....  ++++.+.|.++.++|++
T Consensus       244 G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  281 (387)
T PRK08960        244 GWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP  281 (387)
T ss_pred             EEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence            9999999999999887764  46799999999999975

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=1.9e-39  Score=311.55  Aligned_cols=244  Identities=20%  Similarity=0.232  Sum_probs=199.7

Q ss_pred             HhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCC-CcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHH
Q 019868           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADE  157 (334)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp-~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~  157 (334)
                      .....+.++|+|+.|++++++++.+.+++.+ +.  ....|+ ..|.++||+++|+++    |  ++++ +|++|+|+++
T Consensus        24 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~  103 (388)
T PRK07366         24 QARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE  103 (388)
T ss_pred             HHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence            3344566789999999999999999988875 22  235685 468999999999987    3  6787 6999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++..++.+++++||+|++++|+|+.|...++..|++++.++.+  .++.+|++++++.+. .++|+|++|+||||||.++
T Consensus       104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~  182 (388)
T PRK07366        104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIA  182 (388)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccC
Confidence            9999999999999999999999999999999999999999964  347789999988775 5789999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhh--h-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEW--V-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~--~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      +.+++++|++.    +++||+||+|.+|.+++.  ....  . ...+++++++||||.||++|+|+||+++++++++.+.
T Consensus       183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~  262 (388)
T PRK07366        183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALR  262 (388)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHH
Confidence            99999998764    899999999999986432  1111  2 1235789999999999999999999999999999999


Q ss_pred             HhcCCCCC--cHHHHHHHHHHhc-Cchhhc
Q 019868          307 RAKQPYNV--SVAAEVAACAALQ-NPIYLE  333 (334)
Q Consensus       307 ~~~~~~~~--~~~~q~aa~~~L~-~~~~~~  333 (334)
                      +.+..++.  ....+.++.++|. +++|++
T Consensus       263 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~  292 (388)
T PRK07366        263 QVKAVVDFNQYRGILNGAIAALTGPQATVQ  292 (388)
T ss_pred             HHHhhcccCCCHHHHHHHHHHHhCcHHHHH
Confidence            88876543  2334455556654 455543

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.3e-39  Score=305.59  Aligned_cols=238  Identities=22%  Similarity=0.268  Sum_probs=197.5

Q ss_pred             CCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCH
Q 019868           77 YQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGA  155 (334)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~  155 (334)
                      ..++.....++..+|.++.++++|+.|+||+++|+.....    ....+||++. .+||+++|+++|+. +++|++|+|+
T Consensus         6 ~~hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs   80 (339)
T PRK06959          6 IAHGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGS   80 (339)
T ss_pred             cCCCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCH
Confidence            3456667777788887777899999999999887322211    1125599876 99999999999996 5899999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       156 ~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      +++|..+.. ++++|| |++++|+|+.|...++..|++++.++.++      +.    +. ...+++++||||||||.++
T Consensus        81 ~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~  147 (339)
T PRK06959         81 QAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERL  147 (339)
T ss_pred             HHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCC
Confidence            999997765 578877 88899999999999999999999987532      22    22 2467999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +.++++++++.    +.++|+||+|.+|....+..... ..+++++++||||.||++|+|+||+++++++++.+.+.+.+
T Consensus       148 s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~  226 (339)
T PRK06959        148 PAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGA  226 (339)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCC
Confidence            99999998752    88999999999987543333222 45789999999999999999999999999999999999989


Q ss_pred             CCCcHHHHHHHHHHhcCchhhc
Q 019868          312 YNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      |+++.++|.++.++|++++|.+
T Consensus       227 ~~vs~~~q~a~~~~L~~~~~~~  248 (339)
T PRK06959        227 WTVSGPARHAVRAAFADAAWQA  248 (339)
T ss_pred             CCCcHHHHHHHHHHhCcHHHHH
Confidence            9999999999999999987754

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=3.8e-39  Score=309.93  Aligned_cols=240  Identities=25%  Similarity=0.381  Sum_probs=205.0

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-cChHHHHHHHHHhc--------CCCCC-CEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDS--------GLESD-HILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-~g~~~lr~~lA~~~--------~~~~~-~I~~t~G~~~~i~~  161 (334)
                      .+.+.++|+.|++++++++.+++++.+ ......|++ .|.++||+++|+++        +++++ +|++|+|+++++..
T Consensus        26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~  105 (393)
T TIGR03538        26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA  105 (393)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence            356789999999999999999999886 344467865 47999999999997        36774 89999999999999


Q ss_pred             HHHHhcCCCCE--EEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ++++++++||+  |++++|+|..|...++..|++++.++.+  ++|.+|++++++++. .++|+|++++||||||.+++.
T Consensus       106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~  184 (393)
T TIGR03538       106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL  184 (393)
T ss_pred             HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence            99999999986  9999999999999999999999999963  357899999998886 589999999999999999999


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCC--Cchh---h---h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLE--SRME---W---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~--~~~~---~---~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +++++|++.    +++||+||+|.++.+++  ....   .   .  ...+++++++||||.|+++|+|+||+++++++++
T Consensus       185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~  264 (393)
T TIGR03538       185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK  264 (393)
T ss_pred             HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence            999998864    89999999999987642  1111   1   1  1357899999999999999999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      .+.+....  ++++.+.|.++.+.+.+.++++
T Consensus       265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  296 (393)
T TIGR03538       265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVR  296 (393)
T ss_pred             HHHHHHHhhccCcCHHHHHHHHHHhcChHHHH
Confidence            98887753  5789999999999998766553

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-38  Score=306.11  Aligned_cols=234  Identities=26%  Similarity=0.391  Sum_probs=201.0

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHh-cC-cCCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALG-QL-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~-~~-~~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++++|+.|++++++++.+.+++. .. .....|+++ |.++||+++|+++      ++++++|++|+|+++++..++.+
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~  108 (384)
T PRK06348         29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS  108 (384)
T ss_pred             CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence            458999999999998888876543 32 234678654 7899999999987      47889999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      ++++||+|++++|+|..|...++..|++++.++.  +++|.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus       109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l  187 (384)
T PRK06348        109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI  187 (384)
T ss_pred             hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence            9999999999999999999999999999999984  3567899999999886 688999999999999999999999998


Q ss_pred             HhC----CCeEEEccCCcCccCCCC--chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~--~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~  314 (334)
                      ++.    +++||+||+|.+|.++..  ...... ..+++++++||||.||++|+|+||+++++++++.+.+...  .+++
T Consensus       188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~  267 (384)
T PRK06348        188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA  267 (384)
T ss_pred             HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence            764    899999999999986432  222222 2579999999999999999999999999999999887765  3788


Q ss_pred             cHHHHHHHHHHhcCc
Q 019868          315 SVAAEVAACAALQNP  329 (334)
Q Consensus       315 ~~~~q~aa~~~L~~~  329 (334)
                      +.++|.++..+|++.
T Consensus       268 ~~~~q~~~~~~l~~~  282 (384)
T PRK06348        268 PTISQRAAIYALKHR  282 (384)
T ss_pred             CHHHHHHHHHHHhCc
Confidence            999999999999773

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=1.8e-38  Score=307.08  Aligned_cols=259  Identities=22%  Similarity=0.381  Sum_probs=213.0

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc-
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS-  142 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~-  142 (334)
                      +.+++..+..+    .+..+.....  ..++|+|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++++++ 
T Consensus        32 ~~~~~~~~~~~----~~~~~~~~~~--~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~  105 (413)
T PLN00175         32 VAKRLEKFKTT----IFTQMSSLAI--KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFK  105 (413)
T ss_pred             hhHHhhcCCCC----HHHHHHHHhh--cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence            35555554444    2333333322  24689999999999989988888765 32 2367854 58999999999987 


Q ss_pred             ---C--CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcc
Q 019868          143 ---G--LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVE  215 (334)
Q Consensus       143 ---~--~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~  215 (334)
                         +  ++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+.
T Consensus       106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~  185 (413)
T PLN00175        106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT  185 (413)
T ss_pred             HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC
Confidence               3  5676 79999999999999999999999999999999999999999999999999964 458999999999987


Q ss_pred             cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhh-cCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~gl~  288 (334)
                       .++|+|++++||||||.+++.+++++|++.    +++||+||+|.++.+++..  ...+ ...+++++++||||.|+++
T Consensus       186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~  264 (413)
T PLN00175        186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT  264 (413)
T ss_pred             -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence             579999999999999999999999888764    8999999999998864322  1222 2358899999999999999


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcCc-hhh
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYL  332 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~~-~~~  332 (334)
                      |+|+||+++++++++.+.+...  .++++.+.|.++.++|+++ .|+
T Consensus       265 G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~  311 (413)
T PLN00175        265 GWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYY  311 (413)
T ss_pred             chheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHH
Confidence            9999999999999999988775  3789999999999999874 443

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=5.7e-39  Score=304.24  Aligned_cols=234  Identities=37%  Similarity=0.647  Sum_probs=208.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      .++|+|+.|++++++++.+.+++.+ ......||+.|..++|+++|+++++++++|++|+|+++++..++..++++||+|
T Consensus        22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V  101 (352)
T PRK03321         22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV  101 (352)
T ss_pred             ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence            3589999999999999999998875 333466888899999999999999999999999999999999999999999999


Q ss_pred             EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeE
Q 019868          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (334)
Q Consensus       174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~l  250 (334)
                      +++.|+|..|...++..|++++.++.++++++|++.+++.++ .+++++++++||||||.+++.+++.++++.   ++++
T Consensus       102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i  180 (352)
T PRK03321        102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV  180 (352)
T ss_pred             EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence            999999999998889999999999976568899999999997 589999999999999999999999999985   8999


Q ss_pred             EEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868          251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       251 IvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+||+|.+|.+++.   ........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|+
T Consensus       181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~  260 (352)
T PRK03321        181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA  260 (352)
T ss_pred             EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence            99999999886442   223334567999999999999999999999999999999999887778999999999999997


Q ss_pred             Cc
Q 019868          328 NP  329 (334)
Q Consensus       328 ~~  329 (334)
                      +.
T Consensus       261 ~~  262 (352)
T PRK03321        261 AE  262 (352)
T ss_pred             CH
Confidence            63

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-38  Score=305.07  Aligned_cols=262  Identities=23%  Similarity=0.351  Sum_probs=211.4

Q ss_pred             HHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhc--
Q 019868           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS--  142 (334)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~--  142 (334)
                      +++..+.++. ...+..++++.+..+.++++|+.|++++++++.+.+++.+ +.  ....|++. |.++||+++++++  
T Consensus         6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~   84 (385)
T PRK09276          6 DRIKNLPPYL-FAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR   84 (385)
T ss_pred             hHhhhCCccH-HHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence            3444445442 2223334455555567799999999999999999888876 22  23678654 7899999999987  


Q ss_pred             --C--CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcc
Q 019868          143 --G--LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVE  215 (334)
Q Consensus       143 --~--~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~  215 (334)
                        |  ++++ +|++|+|+++++..++..++++||+|++++|+|+.|...++..|++++.++.+  +++.+|++++++.+.
T Consensus        85 ~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~  164 (385)
T PRK09276         85 RFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA  164 (385)
T ss_pred             HhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence              4  4566 59999999999999999999999999999999999999999999999999864  357789999998886


Q ss_pred             cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-c--hhhhc-CCCcEEEEcCCchhhcc
Q 019868          216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R--MEWVK-KHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~~~~~-~~~~~i~i~S~SK~~gl  287 (334)
                       .++++|++++||||||.+++.+++++|++.    +++||+||+|.+|.+++. .  ....+ ..+++++++||||.||+
T Consensus       165 -~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~  243 (385)
T PRK09276        165 -KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNM  243 (385)
T ss_pred             -ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCC
Confidence             589999999999999999999999888764    899999999999876432 1  11122 24678999999999999


Q ss_pred             cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868          288 AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +|+|+||+++++++++.+.+.+..  .+++.+.|.++..+|++ ..|+
T Consensus       244 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  291 (385)
T PRK09276        244 TGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVV  291 (385)
T ss_pred             cchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHH
Confidence            999999999999999999887664  35677899999999976 4444

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=8.5e-39  Score=305.62  Aligned_cols=248  Identities=22%  Similarity=0.312  Sum_probs=203.8

Q ss_pred             cHHHHHHHhCCC-CCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C--CCCCCEEEe
Q 019868           82 PFEVLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVG  152 (334)
Q Consensus        82 ~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~~I~~t  152 (334)
                      .+..+......+ +.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++|+++    |  +++++|++|
T Consensus        10 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it   89 (374)
T PRK05839         10 KLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPT   89 (374)
T ss_pred             HHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEe
Confidence            344455555555 55899999999999999999998875 3445778655 8899999998875    5  689999999


Q ss_pred             CCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          153 CGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      +|+++++..++..++  ++||.|+++.|+|+.|...++..|++++.++.+  ++|.+|+++.+  +  .++|+|+++|||
T Consensus        90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~  165 (374)
T PRK05839         90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPN  165 (374)
T ss_pred             cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCC
Confidence            999999999988765  578999999999999999999999999999964  34667665432  3  368999999999


Q ss_pred             CccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh--------cCCCcEEEEcCCchhhcccccchheeE
Q 019868          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV--------KKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       229 NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~--------~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      ||||.+++.+++++|++.    +++||+||+|.++.+........        ..++++++++||||.|+++|+|+||++
T Consensus       166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii  245 (374)
T PRK05839        166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIA  245 (374)
T ss_pred             CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEe
Confidence            999999999999999875    89999999999987533221111        235799999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868          297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +++++++.+.+.+..  ++++.+.|.++.++|.+++|++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  284 (374)
T PRK05839        246 GDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAE  284 (374)
T ss_pred             cCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHH
Confidence            999999998877653  6789999999998888776653

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-39  Score=282.70  Aligned_cols=260  Identities=62%  Similarity=0.956  Sum_probs=240.4

Q ss_pred             CCCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHH
Q 019868           61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK  140 (334)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~  140 (334)
                      .+..++++++......++.+..++.....+|+   +++.++.++++..|+|+-      +...+.||++...+++.+++.
T Consensus        10 r~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~   80 (375)
T KOG0633|consen   10 RMGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQ   80 (375)
T ss_pred             cccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhccc
Confidence            34667788888888899888888888887776   579999999998887764      345577899989999999999


Q ss_pred             hcCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-C
Q 019868          141 DSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-K  218 (334)
Q Consensus       141 ~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-~  218 (334)
                      .-++++|+|+++.|+.+.|+.++++.|.|| ++|++..|+|.+|...+...+++|+.+|.+.+|.+|.|++.+.++.+ +
T Consensus        81 dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~  160 (375)
T KOG0633|consen   81 DKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSK  160 (375)
T ss_pred             CCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcccc
Confidence            989999999999999999999999999999 99999999999999999999999999999899999999999998754 7


Q ss_pred             ceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868          219 PKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      +|++++++|+||||..+..+++.+|.+.  +.+|++||+|.+|....+.+.++.+++|++++++|||.||++|+|+||..
T Consensus       161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~  240 (375)
T KOG0633|consen  161 IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGA  240 (375)
T ss_pred             ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccc
Confidence            9999999999999999999999999997  89999999999999888999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      .+.++++.+++.+.+||+|.++..+|.++|.+.
T Consensus       241 ~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~  273 (375)
T KOG0633|consen  241 FPLSIAEILNRAKAPYNISVAGSVAALAALSDS  273 (375)
T ss_pred             ccHHHHHHHHhccCCccccchhHHHHHHhcCcc
Confidence            999999999999999999999999999999953

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.5e-38  Score=305.44  Aligned_cols=239  Identities=25%  Similarity=0.300  Sum_probs=200.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~  161 (334)
                      .+.++|+|+.|++++++++.+.+++.+ +.  ....| |..|..+||+++|+++    |  ++++ +|++|+|+++++..
T Consensus        30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~  109 (389)
T PRK08068         30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE  109 (389)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence            345689999999888888888888765 22  23679 5678999999999997    4  6777 89999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++..++++||+|++++|+|..|...++..|++++.++.+  .++.+|++++++.+. +++++|++|+||||||.+++.++
T Consensus       110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~  188 (389)
T PRK08068        110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF  188 (389)
T ss_pred             HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence            999999999999999999999999999999999999964  357889999999886 57999999999999999999999


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCC-Cc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~-~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +++|++.    +++||+||+|.++.+++ ..   ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus       189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~  268 (389)
T PRK08068        189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH  268 (389)
T ss_pred             HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence            9998764    89999999999887643 22   1222335689999999999999999999999999999999888776


Q ss_pred             C--CCcHHHHHHHHHHhcC-chhh
Q 019868          312 Y--NVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       312 ~--~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +  +.+++.|.++..+|.+ .+++
T Consensus       269 ~~~~~~~~~q~~~~~~l~~~~~~~  292 (389)
T PRK08068        269 LFVSLFGAIQDAAIEALLSDQSCV  292 (389)
T ss_pred             ccCCCChHHHHHHHHHHhCcHHHH
Confidence            4  4455678888877753 4443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=2.1e-38  Score=306.32  Aligned_cols=239  Identities=19%  Similarity=0.244  Sum_probs=200.1

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~  158 (334)
                      .++++|+|+.|+++    +++|+.+.+++.+ +.  ....| |..|.++||+++|+++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a  109 (409)
T PLN00143         30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA  109 (409)
T ss_pred             CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence            35789999999998    8999999888775 33  22568 6779999999999997      4688999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      +..++.+++++||+|++++|+|+.|...++..|++++.++.  +++|.+|+++++++++ .++++++++|||||||.+++
T Consensus       110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s  188 (409)
T PLN00143        110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS  188 (409)
T ss_pred             HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence            99999999999999999999999999999999999999985  3568899999999886 67899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-H-HH------
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------  301 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~-~~------  301 (334)
                      .+++++|++.    +++||+||+|.+|.+++.   ....+...+++++++||||.|+++|+|+||++++ + .+      
T Consensus       189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~  268 (409)
T PLN00143        189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI  268 (409)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence            9999998865    899999999999986432   2233445678999999999999999999999983 3 33      


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHhcC--chhh
Q 019868          302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYL  332 (334)
Q Consensus       302 i~~l~~~~~~-~~~~~~~q~aa~~~L~~--~~~~  332 (334)
                      ++.+.+.... ...+.++|.++.++|++  .+|+
T Consensus       269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~  302 (409)
T PLN00143        269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFF  302 (409)
T ss_pred             HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHH
Confidence            4445444433 23588999999999975  3454

>PLN02187 rooty/superroot1

Probab=100.00  E-value=3.8e-38  Score=308.38  Aligned_cols=240  Identities=22%  Similarity=0.317  Sum_probs=198.7

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~  158 (334)
                      .++++|+|+.|+++    +.+++++.+++.+ +.  ..+.| |..|..+||+++|+++      ++++++|++|+|++++
T Consensus        64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a  143 (462)
T PLN02187         64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG  143 (462)
T ss_pred             CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence            35679999999887    5567788877765 22  23678 6779999999999997      4789999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      |..++.++++|||+|++++|+|+.|...++..|++++.++.  +++|.+|+++++++++ .++++++++|||||||.+++
T Consensus       144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s  222 (462)
T PLN02187        144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS  222 (462)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence            99999999999999999999999999999999999999985  3568999999999886 67899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-H-H---HHHH
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-S---IIEY  304 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~-~---~i~~  304 (334)
                      .+++++|++.    +++||+||+|.++.+++.   ....+....++++++||||.|+++|||+||++++ + .   +++.
T Consensus       223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~  302 (462)
T PLN02187        223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV  302 (462)
T ss_pred             HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence            9999998874    899999999999886432   2222333357999999999999999999999983 3 2   3456


Q ss_pred             HHHhcCCC----CCcHHHHHHHHHHhcC--chhhc
Q 019868          305 LWRAKQPY----NVSVAAEVAACAALQN--PIYLE  333 (334)
Q Consensus       305 l~~~~~~~----~~~~~~q~aa~~~L~~--~~~~~  333 (334)
                      +.+.+..+    +++.+.|.++.++|++  .+|++
T Consensus       303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~  337 (462)
T PLN02187        303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFA  337 (462)
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHH
Confidence            66666554    3489999999999974  34543

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7e-38  Score=302.26  Aligned_cols=238  Identities=18%  Similarity=0.287  Sum_probs=200.8

Q ss_pred             CCCeeecCCCCCC-CCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCC-CCEEEeCCHHHHHHH
Q 019868           94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL  161 (334)
Q Consensus        94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~-~~I~~t~G~~~~i~~  161 (334)
                      +.+.++|+.|+++ +++++.+.+++.+ +.  ...+|++ .|.++||+++++++    |  +++ ++|++|+|+++++..
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~  117 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL  117 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence            4678999998876 5677777777654 32  2357864 58999999999886    6  567 899999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-----CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-----~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.+++++||+|++++|+|+.|...++..|++++.++.+     +++++|+++++++++ .++++|++++||||||.+++
T Consensus       118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s  196 (405)
T PRK06207        118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS  196 (405)
T ss_pred             HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence            999999999999999999999999999999999999853     368899999999986 57899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC-c--h-hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES-R--M-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      .+++++|++.    +++||+||+|.+|.+++. .  . ......+++++++||||.|+++|+|+||+++++++++.+.+.
T Consensus       197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~  276 (405)
T PRK06207        197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL  276 (405)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence            9999888764    899999999999886432 1  1 111246899999999999999999999999999999999887


Q ss_pred             cCC--CCCcHHHHHHHHHHhcCc-hhh
Q 019868          309 KQP--YNVSVAAEVAACAALQNP-IYL  332 (334)
Q Consensus       309 ~~~--~~~~~~~q~aa~~~L~~~-~~~  332 (334)
                      ...  .+.+.+.|.++..+|+++ .|+
T Consensus       277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~  303 (405)
T PRK06207        277 QAIVSLRAAGYSQAVLRTWFSEPDGWM  303 (405)
T ss_pred             HhHhccCCCHHHHHHHHHHHhCcHHHH
Confidence            765  457889999999999864 444

>PRK07324 transaminase; Validated

Probab=100.00  E-value=2.9e-38  Score=301.81  Aligned_cols=239  Identities=23%  Similarity=0.246  Sum_probs=204.7

Q ss_pred             HhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHHHHHHH
Q 019868           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      +++..+.++++|+.|++++.+|+.+ +++.+ +. ....| +..|.++||+++|+++ ++++++|++|+|+++++.+++.
T Consensus        20 ~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~   98 (373)
T PRK07324         20 TYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLY   98 (373)
T ss_pred             ccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence            4556678899999999999888777 55433 32 23578 4568999999999988 4789999999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      +++++||+|+++.|+|..|...++..|++++.++.+  ++|.+|++++++.++ +++|+|++++||||||.+++.+++++
T Consensus        99 ~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~  177 (373)
T PRK07324         99 ALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEE  177 (373)
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999954  457789999999886 68999999999999999999888877


Q ss_pred             HHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcH
Q 019868          243 ILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSV  316 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~  316 (334)
                      |++.    ++++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+.+..  ++.+.
T Consensus       178 i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~  257 (373)
T PRK07324        178 IVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGV  257 (373)
T ss_pred             HHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCCh
Confidence            7653    99999999999988754333333446789999999999999999999999999999999998875  57889


Q ss_pred             HHHHHHHHHhcCc
Q 019868          317 AAEVAACAALQNP  329 (334)
Q Consensus       317 ~~q~aa~~~L~~~  329 (334)
                      +.|.++..+|++.
T Consensus       258 ~~q~~a~~~l~~~  270 (373)
T PRK07324        258 FDDMLASLALEHR  270 (373)
T ss_pred             HHHHHHHHHHcCH
Confidence            9999999999863

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=1.1e-37  Score=299.24  Aligned_cols=243  Identities=25%  Similarity=0.357  Sum_probs=206.4

Q ss_pred             HHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHH
Q 019868           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGAD  156 (334)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~  156 (334)
                      ...+....+.++++|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++|+++    +  +++++|++|+|++
T Consensus        21 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~  100 (388)
T PRK07337         21 EAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGAS  100 (388)
T ss_pred             HHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcH
Confidence            3334444556789999999999888988888875 32 3356854 48999999999986    3  5889999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +++..++..++++||+|++++|+|+.+...++..|++++.++.+  ++|.+|++++++.+. +++++|++++||||||.+
T Consensus       101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~  179 (388)
T PRK07337        101 AALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTS  179 (388)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcC
Confidence            99999999999999999999999999999888999999999864  357999999999987 688999999999999999


Q ss_pred             CcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          235 INDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      ++.+++++|++.    ++++|+||+|.++.+.+.........+++++++||||.||++|+|+||+++++++++.+.+...
T Consensus       180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~  259 (388)
T PRK07337        180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQ  259 (388)
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHH
Confidence            999999888764    8999999999998765433233334578999999999999999999999999999999888776


Q ss_pred             C--CCCcHHHHHHHHHHhcCc
Q 019868          311 P--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       311 ~--~~~~~~~q~aa~~~L~~~  329 (334)
                      .  .+++.++|.++..++++.
T Consensus       260 ~~~~~~s~~~q~~~~~~l~~~  280 (388)
T PRK07337        260 NLFICASALAQHAALACFEPD  280 (388)
T ss_pred             HhccCCChHHHHHHHHHhccC
Confidence            5  468999999999999754

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=5.1e-38  Score=309.45  Aligned_cols=261  Identities=18%  Similarity=0.254  Sum_probs=207.6

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCC---------CCCCeeecCCCCCC----------------CCC------------
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGR---------KPEDIVKIDANENP----------------YGP------------  109 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~----------------~~~------------  109 (334)
                      +++++..++++. ...+...+.++..         ++.++|+|++|+|+                +..            
T Consensus        10 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~   88 (481)
T PTZ00377         10 INPRVVAAEYAV-RGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL   88 (481)
T ss_pred             cCHHHhhhhhhc-CChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence            355566666653 3444444444422         45789999999995                655            


Q ss_pred             -CHHHHHHHhc----Cc-CCCCCC-CcChHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEE
Q 019868          110 -PPEVREALGQ----LK-FPYIYP-DPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVD  175 (334)
Q Consensus       110 -~~~v~~al~~----~~-~~~~Yp-~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~  175 (334)
                       |..+.+++.+    .. ....|+ ..|.++||+++|++++      +++++|++|+|+++++..++++++ ++||+|++
T Consensus        89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv  168 (481)
T PTZ00377         89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI  168 (481)
T ss_pred             CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence             3366665542    11 235685 4589999999999973      678999999999999999999998 79999999


Q ss_pred             cCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC--
Q 019868          176 CPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM--  246 (334)
Q Consensus       176 ~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--  246 (334)
                      ++|+|+.|...++..|++++.++.+  ++|.+|++++++++++     .++|+|+++|||||||.+++.+++++|+++  
T Consensus       169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~  248 (481)
T PTZ00377        169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY  248 (481)
T ss_pred             CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence            9999999999999999999999854  4588999999998863     178999999999999999999999988875  


Q ss_pred             --CCeEEEccCCcCccCCC--Cchh---h---hcC----CCcEEEEcCCchh-hcccccchheeEc---CHHHHHHHHHh
Q 019868          247 --PILVVLDEAYTEFSGLE--SRME---W---VKK----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRA  308 (334)
Q Consensus       247 --~~~lIvDeay~~~~~~~--~~~~---~---~~~----~~~~i~i~S~SK~-~gl~G~R~G~l~~---~~~~i~~l~~~  308 (334)
                        +++||+||+|.++.+++  ....   .   +..    ..++++++||||. ++++|||+||+++   ++++++.+.+.
T Consensus       249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~  328 (481)
T PTZ00377        249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL  328 (481)
T ss_pred             HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH
Confidence              89999999999987632  2111   1   111    1379999999997 6999999999986   89999999887


Q ss_pred             cCC-CCCcHHHHHHHHHHhcC
Q 019868          309 KQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 ~~~-~~~~~~~q~aa~~~L~~  328 (334)
                      +.. ++++.++|.++..+|++
T Consensus       329 ~~~~~~~~~~~Q~a~~~~l~~  349 (481)
T PTZ00377        329 ASINLCSNVVGQLMTGLMCNP  349 (481)
T ss_pred             hheecCCChHHHHHHHHHhCC
Confidence            754 58999999999999975

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=3.1e-38  Score=309.49  Aligned_cols=237  Identities=20%  Similarity=0.301  Sum_probs=197.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-c-------------CCCCCCCc-ChHHHHHHHHHhcC--------CCCCCEE
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL  150 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Yp~~-g~~~lr~~lA~~~~--------~~~~~I~  150 (334)
                      +..+|+|+++||++.. +.+.+.++.. .             ....|++. |.++||+++|++++        +++++|+
T Consensus        37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii  115 (468)
T PLN02450         37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV  115 (468)
T ss_pred             CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence            4578999999999877 6666666542 1             12448765 88999999999983        6889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeC--CCCCCCCHHHHHHhccc-----CCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~--~~~~~~d~~~l~~~l~~-----~~~~~i  222 (334)
                      +|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.++.  +++|.+|++++++++++     .++|+|
T Consensus       116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v  195 (468)
T PLN02450        116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV  195 (468)
T ss_pred             EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            99999999999999999999999999999999988877 58999999995  46788899999988753     378999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-Cc---hhhh--------cCCCcEEEEcCCchhhc
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWV--------KKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~---~~~~--------~~~~~~i~i~S~SK~~g  286 (334)
                      ++||||||||.+++.+++++|++.    +++||+||+|.++.+.+ ..   ....        +..+++++++||||.||
T Consensus       196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~  275 (468)
T PLN02450        196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG  275 (468)
T ss_pred             EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence            999999999999999999999875    89999999999876543 21   2221        13579999999999999


Q ss_pred             ccccchheeEcCH-HHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868          287 LAGLRVGYGAFPL-SIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       287 l~G~R~G~l~~~~-~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      ++|+|+||+++++ .+++.+.+.....+++.++|.++..+|+|++|
T Consensus       276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~  321 (468)
T PLN02450        276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKF  321 (468)
T ss_pred             CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchh
Confidence            9999999999975 46777777654556899999999999999754

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-37  Score=299.53  Aligned_cols=242  Identities=24%  Similarity=0.304  Sum_probs=199.7

Q ss_pred             HHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCC
Q 019868           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCG  154 (334)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G  154 (334)
                      ++.+.+..+.++++|+.|.++.++|+.+.+++.+ +.  ....|++ .|.++||+++|+++    +  ++++ +|++|+|
T Consensus        26 ~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G  105 (394)
T PRK05942         26 LKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLG  105 (394)
T ss_pred             HHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccC
Confidence            3333444456789999998777767666665443 32  2367865 48899999999987    4  5677 4899999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      +++++..++.+++++||+|++++|+|+.+...+...|++++.++.+  ++|.+|++++++.+. +++|+|+++|||||||
T Consensus       106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG  184 (394)
T PRK05942        106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTT  184 (394)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCC
Confidence            9999999999999999999999999999998888899999999864  457899999999886 6899999999999999


Q ss_pred             cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       233 ~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      .+++.+++++|++.    +++||+||+|.++.+++.   ....+. ..+++++++||||.||++|+|+||+++++++++.
T Consensus       185 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~  264 (394)
T PRK05942        185 ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQG  264 (394)
T ss_pred             CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHH
Confidence            99999998888764    899999999999886432   122222 2456799999999999999999999999999999


Q ss_pred             HHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          305 LWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       305 l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +.+.+.  .++++.++|.++.++|++
T Consensus       265 l~~~~~~~~~~~~~~~q~~~~~~l~~  290 (394)
T PRK05942        265 LRTLKTNLDYGIFSALQKAAETALQL  290 (394)
T ss_pred             HHHHHhhcccCCCHHHHHHHHHHHhC
Confidence            988776  467889999999999975

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=1.3e-37  Score=300.41  Aligned_cols=240  Identities=23%  Similarity=0.316  Sum_probs=197.0

Q ss_pred             CCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHH
Q 019868           92 RKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELID  160 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~  160 (334)
                      ..+.++|+|+.|++++++++.+.+++.+ +.  ...+|++ .|..+||+++|+++    |  ++++ +|++|+|+++++.
T Consensus        27 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~  106 (405)
T PRK09148         27 AAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA  106 (405)
T ss_pred             hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence            3456789999999999988888888765 22  2367865 48999999999987    4  5677 8999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC--CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .++..++++||+|++++|+|+.|...+...|++++.++.+.+  +..++++..+... +++++|++++||||||.+++.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~  185 (405)
T PRK09148        107 NMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLD  185 (405)
T ss_pred             HHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999999999999999999986432  4344555444333 5789999999999999999999


Q ss_pred             HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      ++++|++.    +++||+||+|.+|.+++...   .... ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus       186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~  265 (405)
T PRK09148        186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS  265 (405)
T ss_pred             HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH
Confidence            98888764    89999999999987643221   1122 2457889999999999999999999999999999988776


Q ss_pred             C--CCCcHHHHHHHHHHhcC-chhh
Q 019868          311 P--YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       311 ~--~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      .  ++++.+.|.++..+|++ .+|+
T Consensus       266 ~~~~~~~~~~q~~~~~~L~~~~~~~  290 (405)
T PRK09148        266 YLDYGAFTPIQVAATAALNGPQDCI  290 (405)
T ss_pred             HhccCCChHHHHHHHHHHhCcHHHH
Confidence            3  67889999999999986 3444

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=1.4e-37  Score=300.52  Aligned_cols=235  Identities=21%  Similarity=0.299  Sum_probs=202.2

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~  158 (334)
                      .+.++|+|++|+++    +++|+.+++++.+ +.  ....| |..|.++||+++++++      ++++++|++|+|++++
T Consensus        29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a  108 (409)
T PLN02656         29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA  108 (409)
T ss_pred             cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence            46789999999997    8889999998876 33  23678 6679999999999997      3678999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      +..++.+++++||+|++++|+|+.|...+...|++++.++..  ++|.+|++.+++.++ .+++++++++||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s  187 (409)
T PLN02656        109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS  187 (409)
T ss_pred             HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence            999999999999999999999999998888899999999853  467899999999886 57899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC--------HHH
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI  301 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--------~~~  301 (334)
                      .+++++|++.    +++||+||+|.+|.+++.   ....+...+++++++||||.|+++|+|+||++++        +++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~  267 (409)
T PLN02656        188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI  267 (409)
T ss_pred             HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence            9999888775    899999999999986542   2222345578999999999999999999999983        578


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868          302 IEYLWRAKQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       302 i~~l~~~~~~-~~~~~~~q~aa~~~L~~  328 (334)
                      ++.+.+.... .+++.++|.++..+|++
T Consensus       268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~  295 (409)
T PLN02656        268 VERIKKYFDILGGPATFIQAAVPTILEQ  295 (409)
T ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHhc
Confidence            8888877654 36889999999999974

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=1.3e-37  Score=298.33  Aligned_cols=236  Identities=23%  Similarity=0.433  Sum_probs=202.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc----CCC--C-CCEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~----~~~--~-~~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++    |++  + ++|++|+|+++++..+++
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~  108 (384)
T PRK12414         29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS  108 (384)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence            4689999999999999999888765 22 23678 5668999999999874    653  4 689999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++++||+|++++|+|..|...++..|++++.++.+ +++.+|++.+++.++ +++++|++++||||||.+++.+++++|
T Consensus       109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i  187 (384)
T PRK12414        109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL  187 (384)
T ss_pred             HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999965 467899999999997 689999999999999999999999888


Q ss_pred             HhC----CCeEEEccCCcCccCCCCc---hhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~  313 (334)
                      ++.    ++++|+||+|.++.+++..   .... ...+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~  267 (384)
T PRK12414        188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS  267 (384)
T ss_pred             HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence            764    8999999999998764321   1111 22568999999999999999999999999999999988774  478


Q ss_pred             CcHHHHHHHHHHhcCchh
Q 019868          314 VSVAAEVAACAALQNPIY  331 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~~~  331 (334)
                      ++.+.|.++..+|+++++
T Consensus       268 ~s~~~q~a~~~~l~~~~~  285 (384)
T PRK12414        268 ADTPMQHAFAEALAEPAS  285 (384)
T ss_pred             CCcHHHHHHHHHhcCChH
Confidence            999999999999988654

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.8e-37  Score=297.26  Aligned_cols=239  Identities=25%  Similarity=0.344  Sum_probs=201.0

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~  161 (334)
                      .+.++++|+.|++++++++.+.+++.+ +.  ...+|+++ |.++||+++|+++    +  ++++ +|++|+|+++++..
T Consensus        27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~  106 (383)
T TIGR03540        27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH  106 (383)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence            456789999999999989988888765 22  23678664 7899999999986    3  3555 69999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++..++++||+|++++|+|+.|...++..|++++.++.+  +++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus       107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~~  185 (383)
T TIGR03540       107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKF  185 (383)
T ss_pred             HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHHH
Confidence            999999999999999999999999999999999999964  357789999999886 68999999999999999999988


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCC-chh--hhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLES-RME--WVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +++|++.    ++++|+||+|.++.+.+. ...  ... ..+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus       186 ~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~  265 (383)
T TIGR03540       186 FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTN  265 (383)
T ss_pred             HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHh
Confidence            8888764    899999999998876431 111  122 24678999999999999999999999999999998877654


Q ss_pred             --CCCcHHHHHHHHHHhcC-chhh
Q 019868          312 --YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       312 --~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                        .+++.+.|.++..+|++ .+|+
T Consensus       266 ~~~~~~~~~q~~~~~~l~~~~~~~  289 (383)
T TIGR03540       266 VDSGVFQAIQYAAIAALNGPQDVV  289 (383)
T ss_pred             cccCCChHHHHHHHHHHhCCHHHH
Confidence              46788999999999987 4554

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=2.1e-37  Score=292.61  Aligned_cols=238  Identities=45%  Similarity=0.778  Sum_probs=210.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~  172 (334)
                      +.++|+|++|++++++||++++++.+. .....|+++..+++|+++|+++++++++|++|+|+++++..++.+++++||+
T Consensus        18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~   97 (346)
T TIGR01141        18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDA   97 (346)
T ss_pred             CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence            357999999999999999999998863 3346787776699999999999999999999999999999999999999999


Q ss_pred             EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCe
Q 019868          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (334)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~  249 (334)
                      |++++|+|+.|...++..|++++.++.++++.+|++++++.+. +++++|++++|+||||.+++.+++.++++.   +++
T Consensus        98 v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~  176 (346)
T TIGR01141        98 VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDAL  176 (346)
T ss_pred             EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcE
Confidence            9999999999998889999999999977677899999999875 689999999999999999999999999986   799


Q ss_pred             EEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       250 lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +|+||+|.++.............+++++++|+||.||++|+|+||+++++++++.+.+....++++.++|.++.+++++.
T Consensus       177 ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  256 (346)
T TIGR01141       177 VVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDD  256 (346)
T ss_pred             EEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCH
Confidence            99999999877543333334445689999999999999999999999999999999888878899999999999999886


Q ss_pred             hhh
Q 019868          330 IYL  332 (334)
Q Consensus       330 ~~~  332 (334)
                      +++
T Consensus       257 ~~~  259 (346)
T TIGR01141       257 DFI  259 (346)
T ss_pred             HHH
Confidence            543

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=4.7e-37  Score=298.43  Aligned_cols=234  Identities=24%  Similarity=0.370  Sum_probs=195.4

Q ss_pred             CCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc------CCCCCCEEEeCCHHHHH
Q 019868           94 PEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADELI  159 (334)
Q Consensus        94 ~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i  159 (334)
                      +.++|+|+.|++.    +++++++.+++.+ +.  ....|++ .|.++||+++|+++      ++++++|++|+|++++|
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al  130 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI  130 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence            5689999999984    7788899888775 32  2357854 58999999999997      35789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      .+++..++++||+|++++|+|+.|...+...|++++.++.  +++|.+|++.+++.++ +++++++++|||||||.+++.
T Consensus       131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~  209 (430)
T PLN00145        131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY  209 (430)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999874  4568999999999886 689999999999999999999


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCC-C--chhhhcCCCcEEEEcCCchhhcccccchheeEc--CHHHH------
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLE-S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSII------  302 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~-~--~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~~i------  302 (334)
                      +++++|++.    +++||+||+|.+|.++. .  ....+...+++++++||||.|+++|||+||+++  ++.++      
T Consensus       210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~  289 (430)
T PLN00145        210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV  289 (430)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence            988888764    99999999999988643 2  222234567899999999999999999999997  44443      


Q ss_pred             HHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868          303 EYLWRAKQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       303 ~~l~~~~~~-~~~~~~~q~aa~~~L~~  328 (334)
                      +.+.+.... .+++.+.|.++..+|++
T Consensus       290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~  316 (430)
T PLN00145        290 DSIRNYLNISTDPATFVQGAIPQIIAN  316 (430)
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence            344444433 35788999999999986

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=3.3e-37  Score=298.26  Aligned_cols=235  Identities=20%  Similarity=0.292  Sum_probs=199.3

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhcC------------CCCCCEEEe
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG  152 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~~------------~~~~~I~~t  152 (334)
                      .+.++|+|+.|+++    +.+++.+.+++.+ +.  ....|+++ |..+||+++|++++            +++++|++|
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it  110 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC  110 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence            45788999999986    5678888888876 32  24679765 89999999999875            678999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +|+++++.+++..++++||+|+++.|+|..|...++..|++++.++.+  +++++|++++++.++ .++++|+++|||||
T Consensus       111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP  189 (412)
T PTZ00433        111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP  189 (412)
T ss_pred             CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence            999999999999999999999999999999999999999999999853  468999999999886 57999999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEc------
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF------  297 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~------  297 (334)
                      ||.+++.+++++|++.    +++||+||+|.+|.+++..   ........++++++||||.||++|+|+||+++      
T Consensus       190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~  269 (412)
T PTZ00433        190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN  269 (412)
T ss_pred             CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence            9999999999888764    8999999999998864321   12222334689999999999999999999997      


Q ss_pred             CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868          298 PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       298 ~~~~i~~l~~~~~~-~~~~~~~q~aa~~~L~~  328 (334)
                      ++++++.+.+.... ++++.+.|.++..+|.+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  301 (412)
T PTZ00433        270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLN  301 (412)
T ss_pred             HHHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence            24688888776553 68999999999999975

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.8e-37  Score=296.34  Aligned_cols=248  Identities=21%  Similarity=0.306  Sum_probs=201.2

Q ss_pred             HHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeC
Q 019868           85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGC  153 (334)
Q Consensus        85 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~  153 (334)
                      ..+......+.++++|+.|+++.+.++.+.+++.+ ..  ....|++ .|..+||+++|+++    +  ++++ +|++|+
T Consensus        23 ~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~  102 (403)
T PRK08636         23 ELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATM  102 (403)
T ss_pred             HHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence            34444445567789999998887777766666543 32  2467965 58999999999987    5  5677 799999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHH----HHhccc--CCceEEEEe
Q 019868          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLT  225 (334)
Q Consensus       154 G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l----~~~l~~--~~~~~i~l~  225 (334)
                      |+++++..++.+++++||.|++++|+|+.|...++..|++++.++.  ++++++|++.+    ++++++  .++++++++
T Consensus       103 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~  182 (403)
T PRK08636        103 GSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN  182 (403)
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence            9999999999999999999999999999999999999999999985  35588998754    555532  478999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcC-CCcEEEEcCCchhhcccccchheeEc
Q 019868          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      +||||||.+++.+++++|++.    +++||+||+|.++.+++.   ....++. .+++++++||||.||++|+|+||+++
T Consensus       183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~  262 (403)
T PRK08636        183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG  262 (403)
T ss_pred             CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeC
Confidence            999999999999999999875    899999999999886532   1222222 35778899999999999999999999


Q ss_pred             CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868          298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       298 ~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      ++++++.+.+....  ++++.+.|.++..++++ .+|+
T Consensus       263 ~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~  300 (403)
T PRK08636        263 NKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCV  300 (403)
T ss_pred             CHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHH
Confidence            99999998887653  67788899999888864 3443

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=4e-37  Score=294.32  Aligned_cols=234  Identities=29%  Similarity=0.446  Sum_probs=200.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCC-CcChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+ +. ....|+ ..|.++||+++|++++      ++++ +|++|+|+++++.+++.
T Consensus        20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~   99 (378)
T PRK07682         20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR   99 (378)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            4679999999999988888877765 22 235684 5789999999999973      4565 79999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      +++++||+|++++|+|+.|...++..|++++.++.+  +++++|++++++++. ++++++++++||||||.+++.+++++
T Consensus       100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~  178 (378)
T PRK07682        100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE  178 (378)
T ss_pred             HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence            999999999999999999999999999999999853  468999999999986 58999999999999999999999988


Q ss_pred             HHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          243 ILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      |++.    ++++|+||+|.++.+++..   ....+..+++++++||||.||++|+|+||+++++++++.+.+....  ++
T Consensus       179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~  258 (378)
T PRK07682        179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC  258 (378)
T ss_pred             HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence            8764    8999999999999875432   1222235789999999999999999999999999999998876653  57


Q ss_pred             CcHHHHHHHHHHhcCc
Q 019868          314 VSVAAEVAACAALQNP  329 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~  329 (334)
                      ++.++|.++.++|++.
T Consensus       259 ~~~~~q~a~~~~l~~~  274 (378)
T PRK07682        259 APTMAQFAALEALRAG  274 (378)
T ss_pred             CCHHHHHHHHHHHhCC
Confidence            8999999999999874

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=4.3e-37  Score=296.42  Aligned_cols=239  Identities=20%  Similarity=0.296  Sum_probs=199.8

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhcC-----CCCCCEEEeCCHHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~~-----~~~~~I~~t~G~~~~i  159 (334)
                      +++++++|+.|+++    +++++.+.+++.+ +.  ....| |..|..+||+++|++++     +++++|++|+|+++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al  108 (401)
T TIGR01264        29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI  108 (401)
T ss_pred             cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence            34678999999884    7888999888875 22  22568 67799999999999986     7889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      .+++.+++++||+|++++|+|..|...++..|++++.++.+  +++++|++.+++.++ .+++++++++||||||.+++.
T Consensus       109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~  187 (401)
T TIGR01264       109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR  187 (401)
T ss_pred             HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999998753  458999999999886 578999999999999999999


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCCC-chh--hhcCCCcEEEEcCCchhhcccccchheeEcCH------HHHHH
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY  304 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~------~~i~~  304 (334)
                      +++++|++.    +++||+||+|.+|.+++. ...  ......++++++||||.|+++|+|+||+++++      ++++.
T Consensus       188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~  267 (401)
T TIGR01264       188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG  267 (401)
T ss_pred             HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence            999988874    899999999999986432 222  22223469999999999999999999999864      46666


Q ss_pred             HHHhcC-CCCCcHHHHHHHHHHhcC--chhh
Q 019868          305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYL  332 (334)
Q Consensus       305 l~~~~~-~~~~~~~~q~aa~~~L~~--~~~~  332 (334)
                      +.+... .++++.++|.++..+|++  .+|+
T Consensus       268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l  298 (401)
T TIGR01264       268 LVKLSQRILGPCTIVQGALPSILLRTPQEYF  298 (401)
T ss_pred             HHHHhhccCCCCcHHHHHHHHHHHhCcHHHH
Confidence            666554 467899999999999976  3444

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=5.4e-37  Score=290.61  Aligned_cols=236  Identities=25%  Similarity=0.382  Sum_probs=200.2

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHHHhc
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~~l~  167 (334)
                      +++|+.|++++++++++.+++++ ......|+++ |..+||+++++++    |  ++++ +|++|+|+++++..++..++
T Consensus         2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~   81 (350)
T TIGR03537         2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI   81 (350)
T ss_pred             eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence            58999999999999999999886 3344679765 7899999999986    5  5677 99999999999999999999


Q ss_pred             CCC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       168 ~~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ++|   |+|+++.|+|+.|...++..|++++.++.+  +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus        82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~  160 (350)
T TIGR03537        82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE  160 (350)
T ss_pred             CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence            887   699999999999999999999999999964  457789999999986 58999999999999999999888888


Q ss_pred             HHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC--CCc
Q 019868          243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVS  315 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~--~~~  315 (334)
                      |++.    ++++|+||+|.++.++....... .+.+++++++||||.||++|+|+||+++++++++.+.+.+..+  +.+
T Consensus       161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  240 (350)
T TIGR03537       161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP  240 (350)
T ss_pred             HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence            8764    89999999999876543222111 1357999999999999999999999999999999998877654  455


Q ss_pred             HHHHHHHHHHhcCchhhc
Q 019868          316 VAAEVAACAALQNPIYLE  333 (334)
Q Consensus       316 ~~~q~aa~~~L~~~~~~~  333 (334)
                      .+.|.++.++|.+.+|++
T Consensus       241 ~~~q~~~~~~l~~~~~~~  258 (350)
T TIGR03537       241 DFVQAAAKAAWSDDNHVL  258 (350)
T ss_pred             HHHHHHHHHHhCCcHHHH
Confidence            578898888888766653

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=4.8e-37  Score=289.01  Aligned_cols=210  Identities=24%  Similarity=0.357  Sum_probs=178.7

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~  175 (334)
                      ++|+|+.|+||++..          ....+||++...+||+++|+++++++++|++|+|+++++..++. ++++|+ |++
T Consensus        17 ~~i~l~~Nenp~~~~----------~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~   84 (332)
T PRK06425         17 RIIDFSANINDFMDI----------GDISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III   84 (332)
T ss_pred             CEEEeccccCCCcCh----------hhcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence            589999999999522          22367999989999999999999999999999999999999997 567764 667


Q ss_pred             cCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEE
Q 019868          176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV  251 (334)
Q Consensus       176 ~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lI  251 (334)
                      ++|+|+.|...++..|++++.+|.++ +.+|.+.+++    .++|+|++||||||||.+++.+++++|++.    +++||
T Consensus        85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI  159 (332)
T PRK06425         85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF  159 (332)
T ss_pred             eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence            79999999999999999999999753 4566555542    478999999999999999999999998864    89999


Q ss_pred             EccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHH
Q 019868          252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA  322 (334)
Q Consensus       252 vDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa  322 (334)
                      +||+|.+|.++.  +........+++++++||||.||++|+|+||+++++++++.+.+...+++++.+++.++
T Consensus       160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l  232 (332)
T PRK06425        160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFI  232 (332)
T ss_pred             EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHH
Confidence            999999998643  23334445689999999999999999999999999999999999888888877766544

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=4.1e-37  Score=289.21  Aligned_cols=231  Identities=22%  Similarity=0.275  Sum_probs=190.1

Q ss_pred             CcHHHHHHHhCCCCCCeeecCCCCCCCCCCH-HHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHH
Q 019868           81 LPFEVLSIQLGRKPEDIVKIDANENPYGPPP-EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI  159 (334)
Q Consensus        81 ~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i  159 (334)
                      .....++..+|.+..++|+|+.|++|+++++ .+.+.  .   ...||+.. .+||++++++++.  ++|++|+|++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~~--~---~~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al   77 (330)
T PRK05664          6 GRLRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPAD--A---WARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAI   77 (330)
T ss_pred             chHHHHHHHcCCCHHHheeecCCcCCCCCCCcccCHH--H---HHhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHH
Confidence            3344556666665567899999999988763 22211  1   14488754 8999999999985  6999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      .+++.  +.+||+|++++|+|+.|...++..|++++.++.        +++++.++  +++++++++||||||.+++.++
T Consensus        78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~--------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~  145 (330)
T PRK05664         78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE--------AEVEAALD--SLDVLVVVNPNNPTGRRFDPAR  145 (330)
T ss_pred             HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech--------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHH
Confidence            98864  589999999999999999999999999999874        23455553  5789999999999999999999


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCc
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS  315 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~  315 (334)
                      +++|++.    +++||+||+|.++....+... ....+++++++||||.||++|+|+||+++++++++.+.+...+++++
T Consensus       146 l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~-~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~  224 (330)
T PRK05664        146 LLAWHARLAARGGWLVVDEAFMDNTPQHSLAA-CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVS  224 (330)
T ss_pred             HHHHHHHHHhcCCEEEEECCcccCCCcccccc-cccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCC
Confidence            9999753    899999999988764333222 33467899999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHhcCchhh
Q 019868          316 VAAEVAACAALQNPIYL  332 (334)
Q Consensus       316 ~~~q~aa~~~L~~~~~~  332 (334)
                      .++|.++.++|++.++.
T Consensus       225 ~~~~~~~~~~L~~~~~~  241 (330)
T PRK05664        225 GPTRWLAQAALADTPWQ  241 (330)
T ss_pred             HHHHHHHHHHHhChHHH
Confidence            99999999999986654

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=2.4e-37  Score=300.86  Aligned_cols=234  Identities=20%  Similarity=0.251  Sum_probs=196.8

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCc-ChHHHHHHHHHhcC--CC-CCCEEEeCCHHHHHHHHHHHhcCC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSG--LE-SDHILVGCGADELIDLIMRCVLDP  169 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~-g~~~lr~~lA~~~~--~~-~~~I~~t~G~~~~i~~~~~~l~~~  169 (334)
                      ..+++|+.|.++.+++|.+.+++.+. .....|+++ |..+||++++++++  +. +++|++|+|++++|..++.++++|
T Consensus        85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p  164 (431)
T PRK15481         85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP  164 (431)
T ss_pred             chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence            45789999988877777788887763 333568654 78999999999986  33 469999999999999999999999


Q ss_pred             CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC--
Q 019868          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM--  246 (334)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~--  246 (334)
                      ||.|++++|+|+.|...++..|++++.++.+++ ++|++.++++++ .++|+++++ +||||||.+++.+++++|+++  
T Consensus       165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~  242 (431)
T PRK15481        165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA  242 (431)
T ss_pred             CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence            999999999999999999999999999997544 689999999986 578999998 999999999999977766553  


Q ss_pred             ---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHH
Q 019868          247 ---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA  321 (334)
Q Consensus       247 ---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~a  321 (334)
                         +++||+||+|.+|.+.+.........+++++++||||.|| +|+|+||+++++++++.+.+....  +++|.++|.+
T Consensus       243 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a  321 (431)
T PRK15481        243 RYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDL  321 (431)
T ss_pred             hcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHH
Confidence               7899999999999754321111124579999999999999 999999999999999998766554  5689999999


Q ss_pred             HHHHhcCchh
Q 019868          322 ACAALQNPIY  331 (334)
Q Consensus       322 a~~~L~~~~~  331 (334)
                      +.++|++++|
T Consensus       322 ~~~~l~~~~~  331 (431)
T PRK15481        322 VYACLTDPEY  331 (431)
T ss_pred             HHHHHhCccH
Confidence            9999998765

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.9e-36  Score=292.28  Aligned_cols=247  Identities=22%  Similarity=0.329  Sum_probs=198.0

Q ss_pred             HHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEE
Q 019868           83 FEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILV  151 (334)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~  151 (334)
                      +...+.+....+.++++|+.|++   ++++++.+.+++.+ +.....|+++ |.++||+++|+++      ++++++|++
T Consensus        21 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~  100 (404)
T PRK09265         21 VLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI  100 (404)
T ss_pred             HHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE
Confidence            33344444445568899999866   56688888887764 3344678655 7899999999998      688999999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       152 t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      |+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+  +++.+|++++++.++ .++++|++++|||
T Consensus       101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~N  179 (404)
T PRK09265        101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNN  179 (404)
T ss_pred             eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCC
Confidence            9999999999999999999999999999999999999999999988743  357899999999886 6799999999999


Q ss_pred             ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEc--CHH
Q 019868          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS  300 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~  300 (334)
                      |||.+++.+++++|++.    ++++|+||+|.++.+++.   .........++++++||||.||++|+|+||+++  +++
T Consensus       180 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~  259 (404)
T PRK09265        180 PTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKK  259 (404)
T ss_pred             CCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchH
Confidence            99999998888777654    899999999999876432   122222334789999999999999999999996  443


Q ss_pred             ----HHHHHHHhcC-CCCCcHHHHHHHHHHhcCch
Q 019868          301 ----IIEYLWRAKQ-PYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       301 ----~i~~l~~~~~-~~~~~~~~q~aa~~~L~~~~  330 (334)
                          +++.+..... .+++|.++|.++.++|.+.+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~  294 (404)
T PRK09265        260 HAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQ  294 (404)
T ss_pred             HHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCch
Confidence                4444443322 36789999999999998643

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.6e-37  Score=304.30  Aligned_cols=240  Identities=24%  Similarity=0.377  Sum_probs=193.3

Q ss_pred             CCCCeeecCCCCCCC--CC-CHHHHHHHhc-------C---cCCCCCCC-cChHHHHHHHHHhcC--------CCCCCEE
Q 019868           93 KPEDIVKIDANENPY--GP-PPEVREALGQ-------L---KFPYIYPD-PESRRLRAALAKDSG--------LESDHIL  150 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~--~~-~~~v~~al~~-------~---~~~~~Yp~-~g~~~lr~~lA~~~~--------~~~~~I~  150 (334)
                      .+..+|+|+.+||++  .. ++.+++....       +   .....|++ .|.++||+++|++++        +++++|+
T Consensus        44 np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Iv  123 (496)
T PLN02376         44 NPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVV  123 (496)
T ss_pred             CCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEE
Confidence            345789999999988  43 4455543321       1   11234643 488999999999874        7899999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCC--CCCCCCHHHHHHhcc-----cCCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~--~~~~~d~~~l~~~l~-----~~~~~~i  222 (334)
                      +|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.++.+  ++|++|++.++++++     ..++|+|
T Consensus       124 it~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l  203 (496)
T PLN02376        124 MSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGL  203 (496)
T ss_pred             EccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            99999999999999999999999999999999998777 589999999963  568999999986642     1478999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-Cchh---hhcC-------CCcEEEEcCCchhhcc
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SRME---WVKK-------HDNLIVLRTFSKRAGL  287 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~---~~~~-------~~~~i~i~S~SK~~gl  287 (334)
                      +++|||||||.+++.+++++|++.    +++||+||+|.++.+.+ ....   ....       .+++++++||||.||+
T Consensus       204 ~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~gl  283 (496)
T PLN02376        204 ILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGL  283 (496)
T ss_pred             EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCC
Confidence            999999999999999999998875    89999999999987543 2211   2111       1467889999999999


Q ss_pred             cccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       288 ~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +|+|+||+++ ++.+.+.+.+....+.++.++|.++.++|++++|+
T Consensus       284 pGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~  329 (496)
T PLN02376        284 PGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFV  329 (496)
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHH
Confidence            9999999999 56676766666655678999999999999998774

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-36  Score=290.05  Aligned_cols=237  Identities=25%  Similarity=0.391  Sum_probs=202.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++++|+.|++++++++.+.+++.+. . ....|++ .|.++||+++++++    |  +++++|++|+|+++++..++..
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~  103 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA  103 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence            46899999999999999999998763 2 2245854 58999999999986    5  7889999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ++++||+|++++|+|..|...++..|++++.++.+   .+|.+|++++++.++ .++++|++++||||||.+++.+++++
T Consensus       104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~  182 (382)
T PRK06108        104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA  182 (382)
T ss_pred             hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999864   357799999999886 58999999999999999999999888


Q ss_pred             HHhC----CCeEEEccCCcCccCC-CCc----hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--C
Q 019868          243 ILEM----PILVVLDEAYTEFSGL-ESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~-~~~----~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~  311 (334)
                      |++.    ++++|+||+|.++.++ +..    .......+++++++||||.||++|+|+||+++++++++.+.+...  .
T Consensus       183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~  262 (382)
T PRK06108        183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT  262 (382)
T ss_pred             HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence            8764    8999999999998764 211    122233578999999999999999999999999999998887654  3


Q ss_pred             CCCcHHHHHHHHHHhcCc-hhh
Q 019868          312 YNVSVAAEVAACAALQNP-IYL  332 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~~-~~~  332 (334)
                      ++++.+.|.++..+|++. +++
T Consensus       263 ~~~~~~~q~a~~~~l~~~~~~~  284 (382)
T PRK06108        263 SCVAQFVQRAAVAALDEGEDFV  284 (382)
T ss_pred             cCCChHHHHHHHHHHhCChHHH
Confidence            568999999999999874 443

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-36  Score=290.04  Aligned_cols=238  Identities=26%  Similarity=0.386  Sum_probs=201.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCC-CcChHHHHHHHHHhc----CC--C-CCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp-~~g~~~lr~~lA~~~----~~--~-~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++|+.|++++++++.+.+++.+. .  ....|+ ..|.+++|+++++++    |+  + +++|++|+|+++++..++
T Consensus        27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~  106 (389)
T PRK05957         27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI  106 (389)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence            35799999999999999999988752 2  224684 558888888888765    65  3 678999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      ..++++||+|++++|+|..+...++..|++++.++.++++.+|++++++.++ +++|+|++++||||||.+++.+++++|
T Consensus       107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i  185 (389)
T PRK05957        107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV  185 (389)
T ss_pred             HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence            9899999999999999999988888899999999987788999999999997 689999999999999999998887777


Q ss_pred             HhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      ++.    ++++|+||+|.+|.++..    .....+..+++++++||||.||++|+|+||+++++++++++.+....  .+
T Consensus       186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~  265 (389)
T PRK05957        186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC  265 (389)
T ss_pred             HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence            654    899999999999986531    11222445789999999999999999999999999999999887765  46


Q ss_pred             CcHHHHHHHHHHhcCc-hhhc
Q 019868          314 VSVAAEVAACAALQNP-IYLE  333 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~-~~~~  333 (334)
                      ++.+.|.++..+|+++ +|++
T Consensus       266 ~~~~~q~~~~~~l~~~~~~~~  286 (389)
T PRK05957        266 PPVVSQYAALGALQVGKSYCQ  286 (389)
T ss_pred             CCcHHHHHHHHHHhCChHHHH
Confidence            7889999999999874 4543

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=2.1e-36  Score=291.31  Aligned_cols=243  Identities=26%  Similarity=0.385  Sum_probs=200.9

Q ss_pred             HhCCCCCCeeecCCCCC---CCCCCHHHHHHHhcC-c-CCCCCC-CcChHHHHHHHHHhc------CCCCCCEEEeCCHH
Q 019868           89 QLGRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGAD  156 (334)
Q Consensus        89 ~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~  156 (334)
                      +.+..+.++|+|+.|++   ++++++.+.+++.+. . ....|+ ..|..+||+++++++      ++++++|++|+|++
T Consensus        24 ~~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~  103 (398)
T PRK08363         24 ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT  103 (398)
T ss_pred             HHHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence            33445678999999998   788899999888762 2 235684 668999999999997      36889999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee-C-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-R-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~-~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +++..++.+++++||.|++++|+|..|...++..|++++.++ . ++++.+|++++++.++ +++++|++++||||||.+
T Consensus       104 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~  182 (398)
T PRK08363        104 EALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGAL  182 (398)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcC
Confidence            999999999999999999999999999999999999998884 3 3457899999999986 578999999999999999


Q ss_pred             CcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchheeEc--CHHHHHHHH
Q 019868          235 INDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLW  306 (334)
Q Consensus       235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~~i~~l~  306 (334)
                      ++.+++++|++.    ++++|+||+|.++.+++..  ...+...+++++++||||.|+++|+|+||+++  ++++++.+.
T Consensus       183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~  262 (398)
T PRK08363        183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVR  262 (398)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHH
Confidence            998888887764    8999999999998764422  22333456899999999999999999999997  777766655


Q ss_pred             HhcC-----CCCCcHHHHHHHHHHhcC-chhh
Q 019868          307 RAKQ-----PYNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       307 ~~~~-----~~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +...     .++++.++|.++.++|.+ .+|+
T Consensus       263 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l  294 (398)
T PRK08363        263 EAIDKLARIRLCPNTPAQFAAIAGLTGPMDYL  294 (398)
T ss_pred             HHHHHHhcccccCChHHHHHHHHHHhCChHHH
Confidence            4321     367899999999999975 4554

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-36  Score=286.32  Aligned_cols=226  Identities=27%  Similarity=0.379  Sum_probs=194.7

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      ..+++||+.|+|++++|+.+++++.+ +.....||+. |..+||+++|+++++++++|++|+|+++++..+++  +++| 
T Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-   97 (349)
T PRK07908         21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-   97 (349)
T ss_pred             CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence            45789999999999999999999876 3344678764 89999999999999999999999999999999988  4664 


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEE
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lI  251 (334)
                      .++++.|+|..+...++..|++++.++.++++.+|++.+    + .++++++++|||||||.+++.+++.++++.+.++|
T Consensus        98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI  172 (349)
T PRK07908         98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV  172 (349)
T ss_pred             eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence            567789999999999999999999999766688998854    2 46889999999999999999999999998788999


Q ss_pred             EccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868          252 LDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       252 vDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +||+|.++.... ..... ...+++++++||||.||++|+|+||+++++++++.+.+....++++++.|.++.+++++
T Consensus       173 vDe~y~~~~~~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  249 (349)
T PRK07908        173 VDEAFADAVPGE-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAP  249 (349)
T ss_pred             EECcchhhccCC-ccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcc
Confidence            999999886432 11111 24568999999999999999999999999999999998888888999999988888874

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=2e-36  Score=290.37  Aligned_cols=245  Identities=21%  Similarity=0.296  Sum_probs=205.5

Q ss_pred             HHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhcC------CCCCCEEEeCCHH
Q 019868           87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGAD  156 (334)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~  156 (334)
                      ..+....+.+.++|+.|++++.+++.+.+++.+.   .....| +..|.++||++++++++      +++++|++|+|++
T Consensus        21 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~  100 (386)
T PRK07550         21 LAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCN  100 (386)
T ss_pred             HHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcH
Confidence            3444445667899999999998888888887752   233568 56699999999999873      6789999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +++..++.+++++||+|+++.|+|..+...++..|++++.++.+  +++.+|++++++.++ .++++|++++||||||.+
T Consensus       101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~  179 (386)
T PRK07550        101 QAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVV  179 (386)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCcc
Confidence            99999999999999999999999999999999999999999964  457789999999997 578999999999999999


Q ss_pred             CcHHHHHHHHhC----CCeEEEccCCcCccCCCC-chhhh---cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ++.+++++|++.    +++||+||+|.+|.+... .....   +..+++++++||||.||++|+|+||+++++++++.+.
T Consensus       180 ~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~  259 (386)
T PRK07550        180 YPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIE  259 (386)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHH
Confidence            998888887764    999999999999875321 11121   2356899999999999999999999999999999888


Q ss_pred             HhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868          307 RAKQP--YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       307 ~~~~~--~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +....  .+++.++|.++..+|++ .+|+
T Consensus       260 ~~~~~~~~~~s~~~q~~~~~~l~~~~~~~  288 (386)
T PRK07550        260 KFMDTVAICAPRIGQIAVAWGLPNLADWR  288 (386)
T ss_pred             HHHhhcccCCCcHHHHHHHHHhccHHHHH
Confidence            87764  46789999999999987 4554

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=3.4e-36  Score=292.81  Aligned_cols=242  Identities=19%  Similarity=0.247  Sum_probs=192.1

Q ss_pred             HHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCC
Q 019868           88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS------GLESDHILVGCG  154 (334)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G  154 (334)
                      ++....+.++++++.|++   ++++|+.+.+++.+.   .....| |..|.++||+++|+++      .+++++|++|+|
T Consensus        25 ~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G  104 (433)
T PRK06855         25 KKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG  104 (433)
T ss_pred             HHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence            334344567899999998   678999988887763   233568 5679999999999987      367899999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-HHCCCeEEEeeCC--CCCCCCHHHHHHhccc-CCceEEEEeCCCCc
Q 019868          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNP  230 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NP  230 (334)
                      +++++..++. ++++||+|++++|+|+.|.... ...|++++.++.+  ++|.+|++++++.++. .+++++++++||||
T Consensus       105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NP  183 (433)
T PRK06855        105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNP  183 (433)
T ss_pred             HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCC
Confidence            9999999986 7899999999999999887553 3468998888853  4588999999999863 36799999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-c--hhhhcCCCcEEEEcCCchhhcccccchheeEcC-----
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----  298 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-----  298 (334)
                      ||.+++.+++++|++.    +++||+||+|.++.+++. .  ...+....++|+++||||.|+++|||+||++++     
T Consensus       184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~  263 (433)
T PRK06855        184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD  263 (433)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence            9999999999999864    999999999999986432 1  222222246899999999999999999999973     


Q ss_pred             H---HHHHHHHHhcC-CCCCcHHHHHHHHHHhcCch
Q 019868          299 L---SIIEYLWRAKQ-PYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       299 ~---~~i~~l~~~~~-~~~~~~~~q~aa~~~L~~~~  330 (334)
                      +   .+++.+..... ..+++.+.|.++.++|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~  299 (433)
T PRK06855        264 EVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPE  299 (433)
T ss_pred             hHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCc
Confidence            2   23344433332 24678999999999998753

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=6.4e-36  Score=286.95  Aligned_cols=237  Identities=21%  Similarity=0.320  Sum_probs=199.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-C-cCCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++++|+.|.++.+.|+.+.+++.+ + .....|++ .|.++||+++++++    |  ++++ +|++|+|+++++..++.
T Consensus        26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  105 (387)
T PRK08912         26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL  105 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence            4679999999998878888777654 2 23367865 48999999999986    3  5777 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      .++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++++++.+. .++++|++++||||||.+++.+++++|
T Consensus       106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i  184 (387)
T PRK08912        106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL  184 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence            999999999999999999999999999999999864 468999999999886 588999999999999999999998888


Q ss_pred             HhC----CCeEEEccCCcCccCCCC-c--hhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES-R--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~-~--~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      ++.    ++++|+||+|.++.+++. .  .... ...+++++++||||.||++|+|+||+++++++++.+.+....  ++
T Consensus       185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~  264 (387)
T PRK08912        185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT  264 (387)
T ss_pred             HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence            764    899999999998876431 1  1122 225789999999999999999999999999999998877654  67


Q ss_pred             CcHHHHHHHHHHhcC-chhh
Q 019868          314 VSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~-~~~~  332 (334)
                      .++..|.++.++|.+ .+|+
T Consensus       265 ~~~~~q~~~~~~l~~~~~~~  284 (387)
T PRK08912        265 TPPNLQAAVAYGLGKPDDYF  284 (387)
T ss_pred             CChHHHHHHHHHHhCCHHHH
Confidence            788888888888754 4554

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.6e-36  Score=293.18  Aligned_cols=227  Identities=26%  Similarity=0.406  Sum_probs=184.7

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI  159 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i  159 (334)
                      +.++++|+.|++++++++.+.+++.+ +.      ....| |..|.++||+++|+++      ++++++|++|+|+++++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al  112 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT  112 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence            45689999999999999988887765 21      23568 6779999999999986      67899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCe-----------EEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeC
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS  226 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~-----------v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~  226 (334)
                      .+++. ++++||+|++++|+|+.|...++..|++           ++.++.+.  ++.+|++       .+++|+|++|+
T Consensus       113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n  184 (409)
T PRK07590        113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF  184 (409)
T ss_pred             HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence            98764 6789999999999999999999999987           88888642  3444432       25789999999


Q ss_pred             CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcC-CCcEEEEcCCchhhcccccchheeEcC
Q 019868          227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       227 p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      ||||||.+++.+++++|++.    +++||+||+|.+|.+++..   ....+. .+++|+++||||.||++|+|+||++++
T Consensus       185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~  264 (409)
T PRK07590        185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP  264 (409)
T ss_pred             CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence            99999999999999999864    8999999999998864422   222222 357999999999999999999999999


Q ss_pred             HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHhcC
Q 019868          299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       299 ~~~i~~l------------~~-~~~~-~~~~~~~q~aa~~~L~~  328 (334)
                      +++++.+            .. .... .+++.++|.++.++|++
T Consensus       265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  308 (409)
T PRK07590        265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP  308 (409)
T ss_pred             HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence            9998721            11 1222 36899999999999975

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=2.4e-36  Score=287.61  Aligned_cols=239  Identities=26%  Similarity=0.406  Sum_probs=195.0

Q ss_pred             HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc----C---CCCCCEEEeCC
Q 019868           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G---LESDHILVGCG  154 (334)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~----~---~~~~~I~~t~G  154 (334)
                      +..++......+.++++|+.|++..+.++.+.+++.+.....+|++ .|.++||+++|+++    +   +++++|++|+|
T Consensus        15 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G   94 (364)
T PRK07865         15 LAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIG   94 (364)
T ss_pred             HHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccC
Confidence            3334444444556789999998777777888888876433357865 48899999999997    3   66899999999


Q ss_pred             HHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       155 ~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      +++++..++..+ +++||.|++++|+|+.|...++..|++++.++.       +++++    ..++++|++++||||||.
T Consensus        95 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~  163 (364)
T PRK07865         95 SKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGR  163 (364)
T ss_pred             hHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCc
Confidence            999999988887 799999999999999999999999999988752       23322    257899999999999999


Q ss_pred             CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh------cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~------~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +++.+++++|++.    +++||+||+|.++.+++......      ...+++++++||||.||++|+|+||+++++++++
T Consensus       164 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~  243 (364)
T PRK07865        164 VLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA  243 (364)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHH
Confidence            9999999988764    89999999999988654322211      1347899999999999999999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      .+.+.+..  ++++.+.|.++.++|++.+++
T Consensus       244 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  274 (364)
T PRK07865        244 ELLEVRKHAGMMVPAPVQAAMVAALGDDAHV  274 (364)
T ss_pred             HHHHHHHhcCCCcCHHHHHHHHHHhCCHHHH
Confidence            98876643  678999999999999986654

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5e-36  Score=288.12  Aligned_cols=235  Identities=25%  Similarity=0.429  Sum_probs=201.0

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|.++||+++|+++      ++++++|++|+|+++++..++..
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~  112 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES  112 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence            46899999999999889888888763 2 22457 7779999999999987      46789999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      ++++||+|++++|+|..+...++..|++++.++.+.  +|.+|++++++.++ .+++++++++||||||.+++.+++++|
T Consensus       113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l  191 (391)
T PRK08361        113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI  191 (391)
T ss_pred             hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence            999999999999999999999999999999998643  57899999999997 578999999999999999998887777


Q ss_pred             HhC----CCeEEEccCCcCccCCC-Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCc
Q 019868          244 LEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS  315 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~-~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~  315 (334)
                      ++.    ++++|+||+|.+|.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+.+....  ++++
T Consensus       192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
T PRK08361        192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA  271 (391)
T ss_pred             HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence            653    89999999999987532 2222221 34789999999999999999999999999999988776543  6889


Q ss_pred             HHHHHHHHHHhcCch
Q 019868          316 VAAEVAACAALQNPI  330 (334)
Q Consensus       316 ~~~q~aa~~~L~~~~  330 (334)
                      .+.|.++..+|++++
T Consensus       272 ~~~q~~~~~~l~~~~  286 (391)
T PRK08361        272 SFVQIAGIEALRSKE  286 (391)
T ss_pred             hHHHHHHHHHhcCCc
Confidence            999999999998864

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=7.1e-36  Score=286.71  Aligned_cols=234  Identities=26%  Similarity=0.432  Sum_probs=199.9

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCC-CCcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      +.+|+|+.|.+.+++++.+.+++.+. . ....| |..|..+||+++|+++    |  ++++ +|++|+|+++++.+++.
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~  107 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR  107 (387)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            46799999999888888888888763 2 33568 4678999999999987    4  4777 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      .++++||+|++++|+|..|...++..|++++.++.+ +++.+|.+++++.++ .+++++++++||||||.+++.+++++|
T Consensus       108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l  186 (387)
T PRK07683        108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI  186 (387)
T ss_pred             HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999864 567789999999886 578999999999999999999999888


Q ss_pred             HhC----CCeEEEccCCcCccCCCCchh---hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV  314 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~  314 (334)
                      ++.    ++++|+||+|.++.+.+....   ..+..+++++++||||.||++|+|+||+++++++++.+.+....  .++
T Consensus       187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~  266 (387)
T PRK07683        187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA  266 (387)
T ss_pred             HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence            774    899999999999876432222   22345789999999999999999999999999999998876543  456


Q ss_pred             cHHHHHHHHHHhcCc
Q 019868          315 SVAAEVAACAALQNP  329 (334)
Q Consensus       315 ~~~~q~aa~~~L~~~  329 (334)
                      +.++|.++..+|+++
T Consensus       267 ~~~~q~~~~~~l~~~  281 (387)
T PRK07683        267 SSISQYAALEALTAG  281 (387)
T ss_pred             ChHHHHHHHHHHhCC
Confidence            889999999999764

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=6.1e-36  Score=287.03  Aligned_cols=237  Identities=24%  Similarity=0.418  Sum_probs=201.8

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCC-CcChHHHHHHHHHhc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp-~~g~~~lr~~lA~~~----~~--~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+. . ....|+ ..|.++||+++++++    ++  +++ +|++|+|+++++..++.
T Consensus        30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~  109 (386)
T PRK09082         30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL  109 (386)
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence            46799999999999888888888763 2 235684 558999999999864    54  344 89999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      .++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus       110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i  188 (386)
T PRK09082        110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL  188 (386)
T ss_pred             HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999964 468999999999997 579999999999999999999999888


Q ss_pred             HhC----CCeEEEccCCcCccCCCC---ch-hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES---RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~---~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~  313 (334)
                      ++.    ++++|+||+|.++.+++.   .. ......+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~  268 (386)
T PRK09082        189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT  268 (386)
T ss_pred             HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence            764    899999999999886432   11 12223579999999999999999999999999999999988774  478


Q ss_pred             CcHHHHHHHHHHhc-Cchhh
Q 019868          314 VSVAAEVAACAALQ-NPIYL  332 (334)
Q Consensus       314 ~~~~~q~aa~~~L~-~~~~~  332 (334)
                      ++.+.|.++..+|+ +++++
T Consensus       269 ~~~~~q~~~~~~l~~~~~~~  288 (386)
T PRK09082        269 VNTPAQLALADYLRAEPEHY  288 (386)
T ss_pred             CChHHHHHHHHHHhCChHHH
Confidence            99999999999997 55554

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-35  Score=286.13  Aligned_cols=235  Identities=26%  Similarity=0.368  Sum_probs=198.1

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCC-CcChHHHHHHHHHhc-----CCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYP-DPESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp-~~g~~~lr~~lA~~~-----~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      +.++++|+.|++++++++.+.+++.+. .....|+ ..|.+++|+++++++     ++++++|++|+|+++++..++..+
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l  108 (397)
T PRK07568         29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI  108 (397)
T ss_pred             CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence            356899999999999999999988763 3345685 458999999999997     578899999999999999999999


Q ss_pred             cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCC-CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFS-LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~-~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++||+|++++|+|..|...++..|++++.++.+  +++. .|+++++++++ +++++|++++||||||.+++.+++++|
T Consensus       109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i  187 (397)
T PRK07568        109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML  187 (397)
T ss_pred             cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence            9999999999999999998888999999999863  3344 36899999886 688999999999999999999888888


Q ss_pred             HhC----CCeEEEccCCcCccCCCC-c--hhhhc-CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC-CC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES-R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-YN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~-~--~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~-~~  313 (334)
                      ++.    ++++|+||+|.+|.+++. .  ..... ..+++++++||||.||++|+|+||++++ +++++.+.+.... ++
T Consensus       188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~  267 (397)
T PRK07568        188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS  267 (397)
T ss_pred             HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence            764    899999999999976432 1  11222 3679999999999999999999999984 7888877665543 78


Q ss_pred             CcHHHHHHHHHHhcCc
Q 019868          314 VSVAAEVAACAALQNP  329 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~  329 (334)
                      ++.+.|.++..+|++.
T Consensus       268 ~s~~~q~~~~~~l~~~  283 (397)
T PRK07568        268 PPTLEQIGAAALLDTP  283 (397)
T ss_pred             CCcHHHHHHHHHhhCC
Confidence            8999999999999863

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=3.7e-36  Score=285.64  Aligned_cols=239  Identities=26%  Similarity=0.394  Sum_probs=196.6

Q ss_pred             HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCc-ChHHHHHHHHHhc-------CCCCCCEEEeCC
Q 019868           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG  154 (334)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~-g~~~lr~~lA~~~-------~~~~~~I~~t~G  154 (334)
                      +-.++.+....+.++++|+.|++..++++.+.+++++......|+++ |.++||+++++++       ++++++|++|+|
T Consensus         9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G   88 (357)
T TIGR03539         9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG   88 (357)
T ss_pred             HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence            33445555556678899999988888888888888764344678654 7899999999987       477899999999


Q ss_pred             HHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       155 ~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      +++++..++..+ +++||.|++++|+|+.|...++..|++++.++       |++.+    ...++++|++++|+||||.
T Consensus        89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~  157 (357)
T TIGR03539        89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR  157 (357)
T ss_pred             hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence            999999998877 69999999999999999999999999988874       22322    2257899999999999999


Q ss_pred             CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhc------CCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +++.+++++|++.    ++++|+||+|.+|.+.+.....+.      ..+++++++||||.|+++|+|+||+++++++++
T Consensus       158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~  237 (357)
T TIGR03539       158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA  237 (357)
T ss_pred             cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence            9999998888764    899999999998876443222221      346899999999999999999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      .+.+.+..  ++++.++|.++.++|++..++
T Consensus       238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  268 (357)
T TIGR03539       238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHV  268 (357)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHcCCHHHH
Confidence            88877643  678999999999999885544

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=1.5e-35  Score=284.74  Aligned_cols=236  Identities=28%  Similarity=0.413  Sum_probs=199.6

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc----CC--C-CCCEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~----~~--~-~~~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+ +. ....| |..|.++||+++++++    ++  + +++|++|+|+++++.+++.
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~  109 (391)
T PRK07309         30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT  109 (391)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            4689999999999999988888775 32 22468 5568999999999987    33  3 4789999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      .++++||+|++++|+|..|...++..|++++.++.+. ++.+|++.+++++++  +++++|++++||||||.+++.++++
T Consensus       110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~  189 (391)
T PRK07309        110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK  189 (391)
T ss_pred             HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence            9999999999999999999999999999999998643 578999999998863  3689999999999999999988888


Q ss_pred             HHHhC----CCeEEEccCCcCccCCC-Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          242 KILEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      +|++.    ++++|+||+|.++.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+.+....  .+
T Consensus       190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~  269 (391)
T PRK07309        190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA  269 (391)
T ss_pred             HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence            88764    99999999999998643 2222211 34789999999999999999999999999999998876543  56


Q ss_pred             CcHHHHHHHHHHhcCch
Q 019868          314 VSVAAEVAACAALQNPI  330 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~~  330 (334)
                      ++.++|.++..+|++..
T Consensus       270 ~~~~~q~~~~~~l~~~~  286 (391)
T PRK07309        270 ATTMAQFAAVEALTNGK  286 (391)
T ss_pred             CChHHHHHHHHHHhCCh
Confidence            89999999999998753

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.1e-36  Score=288.24  Aligned_cols=237  Identities=18%  Similarity=0.197  Sum_probs=186.3

Q ss_pred             CCeeecCCCCC-CCCCCH----HHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc---C---CCCCCEE--EeCCHHH
Q 019868           95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIY-PDPESRRLRAALAKDS---G---LESDHIL--VGCGADE  157 (334)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~---~---~~~~~I~--~t~G~~~  157 (334)
                      +++++|+.|.+ +++++.    .+.+++...   ....+| |..|.++||+++|+++   +   +++++|+  .|.|+++
T Consensus        29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~  108 (404)
T PTZ00376         29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG  108 (404)
T ss_pred             cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence            57799999986 355443    344454332   123678 5669999999999986   2   4778998  4889999


Q ss_pred             HHHHHHH---HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-C-CCCCCCHHHHHHhccc--CCceEEEEeCCCCc
Q 019868          158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (334)
Q Consensus       158 ~i~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~-~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NP  230 (334)
                      ++..++.   .++++||+|++++|+|+.|...++..|++++.++. + +++++|++.+++.+++  ++++++++++||||
T Consensus       109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP  188 (404)
T PTZ00376        109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP  188 (404)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9888864   56899999999999999999999999999999996 2 4589999999998853  34577778999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---Cc--hhh-hcCCCcEEEEcCCchhhcccccchhee---Ec
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---SR--MEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF  297 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~~--~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l---~~  297 (334)
                      ||.+++.+++++|++.    +++||+||+|.+|.+++   ..  ... ....+++++++||||.|+++|||+||+   ++
T Consensus       189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~  268 (404)
T PTZ00376        189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA  268 (404)
T ss_pred             CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence            9999999999999874    89999999999998743   11  111 223468999999999999999999999   56


Q ss_pred             CHHHHHH----HHHhc-CCC-CCcHHHHHHHHHHhcCchh
Q 019868          298 PLSIIEY----LWRAK-QPY-NVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       298 ~~~~i~~----l~~~~-~~~-~~~~~~q~aa~~~L~~~~~  331 (334)
                      ++++++.    +.+.. ..+ +.+.++|.++..+|++++|
T Consensus       269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  308 (404)
T PTZ00376        269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPEL  308 (404)
T ss_pred             CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHH
Confidence            8775554    33332 233 5688999999999998643

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.9e-35  Score=285.13  Aligned_cols=239  Identities=24%  Similarity=0.364  Sum_probs=201.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCCC-cChHHHHHHHHHhc----CC--CCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp~-~g~~~lr~~lA~~~----~~--~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+.++++|+.|.+++++++.+.+++.+. . ...+|++ .|.++||+++++++    |+  ++++|++|+|+++++..++
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~  110 (402)
T PRK06107         31 AGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL  110 (402)
T ss_pred             ccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence            3567899999999999889888887763 2 3356855 58999999999875    44  6889999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      .+++++||+|++++|+|..|...+...|.+++.++.+  ++|.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus       111 ~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~  189 (402)
T PRK06107        111 MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELR  189 (402)
T ss_pred             HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHH
Confidence            9999999999999999999998888889988888753  457899999999986 6889999999999999999999998


Q ss_pred             HHHhC-----CCeEEEccCCcCccCCCCc-h--hhh-c-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          242 KILEM-----PILVVLDEAYTEFSGLESR-M--EWV-K-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       242 ~l~~~-----~~~lIvDeay~~~~~~~~~-~--~~~-~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      ++++.     ++++|+||+|.++.+.+.. .  ... . ..+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus       190 ~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~  269 (402)
T PRK06107        190 ALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQ  269 (402)
T ss_pred             HHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHh
Confidence            88763     6899999999988754321 1  111 1 24689999999999999999999999999999999888764


Q ss_pred             --CCCcHHHHHHHHHHhcC-chhh
Q 019868          312 --YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       312 --~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                        ++++.+.|.++..+|++ ..|+
T Consensus       270 ~~~~~s~~~q~~~~~~l~~~~~~~  293 (402)
T PRK06107        270 SSSCPSSISQAAAAAALNGDQSFV  293 (402)
T ss_pred             cccCCChHHHHHHHHHhcCChHHH
Confidence              67999999999999974 4443

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-35  Score=284.53  Aligned_cols=258  Identities=27%  Similarity=0.425  Sum_probs=211.4

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc--
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS--  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~--  142 (334)
                      ++++..+.++. +..+...+.+....+.++++|+.|++++++++.+.+++.+ +. ....| +..|..+||+++|+++  
T Consensus         5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~   83 (393)
T PRK05764          5 SKRVSRVTPSA-TLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKR   83 (393)
T ss_pred             hhhhhhcCchH-HHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHH
Confidence            44454444442 2333334444444456789999999999988999888775 32 33458 4568999999999987  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc
Q 019868          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER  216 (334)
Q Consensus       143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~  216 (334)
                          ++++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+  +++.+|++++++.++ 
T Consensus        84 ~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-  162 (393)
T PRK05764         84 DNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-  162 (393)
T ss_pred             HhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-
Confidence                4678899999999999999999999999999999999999999999999999999964  457899999999986 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhh--hcCCCcEEEEcCCchhhcc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~gl  287 (334)
                      +++++|++++||||||.+++.+++++|++.    ++++|+||+|.++.+++.   ....  .+..+++++++||||.||+
T Consensus       163 ~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~  242 (393)
T PRK05764        163 PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAM  242 (393)
T ss_pred             ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccC
Confidence            688999999999999999998888888764    899999999999876432   1222  2335789999999999999


Q ss_pred             cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          288 AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +|+|+||+++++++++.+.+....  ++++.++|.++..+|+
T Consensus       243 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  284 (393)
T PRK05764        243 TGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALN  284 (393)
T ss_pred             ccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence            999999999999999999877654  5789999999999997

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=7e-36  Score=290.96  Aligned_cols=239  Identities=22%  Similarity=0.316  Sum_probs=195.2

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhcC-c-------------CCCCCCC-cChHHHHHHHHHhcC--------CCCCCE
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPD-PESRRLRAALAKDSG--------LESDHI  149 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Yp~-~g~~~lr~~lA~~~~--------~~~~~I  149 (334)
                      .+..+|+|++.||.+-- +.+.+.++.. .             ....|.+ .|.++||+++|++++        +++++|
T Consensus        45 np~g~i~l~~aeN~l~~-d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I  123 (447)
T PLN02607         45 NPSGVIQMGLAENQVSF-DLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI  123 (447)
T ss_pred             CCCceEEEechhhhhhH-HHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence            45679999999997642 4445544431 1             1133644 489999999999872        688999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceE
Q 019868          150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC  221 (334)
Q Consensus       150 ~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~  221 (334)
                      ++|+|+++++.+++.++++|||.|+++.|+|+.|...+. ..|+++++|+.+  ++|.+|++++++++++     .++|+
T Consensus       124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~  203 (447)
T PLN02607        124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG  203 (447)
T ss_pred             EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence            999999999999999999999999999999999988776 479999999854  4578999999998863     47899


Q ss_pred             EEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC----chhhh------cCCCcEEEEcCCchhhcc
Q 019868          222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWV------KKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       222 i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~------~~~~~~i~i~S~SK~~gl  287 (334)
                      |+++|||||||.+++.+++++|++.    ++++|+||+|.++.++..    .....      +..+++++++||||.||+
T Consensus       204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~  283 (447)
T PLN02607        204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL  283 (447)
T ss_pred             EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence            9999999999999999999998875    899999999998765432    11111      115789999999999999


Q ss_pred             cccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       288 ~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +|+|+||+++ ++++++.+.+......+|.++|.++..+|+|++|.
T Consensus       284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~  329 (447)
T PLN02607        284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFT  329 (447)
T ss_pred             CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhH
Confidence            9999999998 77888888777655578999999999999998765

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=6.7e-36  Score=288.25  Aligned_cols=231  Identities=23%  Similarity=0.375  Sum_probs=186.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCC-CCcChHHHHHHHHHhc---CCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~lA~~~---~~~~~~I~~t~G~~~~i~~~  162 (334)
                      +.++++|+.|++++++++.+.+++.+ +.      ....| |..|.++||+++|+++   ++++++|++|+|+++++..+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l  111 (402)
T TIGR03542        32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL  111 (402)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence            46789999999999999988887764 21      12458 7779999999999986   78999999999999999987


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCC-----------eEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~-----------~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      +. ++.+||+|++++|+|..|...++..|+           +++.++.+  +++.+|++.      ..++++|+++||||
T Consensus       112 ~~-l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N  184 (402)
T TIGR03542       112 QS-LFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN  184 (402)
T ss_pred             HH-hcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence            54 678999999999999999999999999           99988854  245555321      14789999999999


Q ss_pred             ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcC-CCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      |||.+++.+++++|++.    +++||+||+|.+|.+++..   ....+. .+++++++||||.||++|+|+||+++++++
T Consensus       185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l  264 (402)
T TIGR03542       185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL  264 (402)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence            99999999999998874    8999999999999864421   112222 468999999999999999999999999987


Q ss_pred             H--------HHHHH-hcCC-CCCcHHHHHHHHHHhcCchh
Q 019868          302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       302 i--------~~l~~-~~~~-~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +        +.+.+ .... .+++.++|.++..+|++..+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~  304 (402)
T TIGR03542       265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL  304 (402)
T ss_pred             hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch
Confidence            7        22222 2222 46899999999999987543

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=2.3e-35  Score=277.36  Aligned_cols=238  Identities=33%  Similarity=0.478  Sum_probs=204.2

Q ss_pred             CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHH
Q 019868           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI  159 (334)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i  159 (334)
                      +.+++..++++|.+++++++|+.|+|++++|  ..+.  ......+||++..+++|+++++++++++++|++|+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140         2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPI--PASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI   77 (330)
T ss_pred             CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhc--chHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence            5678888999999888999999999999876  2111  11223668877669999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ..+... +.+| .|++++|+|..|...++..|++++.++       |++++++.++  +++++++++||||||.+++.++
T Consensus        78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~  146 (330)
T TIGR01140        78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET  146 (330)
T ss_pred             HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence            998775 5777 699999999999999999999999987       7899998884  5789999999999999999999


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCc
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS  315 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~  315 (334)
                      +++|++.    ++++|+||+|.++....+.....+..+++++++||||.||++|+|+||+++++++++.+......++++
T Consensus       147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s  226 (330)
T TIGR01140       147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN  226 (330)
T ss_pred             HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence            9988764    899999999998886433333333468899999999999999999999999999999999888788999


Q ss_pred             HHHHHHHHHHhcCchhh
Q 019868          316 VAAEVAACAALQNPIYL  332 (334)
Q Consensus       316 ~~~q~aa~~~L~~~~~~  332 (334)
                      .++|.++..++++++|.
T Consensus       227 ~~~q~~~~~~l~~~~~~  243 (330)
T TIGR01140       227 GPARAAGRAALADTAWQ  243 (330)
T ss_pred             HHHHHHHHHHHhchHHH
Confidence            99999999999988774

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=2.3e-35  Score=275.14  Aligned_cols=215  Identities=27%  Similarity=0.418  Sum_probs=182.9

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      .+.++|+|+.|+|+++ |+.+.+++.+ ......||.  ...+|++++++++   ++|++|+|+++++..++. ++.+||
T Consensus         6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~-~~~~gd   78 (311)
T PRK08354          6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGI-LALRDR   78 (311)
T ss_pred             CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH-hhCCCC
Confidence            4567899999999996 5788888865 333356875  5789999999998   479999999999998886 445899


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~  247 (334)
                      +|++++|+|+.|...++..|++++.++      +|++.+++.++  +++++++++||||||.+++.+++++|++.    +
T Consensus        79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~  150 (311)
T PRK08354         79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN  150 (311)
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence            999999999999999999999997753      57899988875  56789999999999999999999999875    8


Q ss_pred             CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +++|+||+|.+|.+++...    ..+++++++||||.||++|+|+||+++   .++.+.+.+.++.++.+++.++.++++
T Consensus       151 ~~li~De~y~~f~~~~~~~----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~  223 (311)
T PRK08354        151 ALLILDEAFIDFVKKPESP----EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE  223 (311)
T ss_pred             cEEEEeCcchhcccccccc----CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence            9999999999998754221    267999999999999999999999998   667777778888899999999988887


Q ss_pred             Cc
Q 019868          328 NP  329 (334)
Q Consensus       328 ~~  329 (334)
                      +.
T Consensus       224 ~~  225 (311)
T PRK08354        224 DD  225 (311)
T ss_pred             hH
Confidence            53

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-35  Score=291.61  Aligned_cols=202  Identities=23%  Similarity=0.305  Sum_probs=166.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc------C-C-C--CCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~------~-~-~--~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++|+|+.|++++++|+.+.++...+. +..||. .|..++|+++++++      + . .  .++|++|+|+++++..++.
T Consensus       101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~  179 (527)
T PRK09275        101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD  179 (527)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            56999999999999988888665543 245965 58999999999843      1 1 2  2489999999999999988


Q ss_pred             H-----hcCCCCEEEEcCCCChhHHHHHHHCC--CeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~G--~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      +     +++|||+|++++|+|+.|...++..|  ++++.++.  +++|.+|+++++++++ +++|+|+|+|||||||.++
T Consensus       180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~  258 (527)
T PRK09275        180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM  258 (527)
T ss_pred             HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence            6     68999999999999999999888765  55566653  3568999999999886 7899999999999999999


Q ss_pred             cHHHHHHHHhC------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       236 ~~~~l~~l~~~------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +.+++++|++.      +++||+||+|.+|.+........ ..+++++++||||.||++|||+||++++++
T Consensus       259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~  328 (527)
T PRK09275        259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHED  328 (527)
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence            99999888642      79999999999987532211111 347999999999999999999999999876

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=3.9e-35  Score=282.39  Aligned_cols=236  Identities=19%  Similarity=0.224  Sum_probs=186.0

Q ss_pred             CCeeecCCCC---CCCCCC--HHHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhc---C---CCCCCE--EEeCCHHH
Q 019868           95 EDIVKIDANE---NPYGPP--PEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHI--LVGCGADE  157 (334)
Q Consensus        95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~---~---~~~~~I--~~t~G~~~  157 (334)
                      .++|+|+.|.   +++.+|  +.+.+++.+. .  ....| |..|.++||+++++++   +   +++++|  ++|+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~  105 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG  105 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence            4679999995   334444  6788887763 2  23468 5569999999999986   2   368887  99999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCCcc
Q 019868          158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD  231 (334)
Q Consensus       158 ~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPt  231 (334)
                      ++..+++.+  ++|||+|++++|+|+.|...++..|++++.++.  .+++++|++.+++.++.  .+.+++++++|||||
T Consensus       106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT  185 (396)
T PRK09257        106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT  185 (396)
T ss_pred             HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999998766  489999999999999999999999999999985  35689999999998753  234566668999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCC-CC-ch--hh-hcCCCcEEEEcCCchhhcccccchheeEc---CH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGL-ES-RM--EW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL  299 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~-~~-~~--~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~---~~  299 (334)
                      |.+++.+++++|++.    ++++|+||+|.+|.++ +. ..  .. ....+++++++||||.|+++|+|+||+++   ++
T Consensus       186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~  265 (396)
T PRK09257        186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA  265 (396)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence            999999999999875    8999999999999864 11 11  11 22357899999999999999999999973   44


Q ss_pred             H----HHHHHHHhcC-C-CCCcHHHHHHHHHHhcCch
Q 019868          300 S----IIEYLWRAKQ-P-YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       300 ~----~i~~l~~~~~-~-~~~~~~~q~aa~~~L~~~~  330 (334)
                      +    +++.+.+... . ++++.+.|.++.++|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~  302 (396)
T PRK09257        266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPE  302 (396)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHH
Confidence            4    3344433322 2 4578999999999998864

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-34  Score=276.72  Aligned_cols=233  Identities=30%  Similarity=0.459  Sum_probs=200.4

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP  169 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~  169 (334)
                      +.++|+|+.|++++++++.+.+++.+. .  ....|+++ |..+||+++|+++++++++|++|+|+++++..++.+++.+
T Consensus        27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~  106 (380)
T PRK06225         27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP  106 (380)
T ss_pred             cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence            356899999999999999999988763 2  23567554 7899999999999999999999999999999999999999


Q ss_pred             CCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      ||+|++++|+|..+...++..|++++.++.+   +++.+|++.+++.++ +++++|++++||||||.+++.+++++|++.
T Consensus       107 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~  185 (380)
T PRK06225        107 GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEI  185 (380)
T ss_pred             CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence            9999999999999988889999999999852   257899999999987 679999999999999999998888888764


Q ss_pred             ----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC-CCCCcHHHHHH
Q 019868          247 ----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVA  321 (334)
Q Consensus       247 ----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~-~~~~~~~~q~a  321 (334)
                          ++++|+||+|.+|..+....... ..+++++++||||.||++|+|+||+++++++++.+..... .++.+.++|.+
T Consensus       186 a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~  264 (380)
T PRK06225        186 ARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEA  264 (380)
T ss_pred             HHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHH
Confidence                89999999998876533222211 3478999999999999999999999999999999887653 47889999999


Q ss_pred             HHHHhcC
Q 019868          322 ACAALQN  328 (334)
Q Consensus       322 a~~~L~~  328 (334)
                      +.++|+.
T Consensus       265 a~~~l~~  271 (380)
T PRK06225        265 AIAGLKV  271 (380)
T ss_pred             HHHHHhc
Confidence            9888865

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=8.9e-35  Score=280.52  Aligned_cols=235  Identities=23%  Similarity=0.346  Sum_probs=195.0

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhcC------CCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~  158 (334)
                      ++.++++|+.|++.    +++++.+.+++.+ +.  ....| +..|..++|++++++++      +++++|++|+|++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a  108 (403)
T TIGR01265        29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA  108 (403)
T ss_pred             cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence            45789999999874    6788888888875 32  22568 66689999999999986      367899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      +.+++.+++++||+|++++|+|..|...++..|++++.++.  ++++.+|++.+++.+. .+++++++++||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~  187 (403)
T TIGR01265       109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS  187 (403)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence            99999999999999999999999999999999999999875  3467899999999886 57899999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC--HH-----HH
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II  302 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--~~-----~i  302 (334)
                      .+++++|++.    ++++|+||+|.+|.+++.   ....+....++++++||||.|+++|+|+||++++  ++     ++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~  267 (403)
T TIGR01265       188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL  267 (403)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence            8888887764    999999999999986532   2222333457999999999999999999999983  22     45


Q ss_pred             HHHHHhcC-CCCCcHHHHHHHHHHhcC
Q 019868          303 EYLWRAKQ-PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       303 ~~l~~~~~-~~~~~~~~q~aa~~~L~~  328 (334)
                      +.+.+... .++++.++|.++.++|++
T Consensus       268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  294 (403)
T TIGR01265       268 QGLKNLLQRILGPATIVQGALPDILEN  294 (403)
T ss_pred             HHHHHHhhhhcCCChHHHHHHHHHHHh
Confidence            55555543 367899999999999975

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.8e-34  Score=279.89  Aligned_cols=236  Identities=19%  Similarity=0.228  Sum_probs=174.3

Q ss_pred             CCCeeecCCCC-CCCCCCH----HHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhc-CCC-----CCC-----EEEeC
Q 019868           94 PEDIVKIDANE-NPYGPPP----EVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDH-----ILVGC  153 (334)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~----~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~-~~~-----~~~-----I~~t~  153 (334)
                      ....++|+.+. ++...+|    .+.++...+ .  ....| |..|.++||+++++++ +..     +++     |+.++
T Consensus        47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~  126 (423)
T PLN02397         47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT  126 (423)
T ss_pred             CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence            34568888885 3433333    455554332 2  23468 6679999999999987 221     123     33455


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCC
Q 019868          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN  229 (334)
Q Consensus       154 G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~N  229 (334)
                      |+.+.+..++ .++.|||+|++++|+|+.|...++..|++++.++.  .+++++|++.+++.+.+  .+++++++++|||
T Consensus       127 Ga~~l~~~~~-~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N  205 (423)
T PLN02397        127 GSLRLGAEFL-ARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN  205 (423)
T ss_pred             HHHHHHHHHH-HHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            5544333333 35579999999999999999999999999999985  34589999988887752  4678888899999


Q ss_pred             ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---C--chhhh-cCCCcEEEEcCCchhhcccccchheeE--c
Q 019868          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F  297 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~--~  297 (334)
                      |||.+++.+++++|++.    +++||+||+|.+|.+++   .  ..... ...+++++++||||+|+++|||+||++  +
T Consensus       206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~  285 (423)
T PLN02397        206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC  285 (423)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence            99999999999999874    89999999999998743   1  11122 234679999999999999999999985  4


Q ss_pred             -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       298 -~~~~i~----~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                       ++++++    .+.+....  ++++.++|.++..+|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~  325 (423)
T PLN02397        286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE  325 (423)
T ss_pred             CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence             555544    44444432  4678899999999999864

>PLN02231 alanine transaminase

Probab=100.00  E-value=3.1e-34  Score=284.24  Aligned_cols=232  Identities=19%  Similarity=0.355  Sum_probs=185.7

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCc-----CCCCC-CCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ++|+|..+.+.|+. ..+.++...+.     ....| +..|.++||+++|+++    |  +++++|++|+|+++++..++
T Consensus       130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~  208 (534)
T PLN02231        130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM  208 (534)
T ss_pred             ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence            45666655555554 33333332221     23568 5669999999999987    3  57899999999999999999


Q ss_pred             HHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCC
Q 019868          164 RCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       164 ~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~  235 (334)
                      +.++ .+||.|+++.|+|+.|...++..|++++.++.+  ++|++|++++++.++.     .++|+|+++|||||||.++
T Consensus       209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl  288 (534)
T PLN02231        209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL  288 (534)
T ss_pred             HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence            9988 479999999999999999999999999999864  3589999999998863     1689999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCC-C-Cc--hhhhc-------CCCcEEEEcCCchhh-cccccchheeEc--
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGL-E-SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF--  297 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~-~-~~--~~~~~-------~~~~~i~i~S~SK~~-gl~G~R~G~l~~--  297 (334)
                      +.+++++|+++    +++||+||+|.++.++ + ..  ...+.       ...++++++||||.| |++|+|+||+++  
T Consensus       289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~  368 (534)
T PLN02231        289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG  368 (534)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence            99999999875    9999999999999873 2 21  11111       123699999999975 899999999986  


Q ss_pred             -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868          298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN  328 (334)
Q Consensus       298 -~~~~i~~l~~~~~~-~~~~~~~q~aa~~~L~~  328 (334)
                       ++++++.+.+.... .+.+.+.|.++..++++
T Consensus       369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~  401 (534)
T PLN02231        369 FTSDVREQIYKVASVNLCSNISGQILASLVMSP  401 (534)
T ss_pred             CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCC
Confidence             68999988877653 46688999999999975

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=6.1e-34  Score=274.00  Aligned_cols=236  Identities=27%  Similarity=0.352  Sum_probs=193.5

Q ss_pred             CCCCCeeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHH
Q 019868           92 RKPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELID  160 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~  160 (334)
                      ..+.++++|+.|.++..+++.+.+++.+ .  .....|++ .|.++||+++++++    |  ++++ +|++|+|+++++.
T Consensus        26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~  105 (395)
T PRK08175         26 RRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA  105 (395)
T ss_pred             hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH
Confidence            3456789999998888777777666554 2  23367854 58999999999986    3  4666 8999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHH
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .++..++++||+|++++|+|+.+...++..|++++.++.+++ ..+.++++++++.  .++++|++++||||||.+++.+
T Consensus       106 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~  184 (395)
T PRK08175        106 HLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELE  184 (395)
T ss_pred             HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999888899999999986543 3347888887753  3789999999999999999998


Q ss_pred             HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      ++++|++.    ++++|+||+|.++.+++...   .... ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus       185 ~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~  264 (395)
T PRK08175        185 FFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKS  264 (395)
T ss_pred             HHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHh
Confidence            88888764    89999999999988643221   1122 2467899999999999999999999999999999988775


Q ss_pred             C--CCCcHHHHHHHHHHhcC
Q 019868          311 P--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       311 ~--~~~~~~~q~aa~~~L~~  328 (334)
                      .  ++++.+.|.++..+|++
T Consensus       265 ~~~~~~~~~~q~~~~~~l~~  284 (395)
T PRK08175        265 YHDYGTFTPLQVAAIAALEG  284 (395)
T ss_pred             hcccCCCcHHHHHHHHHHhC
Confidence            3  67788899999999975

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=6.2e-35  Score=277.22  Aligned_cols=235  Identities=34%  Similarity=0.554  Sum_probs=202.2

Q ss_pred             CeeecCCCCCCCC----CCHHHHHHHhc----CcCCCCCCCc-ChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHH
Q 019868           96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI  159 (334)
Q Consensus        96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~Yp~~-g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i  159 (334)
                      ++|+|+.|+++..    +++++.+++.+    ......|++. |.++||+++|++++      ++++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5899999999887    55666655543    2344788654 79999999999997      7888 999999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccC-----CceEEEEeCCCCcc
Q 019868          160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD  231 (334)
Q Consensus       160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPt  231 (334)
                      ..++..+ .++||+|++++|+|+.|...++..|++++.++.  ++++.+|++++++.+++.     ++++|++++|||||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999988 789999999999999999999999999999993  467899999999998742     57899999999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc----hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      |.+++.+++++|++.    ++++|+||+|.++.++...    ...+....++++++||||.||++|+|+||+++++++++
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~  241 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE  241 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence            999999999999654    9999999999999976432    34455666799999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868          304 YLWRAKQPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       304 ~l~~~~~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      .+.+....+..+.+.|.++.++|.+..
T Consensus       242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~  268 (363)
T PF00155_consen  242 RLRRFQRSGLSSSPMQAAAAAALSDPE  268 (363)
T ss_dssp             HHHHHHHHTTSSHHHHHHHHHHHHHHH
T ss_pred             hhhhccccccccchhhHHHHHhhhccc
Confidence            999988887779999999999998865

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=6.3e-34  Score=273.12  Aligned_cols=237  Identities=27%  Similarity=0.448  Sum_probs=196.1

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~~--~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++++|+.|.++.+.++.+.+++.+ +. ....|++ .|..+||+++++++    ++  +++ +|++|+|+++++..++.
T Consensus        24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  103 (387)
T PRK07777         24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL  103 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence            3679999999988877777776655 22 2356854 58999999999873    54  455 79999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC---CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      .++++||+|+++.|+|..|...++..|++++.++.++   +|.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus       104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~  182 (387)
T PRK07777        104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA  182 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence            9999999999999999999999999999999988532   46799999999886 5789999999999999999988888


Q ss_pred             HHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--C
Q 019868          242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~  311 (334)
                      +|++.    ++++|+||+|.++.+.+.   ...... ..+++++++||||.||++|+|+||+++++++++.+.+...  .
T Consensus       183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~  262 (387)
T PRK07777        183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT  262 (387)
T ss_pred             HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence            88764    899999999999886432   122222 2568999999999999999999999999999998887765  3


Q ss_pred             CCCcHHHHHHHHHHhcC-chhh
Q 019868          312 YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      ++.+.+.|.++..+|.+ ..|+
T Consensus       263 ~~~~~~~q~~~~~~l~~~~~~~  284 (387)
T PRK07777        263 YVGGAPFQPAVAHALDHEDAWV  284 (387)
T ss_pred             cCCCCHHHHHHHHHHhCCcHHH
Confidence            66788899998888875 3443

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-33  Score=270.69  Aligned_cols=234  Identities=29%  Similarity=0.491  Sum_probs=194.8

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c----CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLI  162 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .++++|+.|.+++++++.+.+++.+. .    ...+| +..|..++|+++++++      ++++++|++|+|+++++..+
T Consensus        33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~  112 (394)
T PRK06836         33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA  112 (394)
T ss_pred             CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence            46799999988888888888887652 1    13668 5668999999999987      36789999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      +..++++||.|++++|+|..|...++..|++++.++.+++ +++|+++++++++ +++++|++++||||||.+++.++++
T Consensus       113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~  191 (394)
T PRK06836        113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK  191 (394)
T ss_pred             HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence            9999999999999999999999999999999999996544 7899999999996 6899999999999999999999998


Q ss_pred             HHHhC----------CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH------
Q 019868          242 KILEM----------PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------  304 (334)
Q Consensus       242 ~l~~~----------~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~------  304 (334)
                      +|++.          ++++|+||+|.++.+++.. .......+++++++||||.||++|+|+||+++++++.+.      
T Consensus       192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~  271 (394)
T PRK06836        192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA  271 (394)
T ss_pred             HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence            88642          6899999999999865422 222334678999999999999999999999998876432      


Q ss_pred             HHHhc---CCCCCcHHHHHHHHHHhcCc
Q 019868          305 LWRAK---QPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       305 l~~~~---~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +....   ..++++.+.|.++..++++.
T Consensus       272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~  299 (394)
T PRK06836        272 LVFANRILGFVNAPALMQRVVAKCLDAT  299 (394)
T ss_pred             HHHHhhccccccCCHHHHHHHHHHhCCh
Confidence            21111   22578899999999999874

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=6.9e-34  Score=259.87  Aligned_cols=238  Identities=26%  Similarity=0.371  Sum_probs=201.6

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCC-CCCCCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Yp~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      .|++.|.+.+.+|+.||++++|+++ ++++ ++|| .+..++-+++++|+      .+.++.|++++|...++..+++.|
T Consensus        25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~  103 (388)
T COG1168          25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL  103 (388)
T ss_pred             CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh
Confidence            7899999999999999999999987 5554 7888 45667777777764      578899999999999999999999


Q ss_pred             cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      .++||.|++..|.|+++.......|.+++..|+   +..|.+|+++|++++...++|+++|||||||||.+++.++|++|
T Consensus       104 T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i  183 (388)
T COG1168         104 TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKI  183 (388)
T ss_pred             CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHH
Confidence            999999999999999999999999999999984   34467899999999987778999999999999999999999998


Q ss_pred             HhC----CCeEEEccCCcCccCCC-Cchhh--hc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc---C
Q 019868          244 LEM----PILVVLDEAYTEFSGLE-SRMEW--VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK---Q  310 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~-~~~~~--~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~---~  310 (334)
                      +++    |+.||+||+|+++...+ .+...  +.  ..++.+++.|.||+|+++|+++++++. ++++.++..+..   .
T Consensus       184 ~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~  263 (388)
T COG1168         184 AELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNG  263 (388)
T ss_pred             HHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhc
Confidence            876    99999999999999755 32222  22  258899999999999999999999987 455544443332   2


Q ss_pred             CCCCcHHHHHHHHHHhcC-chhhc
Q 019868          311 PYNVSVAAEVAACAALQN-PIYLE  333 (334)
Q Consensus       311 ~~~~~~~~q~aa~~~L~~-~~~~~  333 (334)
                      ..++|.++..|..+++++ .+|++
T Consensus       264 ~~~~n~lg~~A~~aAY~~G~~WLd  287 (388)
T COG1168         264 LHGPSALGIIATEAAYNQGEPWLD  287 (388)
T ss_pred             CCCCchHHHHHHHHHHHhchHHHH
Confidence            357999999999999998 45554

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=1.4e-33  Score=276.60  Aligned_cols=202  Identities=20%  Similarity=0.277  Sum_probs=159.4

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCC-CcChHHHHHHHH-Hhc----C---CCCC--CEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYP-DPESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp-~~g~~~lr~~lA-~~~----~---~~~~--~I~~t~G~~~~i~~~~~  164 (334)
                      ++|+|+.|++++++++.+.+....+. +..|| ..|...++++++ +++    +   .+++  +|++|+|+++++..++.
T Consensus        95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~  173 (521)
T TIGR03801        95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD  173 (521)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            46999999999997655544444432 23575 346666676666 443    1   2333  89999999999999988


Q ss_pred             H-----hcCCCCEEEEcCCCChhHHHHHHHC--CCeEEEeeCC--CC-----CCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRK--SD-----FSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--G~~v~~v~~~--~~-----~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +     +++|||+|++++|+|+.|...+...  |++++.++.+  ++     |.+|.++++++++ +++|+|+|+|||||
T Consensus       174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP  252 (521)
T TIGR03801       174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP  252 (521)
T ss_pred             HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence            7     6899999999999999999987775  7788887743  22     8899999998876 68999999999999


Q ss_pred             cccCCcHHHHHHHHhC------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ||.+++.+++++|+++      +++||+||+|.+|.+........ ..+|+++++||||.||++|||+||++++++
T Consensus       253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~  327 (521)
T TIGR03801       253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKD  327 (521)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence            9999999999888652      69999999999988532211111 346999999999999999999999999764

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=3.3e-33  Score=272.96  Aligned_cols=235  Identities=29%  Similarity=0.438  Sum_probs=199.0

Q ss_pred             CCeeecCCCCCCCC--CCHHHHHHHhcC----c-C-CCCC-CCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHH
Q 019868           95 EDIVKIDANENPYG--PPPEVREALGQL----K-F-PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (334)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~-~-~~~Y-p~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i  159 (334)
                      ..+++|+.|.++..  +-..+.+++...    . . ...| +..|..+||+++++++    |  +++++|++|+|+++++
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            56799988875443  223444444331    1 1 3556 4479999999999987    3  5788999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE  238 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~  238 (334)
                      +++++.+++|||.|++++|+|......++..|++++.||.+ +.++|++++++.+++.++|++|++ +.+||||.+++.+
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~  247 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE  247 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence            99999999999999999999999999999999999999986 458999999999987789999998 7899999999999


Q ss_pred             HHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +.++|+++    +++||+||.|++|.+++.+   ....+..+++++++||||.+. ||+|+||+++|+++++.+.+.+..
T Consensus       248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~  326 (459)
T COG1167         248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA  326 (459)
T ss_pred             HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence            99998876    9999999999999976433   355566799999999999986 999999999999999998877765


Q ss_pred             --CCCcHHHHHHHHHHhcCchh
Q 019868          312 --YNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       312 --~~~~~~~q~aa~~~L~~~~~  331 (334)
                        ..++.+.|.+....+.++.|
T Consensus       327 ~~~~~s~~~Q~~la~~l~~G~~  348 (459)
T COG1167         327 ADLGPSSLSQAALAAFLLSGHY  348 (459)
T ss_pred             hcCCCChHHHHHHHHHHHcCCH
Confidence              67899999999988886544

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=2.5e-33  Score=271.47  Aligned_cols=234  Identities=21%  Similarity=0.246  Sum_probs=182.1

Q ss_pred             CCeeecCCCCCCCCCC--HHHHHHHhc-Cc------CCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868           95 EDIVKIDANENPYGPP--PEVREALGQ-LK------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL  158 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~-~~------~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~  158 (334)
                      .++|+|+.|.++..++  +.+.+++.. +.      ....|++. |..+||++||+++      ++++++|++|+|++++
T Consensus        30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a  109 (416)
T PRK09440         30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA  109 (416)
T ss_pred             CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence            4679999998875443  345566554 21      12469654 7999999999987      4788999999999999


Q ss_pred             HHHHHHHhcC-----CCCEEEE-cCCCChhHHHHHHHCCC------eEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEe
Q 019868          159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       159 i~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~G~------~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +.+++.++++     +||.|++ ++|+|+.|...+...|.      .++.++.+. ++.+|+++++  +. .++++++++
T Consensus       110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~  186 (416)
T PRK09440        110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS  186 (416)
T ss_pred             HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence            9999999885     6899999 69999999886654332      222232211 3689999987  33 578999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||||||.+++.+++++|++.    +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus       187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~  265 (416)
T PRK09440        187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE  265 (416)
T ss_pred             cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence            999999999999999998875    89999999998654221111111 125799999999995 999999999999999


Q ss_pred             HHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       301 ~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +++.+.+....  ++++.+.|.++.++|++++|.
T Consensus       266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~  299 (416)
T PRK09440        266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLL  299 (416)
T ss_pred             HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHH
Confidence            99999887765  467999999999999987764

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.8e-33  Score=253.53  Aligned_cols=237  Identities=22%  Similarity=0.313  Sum_probs=201.0

Q ss_pred             CCeeecCCCCCC----CCCCHHHHHHHhc-C--cCCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHH
Q 019868           95 EDIVKIDANENP----YGPPPEVREALGQ-L--KFPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID  160 (334)
Q Consensus        95 ~~~i~l~~~~~~----~~~~~~v~~al~~-~--~~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~  160 (334)
                      +.+|.|+.|++.    +++.++..+|+.+ +  ...++| |..|....|+++|+++      .+++++|++|+|..++|+
T Consensus        61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe  140 (447)
T KOG0259|consen   61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE  140 (447)
T ss_pred             ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence            478999999863    4567777777665 3  234789 8889999999999995      367899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .++.+|.+||..|++|.|+|+.|...+...|++++.++  .+.+|.+|++.++..++ ++|.+++++||+||.|.+++.+
T Consensus       141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~  219 (447)
T KOG0259|consen  141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED  219 (447)
T ss_pred             HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence            99999999999999999999999999999999999998  46789999999999997 7999999999999999999999


Q ss_pred             HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcC--------HHHHH
Q 019868          239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE  303 (334)
Q Consensus       239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--------~~~i~  303 (334)
                      -|++|++.    +++||.||+|.++.++..+.   ..+...-.++.++|+||.|-.||||+||++..        ..+++
T Consensus       220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q  299 (447)
T KOG0259|consen  220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ  299 (447)
T ss_pred             HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence            99999875    99999999999999865432   22333456899999999999999999999873        33456


Q ss_pred             HHHHhcCC-CCCcHHHHHHHHHHhcC--chhh
Q 019868          304 YLWRAKQP-YNVSVAAEVAACAALQN--PIYL  332 (334)
Q Consensus       304 ~l~~~~~~-~~~~~~~q~aa~~~L~~--~~~~  332 (334)
                      .+.+..+- ..++++.|.|.-.+|+.  ++|+
T Consensus       300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF  331 (447)
T KOG0259|consen  300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFF  331 (447)
T ss_pred             HHHHHHhccCCccHhHHHHhHHHHHhChHHHH
Confidence            66666554 57889999999999986  4544

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=4.7e-33  Score=288.59  Aligned_cols=234  Identities=16%  Similarity=0.242  Sum_probs=183.9

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCC-CCCc-ChHHHHHHHHHhcCCCCC---CEEEeCCHHHHHHHHHHHh
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI-YPDP-ESRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV  166 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~-Yp~~-g~~~lr~~lA~~~~~~~~---~I~~t~G~~~~i~~~~~~l  166 (334)
                      .+.++|+|+.|+|++++|+.+++++.+ +..... ++.+ ....+++.+++++|++.+   +|++|+|+++++..++.++
T Consensus       695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL  774 (1082)
T PLN02672        695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC  774 (1082)
T ss_pred             CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence            456899999999999999999999876 322111 1222 145566666666777554   8999999999999999999


Q ss_pred             cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCC-CccccCCcHHHHHHH
Q 019868          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI  243 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~-NPtG~~~~~~~l~~l  243 (334)
                      +++||+|+++.|+|+.|...++..|++++.+|.+  ++|.+|++.+++++++.+.++|++++|| ||||.+++.+++++|
T Consensus       775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L  854 (1082)
T PLN02672        775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI  854 (1082)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence            9999999999999999999999999999999964  4689999999999864345689999997 999999999999999


Q ss_pred             HhC----CCeEEEccCCcCccCCCCc------hhhh---cC---CCcEEEEcCCchhhcccccchheeEcCH-HHHHHHH
Q 019868          244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW  306 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~~------~~~~---~~---~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~  306 (334)
                      ++.    +++||+||+|.++.+.+..      ....   ..   ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus       855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~  934 (1082)
T PLN02672        855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH  934 (1082)
T ss_pred             HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence            875    8999999999988764321      1111   11   2379999999999999999999999964 5889888


Q ss_pred             HhcCCCCC---cHHHHHHHHHHh
Q 019868          307 RAKQPYNV---SVAAEVAACAAL  326 (334)
Q Consensus       307 ~~~~~~~~---~~~~q~aa~~~L  326 (334)
                      +......+   +..++.++.+++
T Consensus       935 ~~~~~s~~~~~~q~Aaaaalall  957 (1082)
T PLN02672        935 SAPGLSRPHSTLKYTIKKLLGLK  957 (1082)
T ss_pred             HhhhhcCCCcHHHHHHHHHHHHH
Confidence            76443333   344444444444

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-32  Score=264.55  Aligned_cols=222  Identities=21%  Similarity=0.294  Sum_probs=174.6

Q ss_pred             HHHHHHHhcC--cCCCCCC-CcChHHHHHHHHHhc-----CCCC---CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868          111 PEVREALGQL--KFPYIYP-DPESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (334)
Q Consensus       111 ~~v~~al~~~--~~~~~Yp-~~g~~~lr~~lA~~~-----~~~~---~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~  179 (334)
                      +.+.+++.+.  .....|+ ..|.++||+++++++     ...+   ++|++|+|+++++.+++..++++||+|++++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~  102 (388)
T PRK08637         23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN  102 (388)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence            3444555542  2346784 458999999999876     2332   578999999999999999999999999999999


Q ss_pred             ChhHHHHHH-HCCCeEEEeeCC-CCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHHHHHHHHh---------
Q 019868          180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE---------  245 (334)
Q Consensus       180 y~~~~~~~~-~~G~~v~~v~~~-~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~---------  245 (334)
                      |+.|...+. ..|++++.+|.. +++++|++++++.++   ++..+++++++||||||.+++.+++++|++         
T Consensus       103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~  182 (388)
T PRK08637        103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG  182 (388)
T ss_pred             CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999998754 589999999963 557899999998875   234556777899999999999999999876         


Q ss_pred             CCCeEEEccCCcCccCCCCch----hh-hcCCCcE--EEEcCCchhhcccccchheeEcC------HHHHHHHHHhc---
Q 019868          246 MPILVVLDEAYTEFSGLESRM----EW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRAK---  309 (334)
Q Consensus       246 ~~~~lIvDeay~~~~~~~~~~----~~-~~~~~~~--i~i~S~SK~~gl~G~R~G~l~~~------~~~i~~l~~~~---  309 (334)
                      .+++||+||+|.+|.+++...    .. .+..+++  ++++||||.|+++|+|+||++++      +++++.+.+..   
T Consensus       183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~  262 (388)
T PRK08637        183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL  262 (388)
T ss_pred             CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence            379999999999998654221    11 2345675  45569999999999999999864      67777775421   


Q ss_pred             ---CCCCCcHHHHHHHHHHhcCchhh
Q 019868          310 ---QPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       310 ---~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                         ..+++|.++|.++.++|++++|.
T Consensus       263 ~~~~~~~~s~~~q~a~~~~l~~~~~~  288 (388)
T PRK08637        263 IRSNISNGPHPSQSAVLRALNSPEFD  288 (388)
T ss_pred             hhcccCCCCcHHHHHHHHHhCCHHHH
Confidence               23578999999999999987764

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-30  Score=235.17  Aligned_cols=241  Identities=23%  Similarity=0.326  Sum_probs=195.9

Q ss_pred             CCCCeeecCCCCCCCCC--CH-HHHH---H---Hhc----CcCCCCCCCc-ChHHHHHHHHHhc--------CCCCCCEE
Q 019868           93 KPEDIVKIDANENPYGP--PP-EVRE---A---LGQ----LKFPYIYPDP-ESRRLRAALAKDS--------GLESDHIL  150 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~--~~-~v~~---a---l~~----~~~~~~Yp~~-g~~~lr~~lA~~~--------~~~~~~I~  150 (334)
                      .+..+|.++..||..-.  -. .+.+   +   .++    ......|++. |.+.+|+++|+++        ..+|++++
T Consensus        71 Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~V  150 (471)
T KOG0256|consen   71 NPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVV  150 (471)
T ss_pred             CchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceE
Confidence            34557888888876521  11 1111   1   111    1122446654 8999999999987        36899999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEee--CCCCCCCCHHHHHHhccc-----CCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVP--RKSDFSLNVELIADAVER-----EKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~--~~~~~~~d~~~l~~~l~~-----~~~~~i  222 (334)
                      +++|++.+...++-.|++|||..++|.|.|+.+...++. .|+++++|.  ..++|.++.+++|+++.+     .+.|.|
T Consensus       151 v~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGv  230 (471)
T KOG0256|consen  151 VTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGV  230 (471)
T ss_pred             EecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEE
Confidence            999999999999999999999999999999999877765 688998887  457799999999998753     468999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-------hhhc-CCCcEEEEcCCchhhccccc
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-------EWVK-KHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-------~~~~-~~~~~i~i~S~SK~~gl~G~  290 (334)
                      +|+||+||.|.+++++++..+++.    ++.||+||+|+.-.++.+-.       .... ..+++.++.|+||.||+||+
T Consensus       231 litNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGf  310 (471)
T KOG0256|consen  231 LITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGF  310 (471)
T ss_pred             EEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCce
Confidence            999999999999999999999986    99999999999877654311       1111 46789999999999999999


Q ss_pred             chheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          291 RVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       291 R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      |+|.+.. +++++.+..+......+|+..|..+...|.|.+|.+
T Consensus       311 RvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~  354 (471)
T KOG0256|consen  311 RVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR  354 (471)
T ss_pred             EEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence            9999988 778999999999888999999999999999976654

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.95  E-value=2.5e-26  Score=215.83  Aligned_cols=231  Identities=36%  Similarity=0.561  Sum_probs=190.4

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc--C-cCCCCC-CCcChHHHHHHHHHhcCCC------CCCEEEeCCHHHHHHHHHHHhc
Q 019868           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y-p~~g~~~lr~~lA~~~~~~------~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      ++|+.|.+++.+++.+++++..  . .....| +..+..++++.++++++..      .+++++++|+++++..++.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~   80 (350)
T cd00609           1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL   80 (350)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence            5789999999988887766542  2 233455 5568899999999998644      6789999999999999999999


Q ss_pred             CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCH--HHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH--
Q 019868          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI--  243 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~--~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l--  243 (334)
                      ++||+|+++.++|..+...++..|.+++.++.++++..+.  +.++.... +++++|++++|+||||.+++.+++++|  
T Consensus        81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~  159 (350)
T cd00609          81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE  159 (350)
T ss_pred             CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence            9999999999999999999999999999999765555554  56665554 689999999999999999999999854  


Q ss_pred             -HhC-CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCC--CCCc
Q 019868          244 -LEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS  315 (334)
Q Consensus       244 -~~~-~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~--~~~~  315 (334)
                       ++. ++++|+|++|+.+...+...   ......+++++++|++|.++++|.|+||+++++ ++++.+......  ++.+
T Consensus       160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
T cd00609         160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS  239 (350)
T ss_pred             HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence             444 99999999999877543322   233456789999999999998999999999988 788888777665  6789


Q ss_pred             HHHHHHHHHHhcCc
Q 019868          316 VAAEVAACAALQNP  329 (334)
Q Consensus       316 ~~~q~aa~~~L~~~  329 (334)
                      ...+.++..+|+..
T Consensus       240 ~~~~~~~~~~l~~~  253 (350)
T cd00609         240 TLSQAAAAAALDDG  253 (350)
T ss_pred             hHHHHHHHHHHhCc
Confidence            99999999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PRK07049 methionine gamma-lyase; Validated

Probab=99.94  E-value=1.5e-25  Score=217.26  Aligned_cols=194  Identities=16%  Similarity=0.199  Sum_probs=160.7

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~  199 (334)
                      .+|+++....|+++||++.+.  +++++++|+++++..++.+++++||.|+++.|.|+.|...+    ...|++++.++.
T Consensus        78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~  155 (427)
T PRK07049         78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD  155 (427)
T ss_pred             cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence            668888899999999999984  46888888889999999999999999999999999887653    457998887763


Q ss_pred             CCCCCCCHHHHHHhcc----cCCceEEEEeCCCCccccCCcHHHHHHHHhC-------CCeEEEccCCcCccCCCCchhh
Q 019868          200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW  268 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~----~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-------~~~lIvDeay~~~~~~~~~~~~  268 (334)
                          ..|++.+++.+.    ++++|+|++++|+||||.+++.+++.+|++.       ++++|+||+|..+.... +.  
T Consensus       156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl--  228 (427)
T PRK07049        156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL--  228 (427)
T ss_pred             ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence                246677766553    3578999999999999999999999999975       67899999987544321 11  


Q ss_pred             hcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhcC
Q 019868          269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQN  328 (334)
Q Consensus       269 ~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~~L~~  328 (334)
                        ..++.++++||||.|| ++|+|+||+++++++++.+.+.+..++  ++++.|.++...|+.
T Consensus       229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t  289 (427)
T PRK07049        229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET  289 (427)
T ss_pred             --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh
Confidence              3356799999999998 699999999999999999988777654  889999998888864

>PRK10534 L-threonine aldolase; Provisional

Probab=99.93  E-value=1.3e-25  Score=211.21  Aligned_cols=222  Identities=18%  Similarity=0.185  Sum_probs=166.2

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl  174 (334)
                      .|||++|+++. ++|.+.+++.+ ......| |+++..+|++++|+++|+++.  ++++|+++++...+.+++++||+|+
T Consensus         1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~~--~v~~~g~~a~~~~l~~~~~~gd~vi   77 (333)
T PRK10534          1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAA--LFLPTGTQANLVALLSHCERGEEYI   77 (333)
T ss_pred             CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCeE--EEeCchHHHHHHHHHHhcCCCCeeE
Confidence            37999999999 88999999876 3344668 888999999999999998644  5667777777777777889999999


Q ss_pred             EcCCCChh-HHHH-HHHCC-CeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       175 ~~~p~y~~-~~~~-~~~~G-~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      ++.|+|.. |... +...| ++++.++.+++|.+|++++++++.+.     ++++|++|||+  ||.+++.+++++|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~  155 (333)
T PRK10534         78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF  155 (333)
T ss_pred             EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence            99888853 4321 23333 78888876677899999999998632     58999999876  5999999999887653


Q ss_pred             ----CCeEEEccCCcCccC--CCCchhhhcCC-CcEEEEcCCchhhcccccchh-eeEcCHHHHHHHHHhcCCC----CC
Q 019868          247 ----PILVVLDEAYTEFSG--LESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPY----NV  314 (334)
Q Consensus       247 ----~~~lIvDeay~~~~~--~~~~~~~~~~~-~~~i~i~S~SK~~gl~G~R~G-~l~~~~~~i~~l~~~~~~~----~~  314 (334)
                          ++++++||+|..+..  .+.....+... ++++  .||||.||++   +| |+++++++++.+.+.+.++    +.
T Consensus       156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~  230 (333)
T PRK10534        156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQ  230 (333)
T ss_pred             HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhh
Confidence                899999999873221  12222222222 3333  3899988764   67 6888999999998877653    33


Q ss_pred             cHHHHHHHHHHhcC
Q 019868          315 SVAAEVAACAALQN  328 (334)
Q Consensus       315 ~~~~q~aa~~~L~~  328 (334)
                      +.++|.++.++|++
T Consensus       231 ~~~~~a~~~~~l~~  244 (333)
T PRK10534        231 AGILAAAGLYALKH  244 (333)
T ss_pred             HHHHHHHHHHHHHh
Confidence            45778888888875

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=5.9e-25  Score=201.48  Aligned_cols=260  Identities=19%  Similarity=0.222  Sum_probs=192.8

Q ss_pred             hhCCCCCCCcHHHHHHHhCCCC-CCeeecCCCC--CCCCC---CHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc
Q 019868           73 KLKPYQPILPFEVLSIQLGRKP-EDIVKIDANE--NPYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS  142 (334)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~--~~~~~---~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~  142 (334)
                      ++..+ +.+++..+...+..++ .+.|||++|.  +..+.   -+.|++|-+.+   .....| |..|.+++++++++++
T Consensus         4 ~i~~~-p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll   82 (396)
T COG1448           4 KIEAA-PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL   82 (396)
T ss_pred             ccccC-CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh
Confidence            34444 5667777888887766 4579999983  33333   35566665543   344667 8889999999999986


Q ss_pred             -C-----CCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHH
Q 019868          143 -G-----LESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELI  210 (334)
Q Consensus       143 -~-----~~~~~I--~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l  210 (334)
                       |     +..++|  +-|.|+|.++.....-+.  .+..+|.+++|+|+++..++...|.++..+|  ..++..+|.+.+
T Consensus        83 FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~m  162 (396)
T COG1448          83 FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGM  162 (396)
T ss_pred             cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHH
Confidence             5     333444  348899999998877543  5667899999999999999999999999999  334567999999


Q ss_pred             HHhcccCCc-eEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-----CchhhhcCCCcEEEEc
Q 019868          211 ADAVEREKP-KCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-----SRMEWVKKHDNLIVLR  279 (334)
Q Consensus       211 ~~~l~~~~~-~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-----~~~~~~~~~~~~i~i~  279 (334)
                      .+.+++-.. .+|+|. -.|||||..++.++|.+|++.    +.+.++|-+|++|..+-     .....+.....++++.
T Consensus       163 la~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~  242 (396)
T COG1448         163 LADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVAS  242 (396)
T ss_pred             HHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEe
Confidence            988875333 455555 449999999999999999986    89999999999998532     1122233345599999


Q ss_pred             CCchhhcccccchheeEc---CHHHHHHH----HHh-cC-CCCCcHHHHHHHHHHhcCchhhc
Q 019868          280 TFSKRAGLAGLRVGYGAF---PLSIIEYL----WRA-KQ-PYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~---~~~~i~~l----~~~-~~-~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      ||||+||++|.|+|.+.+   +.+..+++    ... +. +.+++..+..++..+|+|++..+
T Consensus       243 S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra  305 (396)
T COG1448         243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRA  305 (396)
T ss_pred             hhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHH
Confidence            999999999999998864   44544433    222 22 35788899999999999986643

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.93  E-value=1e-24  Score=212.85  Aligned_cols=249  Identities=15%  Similarity=0.144  Sum_probs=184.0

Q ss_pred             hCCCCCCCcHHHHHHHhCCCCCCeeecCCCCC--CCCCCH---HHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhcCCC
Q 019868           74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-LK-FPYIY-PDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~~~~  145 (334)
                      +.|+ ........++++...+.++++|++|++  ++.++.   .+.+++.+ +. ....| +..|..+||++++++++. 
T Consensus        16 v~~~-~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~-   93 (460)
T PRK13238         16 VEPI-RLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY-   93 (460)
T ss_pred             eccc-cccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC-
Confidence            4444 344566667777777889999999998  787765   45655443 32 23578 677999999999999985 


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--------CCCC--CCHHHHHHhcc
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFS--LNVELIADAVE  215 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--------~~~~--~d~~~l~~~l~  215 (334)
                       ++|++|+|+++++..++.++++||| |++++|.|..|...+...|++++.++.+        ++|.  +|++++++.++
T Consensus        94 -~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~  171 (460)
T PRK13238         94 -PYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIE  171 (460)
T ss_pred             -CcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHh
Confidence             5899999999999999999999999 9999999999999899999999999853        2354  99999999997


Q ss_pred             c---CCceEEEEeCCCCccc-cCCcHHHHHHHHhC----CCeEEEccCCcC--ccCCC-----CchhhhcCCCcEEEEcC
Q 019868          216 R---EKPKCIFLTSPNNPDG-SIINDEDLLKILEM----PILVVLDEAYTE--FSGLE-----SRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       216 ~---~~~~~i~l~~p~NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~--~~~~~-----~~~~~~~~~~~~i~i~S  280 (334)
                      +   +++++|++++|||||| .+++.+++++|+++    |++||+|+++..  ..+..     .....+.  +-+..++|
T Consensus       172 ~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~--~i~~~~~s  249 (460)
T PRK13238        172 EVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIK--EIAREMFS  249 (460)
T ss_pred             hcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHH--HHhhhhcc
Confidence            4   3689999999999998 99999877776653    999999997632  21210     0000000  11344578


Q ss_pred             Cchhhcccccchh------eeEcC-HHHHHHHHHhc----C--CCCC-cHHHHHHHHHHhcC
Q 019868          281 FSKRAGLAGLRVG------YGAFP-LSIIEYLWRAK----Q--PYNV-SVAAEVAACAALQN  328 (334)
Q Consensus       281 ~SK~~gl~G~R~G------~l~~~-~~~i~~l~~~~----~--~~~~-~~~~q~aa~~~L~~  328 (334)
                      ++|.+.++|+|+|      +++++ +++++.+++..    .  .++. +...|.|+..+|++
T Consensus       250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e  311 (460)
T PRK13238        250 YADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYE  311 (460)
T ss_pred             cCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHH
Confidence            8888888888864      55566 58888887664    1  1333 44557777766653

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.92  E-value=1.5e-24  Score=203.94  Aligned_cols=221  Identities=21%  Similarity=0.221  Sum_probs=169.0

Q ss_pred             CCCCCCCCHHHHHHHhc-CcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868          103 NENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~-~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y  180 (334)
                      .++++++++.+++++.+ ......| ++....++++.+++++|  ++++++++|+++++..++.+++++||+|++++|+|
T Consensus         4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~   81 (338)
T cd06502           4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH   81 (338)
T ss_pred             cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence            37889999999999876 3222345 66778999999999999  56777888888999999999999999999999998


Q ss_pred             hhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868          181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (334)
Q Consensus       181 ~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~  247 (334)
                      ..+..   .+...|++++.++.+. +.+|++++++++++      .++++|++++|||| |.+++.+++++|++.    +
T Consensus        82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~  159 (338)
T cd06502          82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG  159 (338)
T ss_pred             eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence            75432   3455899999998754 68999999999863      26899999999997 667788887777654    8


Q ss_pred             CeEEEccCCcCcc--CCCCchhhhcCCCcEEEEcCCchhhcccccchhe-eEcCHHHHHHHHHhcC----CCCCcHHHHH
Q 019868          248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQ----PYNVSVAAEV  320 (334)
Q Consensus       248 ~~lIvDeay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~-l~~~~~~i~~l~~~~~----~~~~~~~~q~  320 (334)
                      +++|+||+|..+.  ..+....... .+..+++.|+||.||++|   |+ +++++++++.+.....    .++.+.+.+.
T Consensus       160 ~~livDea~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (338)
T cd06502         160 LPLHLDGARLANAAAALGVALKTYK-SGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAA  235 (338)
T ss_pred             CeEeechHHHHHHHHhcCCCHHHHH-hcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHH
Confidence            9999999986543  1111111111 122366889999999887   54 5678899998876653    2456788899


Q ss_pred             HHHHHhcCchh
Q 019868          321 AACAALQNPIY  331 (334)
Q Consensus       321 aa~~~L~~~~~  331 (334)
                      ++..+|++..|
T Consensus       236 a~~~~L~~~~~  246 (338)
T cd06502         236 AGLAALENDLW  246 (338)
T ss_pred             HHHHHhcCchH
Confidence            99999987544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.92  E-value=1.4e-23  Score=199.61  Aligned_cols=202  Identities=21%  Similarity=0.203  Sum_probs=160.3

Q ss_pred             CCCCCCHHHHHHHhcCcCC-------C-CC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868          105 NPYGPPPEVREALGQLKFP-------Y-IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~-------~-~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      .+-+..+++++++.....+       . ..   .++...++++++|+++|+  +++++++|+++++..++.+++++||+|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~V   86 (361)
T cd06452           9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWV   86 (361)
T ss_pred             cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEE
Confidence            3444567777777653211       0 11   123467999999999998  789999999999999999999999999


Q ss_pred             EEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                      +++.++|......++..|++++.++.+.  +|.+|++++++++++      .++++|++++|+||||...+.+++.++++
T Consensus        87 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~  166 (361)
T cd06452          87 VVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCH  166 (361)
T ss_pred             EEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence            9999988766667888999999998653  358999999998852      36899999999999999999999999998


Q ss_pred             C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCC
Q 019868          246 M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (334)
Q Consensus       246 ~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~  313 (334)
                      . ++++|+|++|........    ....+..++++|++|.++ ++.|+||+++++++++.+.+.+.+|+
T Consensus       167 ~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~  230 (361)
T cd06452         167 EYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFK  230 (361)
T ss_pred             HcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccc
Confidence            7 999999999984321111    112345799999999997 55699999999999999887765543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.92  E-value=3.2e-23  Score=199.18  Aligned_cols=226  Identities=15%  Similarity=0.154  Sum_probs=172.3

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCCCC-Cc---Ch----HHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIYP-DP---ES----RRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~Yp-~~---g~----~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.++|+|+.|++ .++++|+++++..+ +. .+.+|+ ..   |.    .+||+++|++++.  +++++++|+++++..
T Consensus        36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~  113 (393)
T TIGR01822        36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG  113 (393)
T ss_pred             CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence            4578999999985 78888998887665 32 234553 22   43    7899999999996  467888899999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---C--CceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~--~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.+++++||.|++++|.|+.+...++..+.+.+.++     ..|++++++.+++   .  ++++|++.+++||||.+.+
T Consensus       114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~  188 (393)
T TIGR01822       114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP  188 (393)
T ss_pred             HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence            9999999999999999999999988888888776553     3688999988863   2  6788888899999999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCC---Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      .+++.++++. ++++|+||+|.......   ......+ ..+.+++++|+||.+  +|+|+||+++++++++.+.+....
T Consensus       189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~  266 (393)
T TIGR01822       189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP  266 (393)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence            9999999987 99999999995322211   1111121 124569999999976  478999999999999988775433


Q ss_pred             C----CCcHHHHHHHHHHhc
Q 019868          312 Y----NVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ~----~~~~~~q~aa~~~L~  327 (334)
                      +    +.++..+.++.++|+
T Consensus       267 ~~~~~~~~~~~~~a~~~al~  286 (393)
T TIGR01822       267 YLFSNSLPPAVVGASIKVLE  286 (393)
T ss_pred             ceecCCCCHHHHHHHHHHHH
Confidence            2    234454555555553

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.92  E-value=3.8e-23  Score=199.29  Aligned_cols=203  Identities=21%  Similarity=0.214  Sum_probs=161.6

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-----------cChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDLI  162 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~~  162 (334)
                      +.+.|+.+... ++|+.+.+++.+ +......+.           ...+++|+++|+++|+ ++++|++|+|+++++..+
T Consensus        19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~   97 (401)
T PRK10874         19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLV   97 (401)
T ss_pred             ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHH
Confidence            46888887665 356778887765 221111111           1256899999999999 789999999999999999


Q ss_pred             HHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +.++    +++||+|+++++.|+.    +...++..|++++.++.+.++.+|++++++.++ +++++|++++|+||||.+
T Consensus        98 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~~  176 (401)
T PRK10874         98 AQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGGC  176 (401)
T ss_pred             HHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccCc
Confidence            9987    3789999999999864    556677789999999977778899999999996 689999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ++.+++.++++. ++++|+|++|........    +...+..+++.|++|.||.+|  +||+++++++++.+.
T Consensus       177 ~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~  243 (401)
T PRK10874        177 PDLARAITLAHQAGMVVMVDGAQGAVHFPAD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMS  243 (401)
T ss_pred             CCHHHHHHHHHHcCCEEEEECCcccccccCC----chhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCC
Confidence            999999999987 999999999964322111    122345688999999888777  699999999888764

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.91  E-value=7e-23  Score=197.27  Aligned_cols=203  Identities=20%  Similarity=0.232  Sum_probs=160.2

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC-cC--C-CCC-CC-------cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL-KF--P-YIY-PD-------PESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~--~-~~Y-p~-------~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~  162 (334)
                      +.+.|+.+... ++|+.+.+++.+. ..  . ..+ +.       ...+++|+.+|+++|++ +++|++|+|+++++..+
T Consensus        16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~   94 (398)
T TIGR03392        16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV   94 (398)
T ss_pred             CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence            47888877665 3567788877652 11  1 111 11       12457999999999984 78999999999999999


Q ss_pred             HHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +.++    +++||+|++++|.|+.    +...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+
T Consensus        95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~  173 (398)
T TIGR03392        95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC  173 (398)
T ss_pred             HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence            9987    4789999999999864    455667899999999977677899999999997 689999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      .+.+++.++++. ++++|+|++|........    +...+..+++.|++|.+|.+|  +||+++++++++.+.
T Consensus       174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~  240 (398)
T TIGR03392       174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMP  240 (398)
T ss_pred             CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCC
Confidence            999999999987 999999999965432111    112234588889999888666  899999999887663

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.91  E-value=2.8e-23  Score=196.29  Aligned_cols=207  Identities=15%  Similarity=0.157  Sum_probs=157.4

Q ss_pred             CCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc---CCCChh
Q 019868          107 YGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTFTM  182 (334)
Q Consensus       107 ~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~---~p~y~~  182 (334)
                      +...|.++++..+ +....+ +..-..+|++++|+++|++++++++++|+++++..++.+++++||+|+++   .|+|..
T Consensus        32 l~~~~~~~~~~~~~~~~~~g-~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s  110 (346)
T TIGR03576        32 LAGGFKIDEEDLELLETYVG-PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPS  110 (346)
T ss_pred             CCCChhHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchh
Confidence            3445777776554 221011 11236789999999999999999999999999999999999999999975   479999


Q ss_pred             HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcC
Q 019868          183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE  258 (334)
Q Consensus       183 ~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~  258 (334)
                      |...++..|++++.+       .|+++++. .  +++++|+++ ++||+|.+++.+++++|++.    ++++|+||+|..
T Consensus       111 ~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~  179 (346)
T TIGR03576       111 IPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA  179 (346)
T ss_pred             HHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            999999999987543       14555432 2  457888885 46999999988888887753    899999999998


Q ss_pred             ccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhcC
Q 019868          259 FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQN  328 (334)
Q Consensus       259 ~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~--~~~~~~q~aa~~~L~~  328 (334)
                      +.... ...... ..+..+++.||||  +++|+|+||+++++++++.+.+...++  +++++.|+++.++|++
T Consensus       180 ~~~~~~~~~~~~-~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~  249 (346)
T TIGR03576       180 RVRRLYGQPPAL-DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEE  249 (346)
T ss_pred             cccccCCCCCHH-HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence            65211 100111 1123477889999  578999999999999999999988774  4688999999999976

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.91  E-value=5.5e-23  Score=194.56  Aligned_cols=224  Identities=24%  Similarity=0.257  Sum_probs=169.7

Q ss_pred             CCCCeeecCCCCCCCC--CCHHHHHHHhc-Cc-CCCC-------CCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~~-------Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      .++++|||+.|+ +++  .++++++++.+ +. +...       |+. +...+++++++++++. +++|++++|+.+.+ 
T Consensus        14 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~-   90 (360)
T TIGR00858        14 DGRRLLNFSSND-YLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV-   90 (360)
T ss_pred             CCceEEecccCC-cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence            567899999984 444  55888888765 22 1111       121 2256799999999984 57888888876655 


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcH
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      .++..++++||+|++++|+|..+...++..|++++.++.     +|++.+++.+++   .++++|++.+++||||...+.
T Consensus        91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~  165 (360)
T TIGR00858        91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL  165 (360)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence            466778899999999999999999988999999988763     588999988864   246888888999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCC---chhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +++.++++. ++++|+||+|..+.....   ....  +...+++++++||||.||++|   ||+++++++++.+.+....
T Consensus       166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~  242 (360)
T TIGR00858       166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART  242 (360)
T ss_pred             HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence            999999987 999999999986543221   1221  123478999999999998777   9999999999888655443


Q ss_pred             C----CCcHHHHHHHHHHhc
Q 019868          312 Y----NVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ~----~~~~~~q~aa~~~L~  327 (334)
                      +    +.++..+.++.++++
T Consensus       243 ~~~~~~~~~~~~~a~~~al~  262 (360)
T TIGR00858       243 LIFSTALPPAVAAAALAALE  262 (360)
T ss_pred             ceecCCCCHHHHHHHHHHHH
Confidence            2    345565666666665

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.91  E-value=2.5e-23  Score=198.59  Aligned_cols=191  Identities=19%  Similarity=0.158  Sum_probs=155.8

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHH
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~  208 (334)
                      ..++++.+|+++|++  .+++++|+++++..++.+++++||+|+++.+.|......++..|++++.++..  .++.+|++
T Consensus        53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~  130 (370)
T TIGR02539        53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE  130 (370)
T ss_pred             HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence            568899999999986  56678999999999999999999999999888654446778899999999964  35789999


Q ss_pred             HHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       209 ~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      ++++.+++      +++++|++++|+||||...+.+++.++++. ++++|+||+|..+......    ...+..++++||
T Consensus       131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~----~~~~~di~v~s~  206 (370)
T TIGR02539       131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSA----KEIGADFIVGSG  206 (370)
T ss_pred             HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCH----HHcCCCEEEeeC
Confidence            99998853      367899999999999999999999999987 9999999999875321111    122345788999


Q ss_pred             chhhcccccchheeEcCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHhcC
Q 019868          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~----------~q~aa~~~L~~  328 (334)
                      ||.|+ +|.|+||+++++++++.+.+...+|+.+.+          ++.++.++|++
T Consensus       207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  262 (370)
T TIGR02539       207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH  262 (370)
T ss_pred             ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH
Confidence            99998 577899999999999999888776655443          66666666654

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PLN02242 methionine gamma-lyase

Probab=99.91  E-value=3.7e-23  Score=199.91  Aligned_cols=189  Identities=15%  Similarity=0.138  Sum_probs=154.4

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-----HHCCCeEEEeeCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK  200 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~G~~v~~v~~~  200 (334)
                      |+++...+|++.+|+++|.+  .+++++|+++++..++.+++++||+|+++.|.|+.+...+     +..|++++.++. 
T Consensus        73 ~~~Pt~~~LE~~lA~l~g~~--~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~-  149 (418)
T PLN02242         73 HFNPTVLNLGRQMAALEGTE--AAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI-  149 (418)
T ss_pred             CCChhHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence            36777899999999999864  6788999999999999999999999999999998776554     347888877753 


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          .|++++++++++.++++|++++|+||||.+.+.+++.++++. +++||+||+|..+...+  .    ..+.+++++
T Consensus       150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~--~----~~g~divv~  219 (418)
T PLN02242        150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP--A----RLGADVVVH  219 (418)
T ss_pred             ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH--H----HcCCcEEEE
Confidence                289999999973359999999999999999999999999987 99999999998765422  1    124569999


Q ss_pred             CCchhhcccccc-hheeEcCHHHHHHHHHhcC----CCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G~R-~G~l~~~~~~i~~l~~~~~----~~~~~~~~q~aa~~~L~  327 (334)
                      ||||.|+.+|+| .||+++++++++.+.+.+.    .++.....|.++..++.
T Consensus       220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~  272 (418)
T PLN02242        220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSER  272 (418)
T ss_pred             eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence            999999989988 5999999999998887644    24455556666665554

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.91  E-value=7.6e-23  Score=197.04  Aligned_cols=192  Identities=16%  Similarity=0.169  Sum_probs=157.1

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~  199 (334)
                      .+||+++..+|++++|++++.  +++++++|+++++..++.+++++||+|+++.|.|+.+..    .++..|++++.++.
T Consensus        59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~  136 (400)
T PRK06234         59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT  136 (400)
T ss_pred             cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence            446788999999999999995  367888888899999998899999999999998875443    34668999999874


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i  276 (334)
                      .     |+++++++++ +++++|++++|+||||.+.+.+++.++++.   ++++|+||+|..+... ...    ..+..+
T Consensus       137 ~-----d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~-~~l----~~g~Di  205 (400)
T PRK06234        137 S-----NLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ-RPL----QLGADV  205 (400)
T ss_pred             C-----CHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC-Cch----hhCCcE
Confidence            2     7899999997 689999999999999999999999999986   7999999999866542 111    224569


Q ss_pred             EEcCCchhhcccccch-heeEcCHHHHHHHHHhc--C--CCCCcHHHHHHHHHHhcC
Q 019868          277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK--Q--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~--~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +++|+||.++.+|+|+ ||+++++++++.++...  .  ...++++..+.+...|+.
T Consensus       206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t  262 (400)
T PRK06234        206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT  262 (400)
T ss_pred             EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence            9999999999889876 99999999888876432  1  245777777777777764

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.90  E-value=6e-22  Score=190.26  Aligned_cols=225  Identities=20%  Similarity=0.225  Sum_probs=166.3

Q ss_pred             CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CCCCCCC----cCh----HHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~~~Yp~----~g~----~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.++|+|..++ +.+++++.+.+++.+ +. ..+.|+.    .|.    .++++.++++++.+ ++|++|+| ++++..
T Consensus        40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~  117 (397)
T PRK06939         40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG  117 (397)
T ss_pred             CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence            567899999887 578888988887765 22 2233321    243    45667777777864 78888888 678888


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---C--CceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~--~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.+++++||+|++++|+|+.+...+...|++++.++.     .|++++++.+++   .  ++++|++.+.+|+||...+
T Consensus       118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~  192 (397)
T PRK06939        118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP  192 (397)
T ss_pred             HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence            88889999999999999999999888889999888763     478888887752   2  6777887778999999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcC-ccC-CCC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          237 DEDLLKILEM-PILVVLDEAYTE-FSG-LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~-~~~-~~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      .+++.++++. ++++|+||+|.. +.. .+. ...... ..+.+++++||||.++  |+|+||+++++++++.+.+...+
T Consensus       193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~  270 (397)
T PRK06939        193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP  270 (397)
T ss_pred             HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence            9999999987 999999999963 221 111 112111 1245799999999884  67999999999999998775443


Q ss_pred             C----CCcHHHHHHHHHHh
Q 019868          312 Y----NVSVAAEVAACAAL  326 (334)
Q Consensus       312 ~----~~~~~~q~aa~~~L  326 (334)
                      +    ..++..+.++.+++
T Consensus       271 ~~~~~~~~~~~~~a~~~al  289 (397)
T PRK06939        271 YLFSNSLAPAIVAASIKVL  289 (397)
T ss_pred             ccccCCCCHHHHHHHHHHH
Confidence            2    22344455554544

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.89  E-value=6.7e-22  Score=190.67  Aligned_cols=205  Identities=20%  Similarity=0.209  Sum_probs=161.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCC-----------cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~-----------~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      +.+++.|+.+... ++|+.+.+++.+. ......|.           ...+++|+.++++++++ +++|++|+|+++++.
T Consensus        16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~   94 (403)
T TIGR01979        16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN   94 (403)
T ss_pred             CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence            4567999888766 4567778887542 11111111           13568999999999998 689999999999999


Q ss_pred             HHHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      .++.++    +++||+|+++++.|+.    +...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||
T Consensus        95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG  173 (403)
T TIGR01979        95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG  173 (403)
T ss_pred             HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence            998875    5789999999998764    345566789999999977778899999999997 6899999999999999


Q ss_pred             cCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      .+++.+++.++++. ++++|+|++|+.....   . .+...+.++++.|++|.+|.+|  +||+++++++++.+.
T Consensus       174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---~-~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~  242 (403)
T TIGR01979       174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---V-DVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMP  242 (403)
T ss_pred             ccCCHHHHHHHHHHcCCEEEEEchhhcCccc---c-CccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCC
Confidence            99999999999987 9999999999753211   1 1223356799999999888666  899999988877653

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.89  E-value=3.3e-22  Score=191.42  Aligned_cols=211  Identities=16%  Similarity=0.128  Sum_probs=160.7

Q ss_pred             eecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 019868           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~  177 (334)
                      |.++.+.++.+..+.     .... ..+|+++...+|++++|++.+  .+++++++|+++++..++.+++++||+|+++.
T Consensus        26 i~~ss~~~~~~~~~~-----~~~~-Y~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~   97 (382)
T TIGR02080        26 IYLSTTYNFTGFNEP-----RAYD-YSRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH   97 (382)
T ss_pred             eeCCceeEeCCcCcc-----CCCc-ccCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence            667776655432211     1111 256788889999999999998  46899999999999999999999999999999


Q ss_pred             CCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEE
Q 019868          178 PTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (334)
Q Consensus       178 p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIv  252 (334)
                      |+|+.+...+    ...|.++..++     ..|++.++++++ +++|+|++++|+||||.+++.+++.++++. ++++|+
T Consensus        98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv  171 (382)
T TIGR02080        98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV  171 (382)
T ss_pred             CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            9998543322    22355665553     237899999997 679999999999999999999999999987 999999


Q ss_pred             ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      |++|..+.... ....    +..++++|+||.++ .+|++.|++++ ++++++.+...+..  .+++++.++.+...|+
T Consensus       172 D~a~~~~~~~~-pl~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~  245 (382)
T TIGR02080       172 DNTFLSPALQN-PLAL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR  245 (382)
T ss_pred             ECCCcccccCC-chhh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence            99998654322 1111    23489999999874 57889999877 67888888766554  4577777777665554

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK06460 hypothetical protein; Provisional

Probab=99.89  E-value=2.5e-22  Score=191.92  Aligned_cols=175  Identities=14%  Similarity=0.175  Sum_probs=137.0

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~G~~v~~v~~~~~  202 (334)
                      .++...+|++++|+++|.+. .+++++| ++++..++.+++++||+|+++.|.|    ..|...++..|+++..++.+  
T Consensus        43 ~~p~~~~L~~~lA~l~g~~~-~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~--  118 (376)
T PRK06460         43 ANPTVLELTKKIVELENAEM-GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG--  118 (376)
T ss_pred             CCccHHHHHHHHHHHhCCCc-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC--
Confidence            56778999999999999854 4655555 6899999999999999999997655    45566777899999888753  


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                         +.+.+++.++ +++|+|++++||||||.+++.+++.++++. ++++|+||+|..+... .  ..  ..+++++++|+
T Consensus       119 ---~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~--~l--~~~~divv~S~  189 (376)
T PRK06460        119 ---SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-K--PL--ELGADIVVHSA  189 (376)
T ss_pred             ---CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-C--hh--hcCCCEEEeec
Confidence               2234444444 689999999999999999999999999987 9999999999754321 1  11  23457999999


Q ss_pred             chhhc-ccccchheeEcCHHHHHHHHHhcCCCCC
Q 019868          282 SKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYNV  314 (334)
Q Consensus       282 SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~~~~  314 (334)
                      ||.|+ ..|.|+||+++++++++.+.+.+..++.
T Consensus       190 sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~  223 (376)
T PRK06460        190 SKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGT  223 (376)
T ss_pred             ceeccCCCCceEEEEecCHHHHHHHHHHHHhcCC
Confidence            99875 2236799999999999999877766554

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.89  E-value=7.6e-22  Score=190.64  Aligned_cols=202  Identities=17%  Similarity=0.200  Sum_probs=158.4

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCC--C----CCC-C----cChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFP--Y----IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDLI  162 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~----~Yp-~----~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~~  162 (334)
                      +++.|+.+... ++|+.+.+++.+ +...  +    .|. .    ...+++|+++|++++. ++++|++|+|+++++..+
T Consensus        23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~  101 (406)
T PRK09295         23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV  101 (406)
T ss_pred             ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH
Confidence            57888877654 356778887754 2111  1    111 0    1145899999999997 678999999999999999


Q ss_pred             HHH----hcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          163 MRC----VLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~----l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +.+    ++++||+|+++++.|++    |...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+
T Consensus       102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~~  180 (406)
T PRK09295        102 ANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGTE  180 (406)
T ss_pred             HHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhccccc
Confidence            886    45899999999988753    455667789999999977777899999999997 689999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ++.+++.++++. ++++++|++|......   . .+...+..+++.|++|.+|.+|  +||+++++++++.+
T Consensus       181 ~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~  246 (406)
T PRK09295        181 NPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEM  246 (406)
T ss_pred             CCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhC
Confidence            999999999987 9999999999754321   1 1123345699999999888666  79999999887654

>PRK02948 cysteine desulfurase; Provisional

Probab=99.89  E-value=2.7e-22  Score=192.04  Aligned_cols=223  Identities=17%  Similarity=0.134  Sum_probs=166.1

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-Cc-C----CCCCCC-----cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LK-F----PYIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~-~----~~~Yp~-----~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      +.|+.+... ++|+.+++++.+ .. .    ...|..     .-..++|+.+|+++|+++++|++++|+++++..++..+
T Consensus         2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~   80 (381)
T PRK02948          2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL   80 (381)
T ss_pred             EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence            455555443 356778887754 21 1    011110     11458899999999999999999999999999988877


Q ss_pred             c----CCCCEEEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          167 L----DPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      +    ++||+|+++...|+.+.   ..++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~  159 (381)
T PRK02948         81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE  159 (381)
T ss_pred             HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence            5    57899999997776544   3456689999999976777899999999986 67899999999999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH-HHHHHH------hcCC
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWR------AKQP  311 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~-i~~l~~------~~~~  311 (334)
                      +.++++. ++++|+|+++. +...+-   .+...+.++++.|++|.||.+|  +|++++++++ +..+..      ...+
T Consensus       160 I~~l~~~~~~~vivD~~~~-~g~~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~  233 (381)
T PRK02948        160 IGALLKKYNVLFHSDCVQT-FGKLPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP  233 (381)
T ss_pred             HHHHHHHcCCEEEEEChhh-cccccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence            9999987 99999996543 332111   1234467799999999999888  7999887664 111110      0134


Q ss_pred             CCCcHHHHHHHHHHhcC
Q 019868          312 YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~  328 (334)
                      ++++.+++.++.++|++
T Consensus       234 ~t~~~~~~~a~~~al~~  250 (381)
T PRK02948        234 GTVNVPGIAAFLTAAEN  250 (381)
T ss_pred             CCccHHHHHHHHHHHHH
Confidence            67899999999988875

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.89  E-value=2.9e-22  Score=191.51  Aligned_cols=228  Identities=19%  Similarity=0.248  Sum_probs=166.1

Q ss_pred             CCCCeeecCCC--CCCCCCC-HHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++..+|||..|  .++++.. |.+.+++.+ +..    ...|+.+...+|+++++++++.+  ++++++|+++++..+++
T Consensus        25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~  102 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGAD--RVFFCNSGAEANEAALK  102 (379)
T ss_pred             CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHH
Confidence            46678999886  5566654 788877764 321    24566666789999999999864  99999999999999888


Q ss_pred             Hhc---C----CCCEEEEcCCCChhHHHHHHHCCCeEEE----eeCCCCCCC----CHHHHHHhcccCCceEEEEeCCCC
Q 019868          165 CVL---D----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       165 ~l~---~----~gd~Vl~~~p~y~~~~~~~~~~G~~v~~----v~~~~~~~~----d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      .+.   .    +||+|++++|+|..+...+...+.....    .+...++..    |++.+++.++ .++++|+++.++|
T Consensus       103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~  181 (379)
T TIGR00707       103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG  181 (379)
T ss_pred             HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence            542   2    3799999999998877766655544321    122122222    8999999986 5789999976677


Q ss_pred             ccccC-CcHHHHHHHHh---C-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          230 PDGSI-INDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       230 PtG~~-~~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      |+|.. ++.+++++|.+   . ++++|+||+|.+|.+.+...  ......++++   +|||.++ +|+|+||++++++++
T Consensus       182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~  257 (379)
T TIGR00707       182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA  257 (379)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence            77764 57666666654   3 89999999999876533221  1222233333   6899999 999999999999999


Q ss_pred             HHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          303 EYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       303 ~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+....  ..++.++++|.++.++|+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~  284 (379)
T TIGR00707       258 EAFTPGDHGSTFGGNPLACAAALAVLE  284 (379)
T ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            9887643  347789999999998886

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.89  E-value=1.4e-21  Score=185.34  Aligned_cols=198  Identities=19%  Similarity=0.177  Sum_probs=157.3

Q ss_pred             CCCCCCHHHHHHHhcCcCCCCCCCcC--hHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Yp~~g--~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      .+.+.++.+.+++.+....++|+...  ..++++.+++++|++++ .+++++|+++++..++.+++++||+|+++.++|.
T Consensus         6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~   85 (356)
T cd06451           6 GPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVF   85 (356)
T ss_pred             CCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCch
Confidence            35567789999987632335566543  67899999999999554 5778888899999999999999999999988776


Q ss_pred             h--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868          182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       182 ~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      .  +...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+.+.+++.++++. ++++++|++|..
T Consensus        86 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~  165 (356)
T cd06451          86 GDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSL  165 (356)
T ss_pred             hHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhc
Confidence            4  5667788999999999766678999999999974489999999999999999999999999987 999999998763


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      ..   ..... ...+..+++.|.+|.++.+ .++||++++++.++.+.+
T Consensus       166 g~---~~~~~-~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~  209 (356)
T cd06451         166 GG---EPFRM-DEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKK  209 (356)
T ss_pred             cC---ccccc-cccCccEEEecCchhccCC-CCcceeEECHHHHHHHHh
Confidence            21   11111 1223347788999998743 468999999998887764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.89  E-value=8.2e-22  Score=188.84  Aligned_cols=192  Identities=17%  Similarity=0.160  Sum_probs=154.3

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHHHH---HHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~G~~v~~v~~  199 (334)
                      .+||++....|++++|++.+.  +++++++|+++++..++.+++++||+|++++|+|+. |....   ...|.++..++ 
T Consensus        47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  123 (386)
T PRK08045         47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-  123 (386)
T ss_pred             eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence            567888899999999999984  479999999999999999999999999999999985 43322   22445666653 


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                          ..|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+||+|...... .+..    ....+++
T Consensus       124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl~----~gaDivv  193 (386)
T PRK08045        124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPLA----LGADLVL  193 (386)
T ss_pred             ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cchh----hCCCEEE
Confidence                358999999997 689999999999999999999999999987 9999999999865432 1222    1224999


Q ss_pred             cCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|++|.++ ..|.+.|++++ ++++++.+...+..  .+++++.++.+...|+.
T Consensus       194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t  247 (386)
T PRK08045        194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT  247 (386)
T ss_pred             eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc
Confidence            99999874 56678999987 57888877655544  45788999988888875

>PLN02721 threonine aldolase

Probab=99.89  E-value=4.7e-22  Score=188.04  Aligned_cols=209  Identities=21%  Similarity=0.183  Sum_probs=150.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC--cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGD  171 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-~gd  171 (334)
                      ..+++|+.|++++ +++.+++++...  .....|+++...+||+++|++++.+. .+++++| ++++..++..+++ +||
T Consensus         5 ~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~G-s~a~~~~l~~~~~~~gd   81 (353)
T PLN02721          5 SRVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA-ALFVPSG-TMGNLISVLVHCDVRGS   81 (353)
T ss_pred             hhhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce-eEEecCc-cHHHHHHHHHHccCCCC
Confidence            3478999999997 678888888753  33334555558899999999999753 3444445 5555567776777 999


Q ss_pred             EEEEcCCCChh-HHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCceEEEEeC-CCCccccCCcHHHHH
Q 019868          172 KIVDCPPTFTM-YEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLL  241 (334)
Q Consensus       172 ~Vl~~~p~y~~-~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~~i~l~~-p~NPtG~~~~~~~l~  241 (334)
                      +|++++|+|.. |..  .+...|++++.++.++++.+|++++++.+++      +++++|++++ +|||||.+++.++++
T Consensus        82 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~  161 (353)
T PLN02721         82 EVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTD  161 (353)
T ss_pred             eEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHH
Confidence            99999999853 432  5667899999998777788999999999863      3789999986 588999999987666


Q ss_pred             HHHh---C-CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchhe-eEcCHHHHHHHHHhcCC
Q 019868          242 KILE---M-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       242 ~l~~---~-~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~-l~~~~~~i~~l~~~~~~  311 (334)
                      +|++   . |+++|+||+|.....   ...........+  .++.|+||.|+.   ++|| +++++++++.+...+..
T Consensus       162 ~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~  234 (353)
T PLN02721        162 KVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKT  234 (353)
T ss_pred             HHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHh
Confidence            6654   4 899999999863221   111111222233  445579998863   3565 66789999887766554

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.89  E-value=1.3e-21  Score=190.09  Aligned_cols=204  Identities=21%  Similarity=0.233  Sum_probs=158.9

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-C---CCC---CCCc----ChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~---~~~---Yp~~----g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~  161 (334)
                      .+++.|+.+... ++|+.+.+++.+ +. .   ...   |...    ...++|+++|++++++ +++|++|+|+++++..
T Consensus        31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~  109 (424)
T PLN02855         31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL  109 (424)
T ss_pred             CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence            457999886654 566778888755 21 1   111   2111    2468999999999985 5799999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++..+    +++||+|+++.+.|+.    |...++..|++++.++.+.++.+|++++++.++ +++++|++++|+||||.
T Consensus       110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~  188 (424)
T PLN02855        110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS  188 (424)
T ss_pred             HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence            98863    5899999999998863    455667789999999876666799999999997 58999999999999999


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      +++.+++.++++. ++++|+|++|....   .... +...+..+++.|++|.+|.+|  +||+++++++++.+.
T Consensus       189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~~-~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~  256 (424)
T PLN02855        189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPVD-VQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMP  256 (424)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCCC-chhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCC
Confidence            9999999999987 99999999996321   1111 223345688999999777555  899999998877653

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.89  E-value=3.3e-21  Score=184.24  Aligned_cols=225  Identities=19%  Similarity=0.179  Sum_probs=165.8

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-CcC-CC---CC-----CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LKF-PY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~~-~~---~Y-----p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      .++++|||..|++ .+.++|++++++.+ +.. ..   .|     +..-..+++++++++++. ++.|++++|+ +++..
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~g~-~~~~~  114 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSSGY-AANLA  114 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence            5678999999875 35567889888765 221 11   11     122357899999999984 4556655555 55556


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++..++++||+|++++|+|+.+...++..|++++.++.     .|++.+++.++..  ++.++++.+++||||...+.++
T Consensus       115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~  189 (385)
T PRK05958        115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE  189 (385)
T ss_pred             HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence            77778999999999999999999888889999988864     3788999888642  3455665688999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCC--CC-chh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~-  312 (334)
                      +.++++. ++++|+||+|..+...  +. ...  .+...++++++.||||.||++|   ||+++++++++.+.+....+ 
T Consensus       190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~  266 (385)
T PRK05958        190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI  266 (385)
T ss_pred             HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence            9999997 9999999999764322  11 111  1234567899999999998777   99999999988876554332 


Q ss_pred             ---CCcHHHHHHHHHHhc
Q 019868          313 ---NVSVAAEVAACAALQ  327 (334)
Q Consensus       313 ---~~~~~~q~aa~~~L~  327 (334)
                         ..++..+.++.++|+
T Consensus       267 ~~~~~~~~~~aa~~aal~  284 (385)
T PRK05958        267 FTTALPPAQAAAARAALR  284 (385)
T ss_pred             ecCCCCHHHHHHHHHHHH
Confidence               345666666666665

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.88  E-value=2.3e-21  Score=186.14  Aligned_cols=209  Identities=21%  Similarity=0.204  Sum_probs=165.7

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcCcC--C------CCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++|+|+--.---++++.+++++.+...  .      +.+.   .+...++|+.+|+++|++  ++++++|+++++..+
T Consensus        17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a   94 (387)
T PRK09331         17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV   94 (387)
T ss_pred             cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence            35577776544444567888888876311  1      1111   224689999999999974  688899999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc------CCceEEEEeCCCCccccC
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~  234 (334)
                      +.+++++||+|+++.++|......++..|++++.++.  ++++.+|++++++.+++      +++++|++++|+|+||..
T Consensus        95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~  174 (387)
T PRK09331         95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL  174 (387)
T ss_pred             HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence            9999999999999999988776678889999999997  56788999999998863      268999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      .+.+++.++++. ++++|+|++|+........    ...+..+++.|++|.++ .+.|+||+++++++++.+.+..
T Consensus       175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~~----~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~  245 (387)
T PRK09331        175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDG----KKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTS  245 (387)
T ss_pred             ccHHHHHHHHHHcCCEEEEECCcccCCcCCCH----HHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhccccc
Confidence            999999999987 9999999999843211111    12345689999999987 5569999999999998876653

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.88  E-value=7.5e-22  Score=182.81  Aligned_cols=203  Identities=17%  Similarity=0.230  Sum_probs=166.4

Q ss_pred             CCC-CCcChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEE
Q 019868          124 YIY-PDPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~  195 (334)
                      .+| +..|.++|+..+.++.+      ...+ +|++|+|.+.++..+++.++++||.|++...+|+.-....+..|++++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i  173 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII  173 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence            567 56799999999999875      1122 899999999999999999999999999999999988888888999999


Q ss_pred             EeeCCCCCCCCHHHHHHhccc--------CCceEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCC
Q 019868          196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL  262 (334)
Q Consensus       196 ~v~~~~~~~~d~~~l~~~l~~--------~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~  262 (334)
                      +|++++ .++++|.+++.+.+        ++++++|.. +-+||||..++.+..++|.++    +++||+||.|.-+.+.
T Consensus       174 pv~md~-~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~  252 (472)
T KOG0634|consen  174 PVKMDQ-DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN  252 (472)
T ss_pred             eccccC-CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence            999854 48999999998753        346677755 669999999999998887664    9999999999876543


Q ss_pred             C--------C-c------h-------hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHH
Q 019868          263 E--------S-R------M-------EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA  318 (334)
Q Consensus       263 ~--------~-~------~-------~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~  318 (334)
                      .        . .      .       -..+-.+|+|-..||||.++ ||+|+||+.+++-+++++.+....  .+++.+.
T Consensus       253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s  331 (472)
T KOG0634|consen  253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS  331 (472)
T ss_pred             ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence            1        0 0      0       01234689999999999987 999999999999999988877665  4578888


Q ss_pred             HHHHHHHhcC
Q 019868          319 EVAACAALQN  328 (334)
Q Consensus       319 q~aa~~~L~~  328 (334)
                      |.+..+.|+.
T Consensus       332 q~iv~a~l~~  341 (472)
T KOG0634|consen  332 QGIVYAMLKR  341 (472)
T ss_pred             HHHHHHHHHH
Confidence            8888888775

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.88  E-value=4.3e-21  Score=183.83  Aligned_cols=225  Identities=18%  Similarity=0.209  Sum_probs=165.6

Q ss_pred             CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CC---CCC-CCcChHHHHHH----HHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FP---YIY-PDPESRRLRAA----LAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~---~~Y-p~~g~~~lr~~----lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++++++||+.++ ..++++|.+.+++.+ +. ..   ..| +..|..+++++    ++++++. ++.|++++|++ ++..
T Consensus        31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~-a~~~  108 (385)
T TIGR01825        31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFN-TNQG  108 (385)
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHH-HHHH
Confidence            567899999886 577788888887665 22 21   234 23354555554    4455564 45788888855 5557


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ++..++++||.|++++|+|+.+...+...|++++.++     .+|++++++.+++   +++++|++++++||||.+.+.+
T Consensus       109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~  183 (385)
T TIGR01825       109 VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLP  183 (385)
T ss_pred             HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHH
Confidence            7788899999999999999998877778888887764     4678888887653   3678888889999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCC--CC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~-  312 (334)
                      ++.++++. ++++|+||+|..+...  +. .....+ ..+++++++||||.||++|   ||+++++++++.+.+....+ 
T Consensus       184 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~  260 (385)
T TIGR01825       184 EIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPFL  260 (385)
T ss_pred             HHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCcccc
Confidence            99999987 9999999999876432  11 111111 2567899999999998766   99999999999887665432 


Q ss_pred             ---CCcHHHHHHHHHHhc
Q 019868          313 ---NVSVAAEVAACAALQ  327 (334)
Q Consensus       313 ---~~~~~~q~aa~~~L~  327 (334)
                         ..+++.+.++.++|+
T Consensus       261 ~~~~~~~~~~~a~~~al~  278 (385)
T TIGR01825       261 FSTAQPPAVVAALAAAVD  278 (385)
T ss_pred             ccCCCCHHHHHHHHHHHH
Confidence               235666777777664

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.88  E-value=1.2e-21  Score=189.43  Aligned_cols=224  Identities=20%  Similarity=0.183  Sum_probs=163.2

Q ss_pred             CCeeecCCC-CCCCCCCHHHHHHHhc-Cc-CC-------CCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+.++++.+ .++++++|.+++++.+ +. .+       ..|+.. ...+|++++|+++|. ++.|++++|+ ++...++
T Consensus        46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i  123 (410)
T PRK13392         46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL  123 (410)
T ss_pred             ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence            446666655 6799999999988765 22 21       123333 467999999999995 5778888886 5555666


Q ss_pred             HHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHH
Q 019868          164 RCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ..+.  .+||.|+++...|..+...++..|+++..++.+     |.+.+++.++   .+++++|++++|+||||.+++.+
T Consensus       124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~  198 (410)
T PRK13392        124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE  198 (410)
T ss_pred             HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence            6554  488988888778887777778889988777532     3444444432   25789999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCC--CCch-hhhcCCCc-EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~~~-~~~~~~~~-~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~-  312 (334)
                      ++.++++. ++++|+||+|....++  +... ...+..++ .++++||||.||++|   ||+++++++++.+++....+ 
T Consensus       199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~  275 (410)
T PRK13392        199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI  275 (410)
T ss_pred             HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence            99999987 9999999999843321  1111 11111122 488999999999988   99999999999888777543 


Q ss_pred             ---CCcHHHHHHHHHHhcC
Q 019868          313 ---NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ---~~~~~~q~aa~~~L~~  328 (334)
                         ..+++.+.++.++|+.
T Consensus       276 ~s~~~~~~~~~a~~aaL~~  294 (410)
T PRK13392        276 FTTALPPAVAAGATAAIRH  294 (410)
T ss_pred             ccCcCCHHHHHHHHHHHHH
Confidence               3566788888888865

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.88  E-value=2.8e-21  Score=186.70  Aligned_cols=213  Identities=15%  Similarity=0.153  Sum_probs=160.7

Q ss_pred             CCCCCCeeecCCCCC--CCCCCH---HHHHH-HhcCc-CCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANEN--PYGPPP---EVREA-LGQLK-FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~~~~---~v~~a-l~~~~-~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ...+-+.+.|..++.  ++..+.   .+.++ +..+. ....| ++.|..+|+++++++++.  +++++++|+++++..+
T Consensus         7 ~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la   84 (431)
T cd00617           7 KEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL   84 (431)
T ss_pred             HHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence            335567788888887  666552   44332 33332 22458 677999999999999996  4899999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC----------CCCCCHHHHHHhcccC---CceEEEEeCCCC
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN  229 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~----------~~~~d~~~l~~~l~~~---~~~~i~l~~p~N  229 (334)
                      +.++++|||+| +++|.|..|...+...|++++.++.+.          .+.+|++++++++++.   ++++|++++|||
T Consensus        85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N  163 (431)
T cd00617          85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN  163 (431)
T ss_pred             HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence            99999999987 689999999999999999999998542          2459999999999732   378999999999


Q ss_pred             cc-ccCCcHHHHHHHHhC----CCeEEEccCCcCc--cC-----CCCchhhhcCCCcEEEEcCCchhhcccccc------
Q 019868          230 PD-GSIINDEDLLKILEM----PILVVLDEAYTEF--SG-----LESRMEWVKKHDNLIVLRTFSKRAGLAGLR------  291 (334)
Q Consensus       230 Pt-G~~~~~~~l~~l~~~----~~~lIvDeay~~~--~~-----~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R------  291 (334)
                      |+ |.+++.++++++.++    +++||+|++..-.  .+     ++.....+  .+.++.+.|++|.+.++|+|      
T Consensus       164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si--~ei~~e~~s~sd~~~mS~~K~~~~~~  241 (431)
T cd00617         164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI--AEIAREMFSYADGCTMSAKKDGLVNI  241 (431)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH--HHHHHHhhccCCEEEEEeecCCCCcc
Confidence            98 999999887666553    9999999994321  11     11000001  12245678899999999998      


Q ss_pred             hheeEcCH-HHHHHHHHh
Q 019868          292 VGYGAFPL-SIIEYLWRA  308 (334)
Q Consensus       292 ~G~l~~~~-~~i~~l~~~  308 (334)
                      .||+++++ +++++++..
T Consensus       242 GG~i~~~d~~l~~~~~~~  259 (431)
T cd00617         242 GGFLALRDDELYEEARQR  259 (431)
T ss_pred             ceEEEeCcHHHHHHHHHh
Confidence            56999976 688888754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.88  E-value=2.3e-21  Score=186.40  Aligned_cols=191  Identities=15%  Similarity=0.155  Sum_probs=152.5

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~  200 (334)
                      +|+++...+|++.+|++.|.+  +.++++++++++..++.+++++||+|+++.|+|....    ..+...|+++..++. 
T Consensus        60 r~~~p~~~~le~~lA~l~g~~--~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-  136 (398)
T PRK08249         60 RNTNPTVQAFEEKVRILEGAE--AATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET-  136 (398)
T ss_pred             CCCChHHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-
Confidence            457777899999999999953  4666677789999999989999999999999998643    334568998887752 


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..+.... ...    ....++++
T Consensus       137 ----~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l~----~~~Divv~  206 (398)
T PRK08249        137 ----GDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PLA----LGADLVIH  206 (398)
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-chh----hCCCEEec
Confidence                58999999997 689999999999999999999999999987 99999999998654322 111    23348889


Q ss_pred             CCchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       280 S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      |+||.++.+|.++ ||+++++++++.++..+..  ..++++.++.+...|+.
T Consensus       207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t  258 (398)
T PRK08249        207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT  258 (398)
T ss_pred             cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch
Confidence            9999998677776 7777788998888766554  45677777777666653

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.88  E-value=2.9e-21  Score=186.21  Aligned_cols=192  Identities=16%  Similarity=0.188  Sum_probs=152.8

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|+++|.+  +.++++++++++..++..++++||+|+++.|.|..    +...+...|+++..++.
T Consensus        60 ~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  137 (403)
T PRK07503         60 SRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL  137 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence            4467778899999999999974  34556677789999998899999999999998864    23345568999998875


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      .     |+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.    ..+..+++
T Consensus       138 ~-----d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l----~~g~Di~v  206 (403)
T PRK07503        138 T-----DPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPL----ELGADLVV  206 (403)
T ss_pred             C-----CHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCCEEE
Confidence            2     7899999997 589999999999999999999999999987 9999999999864332 111    12345999


Q ss_pred             cCCchhhcccc-cchheeEcCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~--~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||.++.+| .|.|+++.+++++++++..  +..  ..++++.++.+...|+.
T Consensus       207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t  261 (403)
T PRK07503        207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT  261 (403)
T ss_pred             ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch
Confidence            99999998765 7889999889988887632  322  56788888777776664

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.88  E-value=4.3e-21  Score=184.65  Aligned_cols=204  Identities=19%  Similarity=0.159  Sum_probs=157.8

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcC-----CCCCCCc-C----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKF-----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~Yp~~-g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .+.|+.+... ++|+.+++++.+ +..     ...|+.. +    ..++|+.+++++++++++|++++|+++++..++.+
T Consensus        18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~   96 (397)
T TIGR01976        18 RVFFDNPAGT-QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA   96 (397)
T ss_pred             eEEecCCccC-CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence            5888776554 356777777654 211     1235432 2    46899999999999888899999999999888776


Q ss_pred             h---cCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +   +++||+|+++++.|...    ...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+.+.
T Consensus        97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~  175 (397)
T TIGR01976        97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL  175 (397)
T ss_pred             HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence            5   58999999999988653    345677899999998653 67899999999997 679999999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++.++++. ++++|+|+++....    ....+.+.+..+++.|++|.+   |+|+||+++++++++.+....
T Consensus       176 ~~i~~~~~~~~~~~ivD~a~~~~~----~~~~~~~~~~d~~~~s~~K~~---g~~~G~l~~~~~~~~~l~~~~  241 (397)
T TIGR01976       176 AAITELVHAAGALVVVDAVHYAPH----GLIDVQATGADFLTCSAYKFF---GPHMGILWGRPELLMNLPPYK  241 (397)
T ss_pred             HHHHHHHHHcCCEEEEehhhhccc----cCCCHHHcCCCEEEEechhhc---CCceEEEEEcHHHHhhCCCcc
Confidence            999999987 99999999975211    111122334557789999976   457999999999888776543

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.87  E-value=8.2e-21  Score=179.16  Aligned_cols=222  Identities=22%  Similarity=0.177  Sum_probs=162.7

Q ss_pred             eeecCCCCC-CCCCCHHHHHHHhc-Cc-CCC---CC----C-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           97 IVKIDANEN-PYGPPPEVREALGQ-LK-FPY---IY----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        97 ~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~---~Y----p-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      +++|+.++. ..+.+|++.+++++ ++ ..+   .|    . .+...+++++++++++.+ +.| +++++++++..++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i-v~~sg~~a~~~~~~~   80 (349)
T cd06454           3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-AAL-VFSSGYAANDGVLST   80 (349)
T ss_pred             ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-CEE-EeccHHHHHHHHHHH
Confidence            566766543 44556889988876 32 111   12    1 223578999999999974 444 445556787777888


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc----CCceEEEEeCCCCccccCCcHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++||+|++++|.|+.+...++..|++++.++.     +|++.+++.+++    .+++++++++++||||...+.+++.
T Consensus        81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~  155 (349)
T cd06454          81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV  155 (349)
T ss_pred             hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence            8899999999999999988888889999988762     477788887763    3578888889999999999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCC--CCchhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC----C
Q 019868          242 KILEM-PILVVLDEAYTEFSGL--ESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~--~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~----~  312 (334)
                      ++++. ++++|+|++|......  ......  ....+++++++|+||.|+++|   ||+++++++++.+......    .
T Consensus       156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~  232 (349)
T cd06454         156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST  232 (349)
T ss_pred             HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence            99988 9999999999743221  111111  123467899999999998655   9999999988887665443    2


Q ss_pred             CCcHHHHHHHHHHhcC
Q 019868          313 NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ~~~~~~q~aa~~~L~~  328 (334)
                      ..+...+.++.++|+.
T Consensus       233 ~~~~~~~~a~~~~l~~  248 (349)
T cd06454         233 SLPPAVAAAALAALEV  248 (349)
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            4566666676776653

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.87  E-value=2.7e-21  Score=186.12  Aligned_cols=192  Identities=19%  Similarity=0.202  Sum_probs=149.9

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|+++|.+..  +++++++.++..++.+++++||+|+++.|.|+.+...    +...|++++.++ 
T Consensus        60 ~r~~~p~~~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-  136 (398)
T PRK07504         60 SRYSNPTVDMFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD-  136 (398)
T ss_pred             ecCCCchHHHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-
Confidence            457888899999999999998654  3456667788877777889999999999999865443    345799988885 


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                          .+|+++++++++ +++|+|++++|+||||.+++.+++.++++. ++++|+|++|..+... ...    ..+.++++
T Consensus       137 ----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~----~~gaDivv  206 (398)
T PRK07504        137 ----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPL----ELGAHIVV  206 (398)
T ss_pred             ----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-Cch----hhCCCEEE
Confidence                368999999997 689999999999999999999999999987 9999999999865432 111    22456899


Q ss_pred             cCCchhhcccccchh-eeEcCHHHHHH-HHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G-~l~~~~~~i~~-l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      .|++|.|+.+|+|+| +++.+++.+.. +.....  ...++++.++++...|+.
T Consensus       207 ~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t  260 (398)
T PRK07504        207 YSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET  260 (398)
T ss_pred             eeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch
Confidence            999999998999996 56667766643 332222  245777777777776664

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.87  E-value=4e-21  Score=184.50  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=148.5

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKS  201 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~  201 (334)
                      |+++...+|++.+|+++|.  +++++++|+++++..++.+++++||+|+++.+.|+...    ..+...|++++.++.+ 
T Consensus        58 ~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-  134 (390)
T PRK08133         58 FTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-  134 (390)
T ss_pred             CCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-
Confidence            4556688999999999985  46889999999999999999999999999999886533    3455689999998752 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                          |+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|....... +.    ..+..++++|
T Consensus       135 ----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~S  204 (390)
T PRK08133        135 ----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIHS  204 (390)
T ss_pred             ----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEee
Confidence                7899999997 689999999999999999999999999987 99999999986544321 11    1233588999


Q ss_pred             Cchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHh
Q 019868          281 FSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAAL  326 (334)
Q Consensus       281 ~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L  326 (334)
                      +||.++.+|.|+ ||++++++.++.+.+....  ..+++..+..+...+
T Consensus       205 ~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl  253 (390)
T PRK08133        205 ATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGL  253 (390)
T ss_pred             cceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHccc
Confidence            999999899998 5667788877766544333  345666655554443

>PLN02822 serine palmitoyltransferase

Probab=99.87  E-value=1.4e-20  Score=185.27  Aligned_cols=225  Identities=16%  Similarity=0.169  Sum_probs=169.3

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCC-------C-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~-------Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++++++||..+.. .+..+|++++++.+ +. ++.+       | +..+..+|+++||++++. ++.|++++|.+ ++..
T Consensus       107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s  184 (481)
T PLN02822        107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS  184 (481)
T ss_pred             CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence            4678899998744 67788999888765 32 2222       3 334578999999999995 57899998887 5678


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---c-----CCc-eEEEEeCCCCccc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG  232 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~-----~~~-~~i~l~~p~NPtG  232 (334)
                      ++.+++++||.|++....|..+...+...|.+++.++.+     |.+.++..++   .     +++ ++|+++.++|+||
T Consensus       185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G  259 (481)
T PLN02822        185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG  259 (481)
T ss_pred             HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence            888899999999988888888877788889999998853     3333333332   1     234 6888889999999


Q ss_pred             cCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCc---hhhh--cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~---~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      .+.+.+++.++++. ++++|+||+|..+..+...   ....  ...+.++++.||||.||++|   ||+++++++++.++
T Consensus       260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~  336 (481)
T PLN02822        260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR  336 (481)
T ss_pred             CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence            99999999999987 9999999999865543211   1111  11356799999999999999   99999999999887


Q ss_pred             HhcCC--CC--CcHHHHHHHHHHhc
Q 019868          307 RAKQP--YN--VSVAAEVAACAALQ  327 (334)
Q Consensus       307 ~~~~~--~~--~~~~~q~aa~~~L~  327 (334)
                      .....  |+  .++..+.++.++|+
T Consensus       337 ~~~~~~~fsa~lPp~~~~Aa~~aL~  361 (481)
T PLN02822        337 LSSSGYVFSASLPPYLASAAITAID  361 (481)
T ss_pred             hcCCceeeccccCHHHHHHHHHHHH
Confidence            55443  44  34777888877775

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.87  E-value=5.4e-21  Score=183.60  Aligned_cols=192  Identities=15%  Similarity=0.142  Sum_probs=151.5

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|+++|.+  ..++++++++++..++.+++++||+|+++.|.|+.    +...+...|+++..++.
T Consensus        54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~  131 (391)
T TIGR01328        54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM  131 (391)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence            4567888899999999999965  36677777889999999899999999999998863    34445568999998875


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      +     |+++++++++ +++++|++++|+||+|.+.+.+++.++++. ++++|+|++|....... ..    .....+++
T Consensus       132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv  200 (391)
T TIGR01328       132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV  200 (391)
T ss_pred             C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence            3     7899999987 689999999999999999999999999987 99999999998543321 11    22345899


Q ss_pred             cCCchhhcccccc-hheeEcCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R-~G~l~~~~~~i~~l~~~~~--~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||.+|.+|.+ .|++++++++++.+++...  .  ..+++...+++...|+.
T Consensus       201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t  255 (391)
T TIGR01328       201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT  255 (391)
T ss_pred             ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc
Confidence            9999999988887 5778888998888775321  2  34566666666665653

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.87  E-value=4.8e-21  Score=182.63  Aligned_cols=190  Identities=17%  Similarity=0.183  Sum_probs=150.9

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|++.|.+.  .++++|+++++..++ .++++||+|++++|.|+.    +...+...|++++.++.
T Consensus        47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  123 (366)
T PRK08247         47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT  123 (366)
T ss_pred             cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence            45788889999999999999754  466777788998876 478999999999999985    34445568999998874


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||+|...+.+++.++++. ++++|+||+|....... +.    ..+.++++
T Consensus       124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i  192 (366)
T PRK08247        124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI  192 (366)
T ss_pred             -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence                 38899999997 589999999999999999999999999987 99999999995322211 11    23567999


Q ss_pred             cCCchhhcc-cccchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl-~G~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +|+||.++- .+.+.|+++++ +++++.+...+..  ..++++.|+++...|+
T Consensus       193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~  245 (366)
T PRK08247        193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK  245 (366)
T ss_pred             eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence            999998863 35689999996 6787877655544  4577888888877765

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.87  E-value=8.8e-21  Score=181.64  Aligned_cols=191  Identities=17%  Similarity=0.189  Sum_probs=152.5

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++.+++++|.  +++++++++++++..++.+++++||+|+++.+.|+.    +...+...|++++.++.
T Consensus        49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~  126 (380)
T TIGR01325        49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP  126 (380)
T ss_pred             ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence            457777789999999999986  468889999999999999999999999999988864    33456678999998875


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      +     |+++++++++ +++++|++++|+||+|.+.+.+++.++++. ++++|+|++|..+..... .    ..+..+++
T Consensus       127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l----~~g~Divv  195 (380)
T TIGR01325       127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-L----KLGADVVV  195 (380)
T ss_pred             C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCCCEEE
Confidence            3     7899999886 689999999999999999999999999987 999999999986543221 1    22446899


Q ss_pred             cCCchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      .|++|.++.+|.++ |++++++++++.+.+....  ..+++....++...++
T Consensus       196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~  247 (380)
T TIGR01325       196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLE  247 (380)
T ss_pred             eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccC
Confidence            99999998788886 7788888888887765543  2345555555544444

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.87  E-value=2.1e-21  Score=188.14  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=136.9

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|+++|.  +..++++++++++..++.+++++||+|+++.+.|+.    +...+...|++++.++.
T Consensus        52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~  129 (418)
T TIGR01326        52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP  129 (418)
T ss_pred             ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence            455777789999999999995  467888899999999998899999999999999864    34456678999999874


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      +     |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+   . ..+.++++
T Consensus       130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~---l-~~g~Divv  198 (418)
T TIGR01326       130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RP---I-DHGADIVV  198 (418)
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-Cc---h-hcCCeEEE
Confidence            2     7899999997 689999999999999999999999999987 9999999999743211 11   1 23568999


Q ss_pred             cCCchhhcccccchheeEcCH
Q 019868          279 RTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +|+||.++.+|+|+||+++++
T Consensus       199 ~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       199 HSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             ECccccccCCccceEEEEEec
Confidence            999999999999999999854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.87  E-value=1.3e-20  Score=180.36  Aligned_cols=192  Identities=17%  Similarity=0.140  Sum_probs=151.9

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHHH---HHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~G~~v~~v~~  199 (334)
                      .+|+++....|++++|++.|  .+++++++|+++++..++.+++++||+|+++.|+|+. +...   ....|+++..++.
T Consensus        48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~  125 (388)
T PRK08861         48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ  125 (388)
T ss_pred             cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence            55688889999999999999  4799999999999999999999999999999999985 4322   2335788888752


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+|++|.......+ .    ..+-.+++
T Consensus       126 -----~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~p-l----~~GaDivv  194 (388)
T PRK08861        126 -----SDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKP-L----ELGADFVI  194 (388)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCC-c----ccCCCEEE
Confidence                 48899999987 589999999999999999999999999987 999999999986443211 1    22345999


Q ss_pred             cCCchhhcc-cccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl-~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|++|.++- .+.+.|++++ ++++.+.++..+..  ..++++..+.+...|+.
T Consensus       195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T  248 (388)
T PRK08861        195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT  248 (388)
T ss_pred             eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC
Confidence            999998753 3577899987 45677767655544  34667766666665553

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=1.3e-20  Score=181.64  Aligned_cols=192  Identities=18%  Similarity=0.192  Sum_probs=150.7

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++....|++.+|++.|. ++++++++| ++++.+++.+++++||+|+++.|.|+.    +...+...|.+++.++.
T Consensus        55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~  132 (405)
T PRK08776         55 TRSGNPTRDLLGEALAELEGG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL  132 (405)
T ss_pred             cCCCChHHHHHHHHHHHHhCC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence            456777788999999999996 455655555 799999999999999999999999986    44555667888888864


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.    ..+..+++
T Consensus       133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv  201 (405)
T PRK08776        133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL  201 (405)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence                 37899999987 689999999999999999999999999987 9999999999753221 111    12334999


Q ss_pred             cCCchhhccc-ccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~-G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|.+|.++.+ +...|++++ ++++.+++......  ++++++.++++...++.
T Consensus       202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t  255 (405)
T PRK08776        202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRT  255 (405)
T ss_pred             ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCc
Confidence            9999998655 577899877 57777777654443  45788888887776664

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.86  E-value=1e-20  Score=182.30  Aligned_cols=192  Identities=16%  Similarity=0.150  Sum_probs=153.4

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|++.|.+  +.+++++++.++..++.+++++||+|+++...|    ..+...++..|++++.++.
T Consensus        65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~  142 (403)
T PRK07810         65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG  142 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence            4578888899999999999954  677777778898888888999999999987555    4455666778999999873


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|........ .    ..+.++++
T Consensus       143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv  211 (403)
T PRK07810        143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV  211 (403)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence                 38899999997 689999999999999999999999999987 999999999985543221 1    22456999


Q ss_pred             cCCchhhcccccch-heeEcCHHHHH-HHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~-G~l~~~~~~i~-~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|++|.++..|.++ |+++++++.+. .++.....  ..++++.++++...|+.
T Consensus       212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t  265 (403)
T PRK07810        212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET  265 (403)
T ss_pred             ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc
Confidence            99999998889997 88888877664 34433222  46788888888777764

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.86  E-value=1.7e-20  Score=178.97  Aligned_cols=171  Identities=20%  Similarity=0.137  Sum_probs=142.4

Q ss_pred             hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCC
Q 019868          131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~  202 (334)
                      ..++|+.++++++++ +++|++++|+++++..++.++..   +||+|++++++|+..    ...++..|++++.++.+++
T Consensus        45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~  124 (373)
T cd06453          45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD  124 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence            457999999999987 78999999999999999999887   899999999999863    3445568999999997777


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      +.+|++++++.+. +++++|++++|+||||.+.+.+++.++++. ++++++|++|.......    .+...+..+++.|+
T Consensus       125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~----~~~~~~~d~~~~s~  199 (373)
T cd06453         125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPV----DVQDLGCDFLAFSG  199 (373)
T ss_pred             CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceee----eccccCCCEEEecc
Confidence            8899999999997 589999999999999999999999999987 99999999987432111    11122345778899


Q ss_pred             chhhcccccchheeEcCHHHHHHHHHh
Q 019868          282 SKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      +|.++.  .++||+++++++++.+...
T Consensus       200 ~K~~~~--~g~g~~~~~~~~~~~~~~~  224 (373)
T cd06453         200 HKMLGP--TGIGVLYGKEELLEEMPPY  224 (373)
T ss_pred             ccccCC--CCcEEEEEchHHhhcCCCe
Confidence            998874  6689999999988876643

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.86  E-value=1.5e-20  Score=180.38  Aligned_cols=192  Identities=16%  Similarity=0.134  Sum_probs=146.2

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++.+|+++|.+ +.|++++| +.++..++.+++++||+|+++.|.|+.....    ....|+++..++.
T Consensus        56 ~r~~~pt~~~Le~~lA~l~G~~-~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~  133 (386)
T PRK06767         56 SRLGNPTVKLFEERMAVLEGGE-EALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM  133 (386)
T ss_pred             cCCCCcchHHHHHHHHHHhCCC-cEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence            4568888899999999999953 45555545 5789899888999999999999988754433    3335666655542


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|.......+ .    ..+..+++
T Consensus       134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~p-l----~~g~Div~  202 (386)
T PRK06767        134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRP-L----ELGCDAVV  202 (386)
T ss_pred             -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCcEEE
Confidence                 37899999987 689999999999999999999999999987 999999999964332211 1    12345889


Q ss_pred             cCCchhhcccccch-heeEcCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~-~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|+||.++.+|.|+ ||++++++.++.+.+. ...  ..++++.++++...|+.
T Consensus       203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t  256 (386)
T PRK06767        203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT  256 (386)
T ss_pred             ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc
Confidence            99999998889885 8999998888765432 222  23567777777666654

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.86  E-value=8e-21  Score=183.01  Aligned_cols=226  Identities=21%  Similarity=0.231  Sum_probs=165.6

Q ss_pred             CCCCCeeecCCC--CCCCCC-CHHHHHHHhc-Cc----CCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~----~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~  162 (334)
                      .++++++|+..+  .+.++. +|++.+++.+ +.    ....|+.+...+|.+.++++++.+ +++|++++|+++++..+
T Consensus        40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a  119 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA  119 (398)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence            457788999876  456666 6888888765 22    124576655678999999998853 47999999999999999


Q ss_pred             HHHhcCCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      ++....+| ++|+..+++|..+...+.. .|.            ++..+|.     .|++.+++.+. +++++|+++.++
T Consensus       120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~-~~~~aviiep~~  193 (398)
T PRK03244        120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVD-DDTAAVFLEPIQ  193 (398)
T ss_pred             HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhc-CCeEEEEEeccc
Confidence            99766566 5677777888766544332 222            1222221     37899999885 578999999999


Q ss_pred             CccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       229 NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ||+|.+++    .+++.++++. ++++|+||+|.+|...+...  ...+..+++   .+|||.++ +|+|+||+++++++
T Consensus       194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~  269 (398)
T PRK03244        194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA  269 (398)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence            99999997    5577777776 99999999998876433222  111112232   37899999 89999999999998


Q ss_pred             HHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          302 IEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       302 i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++.+...  ...|+.+++++.++.++|+
T Consensus       270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~  297 (398)
T PRK03244        270 ADLLTPGLHGSTFGGNPVACAAALAVLD  297 (398)
T ss_pred             HhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence            8877653  2347889999999999965

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=2.2e-20  Score=179.51  Aligned_cols=192  Identities=17%  Similarity=0.127  Sum_probs=151.6

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|++.|.  +++++++|+++++..++.+++++||+|++++|+|..+..    .+...|++++.++.
T Consensus        60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~  137 (394)
T PRK07050         60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP  137 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence            456888889999999999994  589999999999999999999999999999999997653    45668999998864


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      .     +.+.++++++ +++|+|++++|+||+|...+.+++.++++. ++++|+|++|.....- ...    ..+..+++
T Consensus       138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~l----~~GaDi~v  206 (394)
T PRK07050        138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KPF----EHGVDISV  206 (394)
T ss_pred             C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CHH----HcCCeEEE
Confidence            2     4578888886 689999999999999999999999999987 9999999999753321 111    22456999


Q ss_pred             cCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|++|.++ ..|.+.|++++ ++++++.++..+..  .++++.....+...|++
T Consensus       207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t  260 (394)
T PRK07050        207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPS  260 (394)
T ss_pred             EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc
Confidence            99999885 33456898876 67888877765553  45666666665554443

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.86  E-value=7.6e-21  Score=182.87  Aligned_cols=229  Identities=18%  Similarity=0.235  Sum_probs=163.4

Q ss_pred             CCCCCeeecCCC--CCCCCC-CHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++.++||+..|  .+.++. .|.+.+++.+ +..    ...|+.+...+|.+.++++.+.  +++++++|+++++..++
T Consensus        36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al  113 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI  113 (396)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence            456788999876  445666 4888888765 221    1335554456677777777654  79999999999999999


Q ss_pred             HHhcCCC-------CEEEEcCCCChhHHHHHHHCCCeEE-E---eeCCCCC----CCCHHHHHHhcccCCceEEEEeCCC
Q 019868          164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~G~~v~-~---v~~~~~~----~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      +.+...+       ++|++.++.|..+...+...+.... .   .+...++    ..|++++++++. +++++|+++.++
T Consensus       114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~  192 (396)
T PRK02627        114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ  192 (396)
T ss_pred             HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence            9665333       6799999999877655444332221 1   1111211    228999999996 689999999889


Q ss_pred             Cccc-cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       229 NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ||+| ..++.+.+++|.+.    ++++|+||+|.+|...+...  ...+...+   +.+|||.++ +|+|+||+++++++
T Consensus       193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~  268 (396)
T PRK02627        193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV  268 (396)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence            9999 67787777776654    99999999999886533211  11222222   336999999 99999999999999


Q ss_pred             HHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          302 IEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       302 i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++.+...  ...++.++++|+++.++|+
T Consensus       269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~  296 (396)
T PRK02627        269 ADVFTPGDHGSTFGGNPLACAAALAVIE  296 (396)
T ss_pred             HhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            8887653  2347889999999999986

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.85  E-value=4.7e-20  Score=175.76  Aligned_cols=198  Identities=14%  Similarity=0.089  Sum_probs=153.3

Q ss_pred             CCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868          104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (334)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~--~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~  179 (334)
                      --|.++++.+.+++...-. ++.+.  ....++|+.+++++|.++  +.|+++.|+++++..++..+..+||+|+++.++
T Consensus        11 pgP~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~   89 (368)
T PRK13479         11 PGPLTTSRTVREAMLRDWG-SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNG   89 (368)
T ss_pred             CCCCCCCHHHHHHhCCCCC-CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence            3456677889888866322 22221  246789999999999865  458889999999999999999999999998887


Q ss_pred             ChhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       180 y~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      |...  ...++..|++++.++.+.++.+|++++++++++ .++++|++++|+||||...+.+++.++++. ++++|+|+ 
T Consensus        90 ~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa-  168 (368)
T PRK13479         90 AYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDA-  168 (368)
T ss_pred             chHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEc-
Confidence            7554  467788999999999766678999999998863 356789999999999999999999999987 99999995 


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHh
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      |+.+...+  .. +...+..+++.|++|.+ |.+|  +||+++++++++.+...
T Consensus       169 ~~~~g~~~--~~-~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~  217 (368)
T PRK13479        169 MSSFGAIP--ID-IAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGN  217 (368)
T ss_pred             ccccCCcc--cc-ccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcC
Confidence            44443221  11 22223457788999964 6677  69999999988877653

>PRK07179 hypothetical protein; Provisional

Probab=99.85  E-value=1.2e-19  Score=175.48  Aligned_cols=209  Identities=17%  Similarity=0.160  Sum_probs=160.3

Q ss_pred             CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-C------CCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-F------PYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~------~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++..+++++.++ -++...|++++++.+ +. .      ...|.  .....+|++.+|+++|.+  .+++++|+++++..
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~sG~~An~~  129 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFE--SCLLCQSGWAANVG  129 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHH
Confidence            456789997764 477778888887765 21 1      12232  224678999999999964  57889999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++++.+||.|++..+.|......++..|++++.++.     .|++++++.+++.++++|++++++||||.+.+.+++.
T Consensus       130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~  204 (407)
T PRK07179        130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV  204 (407)
T ss_pred             HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence            99999999999999999998887777788988877642     4899999998643578899999999999999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCCCC---chhhhcCCC-cEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          242 KILEM-PILVVLDEAYTEFSGLES---RMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~~~---~~~~~~~~~-~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      ++++. ++++|+||+|.....+..   .....+..+ .++++.|+||.+|   .|+||+++++++++.+.....+
T Consensus       205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~  276 (407)
T PRK07179        205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYP  276 (407)
T ss_pred             HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcC
Confidence            99987 999999999975433221   121222112 2588999999886   3799999999998888765543

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.85  E-value=5.1e-20  Score=177.14  Aligned_cols=203  Identities=16%  Similarity=0.238  Sum_probs=153.2

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-C-----CcChHHHHHHHH----HhcCCCCCCEEEeCC-HHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPESRRLRAALA----KDSGLESDHILVGCG-ADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p-----~~g~~~lr~~lA----~~~~~~~~~I~~t~G-~~~~i~~~~~  164 (334)
                      .+++|+++++++++|+.+.++..+......| +     ..|..+++++++    +++|++.++++++++ ++++...+..
T Consensus        21 ~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~  100 (398)
T cd00613          21 SMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLA  100 (398)
T ss_pred             CcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHH
Confidence            4599999999999988887766554111234 2     346555555555    556877767877774 4445555555


Q ss_pred             HhcCC--CCEEEEcCCCChhHHHHHHHCC----CeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH-
Q 019868          165 CVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND-  237 (334)
Q Consensus       165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~G----~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~-  237 (334)
                      +++.+  ||+|++++|.|+.+...+...|    ++++.++.++++.+|++++++++. +++++|++++|+ |||.+.+. 
T Consensus       101 ~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~l  178 (398)
T cd00613         101 AIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDLI  178 (398)
T ss_pred             HHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecchH
Confidence            55666  9999999999999988887777    999999876667899999999997 689999999985 89999886 


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHHHH
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~~l  305 (334)
                      +++.++++. ++++|+|+++........    ....+.++++.|++|.+ ++    |+|+||+++++++++.+
T Consensus       179 ~~i~~la~~~g~~livD~~~~~~~~~~~----~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~  246 (398)
T cd00613         179 KEIADIAHSAGALVYVDGDNLNLTGLKP----PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFL  246 (398)
T ss_pred             HHHHHHHHhcCCEEEEEeccccccCCCC----hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhC
Confidence            999999987 999999998754321111    11234679999999987 55    79999999998888764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.85  E-value=4.8e-20  Score=176.93  Aligned_cols=192  Identities=18%  Similarity=0.126  Sum_probs=146.6

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH-HHHHH---HCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAA---VNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~---~~G~~v~~v~~  199 (334)
                      .+|+++...+|++++|++++.+. .+++ +++++++..++.+++++||+|+++.|+|+.. .....   ..|+++..++.
T Consensus        56 ~r~~~p~~~~Le~~lA~~~g~~~-~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~  133 (388)
T PRK07811         56 ARTGNPTRTALEEQLAALEGGAY-GRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL  133 (388)
T ss_pred             cCCCCccHHHHHHHHHHHhCCCc-eEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence            34577889999999999999754 3444 5557999999999999999999999999853 33222   25887777653


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|....... +..    .+..+++
T Consensus       134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~~----~gaDivv  202 (388)
T PRK07811        134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PLA----LGADVVV  202 (388)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-chh----hCCcEEE
Confidence                 48999999997 589999999999999999999999999987 99999999998654321 111    2345999


Q ss_pred             cCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|++|.++.+| .+.||++++ +++.+.+...+..  ...++..++.+...|+.
T Consensus       203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t  256 (388)
T PRK07811        203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT  256 (388)
T ss_pred             ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence            99999987654 567999874 6776766655443  34556666666666654

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.85  E-value=3.2e-20  Score=176.88  Aligned_cols=188  Identities=22%  Similarity=0.187  Sum_probs=144.5

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~  199 (334)
                      .+||++...+|++++|++.  ..+ .++++++++++..++.+++++||+|++++|.|..+...+    ...|++++.++.
T Consensus        46 ~ry~~p~~~~Le~~lA~l~--~~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  122 (366)
T PRK07582         46 GRASNPTWRALEAALGELE--GAE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT  122 (366)
T ss_pred             ECCCCccHHHHHHHHHHHc--CCC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence            5679999999999999999  344 455555567999999989999999999999998876644    347999999985


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      ++++    +    .+. +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+..    ....+++
T Consensus       123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~-~p~~----~g~Divv  188 (366)
T PRK07582        123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQ-RPLE----LGADLVV  188 (366)
T ss_pred             CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcccc-Cchh----cCCcEEE
Confidence            4321    1    222 478999999999999999999999999987 9999999999642211 1211    2334899


Q ss_pred             cCCchhh-cccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRA-GLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~-gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|++|.+ |.+|+|+||+++ ++++++.+...+..  ..++++.++.+...|+.
T Consensus       189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t  242 (366)
T PRK07582        189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT  242 (366)
T ss_pred             ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc
Confidence            9999987 456799999998 57888877765544  34677887777777764

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.85  E-value=2.6e-20  Score=177.73  Aligned_cols=196  Identities=20%  Similarity=0.164  Sum_probs=153.5

Q ss_pred             ecCCCCCCCCCCHHHHHHHhc-CcC---C---CCCCC-----cChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHH
Q 019868           99 KIDANENPYGPPPEVREALGQ-LKF---P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC  165 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~-~~~---~---~~Yp~-----~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~  165 (334)
                      .|+.+.+++++|+.+.+++.+ +..   .   ..|+.     .+..++|+.++++++++. ++|++|+|+++++.+++.+
T Consensus         2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~   81 (376)
T TIGR01977         2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG   81 (376)
T ss_pred             CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence            577778888888888888764 211   1   12432     346789999999999864 4899999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++||+|+++.+.|+.+.    ..++..|.+++.++.+.++.+|+++++++++ +++++|++++|+||||.+++.+++.
T Consensus        82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i~  160 (376)
T TIGR01977        82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEIG  160 (376)
T ss_pred             ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHHH
Confidence            8999999999999997654    3455579999999876677899999999996 6899999999999999999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ++++. ++++|+|++++.....-    .+...+-.+++.|++|.++.| -.+|.+++.++
T Consensus       161 ~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p-~g~g~l~~~~~  215 (376)
T TIGR01977       161 ELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGP-QGTGGLYIREG  215 (376)
T ss_pred             HHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCC-CCceEEEEcCC
Confidence            99987 99999999997543211    112234568999999976533 23677766443

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.85  E-value=1.2e-19  Score=175.10  Aligned_cols=199  Identities=14%  Similarity=0.069  Sum_probs=154.1

Q ss_pred             CCCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (334)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y  180 (334)
                      ..|...++.+++++......++.+..  -..++++.++++++.+. +.+++++|+++++..++..++++||+|+++++.|
T Consensus        15 pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~   94 (401)
T PLN02409         15 PGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQ   94 (401)
T ss_pred             CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence            44556778999998763222222221  24577778888889875 4678899999999999998999999999999988


Q ss_pred             hhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHH--HhC-CCeEEE
Q 019868          181 TMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVVL  252 (334)
Q Consensus       181 ~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l--~~~-~~~lIv  252 (334)
                      ..+  ...++..|++++.++.+.+..+|++++++++++   +++++|++++++||||.+++.+++.++  ++. ++++|+
T Consensus        95 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vv  174 (401)
T PLN02409         95 FSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLV  174 (401)
T ss_pred             hhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEE
Confidence            654  466777899999999765567899999999974   378999999999999999999999999  876 999999


Q ss_pred             ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      |++++...    ..-.+.+.+.++++.|.+|.++.| .++||++++++.++.+.+
T Consensus       175 D~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~  224 (401)
T PLN02409        175 DGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKT  224 (401)
T ss_pred             EcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhc
Confidence            99987321    111122334558888889988643 479999999999888764

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.85  E-value=6.4e-20  Score=175.11  Aligned_cols=190  Identities=18%  Similarity=0.171  Sum_probs=154.3

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKS  201 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~  201 (334)
                      |+++...+|++++|+++|.  ++.++++++++++..++.+++++||+|+++.+.|.....    .+...|+++..++.+ 
T Consensus        37 ~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-  113 (369)
T cd00614          37 IGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-  113 (369)
T ss_pred             CCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-
Confidence            4667789999999999985  467777888899999999999999999999999976543    344679998888743 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                          |+++++++++ +++++|++.+|+||+|.+.+.+++.++++. ++++|+|++|...... ...    ..+.++++.|
T Consensus       114 ----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~S  183 (369)
T cd00614         114 ----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVHS  183 (369)
T ss_pred             ----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEec
Confidence                5899999997 589999999999999999999999999987 9999999999754431 111    2345699999


Q ss_pred             Cchhhcccc-cchheeEcCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          281 FSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       281 ~SK~~gl~G-~R~G~l~~~~-~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ++|.++.+| .+.||+++++ ++++.+......  .+++++.++++...|+.
T Consensus       184 ~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t  235 (369)
T cd00614         184 ATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT  235 (369)
T ss_pred             cceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC
Confidence            999997665 7899999977 888888766543  56788888877777764

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PLN02483 serine palmitoyltransferase

Probab=99.85  E-value=8.9e-20  Score=179.83  Aligned_cols=223  Identities=20%  Similarity=0.230  Sum_probs=159.0

Q ss_pred             CCCeeecCCCCC-CCC-----CCHHHHHHHhcCcC---C--CCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYG-----PPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~-----~~~~v~~al~~~~~---~--~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+.++|+.++. .+.     +++.+.+++.+...   .  ..|+ .....+|++++|+++| .++.|++++|....+ .
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an~-~  176 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATNS-T  176 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHH-H
Confidence            456788877532 343     23567777766321   1  2363 4568899999999999 466788888765544 6


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CC-----ceEEEEe-CCCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EK-----PKCIFLT-SPNN  229 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~-----~~~i~l~-~p~N  229 (334)
                      ++.+++++||.|++++|+|..+...++..|++++.++..     |++++++.+++      ++     .++++++ ...|
T Consensus       177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s  251 (489)
T PLN02483        177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS  251 (489)
T ss_pred             HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence            677789999999999999999999999999999999853     44555554421      22     2556665 5579


Q ss_pred             ccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC---Cchhhh--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      ++|.+.+.+++.++++. ++++|+||+|.....+.   ......  ...+.+++++||||.||++|   ||+++++++++
T Consensus       252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~  328 (489)
T PLN02483        252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ  328 (489)
T ss_pred             CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence            99999999999999987 99999999997433221   111111  22467899999999999887   99999999999


Q ss_pred             HHHHhcCC--C--CCcHHHHHHHHHHh
Q 019868          304 YLWRAKQP--Y--NVSVAAEVAACAAL  326 (334)
Q Consensus       304 ~l~~~~~~--~--~~~~~~q~aa~~~L  326 (334)
                      .+......  +  ..++....++.++|
T Consensus       329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL  355 (489)
T PLN02483        329 YLKRTCPAHLYATSMSPPAVQQVISAI  355 (489)
T ss_pred             HHHHhCccccccCCcCHHHHHHHHHHH
Confidence            99876432  2  23433333445555

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.84  E-value=8.7e-20  Score=178.48  Aligned_cols=201  Identities=17%  Similarity=0.196  Sum_probs=156.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-C-----CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p-----~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      ..+.++.|.+++..|..+.+++........| |     ..|    ..++++.+++++|++.+++++++|+++++..++.+
T Consensus        69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a  148 (447)
T PRK00451         69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA  148 (447)
T ss_pred             CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence            5678899999888887777666442221224 3     223    23455677888999988999999999999999888


Q ss_pred             hc-CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                      +. .+||+|+++++.|+.+...++.    .|++++.++.+++ .+|+++++++++ +++++|++++| ||||.+.+.+++
T Consensus       149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I  225 (447)
T PRK00451        149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI  225 (447)
T ss_pred             HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence            74 7999999999999988876554    6999999997666 899999999997 68999999999 899999999999


Q ss_pred             HHHHhC-CCeEEE--ccCCcCccCCCCchhhhcCCCcEEEEc---CCchhhcccccchheeEcCHHHHHHH
Q 019868          241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       241 ~~l~~~-~~~lIv--Deay~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      .++++. ++++++  |.+...+..      ...+.+.++++.   +|||.|.+.|+|+||+++++++++.+
T Consensus       226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~  290 (447)
T PRK00451        226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQM  290 (447)
T ss_pred             HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhC
Confidence            999988 888887  543221111      112334456655   78888888999999999999888873

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.84  E-value=1.2e-19  Score=171.40  Aligned_cols=194  Identities=11%  Similarity=0.088  Sum_probs=150.7

Q ss_pred             CCCCCHHHHHHHhcC-cCC-CCCCCcChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CC
Q 019868          106 PYGPPPEVREALGQL-KFP-YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TF  180 (334)
Q Consensus       106 ~~~~~~~v~~al~~~-~~~-~~Yp~~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y  180 (334)
                      |..+++.+++++... ... ..|+ ....++|+.++++++++++  .|+++.|+++++..++..++.+||+|++..+ .|
T Consensus         7 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~   85 (355)
T TIGR03301         7 PLSTSATVRDAMLVDWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAY   85 (355)
T ss_pred             CCCCCHHHHHHhhhhccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCch
Confidence            566778899998762 111 1233 3367899999999999765  5778999999999999999888888665554 55


Q ss_pred             hh-HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868          181 TM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (334)
Q Consensus       181 ~~-~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~  257 (334)
                      +. +...++..|.+++.++.++++.+|++++++.+++ .+.+++++++++||||...+.+++.++++. ++++|+|++++
T Consensus        86 ~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s  165 (355)
T TIGR03301        86 GERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSS  165 (355)
T ss_pred             hhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccc
Confidence            54 5667788999999999766788999999999863 356788888999999999999999999987 99999998765


Q ss_pred             CccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHH
Q 019868          258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      .... +  . .+...+..+++.|++|.+ |++|  +||+++++++++.+.
T Consensus       166 ~g~~-~--~-~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~  209 (355)
T TIGR03301       166 FGAI-P--I-DIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASA  209 (355)
T ss_pred             cCCc-c--c-chhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhh
Confidence            3321 1  1 122345668999999976 5555  699999999988765

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.84  E-value=1.5e-19  Score=172.20  Aligned_cols=185  Identities=18%  Similarity=0.144  Sum_probs=147.0

Q ss_pred             CCHHHHHHHhcCcCCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---------------E
Q 019868          109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K  172 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd---------------~  172 (334)
                      +|+++++++.+... ..+... -..++++.+++++|.+  ++++++|+++++..++.+++++||               +
T Consensus        25 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e  101 (363)
T TIGR01437        25 VSDEVADAQKRGAQ-NYFEIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE  101 (363)
T ss_pred             CCHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence            67899999887422 112322 3567888888888864  799999999999999999999998               9


Q ss_pred             EEEcCCCChhH----HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE-EeCCCCccccCCcHHHHHHHHhC-
Q 019868          173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM-  246 (334)
Q Consensus       173 Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~-l~~p~NPtG~~~~~~~l~~l~~~-  246 (334)
                      |+++.|.|..|    ...+...|++++.++.  ++.+|+++++++++ +++++++ +++|+||+|.+.+.+++.++++. 
T Consensus       102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~  178 (363)
T TIGR01437       102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH  178 (363)
T ss_pred             EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence            99999877765    4666778999999975  35799999999997 6788766 57899999999999999999997 


Q ss_pred             CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      |+++|+|++|..-     . ......+..+++.|++|.+  +|+|.|+++.+++.++.+..
T Consensus       179 gi~vivD~a~~~~-----~-~~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~  231 (363)
T TIGR01437       179 NLPLIVDAAAEED-----L-QKYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKL  231 (363)
T ss_pred             CCeEEEECCCCCc-----h-HHHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHh
Confidence            9999999999721     1 1111123458889999965  68899999999888887654

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.84  E-value=5e-20  Score=178.00  Aligned_cols=234  Identities=19%  Similarity=0.182  Sum_probs=163.0

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCCCCc-----ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Yp~~-----g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .++.++||+..|  ...++ .+|++.+++.+ +.....|+..     ...++.+.++++++.+.++|++++|+++++..+
T Consensus        33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a  112 (413)
T cd00610          33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA  112 (413)
T ss_pred             CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence            356789999876  55676 78889888765 4333445432     356899999999987788999999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCCC------CCCCCHHHHHHhccc--CCc
Q 019868          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS------DFSLNVELIADAVER--EKP  219 (334)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~~------~~~~d~~~l~~~l~~--~~~  219 (334)
                      ++.+.  .++++|++.+++|..+....... +            .+++.+|.+.      ++..|++.+++.+++  .++
T Consensus       113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~  192 (413)
T cd00610         113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV  192 (413)
T ss_pred             HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence            99764  67899999999998755443322 1            2345565431      244589999998874  245


Q ss_pred             eEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      ++++++..+|++|..++    .+++.++++. ++++|+||+|.+|...+.... ....+...-+.||||.++. |+|+||
T Consensus       193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~~-g~~~g~  270 (413)
T cd00610         193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLGG-GLPLGA  270 (413)
T ss_pred             EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEcccccC-ccccEE
Confidence            66666555777899875    4555555555 999999999998743222111 1111111124489999985 899999


Q ss_pred             eEcCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHhc
Q 019868          295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       295 l~~~~~~i~~l--~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++++.+  ....  ..++.+++++.++.++|+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~  307 (413)
T cd00610         271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLE  307 (413)
T ss_pred             EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999886  2222  236778888888877764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.84  E-value=1.7e-19  Score=166.93  Aligned_cols=169  Identities=18%  Similarity=0.135  Sum_probs=136.4

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--C
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S  201 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~  201 (334)
                      ..+|..-..++++.+|+++|.+ +-+++++|+++++..++.+++++||+|+++.++|..+...+...|++++.++.+  .
T Consensus        54 l~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~  132 (294)
T cd00615          54 LLDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP  132 (294)
T ss_pred             CCCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence            3346666889999999999964 345559999999999999999999999999999998888888899999988743  2


Q ss_pred             C----CCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCchhhhcCCCc
Q 019868          202 D----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDN  274 (334)
Q Consensus       202 ~----~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~~~~~~~~~~  274 (334)
                      +    ..+|++++++++++ .+++++++++| |++|.+++.+++.++++. ++++|+||+|..+ .+.+.........+.
T Consensus       133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~  211 (294)
T cd00615         133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA  211 (294)
T ss_pred             ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence            2    37899999999863 46899999999 789999999999999988 9999999999753 232222222234577


Q ss_pred             EEEEcCCchhhcccccchheeE
Q 019868          275 LIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      ++++.|++|.  ++|+|.|+++
T Consensus       212 div~~S~hK~--l~g~~~~~~l  231 (294)
T cd00615         212 DIVVQSTHKT--LPALTQGSMI  231 (294)
T ss_pred             cEEEEchhcc--cchHhHHHHH
Confidence            8999999996  4788876554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.84  E-value=1.7e-19  Score=172.90  Aligned_cols=191  Identities=19%  Similarity=0.193  Sum_probs=148.0

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKS  201 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~  201 (334)
                      +|+++...+|++++|+++|.  +++++++|+++++..++.+++++||+|+++.|.|..+...+   ...|+++..+.   
T Consensus        49 r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~---  123 (385)
T PRK08574         49 REENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY---  123 (385)
T ss_pred             CCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence            44677789999999999995  47788899999999999999999999999999999876655   34687777653   


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                         +|++++++++++.++++|++++|+||||.+++.+++.++++. ++++|+|++|...... ...    ..+..+++.|
T Consensus       124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~S  195 (385)
T PRK08574        124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVHS  195 (385)
T ss_pred             ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEee
Confidence               368999999973389999999999999999999999999987 9999999999643211 111    2345699999


Q ss_pred             Cchhhcccccch-heeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          281 FSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       281 ~SK~~gl~G~R~-G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ++|.++.+|-++ |++++ ++++++.++..+..  ..++++..+.+...|+.
T Consensus       196 ~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t  247 (385)
T PRK08574        196 LTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT  247 (385)
T ss_pred             CceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence            999987666654 65555 67888877655543  34666666666555553

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.84  E-value=4.7e-19  Score=171.00  Aligned_cols=224  Identities=21%  Similarity=0.210  Sum_probs=160.6

Q ss_pred             CCeeecCCC-CCCCCCCHHHHHHHhc-Cc-CCC-------CC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++|+.| ...+..+|++++++.+ +. ++.       .| ..+...+|++++|+++|. ++.+++++| ++++..++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~~l~~~sG-~~an~~ai  122 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ESALVFTSG-YVANDATL  122 (402)
T ss_pred             eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-CeEEEECch-HHHHHHHH
Confidence            457888776 4578899999988765 22 211       12 223467899999999995 344555554 67777777


Q ss_pred             HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ..+..  +|+.|+.....|......+...|+++..++.     .|++++++.++.   .++++|++++|+||||.+.+.+
T Consensus       123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~  197 (402)
T TIGR01821       123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE  197 (402)
T ss_pred             HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            76654  6777777666777666667778888766653     266677666642   3578999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCC--Cc-hhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLE--SR-MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~--~~-~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~-  312 (334)
                      ++.++++. ++++|+||+|....+.+  .. ....+ ..+.+++++||||.||++|   ||+++++++++.+.+....+ 
T Consensus       198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~  274 (402)
T TIGR01821       198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI  274 (402)
T ss_pred             HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence            99999987 99999999998332211  11 11111 1234688999999999888   99999999999887665442 


Q ss_pred             ---CCcHHHHHHHHHHhcC
Q 019868          313 ---NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ---~~~~~~q~aa~~~L~~  328 (334)
                         +.++.++.++.++|+.
T Consensus       275 ~t~~~~~~~~aaa~aaL~~  293 (402)
T TIGR01821       275 FTTSLPPAIAAGATASIRH  293 (402)
T ss_pred             ecCcCCHHHHHHHHHHHHH
Confidence               4677788888888764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.83  E-value=2.5e-19  Score=172.66  Aligned_cols=207  Identities=19%  Similarity=0.167  Sum_probs=151.3

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-C--cC------CCCC-CCcChHHHHH----HHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-L--KF------PYIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~------~~~Y-p~~g~~~lr~----~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.++|..+++..  ++.+++++.. +  .+      ...| +..+...+++    .+++++|++..+|++++| ++++..
T Consensus        20 ~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~   96 (402)
T cd00378          20 ETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLA   96 (402)
T ss_pred             hCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHH
Confidence            458887777765  6889999875 2  11      1223 2334445555    466788987766766655 689999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHH-----HHHCCCeEEEeeC--C-CCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPR--K-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~G~~v~~v~~--~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++.+++++||+|++++|+|+.+...     ++..|.++..++.  + +++.+|++++++.+.+.++++|++++|+||  .
T Consensus        97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~  174 (402)
T cd00378          97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--R  174 (402)
T ss_pred             HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--C
Confidence            9999999999999999999866433     5557877766653  2 268999999999986568999999998876  5


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCC-cCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcC
Q 019868          234 IINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ  310 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~  310 (334)
                      ..+.+++.++++. ++++|+|++| .++.+.+.....+.  ...++++|+||.+  +|+|+||+++++ ++++.+.+...
T Consensus       175 ~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~  250 (402)
T cd00378         175 PIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVF  250 (402)
T ss_pred             CcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhC
Confidence            6689999999987 9999999996 44433221111112  2237899999975  799999999976 89998877665


Q ss_pred             C
Q 019868          311 P  311 (334)
Q Consensus       311 ~  311 (334)
                      +
T Consensus       251 ~  251 (402)
T cd00378         251 P  251 (402)
T ss_pred             c
Confidence            4

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.83  E-value=1.4e-19  Score=160.71  Aligned_cols=231  Identities=19%  Similarity=0.232  Sum_probs=163.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc----C-------cCCCCCC-CcChHHHHHHHHHhc------CCCCCCEEEeCCHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ----L-------KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGAD  156 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~  156 (334)
                      ...|.|+.|.+.. . |++.+.+++    +       .....|. ..|...|.+++++.+      ++++.||.+|+|++
T Consensus        30 ~g~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQ  107 (417)
T COG3977          30 PGAIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQ  107 (417)
T ss_pred             CCceeeCCCCccc-C-hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCcc
Confidence            3478888766533 2 444444332    1       1225674 457888888888765      57889999999999


Q ss_pred             HHHHHHHHHhcC---CC--CEEEEc-CCCChhHHHHHHHCCCeEEEeeC-----CC---CCCCCHHHHHHhcccCCceEE
Q 019868          157 ELIDLIMRCVLD---PG--DKIVDC-PPTFTMYEFDAAVNGAAVVKVPR-----KS---DFSLNVELIADAVEREKPKCI  222 (334)
Q Consensus       157 ~~i~~~~~~l~~---~g--d~Vl~~-~p~y~~~~~~~~~~G~~v~~v~~-----~~---~~~~d~~~l~~~l~~~~~~~i  222 (334)
                      .+...++..|..   .|  .+|+.| .|.|..|..+.-.-. -.+.+..     +.   .+.+|.+++.-   .+.+.+|
T Consensus       108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i---~e~~g~i  183 (417)
T COG3977         108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI---GESTGAI  183 (417)
T ss_pred             chHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc---ccccceE
Confidence            999999987753   24  356555 688887765422111 1222221     11   24567777653   2678999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhcccccchheeE
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      +++.|.||||.+++.+|+.+|...    ++.+|+|.+|..-... -....  .--.+|++.|.|+|| .|+||.|+|.++
T Consensus       184 c~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~-iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiI  261 (417)
T COG3977         184 CVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPG-IIFSDATPLWNENIILCMSLSK-LGLPGSRCGIII  261 (417)
T ss_pred             EecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCc-eecccccccCCCCEEEEeehhh-cCCCCcceeEEE
Confidence            999999999999999999998765    9999999999742211 00000  112589999999999 799999999999


Q ss_pred             cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868          297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +++++++.+......  ..++.++++++..+++..+.++
T Consensus       262 ane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~r  300 (417)
T COG3977         262 ANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLR  300 (417)
T ss_pred             ccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHH
Confidence            999999999888776  4577889999999998876643

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.83  E-value=3.6e-20  Score=169.39  Aligned_cols=200  Identities=19%  Similarity=0.313  Sum_probs=158.0

Q ss_pred             CCCC-CcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEE
Q 019868          124 YIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (334)
Q Consensus       124 ~~Yp-~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~  195 (334)
                      -.|. +.|.+-+|+.+|++.    |  .+|++|++|.|++.++..++..++ .+.+.|++|-|.|+.|...+..+|+..+
T Consensus       107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v  186 (475)
T KOG0258|consen  107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV  186 (475)
T ss_pred             cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence            4474 568999999999997    3  578899999999999999999876 5779999999999999999988888877


Q ss_pred             Eee--CCCCCCCCHHHHHHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-C
Q 019868          196 KVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S  264 (334)
Q Consensus       196 ~v~--~~~~~~~d~~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~  264 (334)
                      .+-  .+.+|.+|.+++++.+++    -+++++++.||.||||++++++-+++|++.    +++++.||+|++-.+.. +
T Consensus       187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~s  266 (475)
T KOG0258|consen  187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGS  266 (475)
T ss_pred             ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCc
Confidence            654  457899999999987643    468999999999999999999999999875    89999999999877643 2


Q ss_pred             chhh-------hc----CCCcEEEEcCCchhh-cccccchheeEc---CHHHHHHHHHhcCC-CCCcHHHHHHHH
Q 019868          265 RMEW-------VK----KHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAAC  323 (334)
Q Consensus       265 ~~~~-------~~----~~~~~i~i~S~SK~~-gl~G~R~G~l~~---~~~~i~~l~~~~~~-~~~~~~~q~aa~  323 (334)
                      ....       +.    +.-.++.++|.||.+ |=.|.|-||+-+   ++++.+.+.+.... .+.++.+|...-
T Consensus       267 kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vd  341 (475)
T KOG0258|consen  267 KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVD  341 (475)
T ss_pred             chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhc
Confidence            2211       11    122467789999986 678999999965   67777766665443 455555555443

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.83  E-value=1e-18  Score=168.84  Aligned_cols=223  Identities=18%  Similarity=0.181  Sum_probs=159.8

Q ss_pred             CCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CC-------CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FP-------YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~-------~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++|+.++ ..++++|++++++.+ +. .+       ..| +.+...+|++++|++++. ++.+++++|. ++...++
T Consensus        46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG~-~an~~ai  123 (407)
T PRK09064         46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSGY-VSNDATL  123 (407)
T ss_pred             ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHHHH
Confidence            5689997764 578889999988865 21 11       123 344578899999999994 5566667765 4555555


Q ss_pred             HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ..+..  +++.|+.....|......+...|+++..++.     .|++++++.++.   +++++|++++++||+|.+.+.+
T Consensus       124 ~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~  198 (407)
T PRK09064        124 STLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIA  198 (407)
T ss_pred             HHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHH
Confidence            65543  7777766666676666666777887766653     267777776642   4678999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcC--ccCCCCch-hhhcC-CCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868          239 DLLKILEM-PILVVLDEAYTE--FSGLESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~--~~~~~~~~-~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~-  312 (334)
                      ++.++++. ++++|+||+|..  +...+... ...+. .+.+++++||||.||++|   ||+++++++++.+.+...++ 
T Consensus       199 ~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~~  275 (407)
T PRK09064        199 EICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGFI  275 (407)
T ss_pred             HHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCcccc
Confidence            99999987 999999999973  22222111 11111 234789999999999888   99999999999887665442 


Q ss_pred             ---CCcHHHHHHHHHHhc
Q 019868          313 ---NVSVAAEVAACAALQ  327 (334)
Q Consensus       313 ---~~~~~~q~aa~~~L~  327 (334)
                         +.++.++.++.++|+
T Consensus       276 ~t~~~~~~~~~aa~~al~  293 (407)
T PRK09064        276 FTTSLPPAIAAAALASIR  293 (407)
T ss_pred             ccCcCCHHHHHHHHHHHH
Confidence               456677777777664

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.82  E-value=6.9e-19  Score=168.48  Aligned_cols=211  Identities=16%  Similarity=0.111  Sum_probs=157.9

Q ss_pred             CCCCCCHHHHHHHhc-CcCCCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868          105 NPYGPPPEVREALGQ-LKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (334)
Q Consensus       105 ~~~~~~~~v~~al~~-~~~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y  180 (334)
                      ..++.++++.++... ....+.|.   .++...|++++|++.+.  +++++++|+++++..++.+++++||+|++++|.|
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y  110 (394)
T PRK09028         33 VVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCY  110 (394)
T ss_pred             cccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence            345555666665543 22224453   44567999999999864  4799999999999999999999999999999999


Q ss_pred             hhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          181 TMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       181 ~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      ..+...+    ...|+++..++..     |.+.++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++
T Consensus       111 ~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t  184 (394)
T PRK09028        111 EPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT  184 (394)
T ss_pred             HHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence            7766433    4478888877532     4578888886 689999999999999999999999999987 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      |.....- .+    .+.+-+++++|.+|.+ |..+...|+++.+++.++.+......  .++++...+.+...|+.
T Consensus       185 ~a~p~~~-~P----l~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T  255 (394)
T PRK09028        185 WASPINS-RP----FEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT  255 (394)
T ss_pred             ccccccC-Cc----cccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence            9743211 11    1345679999999987 54567789888788877766644332  35677766666655553

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=7.8e-19  Score=168.57  Aligned_cols=204  Identities=22%  Similarity=0.231  Sum_probs=166.5

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC-----cCCC--CCCCc-----ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL-----KFPY--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID  160 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-----~~~~--~Yp~~-----g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~  160 (334)
                      +.+++.|+...... .|..+.+++.+.     ...+  .|+..     ..++.|+.+|++++.++ ++|++|.|+|++|+
T Consensus        20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln   98 (405)
T COG0520          20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN   98 (405)
T ss_pred             CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence            45678888877665 567788777642     1111  12211     25689999999999985 89999999999999


Q ss_pred             HHHHHh---cCCCCEEEEcCCCCh----hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++..++   ..+||+|++.+-.|+    ++...++..|++++.+|.++++.+|++.++..++ +++|+|.+++.+|.||.
T Consensus        99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~  177 (405)
T COG0520          99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT  177 (405)
T ss_pred             HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence            999998   689999999999886    5566777789999999977888999999999887 78999999999999999


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch-hhcccccchheeEcCHHHHHHH
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      +.|.+++.++++. ++++++|.+++-    +...-.+...+.++++.|..| .+|..|  +|.+++.+++.+.+
T Consensus       178 ~~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l  245 (405)
T COG0520         178 VNPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEEL  245 (405)
T ss_pred             cchHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhc
Confidence            9999999999998 999999999863    222223345567799999999 566445  89999999999877

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.82  E-value=4.9e-19  Score=170.87  Aligned_cols=197  Identities=19%  Similarity=0.172  Sum_probs=150.2

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-Cc--C--CCCC-C------CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LK--F--PYIY-P------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~--~--~~~Y-p------~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      +.|+.+... +.++.+.+++.. +.  .  .... .      ....+++|+.+++++|+++++|++++|+++++..++..
T Consensus         5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~   83 (402)
T TIGR02006         5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG   83 (402)
T ss_pred             EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence            667665543 556788888754 21  1  1110 0      11255789999999999999999999999999998876


Q ss_pred             hc----CCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      +.    ++||+|+++.+.|+.+...+   +..|++++.++.++++.+|++.+++.++ +++++|++++++||||.+.+.+
T Consensus        84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~  162 (402)
T TIGR02006        84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA  162 (402)
T ss_pred             HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence            53    68999999999998755443   4469999999977778899999999997 5789999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      ++.++++. ++++++|++++.... +   -.+....-.+++.|..|.+|.+|  +|+++++++..
T Consensus       163 ~I~~l~~~~g~~livD~a~a~g~~-~---~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~  221 (402)
T TIGR02006       163 AIGEICRERKVFFHVDAAQSVGKI-P---INVNELKVDLMSISGHKIYGPKG--IGALYVRRKPR  221 (402)
T ss_pred             HHHHHHHHcCCEEEEEcchhcCCc-c---cCccccCCCEEEEehhhhcCCCc--eEEEEEccCCC
Confidence            99999987 999999999864321 1   11123344588899999777446  89988875433

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.82  E-value=5.3e-19  Score=169.83  Aligned_cols=174  Identities=16%  Similarity=0.216  Sum_probs=137.2

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-H---HHHHHHCCCeEEEeeCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~G~~v~~v~~~~~~  203 (334)
                      ++...+|++.+|+++|.+ +.+++++| +.++..++. ++++||+|++++|.|+. |   ...++..|++++.++..   
T Consensus        53 ~p~~~~le~~lA~l~g~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---  126 (390)
T PRK08064         53 NPTREALEDIIAELEGGT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT---  126 (390)
T ss_pred             ChhHHHHHHHHHHHhCCC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC---
Confidence            455789999999999976 56777666 567887776 78999999999999973 3   24455689999998752   


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                        |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..+.... ..    ..+.+++++|++
T Consensus       127 --d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~t  198 (390)
T PRK08064        127 --NLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSAT  198 (390)
T ss_pred             --CHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeecc
Confidence              7899999997 689999999999999999999999999987 99999999998654221 11    234569999999


Q ss_pred             hhhc-ccccchheeEc-CHHHHHHHHHhcCCCCCc
Q 019868          283 KRAG-LAGLRVGYGAF-PLSIIEYLWRAKQPYNVS  315 (334)
Q Consensus       283 K~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~~~~~  315 (334)
                      |.++ ..|...|++++ ++++++.+...+..++..
T Consensus       199 K~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~  233 (390)
T PRK08064        199 KFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAV  233 (390)
T ss_pred             eeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence            9875 33455677766 568889888887766543

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.82  E-value=3.9e-19  Score=170.36  Aligned_cols=212  Identities=17%  Similarity=0.157  Sum_probs=150.9

Q ss_pred             CCHHHHHHHhc-CcC-------CCCCCCcChHHHHHHHHHhc---CC-CCCCEEEeCCHHHHHHHHHHHhc-----CC-C
Q 019868          109 PPPEVREALGQ-LKF-------PYIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCVL-----DP-G  170 (334)
Q Consensus       109 ~~~~v~~al~~-~~~-------~~~Yp~~g~~~lr~~lA~~~---~~-~~~~I~~t~G~~~~i~~~~~~l~-----~~-g  170 (334)
                      +++.+++++.+ ...       .+.|+..+...+++++++++   +. ++++|++|+|+++++..+++++.     ++ +
T Consensus        11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~   90 (382)
T TIGR03403        11 LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGK   90 (382)
T ss_pred             CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCC
Confidence            45678877754 211       12344444566777766654   54 67899999999999999998752     45 4


Q ss_pred             CEEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-
Q 019868          171 DKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-  246 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-  246 (334)
                      ++|+++...|+.+...   ++..|++++.++.++++.+|++.+++.++ ++++++++++|+||||.+++.+++.++++. 
T Consensus        91 ~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~  169 (382)
T TIGR03403        91 NHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPIKEIGEICKER  169 (382)
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCHHHHHHHHHHc
Confidence            7899998777765543   45689999999977778899999999997 678999999999999999999999999987 


Q ss_pred             CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH--HHH-----HHhcCCCCCcHHHH
Q 019868          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAKQPYNVSVAAE  319 (334)
Q Consensus       247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i--~~l-----~~~~~~~~~~~~~q  319 (334)
                      ++++++|+++.....   ... +...+-.+++.|++|.+|.+|  +|++++.++..  ..+     ......++++.+++
T Consensus       170 g~~~ivD~a~~~g~~---~~~-~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~  243 (382)
T TIGR03403       170 GVLFHTDAVQAIGKI---PVD-VQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYI  243 (382)
T ss_pred             CCEEEEechhhcCCC---ccC-ccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHH
Confidence            999999999763221   111 122334589999999877777  57777643321  001     01112356787887


Q ss_pred             HHHHHHhc
Q 019868          320 VAACAALQ  327 (334)
Q Consensus       320 ~aa~~~L~  327 (334)
                      .++..+++
T Consensus       244 ~al~~al~  251 (382)
T TIGR03403       244 VAMGEAMR  251 (382)
T ss_pred             HHHHHHHH
Confidence            66666664

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.82  E-value=4e-19  Score=170.72  Aligned_cols=229  Identities=18%  Similarity=0.277  Sum_probs=162.5

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++.++|+..|  ...++ ..|++.+++.+ +..    ...|..+...++.+.+++..+  .+++++++|+++++..++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al  105 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI  105 (389)
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence            456778998765  22333 46888887765 322    122333445678888887764  468999999999999998


Q ss_pred             HHh----cCCCC----EEEEcCCCChhHHHHHHHCCCeEEEe----eCCCCCC----CCHHHHHHhcccCCceEEEEeCC
Q 019868          164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v----~~~~~~~----~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      +..    .++||    +|++.++.|..+...+...+......    +..+++.    .|++.+++.++ +++++|+++.+
T Consensus       106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~  184 (389)
T PRK01278        106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI  184 (389)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence            865    35666    89999999998776665544432221    1112222    58999999997 58999999988


Q ss_pred             CCccc-cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       228 ~NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||+| .+++.+.+++|.+.    ++++|+||+|.+|...+....  .......   +.+|||.++ +|+|+||++++++
T Consensus       185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~  260 (389)
T PRK01278        185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE  260 (389)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence            89999 67788888887764    999999999998765332211  1111111   348999998 8999999999999


Q ss_pred             HHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          301 IIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       301 ~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +++.+......  ++.++++|+++.++|+
T Consensus       261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~  289 (389)
T PRK01278        261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLD  289 (389)
T ss_pred             HHhccCCCCCCCCCCccHHHHHHHHHHHH
Confidence            98877654433  6789999999977775

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.82  E-value=7.4e-19  Score=170.31  Aligned_cols=208  Identities=18%  Similarity=0.121  Sum_probs=150.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCC------Cc-ChHH----HHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP------DP-ESRR----LRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp------~~-g~~~----lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ++.++|..++++  +++.+++++... .  +..+++      .. ....    .|+.+++++|.+.++|++++| ++++.
T Consensus        25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~  101 (416)
T PRK00011         25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA  101 (416)
T ss_pred             hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence            567999999998  578899887652 1  111111      11 1222    355789999998777777766 56888


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHH-----HHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      .++.+++++||+|+++.|+|..+..     .....|++++.++.+ +++.+|++++++.+++.++++|++++++|  |..
T Consensus       102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~  179 (416)
T PRK00011        102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP  179 (416)
T ss_pred             HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence            9999999999999999999975432     122346788888754 45789999999999745789999876655  466


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~  311 (334)
                      .+.+++.++++. ++++|+|++|.. +...+.....+.  ...++++|+||.+  +|+|.||++++ +++++.+.+...+
T Consensus       180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~  255 (416)
T PRK00011        180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP  255 (416)
T ss_pred             cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence            789999999987 999999999753 222111111111  2358899999965  78999999995 6899988877665

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.81  E-value=1e-18  Score=165.62  Aligned_cols=165  Identities=19%  Similarity=0.173  Sum_probs=133.7

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC----CC-CEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCC
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PG-DKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~----~g-d~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~  202 (334)
                      ..++|+.+++++++++++|++++|+++++..++..+..    +| +.|++....|+.+..   .++..|++++.++.+++
T Consensus        44 ~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~  123 (353)
T TIGR03235        44 VERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES  123 (353)
T ss_pred             HHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC
Confidence            45899999999999999999999999999999887753    55 788888877775543   34457999999997777


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      +.+|++++++.++ +++++|++++++||||.+.+.+++.++++. ++++|+|+++.......    .+...+-.+++.|.
T Consensus       124 ~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~----~~~~~~~D~~~~s~  198 (353)
T TIGR03235       124 GRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITV----DLSADRIDLISCSG  198 (353)
T ss_pred             CcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccc----cccccCCCEEEeeh
Confidence            8899999999997 578999999999999999999999999987 99999999976432211    11233456888899


Q ss_pred             chhhcccccchheeEcCHHHH
Q 019868          282 SKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      +|.+|.+|  +|+++++++.+
T Consensus       199 ~K~~gp~g--~g~l~~~~~~~  217 (353)
T TIGR03235       199 HKIYGPKG--IGALVIRKRGK  217 (353)
T ss_pred             hhcCCCCc--eEEEEEccCcc
Confidence            99776555  89999887654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.81  E-value=9.2e-19  Score=156.08  Aligned_cols=247  Identities=19%  Similarity=0.223  Sum_probs=177.1

Q ss_pred             HHHHhCCCCCC-eeecCCCCC--CCCC---CHHHHHHHhcC----cCCCCC-CCcChHHHHHHHHHhc-C-----CCCCC
Q 019868           86 LSIQLGRKPED-IVKIDANEN--PYGP---PPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LESDH  148 (334)
Q Consensus        86 ~~~~~~~~~~~-~i~l~~~~~--~~~~---~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA~~~-~-----~~~~~  148 (334)
                      +.+.++.+..+ .++|++|..  +-+.   -|.|+++-..+    ...+.| |-.|.+.++.+.++.+ |     +..++
T Consensus        20 ~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~R   99 (410)
T KOG1412|consen   20 LNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDR   99 (410)
T ss_pred             hHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhcc
Confidence            55567666544 589988843  2222   25555554432    345778 8889999999998875 3     22333


Q ss_pred             -----EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCC-eEEEee--CCCCCCCCHHHHHHhcccCCce
Q 019868          149 -----ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       149 -----I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~-~v~~v~--~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                           -+-++|+...-.-++..+++ ...|.+..|+|..+...+...|. ++..++  ..++-++|++.+...++....+
T Consensus       100 v~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~  178 (410)
T KOG1412|consen  100 VFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEG  178 (410)
T ss_pred             ccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCC
Confidence                 34455555555555555565 46799999999999999999994 455555  3455689999999998755556


Q ss_pred             EEEEe-C-CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc------hhhhcCCCcEEEEcCCchhhccc
Q 019868          221 CIFLT-S-PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       221 ~i~l~-~-p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~------~~~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      .|++. . .|||||...+.|+|.+|++.    +++.+.|-+|++|+.+...      ...+.....++++.||+|+||++
T Consensus       179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlY  258 (410)
T KOG1412|consen  179 SIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLY  258 (410)
T ss_pred             cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccc
Confidence            55555 3 39999999999999999985    8999999999999864321      12344556799999999999999


Q ss_pred             ccchheeEc---CHHHHHHHH----Hhc--CCCCCcHHHHHHHHHHhcCchhhc
Q 019868          289 GLRVGYGAF---PLSIIEYLW----RAK--QPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       289 G~R~G~l~~---~~~~i~~l~----~~~--~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      |.|+|-+.+   ++..+..+.    .+.  ...+++..+..++..+|+.+++.+
T Consensus       259 neRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre  312 (410)
T KOG1412|consen  259 NERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELRE  312 (410)
T ss_pred             cccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHH
Confidence            999998854   555554332    222  236788999999999999987754

>PRK14012 cysteine desulfurase; Provisional

Probab=99.81  E-value=7.9e-19  Score=169.54  Aligned_cols=196  Identities=17%  Similarity=0.145  Sum_probs=149.3

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-CcCCCCC--C-----------CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LKFPYIY--P-----------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y--p-----------~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      |.|+.+... ++++.+.+++.+ +.....|  +           .....++|+.+|+++|+++++|++++|+++++..++
T Consensus         5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l   83 (404)
T PRK14012          5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI   83 (404)
T ss_pred             EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence            666665543 566778887754 2100011  1           012457899999999999899999999999999988


Q ss_pred             HHhc----CCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      .++.    ++||+|+++.++|+.+...+   +..|++++.++.++++.+|+++++++++ +++++|++++++||||.+.+
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~  162 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD  162 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence            7664    78999999999998765443   3469999999877778899999999997 68999999999999999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      .+++.++++. ++++|+|+++......   . .+...+-.+++.|++|.+| ++ ++|+++++++.
T Consensus       163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~  222 (404)
T PRK14012        163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKP  222 (404)
T ss_pred             HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCC
Confidence            9999999987 9999999998642211   1 1112234578889999776 43 68999887653

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.81  E-value=4.6e-19  Score=159.95  Aligned_cols=250  Identities=20%  Similarity=0.244  Sum_probs=179.7

Q ss_pred             cHHHHHHHhCCCC-CCeeecCCCCC--CCCC---CHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc-C-----CC
Q 019868           82 PFEVLSIQLGRKP-EDIVKIDANEN--PYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G-----LE  145 (334)
Q Consensus        82 ~~~~~~~~~~~~~-~~~i~l~~~~~--~~~~---~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~-~-----~~  145 (334)
                      ++....+.+..++ ...|+|++|..  +.+.   -+.|++|-+.+   .....| |..|.+++.+..+++. |     +.
T Consensus        38 pILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik  117 (427)
T KOG1411|consen   38 PILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIK  117 (427)
T ss_pred             CcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhh
Confidence            3434455555544 44699999843  2333   37777776642   233578 8889999999999985 3     22


Q ss_pred             CCCEEE-----eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhcccCC
Q 019868          146 SDHILV-----GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREK  218 (334)
Q Consensus       146 ~~~I~~-----t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~~~  218 (334)
                      .++|+.     ++|+-..-..++..+ -++..|.+|+|+|+++......+|+.+..+.  .....++|.+.+.+.+.+..
T Consensus       118 ~~Ri~tvQ~lSGTGaLriga~Fl~~f-~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p  196 (427)
T KOG1411|consen  118 EKRIVTVQTLSGTGALRVGAEFLARF-YPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP  196 (427)
T ss_pred             ccceeEEEeccCcchhhHHHHHHHhh-ccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCC
Confidence            333433     444444434444433 4689999999999999999999999988777  34567899999888886544


Q ss_pred             ceEEEEeC--CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC------CchhhhcCCCcEEEEcCCchhhc
Q 019868          219 PKCIFLTS--PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE------SRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       219 ~~~i~l~~--p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~------~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      ...++|.+  .|||||...+.++|++|.+.    +.+.+.|.+|++|..+.      .....+.+..+++++.||.|++|
T Consensus       197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG  276 (427)
T KOG1411|consen  197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG  276 (427)
T ss_pred             CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc
Confidence            45566654  49999999999999999885    89999999999998532      12334556788999999999999


Q ss_pred             ccccchheeEc---CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          287 LAGLRVGYGAF---PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       287 l~G~R~G~l~~---~~~~i~----~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +.|.|+|.+.+   +++...    .++.+..+  .+++.-+..++..+|+|++..
T Consensus       277 LYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~  331 (427)
T KOG1411|consen  277 LYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLK  331 (427)
T ss_pred             hhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHH
Confidence            99999998843   334333    34444444  467788899999999997544

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.81  E-value=1e-18  Score=146.99  Aligned_cols=165  Identities=16%  Similarity=0.148  Sum_probs=134.1

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH-HHHHHCCCeEEEeeCCCCCCCCH--
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV--  207 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~G~~v~~v~~~~~~~~d~--  207 (334)
                      ..++++.++++++.+.+++++++|+++++..++.++.+++++|+++++.|.... ..+...|++++.++.+++...+.  
T Consensus         2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~   81 (170)
T cd01494           2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV   81 (170)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence            368999999999777889999999999999999999888999999999998877 77888999999998654433333  


Q ss_pred             HHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       208 ~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      +.+++.....+++++++++++||+|...+.+++.++++. ++++|+|++|..+...... ......+.++++.|++|.|+
T Consensus        82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~  160 (170)
T cd01494          82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG  160 (170)
T ss_pred             hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence            356555544688999999999999999999999999987 9999999999987753321 11223456799999999987


Q ss_pred             ccccchheeEcC
Q 019868          287 LAGLRVGYGAFP  298 (334)
Q Consensus       287 l~G~R~G~l~~~  298 (334)
                      .  .|+|+++++
T Consensus       161 ~--~~~G~l~~~  170 (170)
T cd01494         161 G--EGGGVVIVK  170 (170)
T ss_pred             C--CceEEEEeC
Confidence            3  789998763

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.81  E-value=1.2e-18  Score=169.00  Aligned_cols=158  Identities=20%  Similarity=0.246  Sum_probs=132.5

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~  202 (334)
                      +++....|++.+|++.|.  ++.++++|+++++..++..++++||+|+++.+.|+.    +...++..|++++.++.   
T Consensus        62 ~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~---  136 (431)
T PRK08248         62 MNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP---  136 (431)
T ss_pred             CCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC---
Confidence            566678999999999984  477888888999999998899999999999998864    33455678999999974   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                        .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..... ..+   + ..+.+++++|+
T Consensus       137 --~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-~~p---l-~~gaDivv~S~  208 (431)
T PRK08248        137 --SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-LRP---I-EHGADIVVHSA  208 (431)
T ss_pred             --CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-CCh---h-HcCCCEEEEcC
Confidence              37899999997 589999999999999999999999999987 999999999862111 111   1 34667999999


Q ss_pred             chhhcccccchheeEc
Q 019868          282 SKRAGLAGLRVGYGAF  297 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~  297 (334)
                      +|.+|.+|.++|++++
T Consensus       209 tK~lgg~g~~~Gg~v~  224 (431)
T PRK08248        209 TKFIGGHGTSIGGVIV  224 (431)
T ss_pred             ccccCCCCCceEEEEE
Confidence            9999999999999877

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.81  E-value=2.3e-18  Score=164.52  Aligned_cols=188  Identities=13%  Similarity=0.074  Sum_probs=146.2

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~  202 (334)
                      .++....|++++|++.|.  +++++++|+++++..++.+++++||+|++++|.|+.....    ....|+++..++..  
T Consensus        48 gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~--  123 (377)
T TIGR01324        48 GTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL--  123 (377)
T ss_pred             CCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC--
Confidence            445568999999999984  5899999999999999999999999999999999866543    34578888877532  


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                         +.+.++++++ +++|+|++++|+||+|...+.+++.++++. ++++|+|++|....... +    .+.+..++++|+
T Consensus       124 ---~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-p----l~~gaDivv~S~  194 (377)
T TIGR01324       124 ---IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-P----LEHGVDISIQAG  194 (377)
T ss_pred             ---CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-c----cccCceEEEecC
Confidence               2278888887 689999999999999999999999999987 99999999997533211 1    134567999999


Q ss_pred             chhhcc-cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          282 SKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       282 SK~~gl-~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +|.++- ++...|+++++++.++.+......  ..+++...+.+...|+
T Consensus       195 tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~  243 (377)
T TIGR01324       195 TKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR  243 (377)
T ss_pred             ceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh
Confidence            998853 346789999998887776643322  3456665555555554

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.80  E-value=1.8e-18  Score=165.69  Aligned_cols=187  Identities=19%  Similarity=0.206  Sum_probs=145.7

Q ss_pred             HHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHH
Q 019868          112 EVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAV  189 (334)
Q Consensus       112 ~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~  189 (334)
                      +..+++.+ +..+..|+.+...+|++++|+++|.+  ++++++|+++++.+++.++ +++||+|+++.++|..+...+..
T Consensus        15 ~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~   92 (379)
T PRK11658         15 EELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVL   92 (379)
T ss_pred             HHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHH
Confidence            33444443 33334455667899999999999974  6888999999999999998 79999999999999999888889


Q ss_pred             CCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCch
Q 019868          190 NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM  266 (334)
Q Consensus       190 ~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~  266 (334)
                      .|++++.++.+ +++.+|++.++++++ +++|+|+   |+|++|...+.+++.++++. |+++|+|++|.... +.+...
T Consensus        93 ~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~  168 (379)
T PRK11658         93 LGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHI  168 (379)
T ss_pred             cCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeec
Confidence            99999999964 456799999999997 6899887   66789999999999999987 99999999998533 222111


Q ss_pred             hhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868          267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK  309 (334)
Q Consensus       267 ~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~  309 (334)
                         +...  +.+.||+|...+++.+.|+++. +++++++++..+
T Consensus       169 ---g~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~  207 (379)
T PRK11658        169 ---GARG--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLK  207 (379)
T ss_pred             ---CCCC--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHH
Confidence               2222  2456666555567788898887 478887776543

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.80  E-value=3.2e-18  Score=163.25  Aligned_cols=173  Identities=18%  Similarity=0.146  Sum_probs=136.1

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS  204 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~  204 (334)
                      ..++++.+|+++|++++++++++|+++++..++.++.      ++||+|++++++|..|...++..|++++.++.+.++.
T Consensus        61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~  140 (373)
T TIGR03812        61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT  140 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence            3689999999999988899999999999888876654      4679999999999999999999999999999777788


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-----CC--chhhhcCCCcEE
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKHDNLI  276 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-----~~--~~~~~~~~~~~i  276 (334)
                      +|++++++.++ +++..+++..|+||||.+.+.+++.++++. ++++|+|++|..+...     ..  ... +....-..
T Consensus       141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~  218 (373)
T TIGR03812       141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQS  218 (373)
T ss_pred             cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCE
Confidence            99999999986 455555555589999999999999999987 9999999999865310     00  000 00111224


Q ss_pred             EEcCCchhhcccccchheeE-cCHHHHHHHH
Q 019868          277 VLRTFSKRAGLAGLRVGYGA-FPLSIIEYLW  306 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~  306 (334)
                      +..|.+| |++++.|+|+++ .++++++.+.
T Consensus       219 ~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~  248 (373)
T TIGR03812       219 ITIDPHK-MGLSPIPAGGILFRSKSYLKYLS  248 (373)
T ss_pred             EEECccc-cCCCcCCceEEEEeCHHHHhhhc
Confidence            4567789 788888998666 5778887764

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.80  E-value=3.2e-18  Score=162.87  Aligned_cols=194  Identities=13%  Similarity=0.042  Sum_probs=146.3

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      |....+.+.+++.... .++-+..  -..++|+.++++++++++  .|++|+|+++++..++..+..+||.+++..+.+.
T Consensus        11 p~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~   89 (363)
T TIGR02326        11 PLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAY   89 (363)
T ss_pred             CCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChh
Confidence            4445677777765521 1111211  256889999999999764  6999999999999999999888888777655543


Q ss_pred             hH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868          182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (334)
Q Consensus       182 ~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~  257 (334)
                      ..  ...++..|++++.++.++++.+|++++++++++ .+++++.+++++||||..++.+++.++++. ++++|+|++++
T Consensus        90 ~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~  169 (363)
T TIGR02326        90 GARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSS  169 (363)
T ss_pred             hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccc
Confidence            33  466778999999999877788999999999864 346788889999999999999999999987 99999998765


Q ss_pred             CccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHH
Q 019868          258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      . ...+  . .+...+..+++.|++|.+ |.+|  +||++++++.++.+.
T Consensus       170 ~-g~~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~  213 (363)
T TIGR02326       170 F-GGIP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACK  213 (363)
T ss_pred             c-cCcc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhh
Confidence            3 2111  1 122334558899999976 4445  799999998887653

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.80  E-value=2.2e-18  Score=164.80  Aligned_cols=188  Identities=18%  Similarity=0.217  Sum_probs=144.0

Q ss_pred             HHHHHHHhc-CcCCCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHH
Q 019868          111 PEVREALGQ-LKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (334)
Q Consensus       111 ~~v~~al~~-~~~~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (334)
                      ++..+++.+ +..+..+. .+-..++.+.++++++.  +++++++|+++++..++.++ ++|||+|+++.++|..+...+
T Consensus        11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~   88 (376)
T TIGR02379        11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF   88 (376)
T ss_pred             HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            344555554 33323332 22357888889998875  58999999999999999887 799999999999999998888


Q ss_pred             HHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCC
Q 019868          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (334)
Q Consensus       188 ~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~  264 (334)
                      ...|++++.++.+ +++.+|+++++++++ +++|+|+   |+||+|...+.+++.++++. +++||+|++|+.+. +.+.
T Consensus        89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~  164 (376)
T TIGR02379        89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR  164 (376)
T ss_pred             HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence            8999999999965 447899999999997 6899987   77889999999999999987 99999999998765 3332


Q ss_pred             chhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      ....+.    .+.+.||  +|.+. +|.+.|+++++ ++++++++..+
T Consensus       165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~  207 (376)
T TIGR02379       165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR  207 (376)
T ss_pred             ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence            222111    1333333  38775 68789998875 78888777554

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.80  E-value=3.7e-18  Score=164.90  Aligned_cols=189  Identities=14%  Similarity=0.149  Sum_probs=146.9

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~~  203 (334)
                      .+....|++.+|++.+..  ..++++++++|+.+++.+++++||+|+++.++|......    +...|+++..++    +
T Consensus        60 nPtv~~lE~~la~leg~~--~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd----~  133 (432)
T PRK06702         60 NPTLAAFEQKLAELEGGV--GAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN----P  133 (432)
T ss_pred             CcHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC----C
Confidence            556889999999999853  578899999999999999999999999999999755444    567899999885    3


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                      .+|+++++++++ +++|+|++.+|+||+|.+.+.+++.++++. ++++|+|++|.-     +.....-..+-.|+++|+|
T Consensus       134 ~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t-----P~~~~pl~~GADIvv~S~T  207 (432)
T PRK06702        134 NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT-----PYLCQAFEHGANIIVHSTT  207 (432)
T ss_pred             CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc-----hhhCChhhcCCCEEEEccc
Confidence            578999999997 689999999999999999999999999988 999999999851     1111112344569999999


Q ss_pred             h-----hhcccccch-----heeEcC-HHHH---------------------H--HHHHhcC-CCCCcHHHHHHHHHHhc
Q 019868          283 K-----RAGLAGLRV-----GYGAFP-LSII---------------------E--YLWRAKQ-PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       283 K-----~~gl~G~R~-----G~l~~~-~~~i---------------------~--~l~~~~~-~~~~~~~~q~aa~~~L~  327 (334)
                      |     ..+++|.++     +|...+ .+++                     .  .....+. ..+++++..+.+...|+
T Consensus       208 Ky~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~  287 (432)
T PRK06702        208 KYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE  287 (432)
T ss_pred             cccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC
Confidence            9     778888887     565442 1111                     1  1111111 25788888888888887


Q ss_pred             C
Q 019868          328 N  328 (334)
Q Consensus       328 ~  328 (334)
                      .
T Consensus       288 T  288 (432)
T PRK06702        288 T  288 (432)
T ss_pred             c
Confidence            5

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.80  E-value=9e-18  Score=162.32  Aligned_cols=224  Identities=17%  Similarity=0.108  Sum_probs=159.5

Q ss_pred             CCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CCCC-------CC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~~~-------Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++|+.|+ -.+...|++++++.+ +. .+..       +. .+...+|++++|++++. ++.+++++|+ ++...++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~SG~-~An~~ai  122 (406)
T PRK13393         45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-EAALLFTSGY-VSNWAAL  122 (406)
T ss_pred             ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-CcEEEeCCcH-HHHHHHH
Confidence            4678887764 456678999988765 22 1111       11 12357899999999985 3445555554 6777788


Q ss_pred             HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHH
Q 019868          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ..+..  +||.|+.....|......+...|.+++.++.     .|++.+++.++   .+++++|++++++|++|.+.+.+
T Consensus       123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~  197 (406)
T PRK13393        123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA  197 (406)
T ss_pred             HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence            76655  7888877777888777777778888877763     25666666554   23678999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCC--CC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--  311 (334)
                      ++.++++. ++++|+||+|....++  +. .....+ ..+.+++++||||.||++|   ||+++++++++.+.+....  
T Consensus       198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~  274 (406)
T PRK13393        198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI  274 (406)
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence            99999987 9999999999733321  11 111111 1224688899999999888   9999999999988876654  


Q ss_pred             --CCCcHHHHHHHHHHhcC
Q 019868          312 --YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 --~~~~~~~q~aa~~~L~~  328 (334)
                        .+.++..+.++.++|+.
T Consensus       275 ~t~~~~p~~~aa~~aaL~~  293 (406)
T PRK13393        275 FTTSLPPAVAAGALASVRH  293 (406)
T ss_pred             ecCccCHHHHHHHHHHHHH
Confidence              23566777777777753

>PLN02651 cysteine desulfurase

Probab=99.80  E-value=3.5e-18  Score=162.78  Aligned_cols=212  Identities=19%  Similarity=0.090  Sum_probs=154.0

Q ss_pred             CCCHHHHHHHhc-CcCCCCCCC-----------cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh----cCCCC
Q 019868          108 GPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV----LDPGD  171 (334)
Q Consensus       108 ~~~~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l----~~~gd  171 (334)
                      ++|+.+.+++.+ +......|.           .-..++|+.++++++.++++|++|+|++++++.++..+    .++||
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~   89 (364)
T PLN02651         10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK   89 (364)
T ss_pred             CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence            466788888765 211111121           11457899999999999999999999999988877654    47899


Q ss_pred             EEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C
Q 019868          172 KIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~  247 (334)
                      +|+++...|+.+...   +...|++++.++.++++.+|+++++++++ ++++++++++++|+||.+.+.+++.++++. +
T Consensus        90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g  168 (364)
T PLN02651         90 HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEEIGELCREKK  168 (364)
T ss_pred             EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHHHHHHHHHcC
Confidence            999999888765433   33579999999876778899999999997 689999999999999999999999999987 9


Q ss_pred             CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh---------cCCCCCcHHH
Q 019868          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------KQPYNVSVAA  318 (334)
Q Consensus       248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~  318 (334)
                      +++++|.++......    -.+...+-++++.|..| |+ ....+|+++++++..+.+...         ....+.+..+
T Consensus       169 ~~~~vD~a~~~g~~~----~~~~~~~~D~~~~s~hK-~~-gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~  242 (364)
T PLN02651        169 VLFHTDAAQAVGKIP----VDVDDLGVDLMSISGHK-IY-GPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPL  242 (364)
T ss_pred             CEEEEEcchhhCCcc----cCcccCCCCEEEechhh-hC-CCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHH
Confidence            999999998743211    11223445799999999 43 234589999877655443211         1123455555


Q ss_pred             HHHHHHHh
Q 019868          319 EVAACAAL  326 (334)
Q Consensus       319 q~aa~~~L  326 (334)
                      ..+..++|
T Consensus       243 ~~~l~~al  250 (364)
T PLN02651        243 VVGLGAAC  250 (364)
T ss_pred             HHHHHHHH
Confidence            55555554

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=5.3e-18  Score=162.20  Aligned_cols=187  Identities=18%  Similarity=0.198  Sum_probs=140.0

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHH---HHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~G~~v~~v~~  199 (334)
                      .+|+++...+|++.+|++.|.+ +.+++++|. .++..++ .++++||+|+++.|.|+ .|..   .+...|++++.++.
T Consensus        45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG~-aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  121 (377)
T PRK07671         45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSGM-AAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT  121 (377)
T ss_pred             CCCCChHHHHHHHHHHHHhCCC-ceEEeCCHH-HHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence            3456777899999999999975 356666665 6777665 47899999999999998 4543   33447999998863


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|....... +.    .....+++
T Consensus       122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~----~~g~Divv  190 (377)
T PRK07671        122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PI----SLGADIVL  190 (377)
T ss_pred             -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hh----hhCCeEEE
Confidence                 38899999997 689999999999999999999999999987 99999999997533321 11    22446999


Q ss_pred             cCCchhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHH
Q 019868          279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACA  324 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~  324 (334)
                      +|+||.++-++ .-.|++++ ++++++.+...+..  ...++...+.+..
T Consensus       191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~  240 (377)
T PRK07671        191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLR  240 (377)
T ss_pred             ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHc
Confidence            99999987433 34566666 56788877766654  3345554444443

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.79  E-value=6.1e-18  Score=161.86  Aligned_cols=185  Identities=20%  Similarity=0.215  Sum_probs=140.8

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~  203 (334)
                      .+...+|++.++++++.  ++++++++++.++..++. ++++||+|+++++.|..+..    .+...|++++.++.    
T Consensus        46 ~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~----  118 (378)
T TIGR01329        46 NPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT----  118 (378)
T ss_pred             ChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC----
Confidence            44577999999999996  466666777789988776 78999999999999987654    34558999999875    


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                       .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|..... ..+..    .+-++++.|++
T Consensus       119 -~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l~----~g~Di~v~S~t  191 (378)
T TIGR01329       119 -TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPLE----LGADIVYHSAT  191 (378)
T ss_pred             -CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChhh----cCCcEEEEecc
Confidence             27899999997 689999999999999999999999999987 999999999853321 11111    23459999999


Q ss_pred             hhhcc-cccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHh
Q 019868          283 KRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAAL  326 (334)
Q Consensus       283 K~~gl-~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L  326 (334)
                      |.++- .|.+.|++++ ++++.+++...+..  ...++...+.+...|
T Consensus       192 K~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l  239 (378)
T TIGR01329       192 KFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI  239 (378)
T ss_pred             eeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC
Confidence            97753 3578999988 55666767655542  345555544444443

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.79  E-value=8.5e-18  Score=160.09  Aligned_cols=197  Identities=19%  Similarity=0.175  Sum_probs=149.9

Q ss_pred             CCCHHHHHHHhc-Cc----CCCCCCCcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCEEEEc
Q 019868          108 GPPPEVREALGQ-LK----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVDC  176 (334)
Q Consensus       108 ~~~~~v~~al~~-~~----~~~~Yp~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~----~gd~Vl~~  176 (334)
                      ++.|.+++++.+ +.    ....|+...  ..++++.+++++|++.+++++++|+++++..++..+.+    ++|+|++.
T Consensus        31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~  110 (371)
T PRK13520         31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP  110 (371)
T ss_pred             CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence            355777777654 21    112233322  26799999999998877899999999999998876653    57999999


Q ss_pred             CCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       177 ~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      ++.|..+...++..|++++.++.++++.+|+++++++++ +++++|++++++|+||.+.+.+++.++++. ++++++|++
T Consensus       111 ~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a  189 (371)
T PRK13520        111 ESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAA  189 (371)
T ss_pred             CcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEec
Confidence            999999998888899999999977777899999999997 567788888899999999999999999987 999999999


Q ss_pred             CcCccCC--CCchh-hhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHH
Q 019868          256 YTEFSGL--ESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLW  306 (334)
Q Consensus       256 y~~~~~~--~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~  306 (334)
                      |..+...  ..... ......-..+..|..| |+++|.++|++++ ++++++.+.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~  243 (371)
T PRK13520        190 FGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALA  243 (371)
T ss_pred             chhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhc
Confidence            9866421  11100 0111122355567788 7778899998876 666777664

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.79  E-value=7.7e-18  Score=161.15  Aligned_cols=185  Identities=18%  Similarity=0.190  Sum_probs=143.4

Q ss_pred             HHHHhc-CcCCCCCCCcC-hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHC
Q 019868          114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN  190 (334)
Q Consensus       114 ~~al~~-~~~~~~Yp~~g-~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~  190 (334)
                      .+++.+ +..+..|+... ..++.+.++++++.  +++++++|+++++.+++..+ +++||+|+++.|+|..+...+...
T Consensus        14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~   91 (375)
T PRK11706         14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR   91 (375)
T ss_pred             HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence            444443 33334455443 46788889999886  58999999999999887765 689999999999999999999999


Q ss_pred             CCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchh
Q 019868          191 GAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME  267 (334)
Q Consensus       191 G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~  267 (334)
                      |++++.++.+ +++.+|+++++++++ +++++|+++   |++|...+.+++.++++. +++||+|++|+.+. +.+....
T Consensus        92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g  167 (375)
T PRK11706         92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG  167 (375)
T ss_pred             CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence            9999999865 347899999999997 589999976   469999999999999987 99999999998776 3332222


Q ss_pred             hhcCCCcEEEEcCCc--hhhcccccchheeEcCHHHHHHHHHhc
Q 019868          268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       268 ~~~~~~~~i~i~S~S--K~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      ...    .+.+.||.  |.++ +|.|.++++.+++++++++..+
T Consensus       168 ~~~----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~  206 (375)
T PRK11706        168 TIG----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIR  206 (375)
T ss_pred             cCc----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHH
Confidence            111    24445554  9987 5888888888889888766554

>PRK05939 hypothetical protein; Provisional

Probab=99.79  E-value=4.6e-18  Score=163.50  Aligned_cols=158  Identities=19%  Similarity=0.202  Sum_probs=128.2

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFS  204 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~  204 (334)
                      ++....|++++|++.|.. ..++++ +++.++..++.+++++||+|+++++.|+.+.   ..+...|++++.++.     
T Consensus        46 ~p~~~~lE~~la~leg~~-~~v~~s-sG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-----  118 (397)
T PRK05939         46 TPTTAALEAKITKMEGGV-GTVCFA-TGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-----  118 (397)
T ss_pred             CHHHHHHHHHHHHHhCCC-eEEEeC-CHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-----
Confidence            344669999999999864 345554 4589999999999999999999999997543   345568999999874     


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK  283 (334)
                      .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|.....    . .....+.++++.|+||
T Consensus       119 ~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----~-~~~~~gaDivv~S~sK  192 (397)
T PRK05939        119 TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----F-RPKDVGASLVINSLSK  192 (397)
T ss_pred             CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----c-CccccCCEEEEecCee
Confidence            37899999997 689999999999999999999999999987 999999999863221    0 1112356799999999


Q ss_pred             hhcccccchheeEcC
Q 019868          284 RAGLAGLRVGYGAFP  298 (334)
Q Consensus       284 ~~gl~G~R~G~l~~~  298 (334)
                      .++..|.++|+++++
T Consensus       193 ~~~g~g~~igg~v~~  207 (397)
T PRK05939        193 YIAGHGNALGGAVTD  207 (397)
T ss_pred             cccCCCCeEEEEEec
Confidence            999889999998774

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.79  E-value=4.1e-18  Score=163.06  Aligned_cols=186  Identities=20%  Similarity=0.151  Sum_probs=142.3

Q ss_pred             CCCHHHHHHHhc-CcCCCCCCCc----------ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc---CCCCEE
Q 019868          108 GPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL---DPGDKI  173 (334)
Q Consensus       108 ~~~~~v~~al~~-~~~~~~Yp~~----------g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~---~~gd~V  173 (334)
                      ++++.+.+++.+ +.....+|..          ...++|+.+++++|+++++|++|+|+++++..++..++   .+||+|
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~v   89 (379)
T TIGR03402        10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHI   89 (379)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeE
Confidence            456778888765 2211222211          14578899999999999999999999999999988764   457899


Q ss_pred             EEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCe
Q 019868          174 VDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (334)
Q Consensus       174 l~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~  249 (334)
                      ++....|+.+...   ++..|++++.++.++++.+|++++++.++ ++++++++++++||||.+++.+++.++++. +++
T Consensus        90 v~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~  168 (379)
T TIGR03402        90 ITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIGEIAKERGAL  168 (379)
T ss_pred             EEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHHHHHHHcCCE
Confidence            9999888765433   33479999999876677899999999997 689999999999999999999999999987 999


Q ss_pred             EEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       250 lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +++|+++.....   . -.+...+-.+++.|.+|.+|.+|  +|+++++++
T Consensus       169 vivD~~~~~g~~---~-~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~  213 (379)
T TIGR03402       169 FHTDAVQAVGKI---P-IDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKG  213 (379)
T ss_pred             EEEECccccccc---c-cCcccCCCCEEEEcHHHcCCCCc--eEEEEECCC
Confidence            999999874211   1 11122344588889999766556  788877654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.79  E-value=3.3e-18  Score=162.74  Aligned_cols=192  Identities=17%  Similarity=0.130  Sum_probs=144.4

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCe-EEEeeCCCC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD  202 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~-v~~v~~~~~  202 (334)
                      .+|+++...+|++++|++.+  .+++++++|+++++.+++. ++++||+|+++.+.|......+...... -+.+    .
T Consensus        49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~  121 (364)
T PRK07269         49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T  121 (364)
T ss_pred             eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence            55688889999999999997  5689999999999999995 6799999999999997544433221000 0111    2


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      +..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.    .....++++|+
T Consensus       122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~  195 (364)
T PRK07269        122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA  195 (364)
T ss_pred             ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence            3468999999997 689999999999999999999999999987 9999999997533221 222    22345999999


Q ss_pred             chhhccccc-chheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          282 SKRAGLAGL-RVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G~-R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++-.|- =.|++++ ++++++.++..+..  ..++++..+.+...|+.
T Consensus       196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t  246 (364)
T PRK07269        196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT  246 (364)
T ss_pred             ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc
Confidence            998864332 3578777 56777777654433  45788888877777765

>PRK05968 hypothetical protein; Provisional

Probab=99.79  E-value=1.1e-17  Score=160.64  Aligned_cols=190  Identities=19%  Similarity=0.164  Sum_probs=147.5

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~  200 (334)
                      +|+++...+|++++|+++|.+ +.+++ ++++.++..++.+++++||+|+++.+.|..    +...+...|++++.++. 
T Consensus        59 r~~~p~~~~le~~lA~l~g~~-~av~~-~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-  135 (389)
T PRK05968         59 RGDNPTVRAFEEMLAKLEGAE-DARGF-ASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG-  135 (389)
T ss_pred             CCCChhHHHHHHHHHHHhCCC-cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence            345666889999999999975 33444 555689998888889999999999999974    33456668999998863 


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          .|++++++++  +++|+|++++|.||++...+.+++.++++. ++++|+|++|..+....+ ..    .+..+++.
T Consensus       136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~~----~g~Divv~  204 (389)
T PRK05968        136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-IT----LGVDLVIH  204 (389)
T ss_pred             ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-hh----cCCcEEEe
Confidence                2789999888  368999999999999999999999999887 999999999976553221 11    23358999


Q ss_pred             CCchhhcccc-cchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhcC
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQN  328 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~~  328 (334)
                      |++|.++.+| .+.|+++.++++++++++....   ..++++.++.+...|+.
T Consensus       205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t  257 (389)
T PRK05968        205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT  257 (389)
T ss_pred             eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc
Confidence            9999987654 6889999999988887754332   35677777777776664

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.77  E-value=4e-17  Score=157.04  Aligned_cols=221  Identities=14%  Similarity=0.157  Sum_probs=153.3

Q ss_pred             ecCCCC-CCCCCCHHHHHHHhc-Cc-CC-------CCCCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           99 KIDANE-NPYGPPPEVREALGQ-LK-FP-------YIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        99 ~l~~~~-~~~~~~~~v~~al~~-~~-~~-------~~Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      +|+.++ -.+...|+++++..+ +. ++       ..|.. .+..+|++++|++++.+ +.+++++|.++.. .++.+++
T Consensus         2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~   79 (392)
T PLN03227          2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFA   79 (392)
T ss_pred             CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhC
Confidence            344432 345566777766543 21 11       22543 35789999999999975 6788888888777 5666689


Q ss_pred             CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc----------cCCceEEEEeCCCCccccCCcH
Q 019868          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~----------~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ++||.|+++++.|..+...+...+++++.++..+  .-|++.+.+.+.          ..++++|++.++.||+|.+.+.
T Consensus        80 ~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l  157 (392)
T PLN03227         80 KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPL  157 (392)
T ss_pred             CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCH
Confidence            9999999999999998887777888888776431  113444444442          1357889999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCcc-CCC--C-chhhh---cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFS-GLE--S-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~-~~~--~-~~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++.++++. ++++|+||+|. +. .+.  . .....   ...+.++++.|+||.+|   ++.|++++++++++.+....
T Consensus       158 ~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~~~  233 (392)
T PLN03227        158 KELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRLSG  233 (392)
T ss_pred             HHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHHhC
Confidence            999999987 99999999997 33 111  1 11111   12345799999999765   55599999999888776443


Q ss_pred             CC--CCC--cHHHHHHHHHHhc
Q 019868          310 QP--YNV--SVAAEVAACAALQ  327 (334)
Q Consensus       310 ~~--~~~--~~~~q~aa~~~L~  327 (334)
                      ..  ++.  ++..+.++.+++.
T Consensus       234 ~~~~~~~~~~p~~~~aa~~al~  255 (392)
T PLN03227        234 SGYCFSASAPPFLAKADATATA  255 (392)
T ss_pred             cCccccCCCCHHHHHHHHHHHH
Confidence            32  333  4666666665553

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.77  E-value=1.3e-17  Score=162.07  Aligned_cols=231  Identities=21%  Similarity=0.210  Sum_probs=157.8

Q ss_pred             CCCCCCeeecCCCCCC--CC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++.++|+..|...  ++ .+|++.+++.+ +.....|  +..+..+|+++|+++++. .++|++++|+++++..+++
T Consensus        44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk  122 (423)
T TIGR00713        44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR  122 (423)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence            3467789999877533  33 56888888775 3322233  566789999999998864 3689999999999999888


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHHHH---CCCeEEEeeCC----C-----CC---CCCHHHHHHhccc--CCceEEEEe
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRK----S-----DF---SLNVELIADAVER--EKPKCIFLT  225 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~G~~v~~v~~~----~-----~~---~~d~~~l~~~l~~--~~~~~i~l~  225 (334)
                      ...  ...++|+..+++|..+...+..   .|......+..    .     ..   .-|++++++.+++  .++++|++.
T Consensus       123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e  202 (423)
T TIGR00713       123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE  202 (423)
T ss_pred             HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence            532  3458999999999876543322   11111111100    0     00   0278999988863  467888886


Q ss_pred             -CCCCccccCCc-HH---HHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868          226 -SPNNPDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       226 -~p~NPtG~~~~-~~---~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                       .|+| +|.+.+ .+   ++.++++. ++++|+||+|.+|..+... .........   +.+|||.++ +|+|+||++++
T Consensus       203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~  277 (423)
T TIGR00713       203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR  277 (423)
T ss_pred             CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence             8888 898887 34   44555554 9999999999888532211 111111122   347999999 99999999999


Q ss_pred             HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868          299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       299 ~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++.+....     ..++.++++++++.++|+
T Consensus       278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~  311 (423)
T TIGR00713       278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK  311 (423)
T ss_pred             HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence            99999886321     236789999999888886

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK07505 hypothetical protein; Provisional

Probab=99.77  E-value=4.2e-17  Score=157.42  Aligned_cols=224  Identities=15%  Similarity=0.134  Sum_probs=151.8

Q ss_pred             CCCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC--CC------CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           92 RKPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP--YI------YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        92 ~~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~--~~------Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      .++..++|+..+.+ .+..+|++++++.+ +. .+  ..      +......+++++|+++++.  +.+++++|+ ++..
T Consensus        43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG~-~a~~  119 (402)
T PRK07505         43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSCS-AAHL  119 (402)
T ss_pred             cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECChH-HHHH
Confidence            45677899976432 22457888888765 32 11  11      1122356899999999986  555566555 5666


Q ss_pred             HHHHHhc----CCCC-EEEEcCCCC-hhHHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          161 LIMRCVL----DPGD-KIVDCPPTF-TMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       161 ~~~~~l~----~~gd-~Vl~~~p~y-~~~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      .++..+.    .+|+ .|++.+..| +.+..  .....+.+++.+|.     .|++.++++++ ++++++++++|+||||
T Consensus       120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G  193 (402)
T PRK07505        120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG  193 (402)
T ss_pred             HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence            6665322    2232 355666544 33221  11224567777764     38899999886 4678999999999999


Q ss_pred             cCCcHHHHHHHHhC-CCeEEEccCCcCccC--CCC--chhhhc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHH
Q 019868          233 SIINDEDLLKILEM-PILVVLDEAYTEFSG--LES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY  304 (334)
Q Consensus       233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~--~~~--~~~~~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~  304 (334)
                      .+++.+++.++++. ++++|+||+|....+  .+.  ......  ..+++++++||||.||++|   ||+++ ++++++.
T Consensus       194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~  270 (402)
T PRK07505        194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL  270 (402)
T ss_pred             CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence            99999999999987 999999999854322  111  112222  3678999999999999776   88875 7889998


Q ss_pred             HHHhcCCC----CCcHHHHHHHHHHhc
Q 019868          305 LWRAKQPY----NVSVAAEVAACAALQ  327 (334)
Q Consensus       305 l~~~~~~~----~~~~~~q~aa~~~L~  327 (334)
                      +.+...++    +++++++.++.++|+
T Consensus       271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~  297 (402)
T PRK07505        271 ILRYAGPLAFSQSLNVAALGAILASAE  297 (402)
T ss_pred             HHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence            88766654    456778888887776

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=8.9e-18  Score=162.81  Aligned_cols=160  Identities=19%  Similarity=0.210  Sum_probs=128.6

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKS  201 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~  201 (334)
                      ++++...+|++++|++.|.  +..++++++++++..++.+++++||+|+++.+.|+.....+..    .|+++..++.  
T Consensus        55 ~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~--  130 (425)
T PRK06084         55 IMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH--  130 (425)
T ss_pred             CCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC--
Confidence            3566788999999999984  3566777777999999999999999999999999843333322    5667666652  


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                         .|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+|++|...... .+.    ..+.++++.|
T Consensus       131 ---~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~S  201 (425)
T PRK06084        131 ---DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVHS  201 (425)
T ss_pred             ---CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEEC
Confidence               38999999997 589999999999999999999999999987 9999999999743321 111    2345699999


Q ss_pred             CchhhcccccchheeEcC
Q 019868          281 FSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       281 ~SK~~gl~G~R~G~l~~~  298 (334)
                      ++|.++.+|.++|.+++.
T Consensus       202 ~tK~l~G~g~~~gG~v~~  219 (425)
T PRK06084        202 LTKYIGGHGTSIGGIVVD  219 (425)
T ss_pred             chhcccccccceeEEEEe
Confidence            999999899999987763

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.77  E-value=1.7e-17  Score=159.90  Aligned_cols=228  Identities=14%  Similarity=0.158  Sum_probs=155.1

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++++++|+..|.  ..++ ..|++.+++.+ +..   .. .+..+...+|.++++++.+.  +.+++++++++++..+
T Consensus        36 d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~A  113 (396)
T PRK04073         36 DPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETA  113 (396)
T ss_pred             ECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHH
Confidence            34677889986653  2343 46888888765 321   11 12333456788888887763  6899999999999998


Q ss_pred             HHHhcC---------CC-CEEEEcCCCChhHH-HHHHHCCCe------------EEEeeCCCCCCCCHHHHHHhcccCCc
Q 019868          163 MRCVLD---------PG-DKIVDCPPTFTMYE-FDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKP  219 (334)
Q Consensus       163 ~~~l~~---------~g-d~Vl~~~p~y~~~~-~~~~~~G~~------------v~~v~~~~~~~~d~~~l~~~l~~~~~  219 (334)
                      ++....         +| ++|+..+-+|.... ......+..            +..++.     .|++++++.++ +++
T Consensus       114 lk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~-~~~  187 (396)
T PRK04073        114 IKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT-PNT  187 (396)
T ss_pred             HHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc-cCe
Confidence            885531         34 67877776665433 332222211            122221     27899999886 578


Q ss_pred             eEEEEeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          220 KCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      ++|+++.++||||.+++.    +++.++++. ++++|+||+|.+|...+.... ....+...-+.+|||.+|.+|+|+||
T Consensus       188 ~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi~~~sK~lg~gg~~ig~  266 (396)
T PRK04073        188 AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDMYILGKALGGGVFPISC  266 (396)
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCEEEecccccCCCCcceE
Confidence            999999999999999874    456666665 999999999998765332221 11111111233589999988899999


Q ss_pred             eEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       295 l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++++.+.+..  ..++.++++++++.++|+
T Consensus       267 ~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~  301 (396)
T PRK04073        267 VAANRDILGVFTPGSHGSTFGGNPLACAVSIAALE  301 (396)
T ss_pred             EEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999999999886533  347889999999999996

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.76  E-value=9.7e-17  Score=151.94  Aligned_cols=224  Identities=21%  Similarity=0.226  Sum_probs=169.4

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC-----CC--CCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~-----~~--Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      +.++++|+.|+. .+...|+++++..+ +. ++     .+  ++.. -..+|.+.||+|+|.+ +-+++++|-. +...+
T Consensus        38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e-~al~f~SGy~-AN~~~  115 (388)
T COG0156          38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAE-AALLFSSGFV-ANLGL  115 (388)
T ss_pred             CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC-cEEEEcccch-hHHHH
Confidence            466899988764 56777888877654 21 11     11  2222 2568999999999964 4566666665 56667


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +.+|++++|.|+...-.|.+....++..+++++.++.     -|+++|++.+++.     +.++|+........|.+.+.
T Consensus       116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL  190 (388)
T COG0156         116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL  190 (388)
T ss_pred             HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence            7779999999999999999999999999999999874     3789999888641     24666666999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCCchhh---h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~---~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +++.+|++. +.++++||+|+-...++.-...   .  ...+.+|+++||||+||..|   ||+.++..+++.+.+...+
T Consensus       191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~  267 (388)
T COG0156         191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP  267 (388)
T ss_pred             HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence            999999998 9999999999877654332221   1  12455899999999999888   9999999999999887666


Q ss_pred             C----CCcHHHHHHHHHHhc
Q 019868          312 Y----NVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ~----~~~~~~q~aa~~~L~  327 (334)
                      |    ++++...+++.++|+
T Consensus       268 ~ifStalpP~~aaa~~~al~  287 (388)
T COG0156         268 FIFSTALPPAVAAAALAALR  287 (388)
T ss_pred             eeccCCCCHHHHHHHHHHHH
Confidence            2    356665555555554

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.75  E-value=6.9e-17  Score=154.64  Aligned_cols=174  Identities=14%  Similarity=0.153  Sum_probs=132.5

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~  199 (334)
                      .+|+++....|++++|++.|.+ ..+++++| +.++..++. ++++||+|++++|.|+..    ...+...|+++..++.
T Consensus        45 ~r~~~p~~~~Le~~la~l~g~~-~al~~~SG-~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~  121 (380)
T PRK06176         45 SRSGNPTRFALEELIADLEGGV-KGFAFASG-LAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT  121 (380)
T ss_pred             cCCCChhHHHHHHHHHHHhCCC-CEEEECCH-HHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence            3456667889999999999954 34666555 568877664 789999999999999743    3345568988888763


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|.......+ .    ..+..+++
T Consensus       122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p-~----~~gaDivv  190 (380)
T PRK06176        122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP-L----LLGADIVV  190 (380)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc-c----ccCCCEEE
Confidence                 37999999997 689999999999999999999999999988 999999999986443221 1    22445999


Q ss_pred             cCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC
Q 019868          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP  311 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~  311 (334)
                      .|++|.++.+| .-.|+++.+ +++.+.+...+..
T Consensus       191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~  225 (380)
T PRK06176        191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNA  225 (380)
T ss_pred             ecCceeccCCccceeeEEEecHHHHHHHHHHHHHH
Confidence            99999987555 345777774 5666666554443

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.75  E-value=2.4e-17  Score=155.50  Aligned_cols=174  Identities=18%  Similarity=0.106  Sum_probs=133.6

Q ss_pred             CCC-CCcChHHHHHHHHHh----cCCC--CCCEEEeCCHHHHHHHHHHHhcC------------C--CCEEEEcCCCChh
Q 019868          124 YIY-PDPESRRLRAALAKD----SGLE--SDHILVGCGADELIDLIMRCVLD------------P--GDKIVDCPPTFTM  182 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~lA~~----~~~~--~~~I~~t~G~~~~i~~~~~~l~~------------~--gd~Vl~~~p~y~~  182 (334)
                      ..| ..++..+++++++++    +|++  .+++++|+|+++++..++.++..            +  ++.|++++++|..
T Consensus        28 ~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~  107 (345)
T cd06450          28 FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS  107 (345)
T ss_pred             cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence            336 345666777766554    5774  45899999999999999987742            2  3478889999999


Q ss_pred             HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCC
Q 019868          183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (334)
Q Consensus       183 ~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay  256 (334)
                      +...+...|++++.++.++++.+|++++++++++     .++++|++++|+||||.+.+.+++.++++. ++++++|++|
T Consensus       108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~  187 (345)
T cd06450         108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAY  187 (345)
T ss_pred             HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechh
Confidence            9888888899999999766678999999999863     167889999999999999999999999987 9999999999


Q ss_pred             cCccCCCC-chhhhcC-CCcEEEEcCCchhhcccccchheeEcC
Q 019868          257 TEFSGLES-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       257 ~~~~~~~~-~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      ..+..... ....... .+-+.+..|++|.++ ++.|+|+++++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~  230 (345)
T cd06450         188 GGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR  230 (345)
T ss_pred             hHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH
Confidence            87663211 1110111 123467789999554 77889998765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.75  E-value=4.1e-17  Score=153.11  Aligned_cols=199  Identities=19%  Similarity=0.173  Sum_probs=158.5

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhcCc-----CC-CC-C---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQLK-----FP-YI-Y---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~-----~~-~~-Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+.+.+.|+.+.. -+.++.|.+++....     .. .. |   +..+.++.|+.+|++++.++.+|++|+|+|++++++
T Consensus        40 ~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv  118 (428)
T KOG1549|consen   40 HGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV  118 (428)
T ss_pred             CCCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence            3456677776543 345688888877521     11 22 3   123478899999999999998999999999999999


Q ss_pred             HHHhc-CCCC----EEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          163 MRCVL-DPGD----KIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      ++.+. ..+|    .|++..-.|+.....+   +..|+++..+|.++++..|++.+++.++ ++++++.+.+.+|.+|.+
T Consensus       119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~  197 (428)
T KOG1549|consen  119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL  197 (428)
T ss_pred             HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence            99875 3455    8999998888655443   4479999999987888899999999998 799999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      .|.+|+.++++. ++.+++|.+++-    +...-.+.+-+-.++..|.+|.||.+|  +|++++.+
T Consensus       198 ~Pv~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~  257 (428)
T KOG1549|consen  198 QPVKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR  257 (428)
T ss_pred             ccHHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence            999999999998 899999999873    233333344455688899999999999  99999875

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.74  E-value=7e-17  Score=154.51  Aligned_cols=191  Identities=14%  Similarity=0.119  Sum_probs=141.0

Q ss_pred             CCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEE
Q 019868          124 YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVK  196 (334)
Q Consensus       124 ~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~  196 (334)
                      +.|.   ++....|++.++.+.+ ..+.|++ +++++++..++.+++++||+|++++|.|+.+..    .++..|+++..
T Consensus        56 y~YsR~gnPt~~~Le~~la~le~-~~~~v~~-sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~  133 (395)
T PRK05967         56 YTYGTRGTPTTDALCKAIDALEG-SAGTILV-PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY  133 (395)
T ss_pred             CccCCCCChHHHHHHHHHHHHhC-CCCEEEE-CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence            4454   3345579999988776 2344555 556899999999999999999999999998764    34668999988


Q ss_pred             eeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868          197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (334)
Q Consensus       197 v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~  275 (334)
                      ++..     +.+.++++++ +++|+|++++|+||+|.+.+.+++.++++. ++++|+|++|.....- .+.    +.+..
T Consensus       134 vd~~-----~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~pl----~~GaD  202 (395)
T PRK05967        134 YDPE-----IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RPL----DFGVD  202 (395)
T ss_pred             eCCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Chh----HcCCC
Confidence            8632     3578999987 689999999999999999999999999987 9999999999753321 111    23556


Q ss_pred             EEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          276 IVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       276 i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +++.|.+|.++ -.+...|+++.+++.++.+......  ..+++...+.+...|+
T Consensus       203 ivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~  257 (395)
T PRK05967        203 ISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLR  257 (395)
T ss_pred             EEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc
Confidence            99999999753 3457788888888776666533322  3456665555544443

>PLN02509 cystathionine beta-lyase

Probab=99.72  E-value=3e-16  Score=153.02  Aligned_cols=191  Identities=17%  Similarity=0.204  Sum_probs=138.7

Q ss_pred             CCCCC---cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEE
Q 019868          124 YIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVK  196 (334)
Q Consensus       124 ~~Yp~---~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~  196 (334)
                      +.|..   +....|.+.+|++.+  .++.++++|+++++..++. ++++||+|++++|.|+.+..    .....|++++.
T Consensus       125 ~~Y~r~gnpt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~  201 (464)
T PLN02509        125 YDYTRSGNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKR  201 (464)
T ss_pred             CccCCCCCHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEE
Confidence            45643   335678888888877  4567777888889877664 78999999999999998763    34468999988


Q ss_pred             eeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868          197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (334)
Q Consensus       197 v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~  275 (334)
                      ++.     .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.    ..+.+
T Consensus       202 vd~-----~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaD  270 (464)
T PLN02509        202 VNT-----TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGAD  270 (464)
T ss_pred             eCC-----CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCc
Confidence            863     37899999996 689999999999999999999999999987 9999999998644321 111    22346


Q ss_pred             EEEcCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          276 IVLRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       276 i~i~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ++++|++|.++-+| .-.|+++++ +.+.+.+...+..  ..+++...+++...|+.
T Consensus       271 ivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t  327 (464)
T PLN02509        271 IVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT  327 (464)
T ss_pred             EEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh
Confidence            99999999876433 335777764 4454544333222  34566666666666553

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.72  E-value=8.3e-16  Score=145.27  Aligned_cols=170  Identities=18%  Similarity=0.186  Sum_probs=135.7

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS  204 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~  204 (334)
                      ..+...+++++++++++.  +++++++|+++++..++..+ +++||+|+++.++|..+...+...|++++.++.+. ++.
T Consensus        16 ~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   93 (352)
T cd00616          16 LGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYN   93 (352)
T ss_pred             CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCC
Confidence            455688999999999995  46888889999999999988 58999999999999999888889999999999665 788


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCCc
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~S  282 (334)
                      +|++++++.++ +++++|+++   |++|...+.+++.++++. ++++|+|++|..... .....   +.. ..+.+.||+
T Consensus        94 ~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~---~~~-~d~~~~S~~  165 (352)
T cd00616          94 IDPELIEAAIT-PRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKV---GTF-GDAGAFSFH  165 (352)
T ss_pred             cCHHHHHHhcC-cCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEc---ccC-cceeEEcCC
Confidence            99999999996 689999976   479999999999999987 999999999975432 11111   111 236777776


Q ss_pred             --hhhcccccchheeEcC-HHHHHHHHHh
Q 019868          283 --KRAGLAGLRVGYGAFP-LSIIEYLWRA  308 (334)
Q Consensus       283 --K~~gl~G~R~G~l~~~-~~~i~~l~~~  308 (334)
                        |.+  ++.+.|+++.+ +++++.+...
T Consensus       166 ~~K~~--~~~~gg~~~~~~~~~~~~~~~~  192 (352)
T cd00616         166 PTKNL--TTGEGGAVVTNDEELAERARLL  192 (352)
T ss_pred             CCCCC--cccCceEEEECCHHHHHHHHHH
Confidence              876  44456888875 5777766543

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.71  E-value=7.9e-16  Score=149.81  Aligned_cols=198  Identities=15%  Similarity=0.125  Sum_probs=143.6

Q ss_pred             eecCCCCCCCCCC------HHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-----
Q 019868           98 VKIDANENPYGPP------PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-----  166 (334)
Q Consensus        98 i~l~~~~~~~~~~------~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-----  166 (334)
                      ..|+.|+++.+..      +++.+....+.....+..+...+|++++|++++.+  ++++++|+++++..++.++     
T Consensus        26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~  103 (438)
T PRK15407         26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGRFNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKL  103 (438)
T ss_pred             ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCChhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccc
Confidence            3467777655432      23333333232212122234689999999999964  7899999999999988866     


Q ss_pred             ----cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          167 ----LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       167 ----~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                          +++||+|+++.++|..+...+...|++++.++.+ +++.+|++.++++++ +++++|++++   ++|...+.+++.
T Consensus       104 ~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~-~~tkaVi~~~---~~G~p~dl~~I~  179 (438)
T PRK15407        104 GDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVS-PKTKAIMIAH---TLGNPFDLAAVK  179 (438)
T ss_pred             cccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcC-cCCeEEEEeC---CCCChhhHHHHH
Confidence                4789999999999999999999999999999864 578899999999997 6899999876   467778999999


Q ss_pred             HHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHH
Q 019868          242 KILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWR  307 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~  307 (334)
                      ++++. +++||+|++|+... +.+......+    .+.+.||  +|.+. +|. .|+++++ +++.+.++.
T Consensus       180 ~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g----d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~  244 (438)
T PRK15407        180 AFCDKHNLWLIEDNCDALGSTYDGRMTGTFG----DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIES  244 (438)
T ss_pred             HHHHHCCCEEEEECccchhhhcCCeeeeccC----ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHH
Confidence            99987 99999999998765 2332222222    2566677  56664 354 4898885 455555443

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.71  E-value=4.5e-16  Score=150.14  Aligned_cols=227  Identities=15%  Similarity=0.125  Sum_probs=153.2

Q ss_pred             CCCCCeeecCCCCCCCC---CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..+.....   ..|++.+++.+ +..   .. .++.....+|.+.++++.+.  +.+++++++++++..++
T Consensus        38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al  115 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI  115 (401)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence            35677899876643333   26888887765 321   11 12334467899999998874  58999999999999999


Q ss_pred             HHhcC---------CC-CEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +.+..         +| ++|++..-.|......+...+.             .+..++     ..|++.+++.+. ++++
T Consensus       116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~  189 (401)
T PRK00854        116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV  189 (401)
T ss_pred             HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence            87642         23 6777777766543322222221             222232     137899999997 6899


Q ss_pred             EEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccchhe
Q 019868          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      +|++++|+||+|.+++    .+++.++++. ++++|+||+|.++...+..... .......+++  ++|.++...+|+||
T Consensus       190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~--~~K~l~gg~~~ig~  267 (401)
T PRK00854        190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL--IGKALSGGFYPVSA  267 (401)
T ss_pred             EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE--ecccccCCccCeEE
Confidence            9999999999999997    5555556665 9999999999877554321111 1111112333  47988744479999


Q ss_pred             eEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       295 l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++++.+.....  .++.+++.++++.++|+.
T Consensus       268 v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~  303 (401)
T PRK00854        268 VLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV  303 (401)
T ss_pred             EEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            9999999987764332  266799999999998853

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=3.1e-16  Score=152.32  Aligned_cols=158  Identities=18%  Similarity=0.223  Sum_probs=127.1

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~  202 (334)
                      +++....|++.+|++.|.+  ..++++++++++..++.+++++||+|+++.+.|...    ...+...|++++.++.   
T Consensus        61 ~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~---  135 (427)
T PRK05994         61 TNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA---  135 (427)
T ss_pred             CCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC---
Confidence            4555788999999999865  477778888999999999999999999999999843    3445678999998874   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                        .|++.++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.    ..+-.+++.|+
T Consensus       136 --~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl----~~gaDivv~S~  207 (427)
T PRK05994        136 --DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPI----EHGADIVVHSL  207 (427)
T ss_pred             --CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Ccc----ccCCcEEEEcC
Confidence              27899999997 689999999999999999999999999987 9999999999732211 111    23455999999


Q ss_pred             chhhcccccchheeEc
Q 019868          282 SKRAGLAGLRVGYGAF  297 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~  297 (334)
                      +|.+|-+|-.+|.+++
T Consensus       208 tK~lgg~~~~~gG~v~  223 (427)
T PRK05994        208 TKFLGGHGNSMGGIIV  223 (427)
T ss_pred             ccccCCCCCcEEEEEE
Confidence            9988766655665444

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.71  E-value=7e-16  Score=147.83  Aligned_cols=173  Identities=15%  Similarity=0.110  Sum_probs=134.7

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFS  204 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~  204 (334)
                      ..+...+||++++++++.+  +.++++|+++++..++.++ +++||+|+++.++|..+...+...|++++.++.+ +++.
T Consensus        27 ~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  104 (380)
T TIGR03588        27 QGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGN  104 (380)
T ss_pred             CChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCC
Confidence            4556889999999999974  5666778899999999988 7899999999999999988888999999999963 4678


Q ss_pred             CCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEc
Q 019868          205 LNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       205 ~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~  279 (334)
                      +|++++++.+++   +++++|++   .|++|...+.+++.++++. +++||+|++++... +++......  ..-.+.+.
T Consensus       105 ~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~--~~~d~~~~  179 (380)
T TIGR03588       105 IDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNC--RYADATVF  179 (380)
T ss_pred             cCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCc--cccceEEE
Confidence            999999999963   47888885   4578999999999999987 99999999998653 222222210  01247777


Q ss_pred             CCc--hhhcccccchheeEc-CHHHHHHHHHh
Q 019868          280 TFS--KRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (334)
Q Consensus       280 S~S--K~~gl~G~R~G~l~~-~~~~i~~l~~~  308 (334)
                      ||+  |.++. | ..|+++. ++++.++++..
T Consensus       180 S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~  209 (380)
T TIGR03588       180 SFHPVKIITT-A-EGGAVTTNDEELAERMRLL  209 (380)
T ss_pred             ecCCCCcccc-c-CceEEEECCHHHHHHHHHH
Confidence            775  87753 3 4677776 56777766543

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.71  E-value=5e-16  Score=148.59  Aligned_cols=230  Identities=14%  Similarity=0.126  Sum_probs=157.5

Q ss_pred             CCCCCeeecCCC--CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhc
Q 019868           92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~  167 (334)
                      .++..++|+..|  ...++..|++.+++.+ +.....++.....++++++++.+.-.++ .++++++++++...+++...
T Consensus        26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar  105 (375)
T PRK04260         26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR  105 (375)
T ss_pred             CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence            356778999766  4456778889988876 3332334444456788899987643444 36888999999998887542


Q ss_pred             --CCCCEEEEcCCCChhHH-HHHHHCCCeEE---------EeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          168 --DPGDKIVDCPPTFTMYE-FDAAVNGAAVV---------KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       168 --~~gd~Vl~~~p~y~~~~-~~~~~~G~~v~---------~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                        .++++|+..+..|.... ......|.+..         .++.. . ..|++.+++.+. +++.+|++..++|++|...
T Consensus       106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~  182 (375)
T PRK04260        106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-I-FNDLNSVKALVN-KNTAAVMLELVQGESGVLP  182 (375)
T ss_pred             HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-C-CCCHHHHHHhcC-CCeEEEEECCeECCCCCcC
Confidence              45678888888876432 23222222111         01100 0 138899999886 5778999999999999987


Q ss_pred             c----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          236 N----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       236 ~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      +    .+++.++++. ++++|+||+|.++...+....  .....+.   +.||||.++ +|+|+||+++++++.+.+...
T Consensus       183 ~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~  258 (375)
T PRK04260        183 ADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYG  258 (375)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCC
Confidence            6    4666666765 999999999988764432222  1122222   338999998 899999999999998877643


Q ss_pred             c--CCCCCcHHHHHHHHHHhcC
Q 019868          309 K--QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 ~--~~~~~~~~~q~aa~~~L~~  328 (334)
                      .  ..++.+++.+.++.++|+.
T Consensus       259 ~~~~t~~~~~~~~~aa~a~l~~  280 (375)
T PRK04260        259 SHGSTFGGNKLSMAAASATLDI  280 (375)
T ss_pred             CCCCCCCcCHHHHHHHHHHHHH
Confidence            2  2367799999999999843

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.70  E-value=7.6e-16  Score=147.34  Aligned_cols=232  Identities=16%  Similarity=0.165  Sum_probs=152.7

Q ss_pred             CCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCC--CCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~--~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .+++.++|+..|..  .++ .+|++.+++.+ ++...........++++++++++.-  ..+.+++++++++++..+++.
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~  105 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL  105 (377)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence            45678899988752  233 56888888765 3321112222345677777777642  135899999999999999984


Q ss_pred             hc-CCC-CEEEEcCCCChhHHHH-HHHCCCeEE---EeeCCCC--C--CCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          166 VL-DPG-DKIVDCPPTFTMYEFD-AAVNGAAVV---KVPRKSD--F--SLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       166 l~-~~g-d~Vl~~~p~y~~~~~~-~~~~G~~v~---~v~~~~~--~--~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      .. .+| ++|++.++.|...... ....|....   ..+...+  +  .-|++.+++.+. +++++|++..+++++|...
T Consensus       106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~  184 (377)
T PRK02936        106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP  184 (377)
T ss_pred             HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence            32 234 6799998888743222 222222110   0010000  0  117899999886 6789999998899998874


Q ss_pred             -cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          236 -NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       236 -~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                       +.+.+++|.+   . ++++|+||+|.+|...+....  .....+.   +.+|||.++ +|+|+||+++++++++.+...
T Consensus       185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~  260 (377)
T PRK02936        185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG  260 (377)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence             6566655554   4 999999999988765433221  1111122   236999999 999999999999999887644


Q ss_pred             cC--CCCCcHHHHHHHHHHhcC
Q 019868          309 KQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 ~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ..  .++.++++|+++.++|+.
T Consensus       261 ~~~~t~~~~~~~~aaa~a~l~~  282 (377)
T PRK02936        261 SHGSTFGGNPLAMAAAKEVLQV  282 (377)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHH
Confidence            33  267899999999999864

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.70  E-value=7.1e-16  Score=148.95  Aligned_cols=225  Identities=16%  Similarity=0.217  Sum_probs=147.8

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++.++|+..|  ...++ .+|++.+++.+ +...    ..+......+|.+.|++..+  .+.++++++++++...++
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~  114 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF  114 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence            457778999765  33343 56888887765 3221    11122234578888888765  358999999999999998


Q ss_pred             HHhc--------CCCCEEEEcCCCChhHHH-HHHHCC------------CeEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868          164 RCVL--------DPGDKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (334)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i  222 (334)
                      +...        ...++|+..+-.|..... .....|            .+++.++.     -|++.+++.+. +++++|
T Consensus       115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aai  188 (403)
T PRK05093        115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAAVKAVID-DHTCAV  188 (403)
T ss_pred             HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----CCHHHHHHHhc-CCeEEE
Confidence            8431        123567777766654322 222111            12222321     17899999886 578888


Q ss_pred             EEeCCCCccccCC--cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868          223 FLTSPNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       223 ~l~~p~NPtG~~~--~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      +++ |.||+|.++  +.+.+++|++   . ++++|+||+|.++.+.+..... ...+-..-+.||||.++ +|+|+||++
T Consensus       189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~-~~~~~~pdi~s~sK~l~-~G~rig~vv  265 (403)
T PRK05093        189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAY-MHYGVTPDILTSAKALG-GGFPIGAML  265 (403)
T ss_pred             EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhh-hhcCCCCCEEEeccccc-CCcceEEEE
Confidence            877 888887765  6666666554   3 9999999999988654432211 11111111568999999 999999999


Q ss_pred             cCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          297 FPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       297 ~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++.+.....  .++.+++.|+++.++|+
T Consensus       266 ~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~  298 (403)
T PRK05093        266 TTAEIASHFKVGTHGSTYGGNPLACAVAEAVFD  298 (403)
T ss_pred             EcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99999988865333  36789999999888553

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.70  E-value=2.3e-15  Score=145.84  Aligned_cols=208  Identities=17%  Similarity=0.117  Sum_probs=148.2

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhc-C-cCCCCC-------CCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIY-------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~Y-------p~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++++|+.|+. .+...|+++++..+ + .++.+.       ... -..+|.++||++++.+  ..++.+.+..+...+
T Consensus       101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e--~all~sSGy~AN~~~  178 (476)
T PLN02955        101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKE--DCLVCPTGFAANMAA  178 (476)
T ss_pred             CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCC--cEEEECChHHHHHHH
Confidence            457899988754 67778888876554 2 122111       111 1368999999999953  445555555555555


Q ss_pred             HHHh--------------cCCCCEEEEcCCCChhHHHHHHHC----CCeEEEeeCCCCCCCCHHHHHHhccc--CCceEE
Q 019868          163 MRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKCI  222 (334)
Q Consensus       163 ~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i  222 (334)
                      +.++              .+++|.|+...-.|......++..    +++++.++..     |+++|++.++.  .+.++|
T Consensus       179 i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~V  253 (476)
T PLN02955        179 MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKVV  253 (476)
T ss_pred             HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceEE
Confidence            5555              245677888888888888777765    5777777642     78888887753  234566


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCc---hhhhc-CCCcEEEEcCCchhhcccccchheeEc
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      ++....+++|.+.+.+++.+|++. +.++|+||+|..+..++.-   ....+ ..+.+++++||||.+|+.|   ||+++
T Consensus       254 v~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~g  330 (476)
T PLN02955        254 VTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIAC  330 (476)
T ss_pred             EEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceeec
Confidence            656779999999999999999987 9999999999987754321   11111 2477899999999987777   99999


Q ss_pred             CHHHHHHHHHhcCC
Q 019868          298 PLSIIEYLWRAKQP  311 (334)
Q Consensus       298 ~~~~i~~l~~~~~~  311 (334)
                      ++++++.+......
T Consensus       331 s~~~~~~l~~~~~~  344 (476)
T PLN02955        331 SKKWKQLIQSRGRS  344 (476)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999998876665

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.70  E-value=7.7e-16  Score=142.08  Aligned_cols=205  Identities=18%  Similarity=0.240  Sum_probs=136.7

Q ss_pred             CCC-CC-cChHHHHHHHHHhcCCCCCCEEEeCCHH-HHHHHHHH-Hhc--CC----------CCEEEEcCCCChhHHHHH
Q 019868          124 YIY-PD-PESRRLRAALAKDSGLESDHILVGCGAD-ELIDLIMR-CVL--DP----------GDKIVDCPPTFTMYEFDA  187 (334)
Q Consensus       124 ~~Y-p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~-~~i~~~~~-~l~--~~----------gd~Vl~~~p~y~~~~~~~  187 (334)
                      +.| +. .|.+++|+.+|+.+|++++||++...++ ..+..++. +++  ..          .-+.++|.|+|.-+-.+.
T Consensus        62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~  141 (425)
T PF12897_consen   62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT  141 (425)
T ss_dssp             TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred             cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence            678 43 4899999999999999999999965554 33333322 221  11          237899999999999999


Q ss_pred             HHCCCeEEEeeCCCCCCCCHHHHHHhcc-cCCceEEEEe-CCCCccccCCcHHHHHHHHhC-----CCeEEEccCCcC--
Q 019868          188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTE--  258 (334)
Q Consensus       188 ~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-----~~~lIvDeay~~--  258 (334)
                      +.+|++.+.||+.++ ++|+|.+++.+. .+.+|.|++. --.||||.+++.|.+++++..     +..|+.|++|.-  
T Consensus       142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh  220 (425)
T PF12897_consen  142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH  220 (425)
T ss_dssp             HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred             HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence            999999999997655 899999999984 4678888865 458999999999999999975     899999999954  


Q ss_pred             ccCCCCc---hhh------hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          259 FSGLESR---MEW------VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       259 ~~~~~~~---~~~------~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +..+...   ...      .+..++++...|.||. ..+|-+++++.++++.++.+.+....  .+..-+.|..-...|+
T Consensus       221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~  299 (425)
T PF12897_consen  221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK  299 (425)
T ss_dssp             SSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred             ccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence            4322211   111      2457899999999995 46999999999999999988877654  5677788888888887


Q ss_pred             Cch
Q 019868          328 NPI  330 (334)
Q Consensus       328 ~~~  330 (334)
                      |.+
T Consensus       300 d~~  302 (425)
T PF12897_consen  300 DAE  302 (425)
T ss_dssp             SHH
T ss_pred             Chh
Confidence            744

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.69  E-value=1e-15  Score=148.73  Aligned_cols=158  Identities=15%  Similarity=0.173  Sum_probs=128.9

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~  202 (334)
                      ..+...+|++.+|++.|.+  ..++++++++++.+++.+++++||+|+++...|......    +...|++++.++.+  
T Consensus        62 ~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--  137 (433)
T PRK08134         62 SNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG--  137 (433)
T ss_pred             cChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC--
Confidence            4556789999999999965  478899999999999998999999999999999754333    34589999998753  


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                         |+++++++++ +++|+|++.+|+||+|.+.+.+++.++++. ++++|+|.++.-.... .+.    ..+-.+++.|.
T Consensus       138 ---d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~pl----~~GaD~vv~S~  208 (433)
T PRK08134        138 ---DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RPF----EHGADLVYHSA  208 (433)
T ss_pred             ---CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hcCCCEEEecc
Confidence               7999999997 689999999999999999999999999987 9999999998632221 111    33456999999


Q ss_pred             chhhcccccchheeEc
Q 019868          282 SKRAGLAGLRVGYGAF  297 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~  297 (334)
                      +|.++-+|-.+|.+++
T Consensus       209 tK~l~g~g~~~gG~v~  224 (433)
T PRK08134        209 TKFLGGHGTAIGGVLV  224 (433)
T ss_pred             ccccCCCCCceEEEEE
Confidence            9988767766666654

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.69  E-value=1.1e-15  Score=150.73  Aligned_cols=202  Identities=19%  Similarity=0.179  Sum_probs=148.1

Q ss_pred             ecCCCCCCCCCCHHHHHHHhcC---cCCCCC-CC---cChH----HHHHHHHHhcCCCCCCEEEeCCHHHHHHHH--HH-
Q 019868           99 KIDANENPYGPPPEVREALGQL---KFPYIY-PD---PESR----RLRAALAKDSGLESDHILVGCGADELIDLI--MR-  164 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-p~---~g~~----~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~--~~-  164 (334)
                      -++.|+..+..+|.+.+++.+.   ...+.| |.   .|..    ++++.+++++|++...+..++|+.+.+..+  ++ 
T Consensus        72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~  151 (481)
T PRK04366         72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRA  151 (481)
T ss_pred             eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHH
Confidence            3667778888888888887653   122445 22   2443    456666777788755666677777666543  22 


Q ss_pred             HhcCCCC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-CcHHH
Q 019868          165 CVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDED  239 (334)
Q Consensus       165 ~l~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~~~~  239 (334)
                      .+.++||    +|++++|.|+.|...++..|++++.++.+.++.+|+++++++++ +++++|++++|| |||.+ .+.++
T Consensus       152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~e  229 (481)
T PRK04366        152 YHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILE  229 (481)
T ss_pred             HhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHH
Confidence            3456776    99999999999999999999999999987778999999999997 689999999998 99976 36777


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHHHH
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~~l  305 (334)
                      +.++++. +.++++|.++.......  . .....+-++++++.+|.|+.|    |..+|++.+.+++.+.+
T Consensus       230 I~~~a~~~gal~iVD~a~~~~~~g~--~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l  297 (481)
T PRK04366        230 IAEIVHEAGGLLYYDGANLNAILGK--A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFL  297 (481)
T ss_pred             HHHHHHHcCCEEEEEecChhhhccc--C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence            7777776 89999999984221110  1 122445679999999988744    56688998888777655

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.68  E-value=1e-15  Score=146.09  Aligned_cols=172  Identities=22%  Similarity=0.238  Sum_probs=142.6

Q ss_pred             hHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCC
Q 019868          131 SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~  202 (334)
                      ..++|+.+++++|+++ ++|++++|++.+++.++..+   +++||+|++..-.|+...    ...+..|+++..++.+.+
T Consensus        45 ~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~  124 (371)
T PF00266_consen   45 LEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG  124 (371)
T ss_dssp             HHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT
T ss_pred             HHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence            4589999999999998 89999999999999999998   789999999999987544    445578999999987666


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      ..+|++++++.++ +++++|++++.+|-||...+.+++.++++. ++++++|.+++-....    -.+.+.+-++++.|.
T Consensus       125 ~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~  199 (371)
T PF00266_consen  125 GSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSS  199 (371)
T ss_dssp             SSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEES
T ss_pred             chhhhhhhhhhhc-cccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccc----ccccccccceeeecc
Confidence            7899999999997 899999999999999999999999999987 9999999998743321    112234556899999


Q ss_pred             chhhcccccchheeEcCHHHHHHHHHhc
Q 019868          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      .|.+|.+|  +|+++++++.++.+....
T Consensus       200 ~Kl~gp~G--~g~l~v~~~~~~~~~p~~  225 (371)
T PF00266_consen  200 HKLGGPPG--LGFLYVRPEAIERLRPAK  225 (371)
T ss_dssp             TSTTSSST--EEEEEEEHHHHHHHHTSS
T ss_pred             cccCCCCc--hhhheehhhhhhcccccc
Confidence            99445444  799999999999885433

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.68  E-value=8e-15  Score=140.08  Aligned_cols=223  Identities=12%  Similarity=0.042  Sum_probs=143.7

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhc-C-cC--------CCCCC------Cc-ChHHHHHHHHHhcCCCCCCEEEeCCH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQ-L-KF--------PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGA  155 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~--------~~~Yp------~~-g~~~lr~~lA~~~~~~~~~I~~t~G~  155 (334)
                      ..++++|+.|+. ++...+.+.++..+ + .+        .+...      .. -..++|+.+|++++.+ +.+++++|.
T Consensus         3 ~~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~   81 (370)
T PRK05937          3 ESLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGY   81 (370)
T ss_pred             CCceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChH
Confidence            356789988754 66666666654432 1 11        11111      11 2578999999999974 347777877


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCc
Q 019868          156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNP  230 (334)
Q Consensus       156 ~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NP  230 (334)
                      ...+ .+...+.++||.|++..-.|......++......+.++     ..|++++++.++.     +++.+|++++++|+
T Consensus        82 ~a~~-~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~  155 (370)
T PRK05937         82 MANL-GLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSF  155 (370)
T ss_pred             HHHH-HHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCC
Confidence            6544 45555567888888877788776666665444444443     3578988888762     23557778899999


Q ss_pred             cccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      +|.+.+.+++.++++. ++++++||+|..........   ......+..+++.||||.+|..|   +.++..+++.+.+.
T Consensus       156 ~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~  232 (370)
T PRK05937        156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLM  232 (370)
T ss_pred             CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHH
Confidence            9999999999999987 99999999998643221111   11111122367899999998777   33555666666555


Q ss_pred             HhcCC----CCCcHHHHHHHHHHh
Q 019868          307 RAKQP----YNVSVAAEVAACAAL  326 (334)
Q Consensus       307 ~~~~~----~~~~~~~q~aa~~~L  326 (334)
                      ....+    .+.+++...++.+++
T Consensus       233 ~~~~~~~~s~~~~~~~~~a~~aal  256 (370)
T PRK05937        233 LNSPPLRYSTGLPPHLLISIQVAY  256 (370)
T ss_pred             HhCCCCeecCCCCHHHHHHHHHHH
Confidence            33333    235566555444444

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.68  E-value=3e-15  Score=144.32  Aligned_cols=232  Identities=13%  Similarity=0.090  Sum_probs=151.6

Q ss_pred             CCCCCeeecCCCCCCCC---CCHHHHHHHhcC-c-CCC--C-CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPY--I-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~--~-Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..|.....   .+|++.+++.+. . ..+  . +.......+++.++++.+.  +.++++++++++...++
T Consensus        28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al  105 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL  105 (400)
T ss_pred             CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence            35677899977644333   468888887752 2 111  1 1223456788888888764  57889999999999999


Q ss_pred             HHhc----------CCCCEEEEcCCCChhHHHHH-HHCCCeEEE---eeCCCC----CCCCHHHHHHhcccCCceEEEEe
Q 019868          164 RCVL----------DPGDKIVDCPPTFTMYEFDA-AVNGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       164 ~~l~----------~~gd~Vl~~~p~y~~~~~~~-~~~G~~v~~---v~~~~~----~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +...          ..+++|+..+-.|....... ...+.....   .+...+    ...|++++++.++.+++++|++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e  185 (400)
T PTZ00125        106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE  185 (400)
T ss_pred             HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence            8653          13477888877776443322 222211100   000000    11389999999864578999998


Q ss_pred             CCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       226 ~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      .++||||.+++    .+++.++++. ++++|+||+|.++...+..... .......++  ++||.++.+++|+||+++++
T Consensus       186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~--~~sK~l~~g~~~ig~v~~~~  263 (400)
T PTZ00125        186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV--LLGKALSGGLYPISAVLAND  263 (400)
T ss_pred             CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE--EEcccccCCCcCcEEEEEcH
Confidence            89999999997    5666666665 9999999999877543322111 111111233  47899985446999999999


Q ss_pred             HHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       300 ~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      ++++.+.....  .++.+++.+.++.++|+
T Consensus       264 ~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~  293 (400)
T PTZ00125        264 DVMLVIKPGEHGSTYGGNPLACAVAVEALE  293 (400)
T ss_pred             HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99988764332  36778899988877664

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.67  E-value=6.3e-15  Score=143.12  Aligned_cols=158  Identities=16%  Similarity=0.163  Sum_probs=125.0

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~  203 (334)
                      ++....|++.+|++.|.+  ..+++++++.++..++.+++++||+|+++...|.....    .+...|++++.++ +.  
T Consensus        68 ~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~--  142 (436)
T PRK07812         68 NPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP--  142 (436)
T ss_pred             CchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence            455789999999999964  46777777889999999999999999999988875443    2344788888885 21  


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                       .|+++++++++ +++++|++.+|+||+|.+.+.+++.++++. ++++|+|+++..... ..+.    ..+-.+++.|++
T Consensus       143 -~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~pl----~~GaDivv~S~t  215 (436)
T PRK07812        143 -DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPL----EHGADIVVHSAT  215 (436)
T ss_pred             -CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCch----hcCCCEEEEecc
Confidence             28999999997 689999999999999999999999999988 999999998863221 1111    234458889999


Q ss_pred             hhhcccccchheeEc
Q 019868          283 KRAGLAGLRVGYGAF  297 (334)
Q Consensus       283 K~~gl~G~R~G~l~~  297 (334)
                      |.+|-.|--+|++++
T Consensus       216 K~lgg~G~~i~G~vv  230 (436)
T PRK07812        216 KYLGGHGTAIAGVIV  230 (436)
T ss_pred             cccCCCCCeEEEEEE
Confidence            998767666777666

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=3.2e-15  Score=140.69  Aligned_cols=169  Identities=19%  Similarity=0.218  Sum_probs=139.6

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL  205 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~  205 (334)
                      .+-..+|.+++|+++|+.  +.+.++++|.++.++++++ ++|||+|+++.-+|......+...|++++.++.+ +.+.+
T Consensus        33 G~~v~~FE~~~ae~~G~k--~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~ni  110 (374)
T COG0399          33 GPFVRRFEQAFAEYLGVK--YAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNI  110 (374)
T ss_pred             ChHHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCC
Confidence            334789999999999964  7888888999999999966 5999999999999999999999999999999965 56999


Q ss_pred             CHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--
Q 019868          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--  281 (334)
Q Consensus       206 d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~--  281 (334)
                      |++.++++++ +++|+|+   |-+--|...+.+.|.+|++. +++||+|.+++..+ +.+.....++    .+.+.||  
T Consensus       111 d~~~ie~aIt-~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G----d~~~fSF~~  182 (374)
T COG0399         111 DPDLIEAAIT-PRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG----DIGAFSFHA  182 (374)
T ss_pred             CHHHHHHHcc-cCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc----ceEEEEecC
Confidence            9999999998 6799999   66678999999999999998 99999999998765 3444433333    2667777  


Q ss_pred             chhhcccccchheeEc-CHHHHHHHHHh
Q 019868          282 SKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~-~~~~i~~l~~~  308 (334)
                      .|.++ +| -.|.++. ++++++.++..
T Consensus       183 ~K~it-tg-EGGav~tnd~ela~k~~~l  208 (374)
T COG0399         183 TKNLT-TG-EGGAVVTNDEELAEKARSL  208 (374)
T ss_pred             CCCcc-cc-CceEEEeCCHHHHHHHHHH
Confidence            89887 44 4577777 56777776644

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.66  E-value=5.8e-15  Score=141.25  Aligned_cols=188  Identities=12%  Similarity=0.043  Sum_probs=144.1

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~  202 (334)
                      .+|....|.+.||++-|.  +..+++++++.++..++.+++++||+|+++...|......+    +..|+++..++.   
T Consensus        60 ~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~---  134 (395)
T PRK08114         60 GTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP---  134 (395)
T ss_pred             CChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC---
Confidence            456678899999998873  47888888999999999999999999999999997655443    558999998873   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                        .|.+.++++++ +++|+|++.+|.||+|.+.|.+++.++++.   ++++++|.++.-...     ..+.+.+-.++++
T Consensus       135 --~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~GaDivv~  206 (395)
T PRK08114        135 --LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDFGIDISIQ  206 (395)
T ss_pred             --CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHcCCcEEEE
Confidence              36789999997 689999999999999999999999999987   499999999964221     1112345569999


Q ss_pred             CCchhhcccc-cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      |.+|.++-+| ...|.++.+++.++.+......  ..+++...+.+...|+
T Consensus       207 S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~  257 (395)
T PRK08114        207 AGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLR  257 (395)
T ss_pred             cCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence            9999765443 6778777788776666543332  3456666555544444

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.64  E-value=7.6e-15  Score=141.94  Aligned_cols=229  Identities=16%  Similarity=0.192  Sum_probs=153.6

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.++|+..+  .+.++ ..|++.+++.+ +..    ...|..+...+|.+.|++..+  .+.+++++++++++..+
T Consensus        35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A  112 (406)
T PRK12381         35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA  112 (406)
T ss_pred             eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence            3457788998664  23333 36888888765 322    122333345678888888775  46999999999999999


Q ss_pred             HHHhc--------CCCCEEEEcCCCChhHHHHHHHCCCeEEE------eeC--CCCCCCCHHHHHHhcccCCceEEEEeC
Q 019868          163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVVK------VPR--KSDFSLNVELIADAVEREKPKCIFLTS  226 (334)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~------v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~  226 (334)
                      ++...        ....+|+..+..|......+...+.....      ++.  ......|++.+++.++ +++++|++ .
T Consensus       113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E  190 (406)
T PRK12381        113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E  190 (406)
T ss_pred             HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence            98542        13478888899887665433332221100      000  0001237899999886 57777777 6


Q ss_pred             CCCccccCC--cHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868          227 PNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       227 p~NPtG~~~--~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      |.|++|-++  +.+.+++|.+.    ++++|+||+|.++...+....  ..+. ...  +.||||.+| +|+|+||++++
T Consensus       191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pD--i~t~sK~l~-gG~~ig~~~~~  266 (406)
T PRK12381        191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPD--VLTTAKALG-GGFPIGAMLTT  266 (406)
T ss_pred             CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCC--EEEehhhhh-CCCceEEEEEc
Confidence            999998765  67777776654    999999999988754433221  1111 111  358999998 89999999999


Q ss_pred             HHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       299 ~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      +++++.+.....  .++.+++.++++.++|+
T Consensus       267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~  297 (406)
T PRK12381        267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLE  297 (406)
T ss_pred             HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999998865333  36779999999888553

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.63  E-value=8.1e-15  Score=137.12  Aligned_cols=195  Identities=18%  Similarity=0.155  Sum_probs=150.3

Q ss_pred             eecCCCCCCCCCCHHHHHHHhcC-cC--C-----CCCCC---cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVREALGQL-KF--P-----YIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~--~-----~~Yp~---~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      |.|+.+.. .++.|++.+++... ..  +     +.|+.   ...++.|+.+|+.+|+++++|++|+|+||+.++++...
T Consensus         3 iYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~   81 (386)
T COG1104           3 IYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA   81 (386)
T ss_pred             cccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhh
Confidence            44544332 34568888877542 11  1     22321   12468999999999999999999999999999999873


Q ss_pred             --c----CCCCEEEEcCCCChhHHHHHHHC---CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          167 --L----DPGDKIVDCPPTFTMYEFDAAVN---GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       167 --~----~~gd~Vl~~~p~y~~~~~~~~~~---G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                        .    +.|..|+++.-.|+...+.++..   |.+|.++|.+.++.+|+++|+++++ +++.+|.+...||.||.+.|.
T Consensus        82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQpI  160 (386)
T COG1104          82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQPI  160 (386)
T ss_pred             HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeecccH
Confidence              2    25789999999999877766654   9999999988889999999999998 689999999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +++.++++. ++++.+|.++.-.    ...-.+....-++...|-.|.+|.-|  +|.+++.+.
T Consensus       161 ~ei~~i~k~~~i~fHvDAvQa~G----kipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~  218 (386)
T COG1104         161 AEIGEICKERGILFHVDAVQAVG----KIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPG  218 (386)
T ss_pred             HHHHHHHHHcCCeEEEehhhhcC----ceeccccccCcceEEeehhhccCCCc--eEEEEECCC
Confidence            999999997 9999999998632    11111222234578889999888777  788887543

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.62  E-value=3.1e-14  Score=137.24  Aligned_cols=227  Identities=17%  Similarity=0.184  Sum_probs=149.8

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++++++|+..|  ...++ ..|++.+++.+ +..    ...|+.....+|.+.|+++.+.  +.++++++++++...+
T Consensus        31 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A  108 (397)
T TIGR03246        31 DQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAA  108 (397)
T ss_pred             eCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHH
Confidence            3467789999775  33343 46888888765 322    1233434456888888888763  5899999999999999


Q ss_pred             HHHhc--------CCCCEEEEcCCCChhHH-HHHHHCCC------------eEEEeeCCCCCCCCHHHHHHhcccCCceE
Q 019868          163 MRCVL--------DPGDKIVDCPPTFTMYE-FDAAVNGA------------AVVKVPRKSDFSLNVELIADAVEREKPKC  221 (334)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~-~~~~~~G~------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~  221 (334)
                      ++...        ...++|+..+-.|.... ......|.            .+..++.     .|++.+++.+. +++++
T Consensus       109 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aa  182 (397)
T TIGR03246       109 LKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS-DKTCA  182 (397)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhc-cCeEE
Confidence            98541        12356777776665443 22232222            1122221     27899999986 57888


Q ss_pred             EEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868          222 IFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       222 i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      |+++.++++.|... +.+.+++|.+   . ++++|+||+|.++...+..... ...+-..-+-++||.+| .|+|+||++
T Consensus       183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~-~~~gv~pDi~t~~K~lg-gG~pigav~  260 (397)
T TIGR03246       183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAY-MHYGVTPDILTSAKALG-GGFPIGAML  260 (397)
T ss_pred             EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhh-hhcCCCCCEEEeehhhh-CCcceeEEE
Confidence            88886666666554 6666666654   3 9999999999877543322111 11111112337999998 899999999


Q ss_pred             cCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          297 FPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       297 ~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++.+.....  .++.++++++++.++|+
T Consensus       261 ~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~  293 (397)
T TIGR03246       261 TTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLD  293 (397)
T ss_pred             EcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999888764322  36678899998888885

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.61  E-value=1.8e-14  Score=137.60  Aligned_cols=189  Identities=21%  Similarity=0.213  Sum_probs=137.0

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~  202 (334)
                      .++....|++.||++.+.  +.++++++++.++..++.+++++||.|+++...|......++    ..|.++..++.   
T Consensus        53 gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~---  127 (386)
T PF01053_consen   53 GNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP---  127 (386)
T ss_dssp             C-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST---
T ss_pred             ccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc---
Confidence            455577899999999885  578999999999999999999999999999999986655444    47999988863   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C-CeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~-~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                        -|+++++++++ +++++|++.+|.||+..+.+.+.+.++++. + +++|+|+.+.....- .++    ..+.++++.|
T Consensus       128 --~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv~S  199 (386)
T PF01053_consen  128 --TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVVHS  199 (386)
T ss_dssp             --TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEEEE
T ss_pred             --hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEEee
Confidence              37899999998 699999999999999999999999999987 7 999999999643221 122    2234599999


Q ss_pred             Cchhhcccc-cchheeEcC--HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          281 FSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       281 ~SK~~gl~G-~R~G~l~~~--~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .+|.++-.| .=.|.++++  +++.+.++.....  ..+++...+.....|+.
T Consensus       200 ~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T  252 (386)
T PF01053_consen  200 ATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT  252 (386)
T ss_dssp             TTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT
T ss_pred             ccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc
Confidence            999875233 335777764  4777766655443  34566655555555543

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.60  E-value=8.7e-14  Score=134.66  Aligned_cols=193  Identities=16%  Similarity=0.043  Sum_probs=142.6

Q ss_pred             HHHHHHHHHhcCCCC-CCEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCC
Q 019868          132 RRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDF  203 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~-~~I~~t~G~~-~~i~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~  203 (334)
                      .+|.+.+++++|++. +..++++|++ .++.+++.++-.   +||+|+++.-+|......+...|++++.++.   +++|
T Consensus       108 ~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~  187 (444)
T TIGR03531       108 NKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDEL  187 (444)
T ss_pred             HHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCC
Confidence            478888888899853 4588888888 577777765542   5899999999999999999999999999983   5679


Q ss_pred             CCCHHHHHHhcccC--CceEEEEeCCC-CccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhh---cCCC-cE
Q 019868          204 SLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV---KKHD-NL  275 (334)
Q Consensus       204 ~~d~~~l~~~l~~~--~~~~i~l~~p~-NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~---~~~~-~~  275 (334)
                      .+|++++++++++.  +..++++++|+ +++|..-+.+++.++++. ++++|+|++|+....  ......   ...+ -.
T Consensus       188 ~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--~~~~~~~~g~~~Grad  265 (444)
T TIGR03531       188 TTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--KYMELINKAIKVGRVD  265 (444)
T ss_pred             CcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--hhhhhhhccccccCCC
Confidence            99999999999731  55677777775 566678889999999887 999999999985331  111111   0111 25


Q ss_pred             EEEcCCchhhcccccchheeE-c-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868          276 IVLRTFSKRAGLAGLRVGYGA-F-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       276 i~i~S~SK~~gl~G~R~G~l~-~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +++.|++|.+.++|+  |+++ + ++++++.+.+.......+.+.|.+...++.-
T Consensus       266 ~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~  318 (444)
T TIGR03531       266 AVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSL  318 (444)
T ss_pred             eEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Confidence            778899999988877  5544 6 7788888876543333455677776666653

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR01814 kynureninase kynureninase

Probab=99.60  E-value=4.4e-14  Score=136.62  Aligned_cols=197  Identities=17%  Similarity=0.118  Sum_probs=137.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-c---CC--CC-CC--C--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-K---FP--YI-YP--D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~---~~--~~-Yp--~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++.|+.+... +.|+.+.+++.+. .   ..  .. +.  .  ....+.++++ +++|+++++|++++|++++++.++
T Consensus        26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~  103 (406)
T TIGR01814        26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL  103 (406)
T ss_pred             CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence            457899866644 3467777776541 1   10  11 11  1  1122333445 789999999999999999999999


Q ss_pred             HHhcCCC---CEEEEcCCCChh--H--HHHHHHCCCeE----EEeeCCCCCCCCHHHHHHhcc--cCCceEEEEeCCCCc
Q 019868          164 RCVLDPG---DKIVDCPPTFTM--Y--EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP  230 (334)
Q Consensus       164 ~~l~~~g---d~Vl~~~p~y~~--~--~~~~~~~G~~v----~~v~~~~~~~~d~~~l~~~l~--~~~~~~i~l~~p~NP  230 (334)
                      ..+++++   +.|++....|+.  +  ...++..|+++    +.++.++++.+|++.+++.++  .+++++|++++++|.
T Consensus       104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~  183 (406)
T TIGR01814       104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY  183 (406)
T ss_pred             HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence            9887664   368888889986  2  23445678887    456655556789999988774  257899999999999


Q ss_pred             cccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHH
Q 019868          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLS  300 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~  300 (334)
                      ||...+.+++.++++. ++++++|++++.....    -.+...+-.+++.|..|.+ |-+|   |.+++.++
T Consensus       184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~----id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~  248 (406)
T TIGR01814       184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP----LDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEK  248 (406)
T ss_pred             cceecCHHHHHHHHHHcCCEEEEEcccccCCcc----cccccCCCCEEEEcCccccCCCCC---eEEEEehh
Confidence            9999999999999997 9999999998753221    1122345569999999965 3334   44554333

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.60  E-value=2.6e-14  Score=139.00  Aligned_cols=235  Identities=12%  Similarity=0.073  Sum_probs=146.7

Q ss_pred             CCCCCCeeecCCCCCC--CC-CCHHHHHHHhc-CcC-CCCC-C---CcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF-PYIY-P---DPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~-~~~Y-p---~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~  160 (334)
                      ..+++.++|+..|...  ++ .+|++.+++.+ +.. .+.+ +   .+...++-+.+++..+.+. +.+++++++++++.
T Consensus        37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e  116 (425)
T PRK08088         37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE  116 (425)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            3467778999776433  33 36788877765 221 1111 2   2233455556666555432 46666666667666


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEE----------------EeeCCCCCCCC----HHHHHHhcc---
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVV----------------KVPRKSDFSLN----VELIADAVE---  215 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~----------------~v~~~~~~~~d----~~~l~~~l~---  215 (334)
                      ..++...  ....+|+...++|......+...+....                .+|.+.+ ..+    ++.+++.++   
T Consensus       117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~  195 (425)
T PRK08088        117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA  195 (425)
T ss_pred             HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence            6665332  2235566668988766544444332211                1221111 122    456777764   


Q ss_pred             -cCCceEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc
Q 019868          216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (334)
Q Consensus       216 -~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G  289 (334)
                       .++..+|++. ..+|+.+...+.+.+++|.++    ++++|+||+|.++...+... .....+.+..+.||||.++ +|
T Consensus       196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G  273 (425)
T PRK08088        196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG  273 (425)
T ss_pred             CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence             2456677766 446776667777777777664    99999999999876543322 1122233455789999998 99


Q ss_pred             cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          290 LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       290 ~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||+++++++++.+......  ++.+++.|+++.++|+.
T Consensus       274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~  314 (425)
T PRK08088        274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKV  314 (425)
T ss_pred             CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            9999999999999988654433  67899999999999975

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.57  E-value=1e-13  Score=130.15  Aligned_cols=189  Identities=20%  Similarity=0.185  Sum_probs=148.3

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS  201 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~  201 (334)
                      ++.+....+.+.+++..|..  +.++.++++.++..++..|+..|+.|++.+..|......++    ..|++...++.+ 
T Consensus        74 ~~nPt~~~le~~iaal~ga~--~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-  150 (409)
T KOG0053|consen   74 SGNPTRDVLESGIAALEGAA--HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-  150 (409)
T ss_pred             CCCCchHHHHHHHHHHhCCc--eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-
Confidence            35566778999999999854  58888888889999999999999999999999986555443    478888887643 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                          |+++++++++ +++++|++.+|.||++.+.+.+++.++++. ++++|+|+.+.....- .++    ..+.+|+++|
T Consensus       151 ----~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~hS  220 (409)
T KOG0053|consen  151 ----DLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVHS  220 (409)
T ss_pred             ----hHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEEe
Confidence                6789999997 589999999999999999999999999998 9999999999865321 122    2345699999


Q ss_pred             Cchhhc-ccccchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          281 FSKRAG-LAGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       281 ~SK~~g-l~G~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      .+|.+| -...=.|.++.+ +++.+.+...+..  ++.+++.......-|+
T Consensus       221 aTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk  271 (409)
T KOG0053|consen  221 ATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK  271 (409)
T ss_pred             eeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence            999885 334556777775 8888888776654  6677776655544443

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.57  E-value=5.9e-14  Score=136.36  Aligned_cols=158  Identities=16%  Similarity=0.183  Sum_probs=122.7

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~~  203 (334)
                      .+....|++.+|++.|. .+.|++++|+ .++..++..++++||+|+++...|....    ..+...|++++.++. .  
T Consensus        68 ~pt~~~le~~la~l~g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~--  142 (437)
T PRK05613         68 NPTVEALENRIASLEGG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P--  142 (437)
T ss_pred             ChHHHHHHHHHHHHhCC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C--
Confidence            44578899999999986 3456666666 7777888888899999999999998653    344668999999872 2  


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                       .|++.++++++ +++++|++.++.||+|.+.+.+++.++++. ++++|+|.++..... ....    ..+-.+++.|++
T Consensus       143 -~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~----~~GaDivv~S~~  215 (437)
T PRK05613        143 -DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPL----ELGADVVVASLT  215 (437)
T ss_pred             -CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChH----HhCCCEEEeecc
Confidence             27899999997 679999999999999999999999999987 999999999864322 1111    223469999999


Q ss_pred             hhhcccccchheeEc
Q 019868          283 KRAGLAGLRVGYGAF  297 (334)
Q Consensus       283 K~~gl~G~R~G~l~~  297 (334)
                      |.++-.|--+|-+++
T Consensus       216 K~l~G~gd~~gG~vv  230 (437)
T PRK05613        216 KFYTGNGSGLGGVLI  230 (437)
T ss_pred             ceecCCCcceeEEEE
Confidence            987755555555444

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.56  E-value=8.6e-14  Score=132.63  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=136.4

Q ss_pred             cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCC
Q 019868          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN  206 (334)
Q Consensus       129 ~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d  206 (334)
                      +...+|++++++++|.  ++++.+++++.++.+++.++ +++||+|+++.-+|......+...|++++.++.+ +++.+|
T Consensus        25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id  102 (363)
T PF01041_consen   25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID  102 (363)
T ss_dssp             HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred             HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence            3478999999999994  58999999999999999987 4799999999999999999999999999999965 789999


Q ss_pred             HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCC--c
Q 019868          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--S  282 (334)
Q Consensus       207 ~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~--S  282 (334)
                      ++.++++++ +++|+|++.   +.-|...+.+++.++++. |++||+|.+++..+. .+......+    .+.+.||  +
T Consensus       103 ~~~~~~~i~-~~t~ai~~~---h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~  174 (363)
T PF01041_consen  103 PEALEKAIT-PKTKAILVV---HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT  174 (363)
T ss_dssp             HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred             HHHHHHHhc-cCccEEEEe---cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence            999999998 788999955   567888899999999987 999999999987652 232222222    3677777  6


Q ss_pred             hhhcccccchheeEc-CHHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHhcC
Q 019868          283 KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQN  328 (334)
Q Consensus       283 K~~gl~G~R~G~l~~-~~~~i~~l~~~~~~-------------------~~~~~~~q~aa~~~L~~  328 (334)
                      |.+. +| ..|.+++ ++++.++++.++..                   +.++.+..+.+..-|+.
T Consensus       175 K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~  238 (363)
T PF01041_consen  175 KIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKR  238 (363)
T ss_dssp             SSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHT
T ss_pred             CCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHH
Confidence            8764 33 3488887 46777777765431                   23556666666666654

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PLN02624 ornithine-delta-aminotransferase

Probab=99.56  E-value=2.6e-13  Score=133.55  Aligned_cols=227  Identities=14%  Similarity=0.151  Sum_probs=151.3

Q ss_pred             CCCCCCeeecCCCCCCCC---CCHHHHHHHhc-CcC---C-CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENPYG---PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~---~-~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++..++|+..|.-...   ..|++.+++++ +..   . ..|..+...+|.+.++++++.  +.++++++++++...+
T Consensus        71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A  148 (474)
T PLN02624         71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA  148 (474)
T ss_pred             ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence            446778899977643332   36888888775 221   1 223444567899999998863  5899999999999999


Q ss_pred             HHHhcC---------CCC-EEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCCCHHHHHHhccc--C
Q 019868          163 MRCVLD---------PGD-KIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E  217 (334)
Q Consensus       163 ~~~l~~---------~gd-~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~d~~~l~~~l~~--~  217 (334)
                      ++....         +++ +|+...-+|......+......             +..++.     -|++.+++.++.  .
T Consensus       149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~  223 (474)
T PLN02624        149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD  223 (474)
T ss_pred             HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence            873321         133 5666666665443222221111             122221     267888888853  4


Q ss_pred             CceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhccccc
Q 019868          218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                      ++.+|++..++|++|.+++    .+++.++++. ++++|+||+|.+|...+.....  .+.... ++  +|||.+|.+++
T Consensus       224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD-iv--~lsK~lggG~~  300 (474)
T PLN02624        224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD-VV--ILGKALGGGVI  300 (474)
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC-EE--EecccccCCCC
Confidence            5788999999999999998    5566666665 9999999999877544332221  111122 22  36899997779


Q ss_pred             chheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          291 RVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       291 R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      ++|++++++++++.+.+...  .++.+++.+.++.++|+
T Consensus       301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe  339 (474)
T PLN02624        301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQ  339 (474)
T ss_pred             cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999999988887654332  35788999999988875

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.56  E-value=2e-13  Score=132.86  Aligned_cols=231  Identities=17%  Similarity=0.125  Sum_probs=152.5

Q ss_pred             CCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++..++|+..|..  .++ .+|.+.+++.+ ++..  ..++.....+|.+.|++.+. ..+.+++++++++++..+++.
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~  125 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL  125 (426)
T ss_pred             CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence            45778999987753  233 56888888765 3222  22355567789999988764 356899999999999999996


Q ss_pred             hcC--CCCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCC--CCCCCCHHHHHHhccc--CCceEEEEeC
Q 019868          166 VLD--PGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS  226 (334)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~--~~~~~d~~~l~~~l~~--~~~~~i~l~~  226 (334)
                      ...  .+++|+..++.|..+...+... |            .....++..  .-..-|++.+++.+..  .++.+|++..
T Consensus       126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp  205 (426)
T PRK00062        126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP  205 (426)
T ss_pred             HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence            432  3578999999998775333221 1            000000000  0001278888887752  3567788774


Q ss_pred             CCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       227 p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ....+|.+.+    .+++.++++. ++++|+||+|.++..+... ....+..+ .  +.+|||.++ .|+++|+++++++
T Consensus       206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~p-D--i~~~gK~l~-~G~p~ga~~~~~~  281 (426)
T PRK00062        206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTP-D--LTTLGKIIG-GGLPVGAFGGRRE  281 (426)
T ss_pred             CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCc-c--hHhhhhHhh-CCCcceeeeEHHH
Confidence            4444898887    4555666665 9999999999877432211 11111111 1  468999998 8999999999999


Q ss_pred             HHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868          301 IIEYLWRAK-----QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       301 ~i~~l~~~~-----~~~~~~~~~q~aa~~~L~  327 (334)
                      +++.+....     ..++.+++.++++.++|+
T Consensus       282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~  313 (426)
T PRK00062        282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK  313 (426)
T ss_pred             HHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence            999885321     225788999999888775

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.56  E-value=1.7e-13  Score=132.38  Aligned_cols=228  Identities=14%  Similarity=0.108  Sum_probs=151.3

Q ss_pred             CCCCCeeecCCCCCCCC---CCHHHHHHHhc-Cc-CCCC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~-~~~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++.+++|+..+.....   ..|++.+++.+ +. ....   +..+...+|.+.++++++.  +.++++++++++...++
T Consensus        34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai  111 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI  111 (401)
T ss_pred             CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence            35677899987644333   36888888765 22 1111   2233467899999999874  58999999999999999


Q ss_pred             HHhc---------CC-CCEEEEcCCCChhH-HHHHHHCC------------CeEEEeeCCCCCCCCHHHHHHhccc--CC
Q 019868          164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNG------------AAVVKVPRKSDFSLNVELIADAVER--EK  218 (334)
Q Consensus       164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~--~~  218 (334)
                      +...         .+ .++|+...-.|... .......|            ..+..++.     .|++++++.+++  .+
T Consensus       112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~  186 (401)
T TIGR01885       112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLEALEEALEDHGPN  186 (401)
T ss_pred             HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHHHHHHHHHhcCCC
Confidence            8642         13 35677777776542 22222222            11233332     268888887752  35


Q ss_pred             ceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccch
Q 019868          219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRV  292 (334)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~  292 (334)
                      ..+|++..+++++|...+    .+++.++++. ++++|+||+|..+...+..... .......++  ++||.++..|+|+
T Consensus       187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~g~~~i  264 (401)
T TIGR01885       187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSGGVYPV  264 (401)
T ss_pred             EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccCCCCCc
Confidence            668888888999999997    5666667765 9999999999877543322111 111112233  4789998666999


Q ss_pred             heeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       293 G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      |++++++++++.+.....  .++.+++++.++.++|+.
T Consensus       265 g~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~  302 (401)
T TIGR01885       265 SAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEV  302 (401)
T ss_pred             EEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999988765222  356788999888888763

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.55  E-value=3.5e-13  Score=127.73  Aligned_cols=189  Identities=19%  Similarity=0.181  Sum_probs=139.5

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~  202 (334)
                      .++....|.++++++-|  .++.+.+++++.+|..++..++++||.|++++..|+....    ..+..|.++..++..  
T Consensus        61 ~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~--  136 (396)
T COG0626          61 GNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG--  136 (396)
T ss_pred             CCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC--
Confidence            45667889999999886  4578888999999999999999999999999998975443    344589999888642  


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                         +.+++++++.++++|+|++.+|.|||..+.|...+.++++. ++++|+|+.|....... ++    ..+.+|+++|.
T Consensus       137 ---~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvhSa  208 (396)
T COG0626         137 ---DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVHSA  208 (396)
T ss_pred             ---ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEEec
Confidence               44666766654589999999999999999999999999998 89999999997533321 11    33456999999


Q ss_pred             chhhccc-ccchheeEcCH-HHHHHHHHhcC---CCCCcHHHHHHHHHHhc
Q 019868          282 SKRAGLA-GLRVGYGAFPL-SIIEYLWRAKQ---PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       282 SK~~gl~-G~R~G~l~~~~-~~i~~l~~~~~---~~~~~~~~q~aa~~~L~  327 (334)
                      +|.++-. ..=.|.++++. ++.+.+.....   ...+++...+.....|+
T Consensus       209 TKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk  259 (396)
T COG0626         209 TKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR  259 (396)
T ss_pred             cccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc
Confidence            9987533 34456566554 55555522222   13456665555554444

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.54  E-value=5.2e-13  Score=130.35  Aligned_cols=234  Identities=18%  Similarity=0.218  Sum_probs=147.3

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCC-----CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..|  ...++ .+|++.+++.+ +.....+     ..+...+|-+.|++..+..-+.+++++++++++..
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~  116 (443)
T PRK08360         37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG  116 (443)
T ss_pred             ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence            4467889999776  44454 46888888765 3321111     22234566677777665434689999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCChhHHH-HHHHCCC------------eEEEeeCCCC----CC--------CCHHHHHHhc
Q 019868          162 IMRCVL--DPGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSD----FS--------LNVELIADAV  214 (334)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~G~------------~v~~v~~~~~----~~--------~d~~~l~~~l  214 (334)
                      +++.-.  ....+|+...-.|..... .....|.            .+..++..+.    +.        -+++.+++.+
T Consensus       117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (443)
T PRK08360        117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF  196 (443)
T ss_pred             HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence            988432  233567777766654322 1221221            1222331111    10        1234455555


Q ss_pred             c----cCCceEEEEeCCCCccccCCc-HHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCch
Q 019868          215 E----REKPKCIFLTSPNNPDGSIIN-DEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSK  283 (334)
Q Consensus       215 ~----~~~~~~i~l~~p~NPtG~~~~-~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK  283 (334)
                      +    .+++.+|++.-.+||+|.+++ .+.++++   ++. ++++|+||+|.+|...+....  ..+..+.++   ++||
T Consensus       197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK  273 (443)
T PRK08360        197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK  273 (443)
T ss_pred             HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence            3    246788888755699999887 4445555   444 999999999998865433211  122223333   6799


Q ss_pred             hhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          284 RAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       284 ~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      .++ +|+|+||+++++++++.+.....  .++.++++++++.++|+.
T Consensus       274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~  319 (443)
T PRK08360        274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEE  319 (443)
T ss_pred             ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            999 89999999999999988864432  366788999998888864

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.54  E-value=5.1e-13  Score=129.10  Aligned_cols=234  Identities=15%  Similarity=0.171  Sum_probs=150.9

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCC----CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYI----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~----Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.++|+..+  ...++ ..|++.+++.+ +.....    +......+|-+.|.+..+. .+.++++++++++...+
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A  114 (408)
T PRK04612         36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA  114 (408)
T ss_pred             ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence            3467889999766  33344 46888888765 322111    2222234566666665542 26899999999999999


Q ss_pred             HHHhcC----C----C-CEEEEcCCCChhHHHHHHH-CCCeEEE---eeCCCC----CCCCHHHHHHhcccCCceEEEEe
Q 019868          163 MRCVLD----P----G-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       163 ~~~l~~----~----g-d~Vl~~~p~y~~~~~~~~~-~G~~v~~---v~~~~~----~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      ++....    .    + .+|+....+|......+.. .|.....   -+...+    .-.|++.+++.+. .+..+.++.
T Consensus       115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aavi~  193 (408)
T PRK04612        115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGDVAAVML  193 (408)
T ss_pred             HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC-CCCEEEEEE
Confidence            884321    1    2 4688888888654433322 2211100   000011    0127889998886 345566667


Q ss_pred             CCCCccccCCc--HHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          226 SPNNPDGSIIN--DEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       226 ~p~NPtG~~~~--~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      .|.+++|.+++  .+.+.+|.+   . ++++|+||+|.+|...+..... ...+....+.+|||.++ +|+|+||+++++
T Consensus       194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~  271 (408)
T PRK04612        194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP  271 (408)
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence            78888887765  445555554   4 9999999999987654432222 13345677889999998 899999999999


Q ss_pred             HHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       300 ~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++.+.....  .|+.+++++.++.++|+.
T Consensus       272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~  302 (408)
T PRK04612        272 KVAETMQFGAHGTTFGGNPLAAAVARVALRK  302 (408)
T ss_pred             HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHH
Confidence            98887764332  367889999999988863

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.53  E-value=5e-13  Score=122.88  Aligned_cols=180  Identities=22%  Similarity=0.286  Sum_probs=124.4

Q ss_pred             CCCCCCcChHHHHHHHHHhcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEE-cCCCChhHHHHHH----------
Q 019868          123 PYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVD-CPPTFTMYEFDAA----------  188 (334)
Q Consensus       123 ~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~---t~G~~~~i~~~~~~l~~~gd~Vl~-~~p~y~~~~~~~~----------  188 (334)
                      +++|.|.|.+.|.+..|+.++.+.  -++   -.++|++|...+..+++|||+.+. ...-|.......-          
T Consensus        48 GYGY~D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~  125 (403)
T PF06838_consen   48 GYGYDDIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK  125 (403)
T ss_dssp             TT-TT-HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG
T ss_pred             cCCCCCccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH
Confidence            366678888999999999999642  233   246779999999999999999984 5556776666552          


Q ss_pred             HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC------CCeEEEccCCcCccC
Q 019868          189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSG  261 (334)
Q Consensus       189 ~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~  261 (334)
                      -+|.+...++..+++.+|.+.++++++ +++|+|+|. +-..-+=..++.++++++++.      ++++++|++|.+|..
T Consensus       126 e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE  204 (403)
T PF06838_consen  126 EFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE  204 (403)
T ss_dssp             GGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS
T ss_pred             HhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc
Confidence            267889999988888999999999998 789999998 555666667889999998874      899999999999997


Q ss_pred             CCCchhhhcCCCcEEEEcCCchhhcccccc--hheeEcCHHHHHHHHHhcC
Q 019868          262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       262 ~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R--~G~l~~~~~~i~~l~~~~~  310 (334)
                      ...+...    +.+++.+|+-|+-| .|+-  .||+++.+++++.......
T Consensus       205 ~~EP~~v----GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLT  250 (403)
T PF06838_consen  205 TQEPTEV----GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLT  250 (403)
T ss_dssp             SS-GGGG----T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS
T ss_pred             ccCcccc----chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhc
Confidence            5444333    33499999999976 4432  4899999999998764443

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PRK04311 selenocysteine synthase; Provisional

Probab=99.50  E-value=3.2e-12  Score=124.85  Aligned_cols=191  Identities=18%  Similarity=0.146  Sum_probs=137.6

Q ss_pred             CCHHHHHHHhcCcCCC---CC--C--CcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868          109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~---~Y--p--~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~  179 (334)
                      .++++.+++.+....+   .|  .  ..|  ...+++.+++++|.+  +.+++++++.++.+++.+ +.+||+|++++..
T Consensus        98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e  174 (464)
T PRK04311         98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE  174 (464)
T ss_pred             CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence            4577888876531111   12  1  112  468999999999964  567778888999988865 5899999999864


Q ss_pred             Ch----h--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc--cc--cCCcHHHHHHHHhC-CC
Q 019868          180 FT----M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI  248 (334)
Q Consensus       180 y~----~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP--tG--~~~~~~~l~~l~~~-~~  248 (334)
                      +.    .  ....+...|++++.++..+  ..++++++++++ +++++|++.+++||  +|  ...+.+++.++++. ++
T Consensus       175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi  251 (464)
T PRK04311        175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL  251 (464)
T ss_pred             hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence            43    1  2345567899999997532  357999999997 68999999999998  34  67899999999988 99


Q ss_pred             eEEEccCCcCcc----C---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          249 LVVLDEAYTEFS----G---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       249 ~lIvDeay~~~~----~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      ++|+|.+.+.+.    +   ..+........+-.++++|.+|.+|  |...|++++++++++.+++
T Consensus       252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li~~l~~  315 (464)
T PRK04311        252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGKKELIARLKK  315 (464)
T ss_pred             eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEcHHHHHHHhh
Confidence            999999643331    1   1111111123456799999999875  4468999999999987763

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.50  E-value=1.1e-12  Score=128.67  Aligned_cols=204  Identities=15%  Similarity=0.049  Sum_probs=141.6

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCC--CCCCc----C------hH-HHHHHHHHhcCCCCCCEEEe---CCHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPY--IYPDP----E------SR-RLRAALAKDSGLESDHILVG---CGADE  157 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~--~Yp~~----g------~~-~lr~~lA~~~~~~~~~I~~t---~G~~~  157 (334)
                      .+.|+|-..+|..  +|.+++++.. +...+  ++|..    |      .+ ..|+.++++++.+++++.++   +|+++
T Consensus        34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~  111 (452)
T PTZ00094         34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP  111 (452)
T ss_pred             HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence            4569998888865  5778888776 32212  33321    1      22 25678999999988887676   78889


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----------CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      +...++.+++++||+|++....|+.+......          .+.++..++.+.++.+|++++++.++..+++++++.  
T Consensus       112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--  189 (452)
T PTZ00094        112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--  189 (452)
T ss_pred             HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence            99999999999999999988787655432211          123344555555578999999999965567877764  


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ++.+|...|.+++.++++. |+++++|+++.-.......... ...+..+++.|++|++  .|.+.|++++++++.+.+
T Consensus       190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~~~~D~l~~S~hK~l--~GP~Gg~l~~~~~~~~~l  265 (452)
T PTZ00094        190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PFPYADVVTTTTHKSL--RGPRSGLIFYRKKVKPDI  265 (452)
T ss_pred             CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CCCCCcEEEcCCccCC--CCCCceEEEEecccchHH
Confidence            3459999999999999987 9999999999654321111110 0113459999999976  345558888876655443

>PLN00144 acetylornithine transaminase

Probab=99.50  E-value=5.8e-13  Score=127.75  Aligned_cols=230  Identities=15%  Similarity=0.162  Sum_probs=147.7

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++.++|+..+.  ..++ ..|++.+++.+ +...    ..|......+|-+.|++..+  .+.|+++++++++...++
T Consensus        12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~Al   89 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAAI   89 (382)
T ss_pred             CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHHH
Confidence            4677889987663  3343 45888887765 3221    11223334566667766543  468999999999999998


Q ss_pred             HHhc---C------C------CCEEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCCCHHHHHHhcc
Q 019868          164 RCVL---D------P------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVE  215 (334)
Q Consensus       164 ~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~d~~~l~~~l~  215 (334)
                      +...   .      +      ..+|+...-+|......+......             +..+|.     -|++.+++.+.
T Consensus        90 klAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~  164 (382)
T PLN00144         90 KFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQ  164 (382)
T ss_pred             HHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcC
Confidence            8432   1      0      246888888886554433322111             111211     26899998886


Q ss_pred             cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      ..++++|++.-.+||.|... +.   +++.++++. ++++|+||+|.+|...+....  ...-.+.   +.+|||.++ +
T Consensus       165 ~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~-~  240 (382)
T PLN00144        165 KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA-G  240 (382)
T ss_pred             CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-C
Confidence            56778888774488844433 23   344445554 999999999998865443222  1111111   778999997 8


Q ss_pred             ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHH---HHhcCchhh
Q 019868          289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAAC---AALQNPIYL  332 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~---~~L~~~~~~  332 (334)
                      |+|+||+++++++.+.+...  ...+..++++++++.   ..++++++.
T Consensus       241 G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~  289 (382)
T PLN00144        241 GLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL  289 (382)
T ss_pred             CcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence            99999999999999887532  233778999999999   555655543

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.49  E-value=1.2e-12  Score=125.14  Aligned_cols=186  Identities=15%  Similarity=0.152  Sum_probs=132.0

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~  202 (334)
                      ..+...+|.+.++++.|.+  +.+++++++.++..++.+++++||+|+++.+.|..    +...+...|++++.++.++.
T Consensus        62 ~~P~~~~lE~~la~leg~~--~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~  139 (384)
T PRK06434         62 GNPTVQAFEEKYAVLENAE--HALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL  139 (384)
T ss_pred             CChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence            4556789999999999853  67788888899999999999999999998876653    33556668999999985421


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      ..++       ++.+++++|++.+|.|||+.+.+.+++.++++. +  +++|.++.-... ..+.    ...-.+++.|.
T Consensus       140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-~~pl----~~gaDivv~S~  205 (384)
T PRK06434        140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-QNPL----DLGADVVIHSA  205 (384)
T ss_pred             hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-CCch----hcCCCEEEeec
Confidence            1222       333478999999999999999999999999987 5  567999742211 1122    23456999999


Q ss_pred             chhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++-+| .=.|.+++ ++++.+.++..+..  ...+++..+.+..-|+.
T Consensus       206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t  256 (384)
T PRK06434        206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT  256 (384)
T ss_pred             ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc
Confidence            99886434 33566666 55666766654322  44566665555555543

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.48  E-value=1.8e-12  Score=126.44  Aligned_cols=235  Identities=16%  Similarity=0.141  Sum_probs=148.9

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..|  ...++ .+|++.+++.+ ++.   .  ..|..+...+|.+.|+++.+-..+.++++++++++...
T Consensus        39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~  118 (433)
T PRK08117         39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG  118 (433)
T ss_pred             eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence            3467788999776  33444 46888888765 321   1  12334446678888888874344689999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCChhHHHHHH-HCC--C-----------eEEEeeCCCCCC------------CCHHHHHHh
Q 019868          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG--A-----------AVVKVPRKSDFS------------LNVELIADA  213 (334)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G--~-----------~v~~v~~~~~~~------------~d~~~l~~~  213 (334)
                      +++...  ....+|+..+-.|......+. ..+  .           .+..+|..+.+.            -|++.+++.
T Consensus       119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  198 (433)
T PRK08117        119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL  198 (433)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence            988422  223567777777765433221 111  0           112222111110            145566665


Q ss_pred             ccc----CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868          214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       214 l~~----~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (334)
                      +++    .++.+|++.......|.+.+    .+++.++++. ++++|+||+|.+|...+..... ...+...-+.+|||.
T Consensus       199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~  277 (433)
T PRK08117        199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG  277 (433)
T ss_pred             HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence            532    34667776655667788876    5566666665 9999999999987654332211 112222234699999


Q ss_pred             hcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          285 AGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       285 ~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      +| .|+++|++++++++++.+.....  .++.++++++++.++|+
T Consensus       278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~  321 (433)
T PRK08117        278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLE  321 (433)
T ss_pred             cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99 89999999999999887753322  26779999999998886

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.48  E-value=3.2e-12  Score=123.94  Aligned_cols=205  Identities=18%  Similarity=0.114  Sum_probs=136.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC--c-CCCCC-------CCcChHHHHH----HHHHhcCCCCCCE-EEeCCHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHI-LVGCGADELI  159 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~Y-------p~~g~~~lr~----~lA~~~~~~~~~I-~~t~G~~~~i  159 (334)
                      .+.++|-..+|-.  +|.+++++...  . ++.+|       ..+...+|.+    .+++++|.+  .. +.+++++.++
T Consensus        28 ~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~--~alv~~~SG~~A~  103 (416)
T PRK13034         28 QDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD--YANVQPHSGSQAN  103 (416)
T ss_pred             hcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC--ceEEecCCcHHHH
Confidence            3458887777765  78888887753  1 22212       1233567777    999999965  45 4456778899


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhH-HHHHHH--CCCeE--EEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMY-EFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~--~G~~v--~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ..++.+++++||+|+++...|... ..-++.  .+...  +.++. ..++.+|++++++.++..++++|++..+.  +|.
T Consensus       104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~  181 (416)
T PRK13034        104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPR  181 (416)
T ss_pred             HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccc
Confidence            999999999999999999988752 211111  12222  23332 23467899999998865578888876654  578


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhc
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAK  309 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~  309 (334)
                      ..+.+++.++++. ++++|+|+++...... +.....+  ....++++|++|.++  |-..|++++++ ++.+.++...
T Consensus       182 ~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~--g~~GG~v~~~~~~~~~~~~~~~  256 (416)
T PRK13034        182 ELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLR--GPRGGMILTNDEEIAKKINSAV  256 (416)
T ss_pred             ccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCC--CCCCeEEEECcHHHHHHHHhhc
Confidence            8899999999987 9999999998754421 1111111  235699999999873  33348877755 4445554433

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.48  E-value=1.8e-12  Score=125.86  Aligned_cols=235  Identities=14%  Similarity=0.067  Sum_probs=144.7

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CC---CCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.++|+..|.  ..++ ..|++.+++++ +...  ..   ++.+...+|-+.|++...- ..+.+++++++++++.
T Consensus        29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  108 (420)
T TIGR00700        29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE  108 (420)
T ss_pred             eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            34677889987663  3333 45788888765 3221  11   2333345677777776642 2368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC--------C-----eEEEeeCCCCCC-----------CCHHHHHHh
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG--------A-----AVVKVPRKSDFS-----------LNVELIADA  213 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G--------~-----~v~~v~~~~~~~-----------~d~~~l~~~  213 (334)
                      .+++.-.  ....+|+...-+|......+.. .|        .     .+..++....+.           -+++.+++.
T Consensus       109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (420)
T TIGR00700       109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI  188 (420)
T ss_pred             HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence            9988432  2335687777777654332222 11        0     112222111000           024566665


Q ss_pred             cc----cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868          214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       214 l~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (334)
                      +.    .+++.+|++.-...-+|..++    .+++.++++. ++++|+||+|.+|...+..... ...+....+.+|||.
T Consensus       189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~-~~~~~~pDi~~lsK~  267 (420)
T TIGR00700       189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFAC-EHEGPEPDLITTAKS  267 (420)
T ss_pred             HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHH-hhcCCCCCEEEeecc
Confidence            42    245677777655666888776    3344445554 9999999999998654432211 112222224469999


Q ss_pred             hcccccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          285 AGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       285 ~gl~G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++ +|+|+||+++++++++.+...  ...++.++++|+++.++|+
T Consensus       268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~  311 (420)
T TIGR00700       268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLA  311 (420)
T ss_pred             cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHH
Confidence            99 999999999999998887532  2347889999999977663

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.46  E-value=5.8e-12  Score=122.72  Aligned_cols=190  Identities=18%  Similarity=0.155  Sum_probs=135.2

Q ss_pred             CCHHHHHHHhcC-c-CC-CCC--C--CcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868          109 PPPEVREALGQL-K-FP-YIY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (334)
Q Consensus       109 ~~~~v~~al~~~-~-~~-~~Y--p--~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~  179 (334)
                      .++++.+++.+. . +. ..|  .  ..+  ...+++.+++++|.+.  .+++++++.++..++. .+.+||+|++++..
T Consensus        93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e  169 (454)
T TIGR00474        93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALN-TLAKGKEVIVSRGE  169 (454)
T ss_pred             CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence            467888887652 1 11 112  1  112  4789999999999753  4556677778888885 46899999999876


Q ss_pred             Chh------HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc--c--cCCcHHHHHHHHhC-CC
Q 019868          180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI  248 (334)
Q Consensus       180 y~~------~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~l~~~-~~  248 (334)
                      |..      +...++..|++++.++.++  ..|+++++++++ +++++|++.+++|++  |  ...+.+++.++++. ++
T Consensus       170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~  246 (454)
T TIGR00474       170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL  246 (454)
T ss_pred             hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence            432      2345567899999997532  358999999997 789999999999995  6  57899999999988 99


Q ss_pred             eEEEccCCcCccC-------CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          249 LVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       249 ~lIvDeay~~~~~-------~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ++++|...+.+..       ..+........+-++++.|.+|.+|  |-..|+++++++.++.+.
T Consensus       247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~~i~~l~  309 (454)
T TIGR00474       247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLK  309 (454)
T ss_pred             eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEECHHHHHhhh
Confidence            9999986433211       0111111223455699999999875  445799999998887654

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.46  E-value=7.2e-13  Score=138.47  Aligned_cols=169  Identities=16%  Similarity=0.098  Sum_probs=140.1

Q ss_pred             HHHHHHHHHhcCCCCCCEEEeCCHH----HHHHHHHHHhcCC-CC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868          132 RRLRAALAKDSGLESDHILVGCGAD----ELIDLIMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I~~t~G~~----~~i~~~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~  202 (334)
                      .++|+.+++++|.  ++|.++++++    +++.++++.+.++ ||    +|+++...|......+...|++++.++.+++
T Consensus       571 ~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~  648 (993)
T PLN02414        571 EDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAK  648 (993)
T ss_pred             HHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCC
Confidence            4899999999997  7999999999    8999999999866 88    8999999999888888889999999998777


Q ss_pred             CCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       203 ~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                      +.+|+++|++++++  +++++|++++|+|-+|...+.+++.++++. |+++++|.++..-..   ......+.+-++++.
T Consensus       649 G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~p~~~GaD~~~~  725 (993)
T PLN02414        649 GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV---GLTSPGFIGADVCHL  725 (993)
T ss_pred             CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc---CcCCccccCCCEEEe
Confidence            89999999999974  368999999999999999999999999987 999999999843111   111122445679999


Q ss_pred             CCchhhc----ccccchheeEcCHHHHHHH
Q 019868          280 TFSKRAG----LAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       280 S~SK~~g----l~G~R~G~l~~~~~~i~~l  305 (334)
                      |..|.|+    ..|-.+|++.+.+++...+
T Consensus       726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l  755 (993)
T PLN02414        726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFL  755 (993)
T ss_pred             cCCccCCcCcccCCCCeeeEEEchhhcccC
Confidence            9999765    3456689998887766543

>PRK02769 histidine decarboxylase; Provisional

Probab=99.46  E-value=1.7e-12  Score=124.08  Aligned_cols=171  Identities=13%  Similarity=0.055  Sum_probs=134.3

Q ss_pred             HHHHHHHHHhcCCCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCH
Q 019868          132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I--~~t~G~~~~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~  207 (334)
                      .+.++.+|+++|++++++  ++|+|+|++....+...  ..++++|++++-.|......++..|.+.+.++..+++.+|+
T Consensus        68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~  147 (380)
T PRK02769         68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY  147 (380)
T ss_pred             HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence            467888899999876665  88999999977665433  25788999999999999999999999888888766788999


Q ss_pred             HHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-C---CeEEEccCCcCccCC---C-CchhhhcCCCcEEE
Q 019868          208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL---E-SRMEWVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~---~~lIvDeay~~~~~~---~-~~~~~~~~~~~~i~  277 (334)
                      +++++.+++.  ++.+|+++.++|+||.+-|.+++.++++. +   +++++|.+|+.+.-.   . ..... .. +-..+
T Consensus       148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~-~~-~vDsi  225 (380)
T PRK02769        148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF-AD-GIDSI  225 (380)
T ss_pred             HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc-cC-CCCEE
Confidence            9999999742  38899999999999999999999999987 6   699999999875421   1 11111 11 45678


Q ss_pred             EcCCchhhcccccchheeEcCHHHHHHH
Q 019868          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       278 i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ..|.+|.++ .-..+|.+++.++..+.+
T Consensus       226 s~s~HK~~~-~P~g~G~l~~r~~~~~~~  252 (380)
T PRK02769        226 AISGHKFIG-SPMPCGIVLAKKKYVERI  252 (380)
T ss_pred             EECCcccCC-CCCCcEEEEEehhhhhhc
Confidence            889999655 345689999988776654

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.46  E-value=3.1e-12  Score=133.45  Aligned_cols=205  Identities=16%  Similarity=0.064  Sum_probs=140.9

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcC-c----CC-CCCCC-----cChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQL-K----FP-YIYPD-----PESRRLRAALAKDSGLESD--HILVGCGADELIDLIM  163 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~----~~-~~Yp~-----~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~  163 (334)
                      ++.|+.+.....++..+.+++... .    .. ..|..     .-..+.|+.+|+++|++++  .|++|+|+|+++++++
T Consensus        35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva  114 (805)
T PLN02724         35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG  114 (805)
T ss_pred             CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence            688887765544444555655432 1    11 11211     1256899999999999765  4899999999999999


Q ss_pred             HHh-cCCCCEEEEcCCCChhH---HHHHHHCCCeEEEeeCC--------CCCCCCH--HHHHHhcc---------cCCce
Q 019868          164 RCV-LDPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKPK  220 (334)
Q Consensus       164 ~~l-~~~gd~Vl~~~p~y~~~---~~~~~~~G~~v~~v~~~--------~~~~~d~--~~l~~~l~---------~~~~~  220 (334)
                      ..+ .++||+|+++.-.|.+.   ...++..|+++..++.+        ....+++  +.+++.++         ..+++
T Consensus       115 ~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~  194 (805)
T PLN02724        115 ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN  194 (805)
T ss_pred             HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence            987 58899999987777643   33445579999988753        2223333  55665431         13568


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC---------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccc
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR  291 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~---------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R  291 (334)
                      +|.+++.+|.||..+|.+++.++.+.         ++++++|.++.-..    ..-.+...+-.+++.|+.|.||.| -.
T Consensus       195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~----~piDv~~~~~Dfl~~S~HK~~GgP-~G  269 (805)
T PLN02724        195 LFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT----SPPDLSRYPADFVVVSFYKIFGYP-TG  269 (805)
T ss_pred             eEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC----CCCChhhcCCCEEEEecceeccCC-CC
Confidence            99999999999999999988666653         24799999876322    111223345569999999987622 23


Q ss_pred             hheeEcCHHHHHHHH
Q 019868          292 VGYGAFPLSIIEYLW  306 (334)
Q Consensus       292 ~G~l~~~~~~i~~l~  306 (334)
                      +|++++.+++.+.+.
T Consensus       270 ~G~L~vr~~~~~~l~  284 (805)
T PLN02724        270 LGALLVRRDAAKLLK  284 (805)
T ss_pred             ceEEEEehhhhhhhc
Confidence            899999888776654

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.44  E-value=4.4e-12  Score=123.18  Aligned_cols=233  Identities=15%  Similarity=0.141  Sum_probs=147.2

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC--C---CCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~--~---Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++.+ +....  .   ++.+...+|-+.|++..+. ..+.+++++++++++.
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK09792         36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence            45677889986653  3343 46788887765 32211  1   1223345677777776542 2368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCC-CCC----CHHHHHHhcc----
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE----  215 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~-~~~----d~~~l~~~l~----  215 (334)
                      .+++...  ....+|+...-+|......+.. .|.             .+..+|...+ ..+    +++.+++.++    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK09792        116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE  195 (421)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence            9988432  2235788888777654322211 111             1222332111 112    2467777765    


Q ss_pred             cCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      .+++.+|++.-.++++|... +.+.+++|.+   . ++++|+||+|.+|...+....  ..+. ...  +.+|+|.++ +
T Consensus       196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pD--i~t~gK~l~-~  271 (421)
T PRK09792        196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPD--LMTMAKSLA-G  271 (421)
T ss_pred             CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCc--EEEeehhhc-C
Confidence            24577888886689999866 8666666554   3 999999999999865443222  1211 112  568999998 8


Q ss_pred             ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+|+||+++++++.+.+...  ...++.++++++++.++++
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~  312 (421)
T PRK09792        272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN  312 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999999999998876532  2347789999996666553

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.42  E-value=1.6e-11  Score=115.83  Aligned_cols=199  Identities=17%  Similarity=0.165  Sum_probs=157.6

Q ss_pred             CCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      -|.+.++++++++..-..+++-|+.  -..++++.+...++.+. +-++++.+++.+++..+..+++|||+|++......
T Consensus        12 GP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~F   91 (383)
T COG0075          12 GPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKF   91 (383)
T ss_pred             CCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChH
Confidence            3566789999998874333444554  25678888888888764 55666788899999999999999999998887664


Q ss_pred             --hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc-cCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868          182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (334)
Q Consensus       182 --~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~  257 (334)
                        -+...++.+|++++.+..+.+-.+|+++++++++ .++.++|.+++.--+||...|.+++.++++. +.++|+|.+-+
T Consensus        92 G~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS  171 (383)
T COG0075          92 GERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS  171 (383)
T ss_pred             HHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc
Confidence              4677889999999999977777899999999998 3467899999999999999999999999998 99999999865


Q ss_pred             CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      -...    .-.+++++-++++.+--|.++.| -.+|++.++++.++++...
T Consensus       172 ~Gg~----~~~vd~wgiDv~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~  217 (383)
T COG0075         172 LGGE----PLKVDEWGIDVAITGSQKALGAP-PGLAFVAVSERALEAIEER  217 (383)
T ss_pred             CCCc----ccchhhcCccEEEecCchhccCC-CccceeEECHHHHHHHhcC
Confidence            3221    11234556679999999999653 2378898888888776644

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.42  E-value=7.6e-13  Score=121.88  Aligned_cols=195  Identities=22%  Similarity=0.259  Sum_probs=138.1

Q ss_pred             CCHHHHHHHhcCcCC-CCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH---
Q 019868          109 PPPEVREALGQLKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY---  183 (334)
Q Consensus       109 ~~~~v~~al~~~~~~-~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~---  183 (334)
                      +.|++.+++.+...+ ..|. ++...+|++.+++++|.+  ..+++++++.+...+++++++|++.|++..+.|...   
T Consensus         7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e--~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~   84 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKE--AALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET   84 (290)
T ss_dssp             S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred             CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCC--EEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence            568888888664322 3584 556899999999999954  557888999999999999999999999999987532   


Q ss_pred             HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCcc-ccCCcHHHHHHHHhC----CCeEEEc
Q 019868          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD  253 (334)
Q Consensus       184 ~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~----~~~lIvD  253 (334)
                      .......|++++.++.+++..+|++++++.+..     .++++|+|++|+|-. |.+++.+++++|.+.    ++.++.|
T Consensus        85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD  164 (290)
T PF01212_consen   85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD  164 (290)
T ss_dssp             THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred             chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence            223355899999999765478999999999875     467999999999964 889999999999876    9999999


Q ss_pred             cCCcCccC--CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       254 eay~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      -+=-.-.-  .+.....+. ..-+.+..|++|..++++  -+.++.++++++...+.
T Consensus       165 GARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~  218 (290)
T PF01212_consen  165 GARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ  218 (290)
T ss_dssp             ETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH
T ss_pred             hhhHHHhhhcccccHHHHh-hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH
Confidence            98422110  001111111 123366679999987765  25566788877654444

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.42  E-value=5.1e-12  Score=122.76  Aligned_cols=233  Identities=14%  Similarity=0.137  Sum_probs=148.3

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++++ +....     .++.+...+|-+.+++..+. ..+.++++++++++..
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK06777         36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence            34677889987663  3343 45778888765 32211     12333445677777776653 2468999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCCe-------------EEEeeCCC-CCC----CCHHHHHHhcc----
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKS-DFS----LNVELIADAVE----  215 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~~-------------v~~v~~~~-~~~----~d~~~l~~~l~----  215 (334)
                      .+++.-.  ....+|+...-+|......+.. .|..             +..++..+ ...    -+++.+++.++    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK06777        116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA  195 (421)
T ss_pred             HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence            9988432  2235688777777655433322 1210             11122111 111    13566777664    


Q ss_pred             cCCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      .+++.+|++.-..+..|. +++.+.+++|.+.    ++++|+||+|.+|...+....  ..+.... ++  ++||.++ +
T Consensus       196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD-iv--~~sK~l~-~  271 (421)
T PRK06777        196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD-LI--TMAKSLG-G  271 (421)
T ss_pred             CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC-EE--eeehhhc-C
Confidence            235677777766777886 5787777666554    999999999998865443221  1111122 32  6999999 9


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      |+|+||+++++++++.+.....  .++.++++++++.++|+
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~  312 (421)
T PRK06777        272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD  312 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9999999999999887764333  37789999999999986

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.41  E-value=5.3e-12  Score=115.96  Aligned_cols=164  Identities=20%  Similarity=0.237  Sum_probs=131.3

Q ss_pred             CCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeE
Q 019868          122 FPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAV  194 (334)
Q Consensus       122 ~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v  194 (334)
                      .++.|   .+|....|.+.||.+-|--  --+.+.+++.++..++..++++||.|+...--|+.    +....+..|.++
T Consensus        52 ~G~iYsRi~NPT~~vlE~RiAaLEGG~--aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v  129 (426)
T COG2873          52 PGNIYTRIMNPTTDVLEERIAALEGGV--AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV  129 (426)
T ss_pred             CCceeeeccCchHHHHHHHHHHhhcch--hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence            35556   4667889999999887521  23455677788999999999999999998888864    344556799999


Q ss_pred             EEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCC
Q 019868          195 VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD  273 (334)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~  273 (334)
                      ..++.     .|++.++++++ +++|+|++..-.||-+.+.+.+.+.++++. ++.+|+|..+..    + .+-..-+++
T Consensus       130 ~fvd~-----~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at----p-yl~rP~~hG  198 (426)
T COG2873         130 RFVDP-----DDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT----P-YLCRPIEHG  198 (426)
T ss_pred             EEeCC-----CCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc----c-eecchhhcC
Confidence            99864     26899999998 799999999999999999999999999998 999999998863    1 111122456


Q ss_pred             cEEEEcCCchhhcccccchheeEcC
Q 019868          274 NLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       274 ~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      ..|+++|.+|..|-.|--+|-++++
T Consensus       199 ADIVvHS~TK~igGhGt~iGG~iVD  223 (426)
T COG2873         199 ADIVVHSATKYIGGHGTAIGGVIVD  223 (426)
T ss_pred             CCEEEEeecccccCCccccceEEEe
Confidence            6799999999888788888888764

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.41  E-value=8e-12  Score=121.43  Aligned_cols=234  Identities=16%  Similarity=0.145  Sum_probs=147.9

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..++..++|+..|.  ..++ .+|++.+++++ +...     ..|+.+...+|-+.+++..+-. .+.++++++++++..
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e  115 (425)
T PRK07495         36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE  115 (425)
T ss_pred             eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            44677899987663  2344 46788888775 3221     1234444566777777776532 268999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CCCCC----HHHHHHhcc----
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DFSLN----VELIADAVE----  215 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~~~d----~~~l~~~l~----  215 (334)
                      .+++.-.  ....+|+...-.|......+.. .|.             .++.+|.+. ..+.+    ++.+++.++    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~  195 (425)
T PRK07495        116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD  195 (425)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence            9988432  2336788777777654322211 110             223333211 11222    445566653    


Q ss_pred             cCCceEEEEe-CCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc
Q 019868          216 REKPKCIFLT-SPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (334)
Q Consensus       216 ~~~~~~i~l~-~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G  289 (334)
                      .+++.+|++. ..+| +|. ..+.+.+++|.+.    ++++|+||+|.+|...+... .....+....+.+|||.++ .|
T Consensus       196 ~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~~~gv~pDi~tlsK~l~-~G  272 (425)
T PRK07495        196 PQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEVAADLTTMAKGLA-GG  272 (425)
T ss_pred             CCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eecccCCCCCEEeehhhhc-CC
Confidence            2457777776 3355 784 4677777776654    99999999999876544321 1222344456788999998 89


Q ss_pred             cchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          290 LRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       290 ~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +|+|++++++++.+.+....  ..|+.++++++++.++|+
T Consensus       273 ~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~  312 (425)
T PRK07495        273 FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLD  312 (425)
T ss_pred             ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999999999988775422  347789999996666553

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.41  E-value=2.5e-12  Score=122.87  Aligned_cols=167  Identities=18%  Similarity=0.225  Sum_probs=121.3

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~--  203 (334)
                      |..-..+.++.+|+.||.+ +..++++|++.++..++.+++++||+|+++..+|.+....+...|+++++++.. +.+  
T Consensus        64 p~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi  142 (417)
T PF01276_consen   64 PEGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI  142 (417)
T ss_dssp             TBTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred             CccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence            4334788999999999965 468889999999999999999999999999999999888888899999998742 222  


Q ss_pred             --CCCH-----HHHHHhccc-CCce---EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCc---hh
Q 019868          204 --SLNV-----ELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR---ME  267 (334)
Q Consensus       204 --~~d~-----~~l~~~l~~-~~~~---~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~---~~  267 (334)
                        .+++     +.+++++++ +..|   +++|++|+. .|.+++.+++.++++. +..|++||||... .+.+-+   ..
T Consensus       143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~  221 (417)
T PF01276_consen  143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA  221 (417)
T ss_dssp             BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred             ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence              3455     889888864 2334   499999986 8999999999999998 9999999999653 332111   11


Q ss_pred             hh---cCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868          268 WV---KKHDNLIVLRTFSKRAGLAGLRVG-YGAF  297 (334)
Q Consensus       268 ~~---~~~~~~i~i~S~SK~~gl~G~R~G-~l~~  297 (334)
                      ..   .....++++.|..|++  +++.=+ ++..
T Consensus       222 ~gad~~~~~~~~vvqS~HKtL--~altQts~lh~  253 (417)
T PF01276_consen  222 LGADRPNDPGIIVVQSTHKTL--PALTQTSMLHV  253 (417)
T ss_dssp             TTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEE
T ss_pred             ccCccccccceeeeechhhcc--cccccceEEEe
Confidence            11   1234579999999985  576654 4444

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PLN03032 serine decarboxylase; Provisional

Probab=99.41  E-value=6.3e-12  Score=119.68  Aligned_cols=173  Identities=14%  Similarity=0.069  Sum_probs=135.0

Q ss_pred             hHHHHHHHHHhcCCCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCC
Q 019868          131 SRRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN  206 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I--~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d  206 (334)
                      ..+.++.+++++|.+++++  ++|+|+|+++...+....  .+++.|+++.-.|.+....++..|..+..+|.+.++.+|
T Consensus        68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id  147 (374)
T PLN03032         68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEID  147 (374)
T ss_pred             HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCc
Confidence            3578888999999988877  999999999988877543  345689999999999999999999998899987888999


Q ss_pred             HHHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-C-----CeEEEccCCcCccC--CC--CchhhhcCCCc
Q 019868          207 VELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE--SRMEWVKKHDN  274 (334)
Q Consensus       207 ~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~-----~~lIvDeay~~~~~--~~--~~~~~~~~~~~  274 (334)
                      +++|++++++.  ++.+|+++..+|+||.+-|.+++.++++. +     +++.+|.+|..+.-  ..  +.... . ..-
T Consensus       148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~-~~v  225 (374)
T PLN03032        148 YDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-R-KPI  225 (374)
T ss_pred             HHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC-C-cCC
Confidence            99999999742  46788888899999999999999999986 4     58999999976431  11  11111 1 124


Q ss_pred             EEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ..+.-|.+|.+| .-..+|.++..++.++.+.
T Consensus       226 DSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~  256 (374)
T PLN03032        226 GSVSVSGHKFLG-CPMPCGVALTRKKHVKALS  256 (374)
T ss_pred             cEEEECcccccC-CCcCeEEEEEEchhhHhhc
Confidence            467789999655 3455899998877666553

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.41  E-value=2.8e-11  Score=116.26  Aligned_cols=203  Identities=13%  Similarity=0.129  Sum_probs=140.4

Q ss_pred             eeecCCCCCCCCCCHHHHHH-HhcCcCC-CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      +|||-+-   -++ ..+.++ +..+..+ ..| .++...+|++++++++|.+  +++.+++++.++.+++...++|||+|
T Consensus        40 ~iDLltD---sgT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~~--~av~v~sGT~Al~ll~~l~l~pGDeV  113 (450)
T TIGR02618        40 YIDLLTD---SGT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGFK--YVVPTHQGRGAENLLSQIAIKPGDYV  113 (450)
T ss_pred             EEEcccC---CCc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCCC--eEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence            4787442   222 666666 6654322 458 5677899999999999965  79999999999998887778999987


Q ss_pred             EEcCCCCh-hHHHHHHHCCCeEEEeeC----------CCCCCCCHHHHHHhcccC---CceEEEEeCCCCcc-ccCCcHH
Q 019868          174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE  238 (334)
Q Consensus       174 l~~~p~y~-~~~~~~~~~G~~v~~v~~----------~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPt-G~~~~~~  238 (334)
                        +.++|. .+...+...|+.++.++.          +.++.+|++++++++++.   ++++|.+.+++|-. |++++.+
T Consensus       114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~  191 (450)
T TIGR02618       114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA  191 (450)
T ss_pred             --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence              667774 444446788987777743          235789999999999742   34578888888855 8998876


Q ss_pred             HHHHHH---hC-CCeEEEccCCcC----cc------CCCCchhh-hcC--CCcEEEEcCCchhhccc-ccchheeE-cCH
Q 019868          239 DLLKIL---EM-PILVVLDEAYTE----FS------GLESRMEW-VKK--HDNLIVLRTFSKRAGLA-GLRVGYGA-FPL  299 (334)
Q Consensus       239 ~l~~l~---~~-~~~lIvDeay~~----~~------~~~~~~~~-~~~--~~~~i~i~S~SK~~gl~-G~R~G~l~-~~~  299 (334)
                      +++++.   +. |+.||.|.+...    |.      +.+..... +.+  ..-..++.|..|.++.+ |   |+++ .++
T Consensus       192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~  268 (450)
T TIGR02618       192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG---GFLCMNDD  268 (450)
T ss_pred             HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc---eEEEeCCH
Confidence            665554   44 999999998754    21      11111111 000  11235888999987655 4   6666 378


Q ss_pred             HHHHHHHHhcC
Q 019868          300 SIIEYLWRAKQ  310 (334)
Q Consensus       300 ~~i~~l~~~~~  310 (334)
                      ++++++++...
T Consensus       269 ~l~~k~r~~~~  279 (450)
T TIGR02618       269 EMFQSAKELVV  279 (450)
T ss_pred             HHHHHHHHHhh
Confidence            89998887743

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.41  E-value=6.8e-12  Score=115.36  Aligned_cols=224  Identities=17%  Similarity=0.174  Sum_probs=159.5

Q ss_pred             CCCCCCCCHHHHHHHhcCc--CCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868          103 NENPYGPPPEVREALGQLK--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~--~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~  179 (334)
                      .+|--++.|++++++.+..  ....|.+. -..++.+.+++.++.  +.+++++++|++....+.+.++||+.|++..-.
T Consensus         6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a   83 (342)
T COG2008           6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA   83 (342)
T ss_pred             cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence            3566678899999998754  34678654 578999999999996  789999999999999999999999999999888


Q ss_pred             ChhHHHH--HH-HCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868          180 FTMYEFD--AA-VNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (334)
Q Consensus       180 y~~~~~~--~~-~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~  247 (334)
                      |....+.  .. ..++..+.+....+..+++++++..+...     .+.++++.+.+|--|.+++.+++++|.+.    +
T Consensus        84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~  163 (342)
T COG2008          84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG  163 (342)
T ss_pred             cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence            8533221  11 23444454444567899999999987632     24455555555588999999999999875    8


Q ss_pred             CeEEEccCCcC--ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHHHHHhcCC----CCCcHHHHH
Q 019868          248 ILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQP----YNVSVAAEV  320 (334)
Q Consensus       248 ~~lIvDeay~~--~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~~~~~~----~~~~~~~q~  320 (334)
                      +.|.+|.+=..  ....+.....+..+ -+.+..++||..+.++   |.++ +++++++.+...+..    +.-..+..+
T Consensus       164 l~LHmDGAR~~nA~valg~~~~~~~~~-~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA  239 (342)
T COG2008         164 LPLHMDGARLANALVALGVALKTIKSY-VDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA  239 (342)
T ss_pred             CceeechHHHHHHHHHcCCCHHHHHhh-CCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence            99999987322  11112222222222 2355667999876665   7765 488888877654433    556778888


Q ss_pred             HHHHHhcCchhh
Q 019868          321 AACAALQNPIYL  332 (334)
Q Consensus       321 aa~~~L~~~~~~  332 (334)
                      ....+|+|.-|+
T Consensus       240 ~~~~~l~~~~~~  251 (342)
T COG2008         240 QGLYALEDDVWR  251 (342)
T ss_pred             HHHHHHhccHHH
Confidence            888899987664

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.39  E-value=1.3e-11  Score=121.00  Aligned_cols=234  Identities=19%  Similarity=0.157  Sum_probs=139.4

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+.  ..++ ..|.+.+++.+ +....     .+..+...+|-+.|++..+... +.++++++++++..
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e  129 (451)
T PRK06918         50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE  129 (451)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence            44677889987663  3344 46888888765 32211     1223334567777777765322 58999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCC----CCCC--------HHHHHH
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD----FSLN--------VELIAD  212 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~----~~~d--------~~~l~~  212 (334)
                      .+++.-.  ....+|+....+|......+.. .|-             .+..+|....    .+..        ++.+++
T Consensus       130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (451)
T PRK06918        130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN  209 (451)
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence            9988432  2335688777777654433322 121             1222221110    0111        123333


Q ss_pred             hc----ccCCceEEEEeCCCCcc-ccCC-cHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          213 AV----EREKPKCIFLTSPNNPD-GSII-NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       213 ~l----~~~~~~~i~l~~p~NPt-G~~~-~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                      .+    ..+++.+|+ ..|.... |.++ +.+.+++|.+.    ++++|+||+|.+|...+..... ...+...-+.|||
T Consensus       210 ~~~~~~~~~~iAavi-~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~-~~~~v~pDi~t~s  287 (451)
T PRK06918        210 FFISEVAPETIAAVV-MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAI-EHFDVVPDLITVS  287 (451)
T ss_pred             HHHhhcCCCceEEEE-ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehh-HhcCCCCCEEeee
Confidence            22    223444555 4565444 6544 44546666553    9999999999998654432211 1111111144899


Q ss_pred             hhhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          283 KRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       283 K~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      |.++ +|+|+||+++++++++.+.+...  .++.++++|.++.++|+
T Consensus       288 K~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~  333 (451)
T PRK06918        288 KSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLD  333 (451)
T ss_pred             hhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHH
Confidence            9999 99999999999999887754333  37889999999777764

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.38  E-value=6.8e-12  Score=119.27  Aligned_cols=187  Identities=17%  Similarity=0.137  Sum_probs=125.9

Q ss_pred             CCCCCCHHHHHHHhc-Cc----CCC-CC------CC--cChHHHHHHHHHhcCC-CCCCEEEeCC-HHHHHHHHHHHhcC
Q 019868          105 NPYGPPPEVREALGQ-LK----FPY-IY------PD--PESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCVLD  168 (334)
Q Consensus       105 ~~~~~~~~v~~al~~-~~----~~~-~Y------p~--~g~~~lr~~lA~~~~~-~~~~I~~t~G-~~~~i~~~~~~l~~  168 (334)
                      -|...|+.|++++.+ +.    .++ .|      +.  .-..+.|+.++++++. ++++|++|+| +|++++.++..++.
T Consensus         6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~   85 (355)
T cd00611           6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG   85 (355)
T ss_pred             CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence            355678899998865 21    111 11      11  1256899999999997 5678999988 99999999999987


Q ss_pred             ---CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCC-C-HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          169 ---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       169 ---~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~-d-~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                         +||.|+. .+....+...++..|+++..++.++++.+ + ++..+..++ +++++|.+++-.|.||..++     ++
T Consensus        86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~-----~i  158 (355)
T cd00611          86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD-----EV  158 (355)
T ss_pred             CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----ee
Confidence               5555543 22222233366778999888885433222 3 233333344 68999999999999999843     44


Q ss_pred             HhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       244 ~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ++. ++++++|.+..-....-    .+.+.+  +.+.|..|.||.+|  +|+++++++.++++.
T Consensus       159 ~~~~g~~~~VDa~qs~g~~~i----dv~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~  214 (355)
T cd00611         159 PDTGGVPLVADMSSNILSRPI----DVSKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKAR  214 (355)
T ss_pred             cccCCCeEEEEccccccCCCC----CHHHhC--EEEeecccccCCCc--eEEEEECHHHHhhcc
Confidence            455 89999999987433211    111222  45566899988666  799999998887644

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.37  E-value=1.3e-12  Score=119.29  Aligned_cols=180  Identities=23%  Similarity=0.293  Sum_probs=111.1

Q ss_pred             hHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHHHHHhcCC------CCEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868          131 SRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDP------GDKIVDCPPTFTMYEFDAAVNGAAVVKVP  198 (334)
Q Consensus       131 ~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~~~~l~~~------gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~  198 (334)
                      .++|.+.|.+++.      .+-..|++++|+++.++.++.+|...      --.|+...|.|+.|........-....+.
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            5789999988872      24458999999999999999988532      14799999999999988765433323332


Q ss_pred             -CCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEE
Q 019868          199 -RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (334)
Q Consensus       199 -~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i  276 (334)
                       ....|. +      . +...+-+=++++||||.|.+     .+.+++. +..+|.|-+|..=.+.    +.....+..|
T Consensus       125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyT----pI~~~aD~Di  187 (363)
T PF04864_consen  125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYT----PITAPADHDI  187 (363)
T ss_dssp             EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-------S-B--SE
T ss_pred             ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeeccccc----ccCCCCCCce
Confidence             112221 1      0 01345566889999999987     3444554 6678999999753332    2222345569


Q ss_pred             EEcCCchhhcccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      .+.|+||.-|-+|-|+||+++ ++++.+.|.+....  .+++.-+|.-+..+|+
T Consensus       188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk  241 (363)
T PF04864_consen  188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILK  241 (363)
T ss_dssp             EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred             EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence            999999999999999999999 56777888766543  6788888888887775

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.35  E-value=1.3e-11  Score=110.20  Aligned_cols=225  Identities=21%  Similarity=0.236  Sum_probs=157.6

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcC-CCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKF-PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~-~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl  174 (334)
                      .+||-. +.-.-|..++++++.+... ..-|. ++...+|.+.+|+.+| +..-+++++|++..+-.++..+-++|.+|+
T Consensus        23 ~vDLRS-DTvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~eii  100 (384)
T KOG1368|consen   23 SVDLRS-DTVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEII  100 (384)
T ss_pred             cccccc-ccccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceEE
Confidence            466654 2233455889999887432 24563 5568999999999999 345688888888777766666667999999


Q ss_pred             EcCCCCh-hHHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-------CCceEEEEeCCCCccc-cCCcHHHHHHH
Q 019868          175 DCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLKI  243 (334)
Q Consensus       175 ~~~p~y~-~~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------~~~~~i~l~~p~NPtG-~~~~~~~l~~l  243 (334)
                      +.+-+|- .|+.  .....|+.+.++..+++..+|++++++++..       +.+++|.|.|-+|-+| .++|.|++.++
T Consensus       101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v  180 (384)
T KOG1368|consen  101 VGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV  180 (384)
T ss_pred             eccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence            9998875 3332  4455789999998888889999999999873       2478999998877777 99999999887


Q ss_pred             HhC----CCeEEEccCCcCcc---CCCCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHHHHHhcCC----
Q 019868          244 LEM----PILVVLDEAYTEFS---GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQP----  311 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~~~~~~----  311 (334)
                      .++    ++.+.+|.+-..-+   .+-+.-......+.+-++  |||.+|.|   +|-++ ++.++|+..+..+..    
T Consensus       181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiC--LSKglgAP---VGSViVG~k~FI~kA~~~RKalGGG  255 (384)
T KOG1368|consen  181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGG  255 (384)
T ss_pred             HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhh--hhccCCCC---cccEEEccHHHHHHHHHHHHHhcCc
Confidence            664    89999998754322   111221222222333333  79987654   67664 588999866544433    


Q ss_pred             CCCcHHHHHHHHHHhcC
Q 019868          312 YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~  328 (334)
                      +..+....+|+..+|++
T Consensus       256 mRQsGvLaaaaLval~~  272 (384)
T KOG1368|consen  256 MRQSGVLAAAALVALDE  272 (384)
T ss_pred             hhHHHHHHHHHHHHhhc
Confidence            45677777777777765

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.31  E-value=7.3e-11  Score=114.79  Aligned_cols=236  Identities=14%  Similarity=0.194  Sum_probs=145.8

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..|  ...++ ..|++.+++++ +...    . .|+.+...+|.+.|++..+-..+.++++++++++...
T Consensus        38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  117 (423)
T PRK05964         38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV  117 (423)
T ss_pred             eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            3467788999766  34444 45888888765 3221    1 2444445677777877764334689999999999999


Q ss_pred             HHHHhc------C-CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC--CCCCHHHHHHhccc--
Q 019868          162 IMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD--FSLNVELIADAVER--  216 (334)
Q Consensus       162 ~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~--~~~d~~~l~~~l~~--  216 (334)
                      +++...      . +| .+|+...-.|......+.. .+-            .+..++...+  ...+++.+++.+.+  
T Consensus       118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~  197 (423)
T PRK05964        118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA  197 (423)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence            988432      1 23 5788888888654332222 111            1122222111  01127778877742  


Q ss_pred             CCceEEEEeC-CCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccccc
Q 019868          217 EKPKCIFLTS-PNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       217 ~~~~~i~l~~-p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                      +++.+|++.. .++..|... +.+.+++|.+   . ++++|+||++.+|...+..... ...+...-+-+++|.++..++
T Consensus       198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~  276 (423)
T PRK05964        198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL  276 (423)
T ss_pred             CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence            3455676654 467778766 6666666654   3 9999999999887543322111 111111223468999974448


Q ss_pred             chheeEcCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhc
Q 019868          291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       291 R~G~l~~~~~~i~~l~~~--------~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++|++++++++.+.+...        ...|+.++++.+++.++|+
T Consensus       277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~  321 (423)
T PRK05964        277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD  321 (423)
T ss_pred             cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence            999999999999887532        1225678888888888776

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.30  E-value=2.1e-10  Score=112.21  Aligned_cols=232  Identities=14%  Similarity=0.144  Sum_probs=139.8

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCC-----CCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++.+ +.....+     +.....+|.+.+++.++.. .+.++++++++++..
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  131 (443)
T PRK06058         52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE  131 (443)
T ss_pred             eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            45678899987663  3444 46888888765 3221111     2223446666676666422 257888888899999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHHC-CC-------------eEEEeeCCCCCC------C--------CHHHH
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI  210 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G~-------------~v~~v~~~~~~~------~--------d~~~l  210 (334)
                      .+++.-.  ...++|+....+|..+...+... +.             .+..++....+.      .        .++.+
T Consensus       132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  211 (443)
T PRK06058        132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI  211 (443)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence            9988321  23378999999897665443321 10             112222111111      0        12333


Q ss_pred             HHhcccCCceEEEEeCCCCccc-cCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCc
Q 019868          211 ADAVEREKPKCIFLTSPNNPDG-SII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFS  282 (334)
Q Consensus       211 ~~~l~~~~~~~i~l~~p~NPtG-~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~S  282 (334)
                      ++.+..+++.+|++ .|.+..| ... +.+.+   +++++. |+++|.||++.+|...+....  ..+-.+. ++  +++
T Consensus       212 ~~~~~~~~iAavi~-EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PD-iv--~~g  287 (443)
T PRK06058        212 EKQVGADNLAAVII-EPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPD-LI--TTA  287 (443)
T ss_pred             HHhhCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCC-EE--EEc
Confidence            34443345666664 5655554 443 34444   445555 999999999998864332221  1111122 33  458


Q ss_pred             hhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          283 KRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       283 K~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      |.+| .|+++|++++++++.+.+....  ..|+.|+++++++.++|+
T Consensus       288 K~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  333 (443)
T PRK06058        288 KGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIE  333 (443)
T ss_pred             cccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            9998 8999999999999988775432  347889999999999885

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.30  E-value=3.1e-10  Score=100.29  Aligned_cols=194  Identities=22%  Similarity=0.217  Sum_probs=152.6

Q ss_pred             CCHHHHHHHhcCcCCC--------C----CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 019868          109 PPPEVREALGQLKFPY--------I----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC  176 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~--------~----Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~  176 (334)
                      .+++.++++-+...++        +    -.-+...++.+.+|+++|++  .+-+|+|+.++-..++.+++++||.|++.
T Consensus        29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D--~~R~t~GARe~KfavMhal~~~gd~vV~D  106 (382)
T COG1103          29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD--EVRVTAGAREAKFAVMHALCKEGDWVVVD  106 (382)
T ss_pred             CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc--eeeecccchhhHHHHHHHhccCCCEEEEc
Confidence            4677777775531111        1    11234678889999999965  78899999999999999999999999999


Q ss_pred             CCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC-C
Q 019868          177 PPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (334)
Q Consensus       177 ~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~  247 (334)
                      ...|.....++..+|+++..||..  .++.++++...+.+++      ..+.+.+|++|..-.|.+.+.+.+.++++. +
T Consensus       107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~g  186 (382)
T COG1103         107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYG  186 (382)
T ss_pred             CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcC
Confidence            988877777888999999999942  4678888887776642      347788899999999999999999999998 9


Q ss_pred             CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +.++...+|....-    ..........++++|-.|.++ +.-.+|.+....++.+.+.+..
T Consensus       187 vPlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~S  243 (382)
T COG1103         187 VPLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRS  243 (382)
T ss_pred             CceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhc
Confidence            99999999974321    112223455699999999997 4457999999999998877665

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.30  E-value=3.3e-10  Score=110.39  Aligned_cols=208  Identities=16%  Similarity=0.025  Sum_probs=137.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCC------CCcC-h---HH-HHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIY------PDPE-S---RR-LRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y------p~~g-~---~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      .+.|+|-..||-.  ++.+.+++...   .+..+|      .... .   +. ..+...++++.+..+|-.-+|+. +..
T Consensus        49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~  125 (493)
T PRK13580         49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL  125 (493)
T ss_pred             hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence            3458888788754  57888888652   222233      2221 1   22 33344456788888898888886 455


Q ss_pred             HHHHHhcCC-------------------------------CCEEEEcCCCChhHHH---HHHHCC--CeEEEeeCC-CCC
Q 019868          161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYEF---DAAVNG--AAVVKVPRK-SDF  203 (334)
Q Consensus       161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~---~~~~~G--~~v~~v~~~-~~~  203 (334)
                      .++.++++|                               ||+|+..++..+.+..   .....|  .+++.++.+ +++
T Consensus       126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g  205 (493)
T PRK13580        126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG  205 (493)
T ss_pred             HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence            566667765                               7999988776653311   111122  445555543 457


Q ss_pred             CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcC
Q 019868          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRT  280 (334)
Q Consensus       204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S  280 (334)
                      .+|++++++.++ ++++.|++++.+|- |...+.+++.+|++. +.++++|+++.-.........  .-...+..++++|
T Consensus       206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT  283 (493)
T PRK13580        206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT  283 (493)
T ss_pred             ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence            899999999997 56677777777766 558899999999987 999999999975432211110  0011234599999


Q ss_pred             CchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       281 ~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      ++|++  .|.+.|++++++++++.+.+..
T Consensus       284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~  310 (493)
T PRK13580        284 THKTL--RGPRGGLVLAKKEYADAVDKGC  310 (493)
T ss_pred             Chhhc--cCCCeEEEEecHHHHHHHhhCC
Confidence            99986  3555699999999999886554

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.29  E-value=4.8e-11  Score=115.81  Aligned_cols=191  Identities=18%  Similarity=0.106  Sum_probs=137.2

Q ss_pred             CCCHHHHHHHhc-CcC--C--CCCCCc-C-hHHHHHHHHHhcCCC-C-CCEEE--eCCHHHHHHHHHHHhc--------C
Q 019868          108 GPPPEVREALGQ-LKF--P--YIYPDP-E-SRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D  168 (334)
Q Consensus       108 ~~~~~v~~al~~-~~~--~--~~Yp~~-g-~~~lr~~lA~~~~~~-~-~~I~~--t~G~~~~i~~~~~~l~--------~  168 (334)
                      ++.|++.+.+.. +..  .  ..+|.. . .++.++.+++++|++ + +++..  |+|+++++.+.+.+..        .
T Consensus        52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~  131 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA  131 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence            345667776654 221  1  112221 1 356888889999987 3 45655  8999999998876542        1


Q ss_pred             CC-----CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       169 ~g-----d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      .|     ..|+++.-.|.++...++..|++++.+|.+++ +.+|+++|+++++ +++.+|+++..+|.||.+.|.+++.+
T Consensus       132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~  210 (431)
T TIGR01788       132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND  210 (431)
T ss_pred             cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence            12     36899999999999999999999999997654 5899999999997 67889999999999999999999999


Q ss_pred             HHhC-------CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          243 ILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       243 l~~~-------~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +++.       ++++.+|.+|+.+..   .+.....+....-..+.-|.+|.+ +....+|.+++.++
T Consensus       211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~  277 (431)
T TIGR01788       211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDE  277 (431)
T ss_pred             HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhcc-CCCCCcEEEEEeCh
Confidence            9963       699999999986431   111111122233456888999953 33445899988543

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.28  E-value=7.2e-11  Score=113.21  Aligned_cols=188  Identities=11%  Similarity=0.006  Sum_probs=132.1

Q ss_pred             CCCCCCHH-HHHHHhcCcC--CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEEeC-CHHHHHHHHHHHhcCC-CCEEEEc
Q 019868          105 NPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVDC  176 (334)
Q Consensus       105 ~~~~~~~~-v~~al~~~~~--~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~t~-G~~~~i~~~~~~l~~~-gd~Vl~~  176 (334)
                      -|..+++. +++++..-..  .++-+..  -..+.|+.++++++++ +++|+++. ++|.+++.++..++++ ++.|+. 
T Consensus        19 Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-   97 (378)
T PRK03080         19 GPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-   97 (378)
T ss_pred             CCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence            35556677 8888875211  1332322  2678999999999984 45799876 8999999999998875 445554 


Q ss_pred             CCCChh-HHH-HHHHCCC-eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEc
Q 019868          177 PPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD  253 (334)
Q Consensus       177 ~p~y~~-~~~-~~~~~G~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvD  253 (334)
                      .-.|+. +.. .++..|+ +++.++.+.+..+|++++    +  .++.|.+++..|.||...+.+++.+ .+.++++|+|
T Consensus        98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i----~--~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVD  170 (378)
T PRK03080         98 WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAV----D--FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICD  170 (378)
T ss_pred             eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhc----C--CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEe
Confidence            446654 222 2356788 888888666667787763    2  2567899999999999999999888 2239999999


Q ss_pred             cCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      .+.+-....-.. .   +  -.+++.|..|.++. -..+|+++++++.++.+..
T Consensus       171 a~qs~G~~pidv-~---~--iD~~~~s~~K~l~~-P~G~g~l~v~~~~~~~~~p  217 (378)
T PRK03080        171 ATSAAFALPLDW-S---K--LDVYTFSWQKVLGG-EGGHGMAILSPRAVERLES  217 (378)
T ss_pred             cccccccCCCCH-H---H--CcEEEEehhhhCCC-CCceEEEEECHHHHHhhhc
Confidence            988754322111 1   1  24999999997753 1348999999988877653

>PRK15029 arginine decarboxylase; Provisional

Probab=99.27  E-value=2.9e-10  Score=116.15  Aligned_cols=167  Identities=16%  Similarity=0.109  Sum_probs=128.6

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~--  203 (334)
                      |..-..+..+..|+.||.+ ...++++|++.++..++.+++++||+|+++..+|-+....+.+.|++++++... +.+  
T Consensus       203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi  281 (755)
T PRK15029        203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI  281 (755)
T ss_pred             CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence            4444789999999999975 468889999999999999999999999999999999888889999999998632 222  


Q ss_pred             --CCC-----HHHHHHhccc-CCce--------EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCc
Q 019868          204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR  265 (334)
Q Consensus       204 --~~d-----~~~l~~~l~~-~~~~--------~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~  265 (334)
                        .++     ++.+++++++ +..+        +++|++|+. .|.+++.+++.++++. ++.|++||||... .+.+..
T Consensus       282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~  360 (755)
T PRK15029        282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_pred             ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence              334     8889888753 2233        899999986 8999999999999987 9999999999653 333221


Q ss_pred             h--hhh-----cCCCc-EEEEcCCchhhcccccchh-eeEc
Q 019868          266 M--EWV-----KKHDN-LIVLRTFSKRAGLAGLRVG-YGAF  297 (334)
Q Consensus       266 ~--~~~-----~~~~~-~i~i~S~SK~~gl~G~R~G-~l~~  297 (334)
                      .  ..+     ...+. ++++.|.+|++  +++.-| ++.+
T Consensus       361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv  399 (755)
T PRK15029        361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV  399 (755)
T ss_pred             cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence            1  111     11233 49999999985  566655 4444

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.26  E-value=1.2e-10  Score=108.15  Aligned_cols=208  Identities=19%  Similarity=0.142  Sum_probs=145.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCC------CcC----hHH-HHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp------~~g----~~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.|.|=..||-.  ++.+.++....   .+..+||      ...    .+. ..+...+++|.+-.||...+|+.. ...
T Consensus        27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~A-N~a  103 (413)
T COG0112          27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQA-NQA  103 (413)
T ss_pred             hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHH-HHH
Confidence            458886677753  57888887652   2333343      222    122 333444678998889999999865 455


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHH---HHCC--CeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G--~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++.++++|||+|+..+-.++.+....   ...|  .+++.++.+ ++..+|.|++++...+.++|+|+.-.-..|  ..+
T Consensus       104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~i  181 (413)
T COG0112         104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPI  181 (413)
T ss_pred             HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc--ccc
Confidence            66669999999998887776554322   1223  355556644 668999999999998889999997643333  678


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCCC
Q 019868          236 NDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY  312 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~~  312 (334)
                      +-+++++|++. |.++++|.+|. ++...+.....+.  ...++..|.+|+|  .|.|.|.+.++. ++.+.+.+.-.+.
T Consensus       182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg  257 (413)
T COG0112         182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG  257 (413)
T ss_pred             CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence            99999999998 99999999984 3443222222222  2459999999986  799999999985 8888888877663

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.25  E-value=8.1e-11  Score=110.43  Aligned_cols=234  Identities=17%  Similarity=0.201  Sum_probs=158.1

Q ss_pred             hCCCCCCeeecCCC--CCCCC-CCHHHHHHHhcC-----cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-----~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +..+++.+|||..|  .+.++ .+|.+++++++.     ...+.|.++...+|-+.|++..+ ..+.|+++|+++|+++.
T Consensus        37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea  115 (404)
T COG4992          37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA  115 (404)
T ss_pred             ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence            45578889998766  45555 679999998752     22356766667788888888887 68899999999999999


Q ss_pred             HHHHhc---C-C-CCEEEEcCCCChhHHHHHHHCCCeEEEe----eCCCCCC----CCHHHHHHhcccCCceEEEEeCCC
Q 019868          162 IMRCVL---D-P-GDKIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       162 ~~~~l~---~-~-gd~Vl~~~p~y~~~~~~~~~~G~~v~~v----~~~~~~~----~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      +++.-.   . + ..+|+....+|..-...+-..+.+..+-    |..+++.    =|+++++++++ +++.+|++.-..
T Consensus       116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ  194 (404)
T COG4992         116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ  194 (404)
T ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence            998432   2 2 2477777777753222221122222110    1111111    17899999998 589999998778


Q ss_pred             CccccCCcHHH----HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          229 NPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       229 NPtG~~~~~~~----l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      --.|...+.++    +++||+. |+++|.||++.++...+.....- .++-.--|-++.|.+| .|+.+|.+++.+.+.+
T Consensus       195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e-~~gV~PDI~tlaK~Lg-GG~PigA~la~~~~~~  272 (404)
T COG4992         195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYE-HYGVEPDILTLAKALG-GGFPIGAMLATEEIAS  272 (404)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHH-HhCCCCCEEEeecccc-CCccceeeEEchhhhh
Confidence            88888876543    3455665 99999999999987655443321 1111122335899998 8899999999955555


Q ss_pred             HHH--HhcCCCCCcHHHHHHHHHHhc
Q 019868          304 YLW--RAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       304 ~l~--~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .+.  .....|+-|+++.+++.++|+
T Consensus       273 ~~~~G~HgSTfGGNpLacAv~~a~l~  298 (404)
T COG4992         273 AFTPGDHGSTFGGNPLACAVALAVLE  298 (404)
T ss_pred             cCCCCcccCCCCcCHHHHHHHHHHHH
Confidence            443  233348889999999888775

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.25  E-value=2.3e-10  Score=110.28  Aligned_cols=230  Identities=15%  Similarity=0.134  Sum_probs=141.2

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-CCCCCCcChHHHHHHHHHhcCC--CCCCEEEeCCHHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~Yp~~g~~~lr~~lA~~~~~--~~~~I~~t~G~~~~i~~~~~  164 (334)
                      .+++.++|+..+  ...++ ..|++.+++.+ +.. .+.++ ....+...++|+.+.-  ..+.++++++++++...+++
T Consensus        33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik  111 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK  111 (395)
T ss_pred             CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence            356788999764  33343 35888888765 221 11111 1223445555555531  24689999999999999998


Q ss_pred             Hhc------CCC-CEEEEcCCCChhHHHHH-HHCCCeEE---EeeCCCCC----CCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          165 CVL------DPG-DKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       165 ~l~------~~g-d~Vl~~~p~y~~~~~~~-~~~G~~v~---~v~~~~~~----~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      ...      ++| .+|+..+..|......+ ...|....   ..|...++    ..|++.+++.+. +++.+|++...++
T Consensus       112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~  190 (395)
T PRK03715        112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG  190 (395)
T ss_pred             HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence            654      123 57888888776544333 23332211   11111111    247899999886 5688888886677


Q ss_pred             ccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       230 PtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      ..|...+    .+++.++++. ++++|+||+|.+|...+....  ..+- ..+  +.+|+|.+| .|+.+|.+++++++.
T Consensus       191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PD--i~t~gK~lg-~G~p~~av~~~~~i~  266 (395)
T PRK03715        191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPD--IMTLGKGIG-GGVPLAALLAKAEVA  266 (395)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCc--eeeehhhhh-CCcceEEEEEccccc
Confidence            7787765    5566666665 999999999998754333211  1111 122  347899998 678899999988875


Q ss_pred             HHHHH-hcCCCCCcHHHHHHHHHHhc
Q 019868          303 EYLWR-AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       303 ~~l~~-~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ..... ....|+.++++.+++.+.|+
T Consensus       267 ~~~~~~~~~T~~g~pl~~aaala~L~  292 (395)
T PRK03715        267 VFEAGDQGGTYNGNPLMTAVGVAVIS  292 (395)
T ss_pred             cccCCCcCCCCCCCHHHHHHHHHHHH
Confidence            32111 12236778888888877764

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.25  E-value=9.9e-10  Score=105.94  Aligned_cols=181  Identities=12%  Similarity=0.104  Sum_probs=124.1

Q ss_pred             CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHHHHHHCCCeEEEee---
Q 019868          124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP---  198 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~---  198 (334)
                      ..| .++...+|++++++++|.+  +++.++.++.++.+++...++|||+|  +..+|. .....+...|+..+.+.   
T Consensus        72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~  147 (460)
T PRK13237         72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE  147 (460)
T ss_pred             hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence            447 5668999999999999965  69999999999998877678999975  444443 33333667888666553   


Q ss_pred             -------CCCCCCCCHHHHHHhcccC---CceEEEEeCCCCcc-ccCCcHHH---HHHHHhC-CCeEEEccCCcCc----
Q 019868          199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDED---LLKILEM-PILVVLDEAYTEF----  259 (334)
Q Consensus       199 -------~~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPt-G~~~~~~~---l~~l~~~-~~~lIvDeay~~~----  259 (334)
                             ...++.+|++++++++++.   ++++|.+.+++|.. |+..+.++   +.++++. |+.||+|.+....    
T Consensus       148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f  227 (460)
T PRK13237        148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF  227 (460)
T ss_pred             ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence                   1346789999999999742   34467777888988 68886644   4555555 9999999987532    


Q ss_pred             c------CCCCchhh-hc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhcC
Q 019868          260 S------GLESRMEW-VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ  310 (334)
Q Consensus       260 ~------~~~~~~~~-~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~  310 (334)
                      .      +.+..... +.  ..--..++.|++|.++.+-  .|+++. ++++.++++...-
T Consensus       228 I~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~  286 (460)
T PRK13237        228 IKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVV  286 (460)
T ss_pred             hcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhcc
Confidence            1      11111110 00  0123477788999876541  378777 6788888877743

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.23  E-value=8.1e-10  Score=102.30  Aligned_cols=255  Identities=17%  Similarity=0.131  Sum_probs=159.3

Q ss_pred             CCChHHHHHhhhhCCCCCCC---cHHHHHHHh------CCC-CCCe-eecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC--
Q 019868           62 TGDSFIRSHLRKLKPYQPIL---PFEVLSIQL------GRK-PEDI-VKIDANENPYGPPPEVREALGQ-LK-FPYIY--  126 (334)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~-~~~~-i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y--  126 (334)
                      +.+.|+++.+.+-+-....+   .+..++..+      ... .+++ +.-+.......-.|+|.+|+.+ ++ ++.+-  
T Consensus       128 ~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGG  207 (570)
T KOG1360|consen  128 DYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGG  207 (570)
T ss_pred             cHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcCC
Confidence            45677888776644433222   333333332      111 1222 2222222344567899988876 32 21111  


Q ss_pred             -----CC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868          127 -----PD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP  198 (334)
Q Consensus       127 -----p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~  198 (334)
                           +. .-..+|.+.+|++.+-+. -+++++. --+.+..+..|.  -||-+|+-..-.+.....-.+..++.-+.+.
T Consensus       208 TRNIsG~s~~hv~LE~eLA~LHqK~a-ALlFsSC-fVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFr  285 (570)
T KOG1360|consen  208 TRNISGHSKHHVRLEAELADLHQKEA-ALLFSSC-FVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFR  285 (570)
T ss_pred             ccccCCCCchhhhHHHHHHHHhcCcc-eeeeeee-eeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeec
Confidence                 11 114589999999987332 3333222 122222222222  3788888878888877777777776544444


Q ss_pred             CCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhh----c
Q 019868          199 RKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----K  270 (334)
Q Consensus       199 ~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~----~  270 (334)
                      .  +   |++.|++.++.   ..+|+|-+.+.+..+|.+.+.||+.++++. |.+-++||+++-..+++.-....    -
T Consensus       286 H--N---D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGv  360 (570)
T KOG1360|consen  286 H--N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGV  360 (570)
T ss_pred             c--C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCc
Confidence            3  2   67777777653   457899999999999999999999999998 99999999997654432211111    1


Q ss_pred             CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC----CCcHHHHHHHHHHh
Q 019868          271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAAL  326 (334)
Q Consensus       271 ~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~----~~~~~~q~aa~~~L  326 (334)
                      ...-.|+.+++.|.||+-|   ||+.+...+++.++.+...|    +.++.....|+.+.
T Consensus       361 m~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaV  417 (570)
T KOG1360|consen  361 MHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAV  417 (570)
T ss_pred             chhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHH
Confidence            2334599999999999999   99999999999998877652    45565555444443

>PLN02271 serine hydroxymethyltransferase

Probab=99.23  E-value=1.1e-09  Score=107.44  Aligned_cols=196  Identities=16%  Similarity=0.082  Sum_probs=133.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCC------CcC-hHHH----HHHHHHhcCCCC----CCEEEeCCHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD  156 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp------~~g-~~~l----r~~lA~~~~~~~----~~I~~t~G~~  156 (334)
                      .+-|.|=..||-.  ++.+++++...   .+..+||      ... ..++    .+...+.++++.    .||..-+|+ 
T Consensus       148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs-  224 (586)
T PLN02271        148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCT-  224 (586)
T ss_pred             hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHH-
Confidence            3457887777754  58888888752   2333333      211 1222    233445678776    577777665 


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHHH---------HHHCCCeEEEee--C-CCCCCCCHHHHHHhcccCCceEEEE
Q 019868          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~G~~v~~v~--~-~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      .+...++.+|++|||+|+..+..|+.+...         +...|..+..++  . ++++.+|++++++.....++|+|++
T Consensus       225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~  304 (586)
T PLN02271        225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC  304 (586)
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence            566677778999999999988888755432         233455444444  4 3567899999999555589999999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ..-.||  ..++.+++.+|++. ++++++|.++.-. ...+.....+.  ...++..|.+|++  .|-|.|.+..++
T Consensus       305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~--~aDvvt~TTHKtL--rGPrGG~I~~r~  375 (586)
T PLN02271        305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD--YCDIVTSTTHKSL--RGPRGGIIFYRK  375 (586)
T ss_pred             Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc--CCcEEEeCCcccC--CCCCceEEEecc
Confidence            877888  78999999999997 9999999999643 22211111111  2459999999975  688889998865

>PRK06541 hypothetical protein; Provisional

Probab=99.22  E-value=9.1e-10  Score=108.07  Aligned_cols=233  Identities=17%  Similarity=0.181  Sum_probs=143.2

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..+  ...++ .+|++.+++.+ +...     ..|+.+...+|.+.|++..+-..+.++++++++++...
T Consensus        48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~  127 (460)
T PRK06541         48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES  127 (460)
T ss_pred             eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence            3467788998766  23444 45888888765 3211     23444445677777777765334689999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC-----CCCC--------H
Q 019868          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD-----FSLN--------V  207 (334)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~-----~~~d--------~  207 (334)
                      +++....        ...+|+...-+|......+.. .|.            .+..+|..+.     +.-+        +
T Consensus       128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (460)
T PRK06541        128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA  207 (460)
T ss_pred             HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence            8884321        136788777777644332221 111            1222332111     1112        3


Q ss_pred             HHHHHhccc--CCceEEEEeCC-CCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEE
Q 019868          208 ELIADAVER--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~--~~~~~i~l~~p-~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~  277 (334)
                      +.+++.++.  .+..+.++..| .++.|.+.+    .+++.++++. ++++|+||+|..|...+.....  .+- ...++
T Consensus       208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDiv  286 (460)
T PRK06541        208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDII  286 (460)
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEE
Confidence            567776642  23344444555 889999887    5555666665 9999999999877432222111  111 12233


Q ss_pred             EcCCchhhccccc-chheeEcCHHHHHHHHHhc------CCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~~------~~~~~~~~~q~aa~~~L~  327 (334)
                        +|+|.++ .|+ ++|++++++++.+.+.+..      ..++.++++.+++.+.|+
T Consensus       287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~  340 (460)
T PRK06541        287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLD  340 (460)
T ss_pred             --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence              4999998 887 9999999999988775431      235678888888877764

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=99.20  E-value=5.9e-10  Score=99.80  Aligned_cols=176  Identities=19%  Similarity=0.265  Sum_probs=129.3

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEE-cCCCChhHHHHHH----------HC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD-CPPTFTMYEFDAA----------VN  190 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~-~~p~y~~~~~~~~----------~~  190 (334)
                      ++|-+-|...|.+..|+.++.+..  +..+.+| |++|..++..+++|||+.+. ..--|....+..-          .+
T Consensus        60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~isG-THAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df  138 (416)
T COG4100          60 YGYDDLGRDTLERVYAQVFGAEAALVRPQIISG-THAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF  138 (416)
T ss_pred             CCccccchhHHHHHHHHHhccccceeeeeeecc-hhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence            555677888999999999987654  4445555 57899999899999999863 3445655555432          35


Q ss_pred             CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC------CCeEEEccCCcCccCCC
Q 019868          191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLE  263 (334)
Q Consensus       191 G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~~~  263 (334)
                      |.....+|+..+..+|.+.+...++ +++|+|-+. +-..-.--.++.++++++++.      ++++++|++|.+|....
T Consensus       139 gi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~  217 (416)
T COG4100         139 GIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK  217 (416)
T ss_pred             CcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence            6778888887788999999999998 799999987 333323334677777777663      89999999999999654


Q ss_pred             CchhhhcCCCcEEEEcCCchhhcccccc--hheeEcCHHHHHHHH
Q 019868          264 SRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLW  306 (334)
Q Consensus       264 ~~~~~~~~~~~~i~i~S~SK~~gl~G~R--~G~l~~~~~~i~~l~  306 (334)
                      .+...    +..++.+|+-|+-| .|+-  .||+++.++++++..
T Consensus       218 EPt~v----GaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~  257 (416)
T COG4100         218 EPTHV----GADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA  257 (416)
T ss_pred             Ccccc----chhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence            43332    33588999999865 3332  389999999988653

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.20  E-value=1.1e-09  Score=106.75  Aligned_cols=228  Identities=16%  Similarity=0.162  Sum_probs=144.9

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++..++|+..|  ...++ .+|++.+++.+ +.   ....| ..+...+|.+.|++...-..+.++++++++++.+.+
T Consensus        71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A  150 (442)
T TIGR03372        71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA  150 (442)
T ss_pred             ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence            3567888998776  44554 46888888765 32   22223 444456777777777653346799999999999999


Q ss_pred             HHHhcC----CC-CEEEEcCCCChhHHHHHHHC-CCe------------EEEeeCCCCCCCCHHHHHHhccc-----CCc
Q 019868          163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVN-GAA------------VVKVPRKSDFSLNVELIADAVER-----EKP  219 (334)
Q Consensus       163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~-G~~------------v~~v~~~~~~~~d~~~l~~~l~~-----~~~  219 (334)
                      ++.-..    .| .+|+...-.|......+... |-.            +..+|.     .|.+.+++.++.     .++
T Consensus       151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~v  225 (442)
T TIGR03372       151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDV  225 (442)
T ss_pred             HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcE
Confidence            884321    23 57888888776544332222 211            122221     256677666631     346


Q ss_pred             eEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cc
Q 019868          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LR  291 (334)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R  291 (334)
                      .+|++.......|...+    .++++++++. ++++|+||++.+|...+....  ..+- ..+++  +++|.+| .| +.
T Consensus       226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lg-~G~~P  301 (442)
T TIGR03372       226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDIL--CLAKALG-GGVMP  301 (442)
T ss_pred             EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCee--eehhhhc-CCccc
Confidence            67777655666788776    5666677766 999999999987754333211  1111 12233  4899997 67 68


Q ss_pred             hheeEcCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhc
Q 019868          292 VGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       292 ~G~l~~~~~~i~~l~~----~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +|.+++.+++.+.+..    ....|+-|+++.+++.++|+
T Consensus       302 igavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~  341 (442)
T TIGR03372       302 IGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATIN  341 (442)
T ss_pred             ceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHH
Confidence            9999999998887732    12235668888888888774

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.19  E-value=3e-10  Score=108.19  Aligned_cols=207  Identities=20%  Similarity=0.138  Sum_probs=125.6

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC------cC----hHH-HHHHHHHhcCCCCC----CEEEeCCHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PE----SRR-LRAALAKDSGLESD----HILVGCGADEL  158 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~------~g----~~~-lr~~lA~~~~~~~~----~I~~t~G~~~~  158 (334)
                      -|+|-..||-.  +|.+++++.. +  .+..+||.      ..    .+. ..+.+.++++++++    +|-.-+| +.+
T Consensus        22 ~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SG-s~A   98 (399)
T PF00464_consen   22 TLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSG-SQA   98 (399)
T ss_dssp             SEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSH-HHH
T ss_pred             CccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCc-hHH
Confidence            48887778754  5788888875 2  22233332      11    222 34445567898854    4444444 467


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHH---HH-------HHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEF---DA-------AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      ...++.+|++|||+|+..++..+.+..   ..       .....+.+.++.+ +++.+|.+++++.+++.++|+|++..-
T Consensus        99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S  178 (399)
T PF00464_consen   99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGAS  178 (399)
T ss_dssp             HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-S
T ss_pred             HHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECch
Confidence            788888899999999988877754421   11       1134567777754 678999999999998889999998755


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-------
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------  298 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-------  298 (334)
                      +.|  ..++.+++++|++. +.++++|-++. ++...+-....+. + ..++.+|..|+|  +|-|.|.+..+       
T Consensus       179 ~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~~  252 (399)
T PF00464_consen  179 SYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-Y-ADVVTGSTHKTL--RGPRGGIILTNKGSKNVD  252 (399)
T ss_dssp             STS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-T-SSEEEEESSGGG---SSS-EEEEES-SEEEE-
T ss_pred             hcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCccc-c-ceEEEeeccccc--cccCceEEEEcCCccccC
Confidence            544  66889999999987 99999999984 3332221111122 1 349999999986  79999999999       


Q ss_pred             -------HHHHHHHHHhcCCC
Q 019868          299 -------LSIIEYLWRAKQPY  312 (334)
Q Consensus       299 -------~~~i~~l~~~~~~~  312 (334)
                             +++.+.+.+...+.
T Consensus       253 ~~~~~~~~~l~~~I~~avfP~  273 (399)
T PF00464_consen  253 KKGKEIDEELAEKIDSAVFPG  273 (399)
T ss_dssp             TTS-EEEHHHHHHHHHHHTTT
T ss_pred             CcccccHHHHHHHhccccCCC
Confidence                   88999999887773

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.19  E-value=1.9e-09  Score=106.03  Aligned_cols=200  Identities=17%  Similarity=0.082  Sum_probs=124.0

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCC------Cc-ChHHHHH----HHHHhcCCCCCCEEE---eCCHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DP-ESRRLRA----ALAKDSGLESDHILV---GCGADEL  158 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp------~~-g~~~lr~----~lA~~~~~~~~~I~~---t~G~~~~  158 (334)
                      +-|+|-..||..  ++.+++++.. +  .+..+||      .. ...++.+    ...+.++...+.+++   .++++.+
T Consensus        35 ~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~A  112 (475)
T PLN03226         35 KGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPA  112 (475)
T ss_pred             cCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHH
Confidence            458887788764  5778877765 2  2333332      11 1223332    244556766655544   2455567


Q ss_pred             HHHHHHHhcCCCCEEEEcCC---CChhHHHHH---HHCCCeEE----EeeC-CCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          159 IDLIMRCVLDPGDKIVDCPP---TFTMYEFDA---AVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p---~y~~~~~~~---~~~G~~v~----~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      ...++.++++|||+|+..+.   .|..+....   +..+....    .+.. .+++.+|++++++.+.+.++++|++. .
T Consensus       113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~  191 (475)
T PLN03226        113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-A  191 (475)
T ss_pred             HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-c
Confidence            77788889999999998553   222221111   11122211    3332 35678999999999875678877653 3


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      ++ +|...|.+++.++++. +.++++|+++.-........... .....+++.|++|++  .|.+.|+++++++.+
T Consensus       192 S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~  263 (475)
T PLN03226        192 SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPK  263 (475)
T ss_pred             Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhc
Confidence            33 7899999999999998 99999999986533211111110 113459999999986  355559999887654

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.17  E-value=3.3e-10  Score=101.10  Aligned_cols=204  Identities=18%  Similarity=0.172  Sum_probs=144.9

Q ss_pred             CCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC-----CCC--CCcC-hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANEN-PYGPPPEVREALGQ-LK-FP-----YIY--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~-----~~Y--p~~g-~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      +++++|+.|+. .+...|++.++-++ +. ++     .++  .... ...|...||++.+  .|+.++.+.+..+...++
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f  144 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF  144 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence            45788877643 55667888877554 21 21     111  1122 4578889999998  346666677777888888


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHHHH
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                      .++++|.|.|+-....+.....-.+.+.    .     -..+|+-.++..+.   +.+-|+|+........|.+.|.+++
T Consensus       145 eail~pedAvfSDeLNhASIIdGirLck----r-----y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei  215 (417)
T KOG1359|consen  145 EAILTPEDAVFSDELNHASIIDGIRLCK----R-----YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI  215 (417)
T ss_pred             HHhcChhhhhhccccccchhhhhhHHHh----h-----hccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence            8899999999988888887766555543    1     12345555554432   2466777777889999999999999


Q ss_pred             HHHHhC-CCeEEEccCCcCccCCCC---chhh-hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          241 LKILEM-PILVVLDEAYTEFSGLES---RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       241 ~~l~~~-~~~lIvDeay~~~~~~~~---~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      .+|++. +.++++||++.-+.++..   .... -.+.+.+++.++++|++|  |.-.||..+|..+++.++....+
T Consensus       216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~Rp  289 (417)
T KOG1359|consen  216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRP  289 (417)
T ss_pred             HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCc
Confidence            999998 999999999987664322   1111 124567799999999986  44449999999999999887776

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.17  E-value=1.8e-09  Score=105.56  Aligned_cols=233  Identities=15%  Similarity=0.169  Sum_probs=141.6

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++.+ +...    . .|+.+...+|.+.|++..+-. .+.|+++++++++..
T Consensus        38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e  117 (445)
T PRK08593         38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND  117 (445)
T ss_pred             eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            34677889986652  2343 46888888765 3221    1 134444567888888877533 258999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHH-HCCC-------------eEEEeeCCCCCC-----CC-------HHHHHH
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS-----LN-------VELIAD  212 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~-----~d-------~~~l~~  212 (334)
                      .+++.-.  ....+|+...-.|......+. ..+.             .+..+|..+.+.     .+       ++.+++
T Consensus       118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  197 (445)
T PRK08593        118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE  197 (445)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence            9988422  223567777777765432222 1111             123333211110     11       234444


Q ss_pred             hcc----cCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCC
Q 019868          213 AVE----REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF  281 (334)
Q Consensus       213 ~l~----~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~  281 (334)
                      .+.    .+++.+|++.......|... +.+.+   +++++. ++++|+||+|..|...+...  ...+-.+ .  +-++
T Consensus       198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~p-D--i~t~  274 (445)
T PRK08593        198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITP-D--LMSF  274 (445)
T ss_pred             HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCC-C--Eeee
Confidence            332    24577788776677778875 44444   445554 99999999998875433221  1111111 2  3378


Q ss_pred             chhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +|.++ .|+++|++++++++.+.+....  ..++.++++++++.+.|+
T Consensus       275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~  321 (445)
T PRK08593        275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATID  321 (445)
T ss_pred             ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence            99998 7899999999999988875322  236678888888887774

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.16  E-value=1.9e-09  Score=109.38  Aligned_cols=167  Identities=14%  Similarity=0.209  Sum_probs=123.8

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHCCCeEEEeeCC-CCC-
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF-  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~G~~v~~v~~~-~~~-  203 (334)
                      |..-..+..+..|+.||.+ .-.++++|++.++..++.+++.+||+|++...+|-+..+. ..+.|++++++... +.+ 
T Consensus       172 ~eG~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G  250 (720)
T PRK13578        172 HEGAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFG  250 (720)
T ss_pred             CChHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence            4444778999999999975 4678899999999999999999999999999999987774 77899999998732 223 


Q ss_pred             ---CCCH-----HHHHHhcccC--------C-ceEEEEeCCCCccccCCcHHHHHHHH-hCCCeEEEccCCcCcc-CCCC
Q 019868          204 ---SLNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFS-GLES  264 (334)
Q Consensus       204 ---~~d~-----~~l~~~l~~~--------~-~~~i~l~~p~NPtG~~~~~~~l~~l~-~~~~~lIvDeay~~~~-~~~~  264 (334)
                         .++.     +.+++++++.        + .++++|++|+. .|.+++.+++.+++ +....|++||||.... +.+.
T Consensus       251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~~llvDEAhgah~~F~p~  329 (720)
T PRK13578        251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPM  329 (720)
T ss_pred             CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCCcEEEeCcchhhhccCcc
Confidence               3454     4477777532        1 58999999986 89999999999984 5533999999996543 3221


Q ss_pred             ---ch----hhhcCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868          265 ---RM----EWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAF  297 (334)
Q Consensus       265 ---~~----~~~~~~~~~i~i~S~SK~~gl~G~R~G-~l~~  297 (334)
                         ..    ....+..-++++.|.+|.+  +++--+ ++..
T Consensus       330 ~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv  368 (720)
T PRK13578        330 MADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK  368 (720)
T ss_pred             cccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc
Confidence               11    1111234569999999985  465544 5545

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.15  E-value=2.3e-09  Score=104.84  Aligned_cols=232  Identities=16%  Similarity=0.179  Sum_probs=139.0

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC--CCCCcChHHHHHHHHHhcCCC--CCC-EEEeCCHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL  158 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~lA~~~~~~--~~~-I~~t~G~~~~  158 (334)
                      ..+++.+||+..|.  ..++ .+|++.+++.+ +..   .+  .|+.+...+|-+.|++..+-.  ... ++++++++++
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA  114 (442)
T TIGR00709        35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA  114 (442)
T ss_pred             eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence            45677899997763  3333 46888888775 322   11  134444566777777766421  134 4556889999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCCC--------CH----HHHH
Q 019868          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA  211 (334)
Q Consensus       159 i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~--------d~----~~l~  211 (334)
                      ...+++...  ....+|+...-+|......+.. .|            ..+..++..+.+..        +.    +.++
T Consensus       115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (442)
T TIGR00709       115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE  194 (442)
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            999988432  2236788888878655433332 22            01222332111111        11    1123


Q ss_pred             Hhcc-----cCCceEEEEeCC-CCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868          212 DAVE-----REKPKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR  279 (334)
Q Consensus       212 ~~l~-----~~~~~~i~l~~p-~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~  279 (334)
                      +.+.     ..++.+|++... +|+....++.+.++++.+.    ++++|.||+|.+|...+....  ..+- ..++++ 
T Consensus       195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~-  272 (442)
T TIGR00709       195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVV-  272 (442)
T ss_pred             HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEE-
Confidence            3332     135677777744 4554445788888777654    999999999999865443222  1111 223444 


Q ss_pred             CCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~  327 (334)
                       ++|.++. |+++|+++++++ ++.+..  ....|+.++++++++.++|+
T Consensus       273 -~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~  319 (442)
T TIGR00709       273 -MSKAVGG-GLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALN  319 (442)
T ss_pred             -EcccccC-CcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHH
Confidence             8999985 899999999888 454422  12347789999999999885

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.15  E-value=7.1e-10  Score=105.12  Aligned_cols=158  Identities=13%  Similarity=0.046  Sum_probs=117.4

Q ss_pred             hHHHHHHHHHhcCCC-CCCEEEeCC-HHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCC----CC
Q 019868          131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~-~~~I~~t~G-~~~~i~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~----~~  202 (334)
                      ..++|+.++++++.+ ..+|++++| +|.+++.++..++.+||++++..-+..  .+...++..|+ +..+..+    ..
T Consensus        39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~  117 (349)
T TIGR01364        39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT  117 (349)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence            457788888899973 346888877 999999999999999999887765443  34567778898 6666632    22


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      ..+|+++++.  + +++++|.+++-.+.||...+     ++++. ++++++|.+.+-....-.    +++.+  +++.|.
T Consensus       118 ~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id----~~~~d--~~~~ss  183 (349)
T TIGR01364       118 KIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPID----VSKFG--LIYAGA  183 (349)
T ss_pred             CCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCC----HHHcc--EEEEec
Confidence            3466666552  3 57899999999999999876     55555 899999998864332111    12233  899999


Q ss_pred             chhhcccccchheeEcCHHHHHHH
Q 019868          282 SKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      .|.||.+|  +|+++++++.++++
T Consensus       184 qK~lgP~G--lg~l~~s~~~~~~~  205 (349)
T TIGR01364       184 QKNIGPAG--LTVVIVRKDLLGRA  205 (349)
T ss_pred             ccccCCCc--eEEEEECHHHHhhc
Confidence            99998776  79999999888755

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.15  E-value=1.1e-09  Score=113.79  Aligned_cols=168  Identities=16%  Similarity=0.126  Sum_probs=123.3

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH---HHHHhc-----CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDL---IMRCVL-----DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~---~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~  202 (334)
                      ..++.+.+++..|.+...+....|+. +-..   +++...     ...++|+++.-.|+.....+...|++++.++.+++
T Consensus       532 i~elq~~l~eltGmd~~Sl~p~aGA~-gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~  610 (939)
T TIGR00461       532 IAQLEKWLCSITGFDAISLQPNSGAQ-GEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD  610 (939)
T ss_pred             HHHHHHHHHHHHCCCCcccCCchHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC
Confidence            35788888889998843333333443 2222   223211     12368999999998777778889999999998778


Q ss_pred             CCCCHHHHHHhccc--CCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEE
Q 019868          203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV  277 (334)
Q Consensus       203 ~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~  277 (334)
                      +.+|+++|++++++  .++++|++++|+| +|.+-+ .+++.++++. +.++++|-++.. ...    .....+.+-+++
T Consensus       611 G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~----l~~Pg~~GaDi~  685 (939)
T TIGR00461       611 GNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG----LTSPGDLGADVC  685 (939)
T ss_pred             CCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC----CCCccccCCCEE
Confidence            89999999999974  4789999999999 899877 9999999987 899999999853 221    111234556799


Q ss_pred             EcCCchhhc----ccccchheeEcCHHHHHH
Q 019868          278 LRTFSKRAG----LAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       278 i~S~SK~~g----l~G~R~G~l~~~~~~i~~  304 (334)
                      +.|..|+|+    ..|-.+|++.+.+++...
T Consensus       686 ~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~  716 (939)
T TIGR00461       686 HLNLHKTFCIPHGGGGPGMGPIGVKSHLIPF  716 (939)
T ss_pred             EecCCccCCCCCCCCCCCeEEEEEhhhchhh
Confidence            999999775    346678999987665443

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.14  E-value=2.4e-09  Score=104.53  Aligned_cols=183  Identities=20%  Similarity=0.186  Sum_probs=133.2

Q ss_pred             CCCCCcC--hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcC-----C---CC------EEEEcCCCChhHHHH
Q 019868          124 YIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---GD------KIVDCPPTFTMYEFD  186 (334)
Q Consensus       124 ~~Yp~~g--~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~-----~---gd------~Vl~~~p~y~~~~~~  186 (334)
                      ..||...  ..++-..++++++.+ .-.=.+|+|+++++.+.+.+..+     .   +.      +|+++.-.|.++...
T Consensus        94 ~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Ka  173 (460)
T COG0076          94 DESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKA  173 (460)
T ss_pred             ccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHH
Confidence            4556332  234455556667774 34678899999999877765321     1   11      699999999999999


Q ss_pred             HHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCce-EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC--
Q 019868          187 AAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG--  261 (334)
Q Consensus       187 ~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~-~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~--  261 (334)
                      ++..|.....++... ++.+|++++++++++.... +|+.+.++-+||.+=+.+++.+|++. ++++.+|.||+.|.-  
T Consensus       174 a~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf  253 (460)
T COG0076         174 ARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPF  253 (460)
T ss_pred             HHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecc
Confidence            999999999998655 7899999999999843333 27777889999999999999999998 999999999998762  


Q ss_pred             CCCchh-hhcCCCcEEEEcCCchhhcccccchheeEcCHH-HHHHHHH
Q 019868          262 LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWR  307 (334)
Q Consensus       262 ~~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-~i~~l~~  307 (334)
                      ...... ......-.-+.-+++| ||++-..+||++..++ -......
T Consensus       254 ~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~  300 (460)
T COG0076         254 LEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILI  300 (460)
T ss_pred             cCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhh
Confidence            222222 2222334466779999 6778888999999543 3443433

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.14  E-value=5.3e-09  Score=101.93  Aligned_cols=232  Identities=15%  Similarity=0.136  Sum_probs=146.5

Q ss_pred             CCCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++.+||+..+..  .++ ..|++.+++.+ +...  ..++.+...+|.+.|.+..+ ..+.++++++++++...+++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk  127 (428)
T PRK12389         49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR  127 (428)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence            346778899866633  344 45888888775 3322  23455555677777777665 34689999999999999988


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHHH-HCCCeEEE--------ee--CCCC----CCCCHHHHHHhccc--CCceEEEEe
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDAA-VNGAAVVK--------VP--RKSD----FSLNVELIADAVER--EKPKCIFLT  225 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~--------v~--~~~~----~~~d~~~l~~~l~~--~~~~~i~l~  225 (334)
                      .-.  ....+|+...-.|......+. ..|.....        ++  ...+    ..-|++.+++.+++  +++.+|++.
T Consensus       128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E  207 (428)
T PRK12389        128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE  207 (428)
T ss_pred             HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence            432  223678877777765443322 22211100        00  0000    01268888887752  345677776


Q ss_pred             CCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       226 ~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      -.....|.+.+    .++++++++. ++++|+||++..|...... ....+-.. .+  -+++|.+| .|+.+|.+++++
T Consensus       208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~P-Di--vt~gK~lg-gG~Pi~av~~~~  283 (428)
T PRK12389        208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEP-DL--TALGKIIG-GGLPIGAYGGRK  283 (428)
T ss_pred             CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCC-Ce--eeechhhc-CCCceeEEeEHH
Confidence            55666788776    5666777776 9999999999887221110 11111112 23  37899997 789999999999


Q ss_pred             HHHHHHHH-----hcCCCCCcHHHHHHHHHHhc
Q 019868          300 SIIEYLWR-----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       300 ~~i~~l~~-----~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++.+.+..     ....|+.|+++.+++.+.|+
T Consensus       284 ~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~  316 (428)
T PRK12389        284 DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLE  316 (428)
T ss_pred             HHHhhhccCCCcccccCCccCHHHHHHHHHHHH
Confidence            99887742     12236788988888888775

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.13  E-value=3.3e-09  Score=104.04  Aligned_cols=233  Identities=16%  Similarity=0.179  Sum_probs=144.6

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.++|+..|  ...++ .+|++.+++.+ +..   .. .++.+...+|.+.|++...-..+.++++++++++...+
T Consensus        78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  157 (459)
T PRK11522         78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA  157 (459)
T ss_pred             ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence            3467788998776  44454 56888888775 321   12 23444556777888777654446899999999999999


Q ss_pred             HHHhc----CCC-CEEEEcCCCChhHHHHHHH-CCCeEEE---eeCCCCC----CCCHHHHHHhccc-----CCceEEEE
Q 019868          163 MRCVL----DPG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL  224 (334)
Q Consensus       163 ~~~l~----~~g-d~Vl~~~p~y~~~~~~~~~-~G~~v~~---v~~~~~~----~~d~~~l~~~l~~-----~~~~~i~l  224 (334)
                      ++...    ++| .+|+...-.|......+.. .|-....   .|...++    -.|.+.+++.++.     .++.+|++
T Consensus       158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv  237 (459)
T PRK11522        158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL  237 (459)
T ss_pred             HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence            88432    123 4678777777655433322 2211111   0100000    1267777777642     34557776


Q ss_pred             eCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cchheeE
Q 019868          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LRVGYGA  296 (334)
Q Consensus       225 ~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~  296 (334)
                      .......|...+    .+.++++++. ++++|+||++.+|...+....  ..+- ..+++  +|+|.+| .| +.+|.++
T Consensus       238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lg-gG~~Pigav~  313 (459)
T PRK11522        238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDIL--CLAKALG-GGVMPIGATI  313 (459)
T ss_pred             ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEE--Eechhhh-CCCccceeEE
Confidence            666666788776    5666667766 999999999987753332211  1111 12233  7899987 67 6899999


Q ss_pred             cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhc
Q 019868          297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       297 ~~~~~i~~l~~----~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+++.+.+..    ....|+.++++.+++.+.|+
T Consensus       314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~  348 (459)
T PRK11522        314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATIN  348 (459)
T ss_pred             EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHH
Confidence            99998886642    12235668888888877765

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.13  E-value=1e-09  Score=104.58  Aligned_cols=210  Identities=16%  Similarity=0.093  Sum_probs=138.2

Q ss_pred             CCCCCCCHHHHHHHhc-C-cC----------CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEE-eCCHHHHHHHHHHHhc
Q 019868          104 ENPYGPPPEVREALGQ-L-KF----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCVL  167 (334)
Q Consensus       104 ~~~~~~~~~v~~al~~-~-~~----------~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~-t~G~~~~i~~~~~~l~  167 (334)
                      --|...|+.|++++.. + +.          .++-+..  -..+.++.++++++.+ ..+|++ +.+++.+++.++..++
T Consensus         9 pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~   88 (360)
T PRK05355          9 AGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL   88 (360)
T ss_pred             CCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC
Confidence            3355678999998765 2 11          1111221  2568889999999973 345655 4777888999999999


Q ss_pred             CCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHH-hcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          168 DPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~-~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      .+||++++..-+..  .+...++.+|.. ..+..+. ....+..++++ .++ +++++|.+++-.+.||...+  .+.++
T Consensus        89 ~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~i  164 (360)
T PRK05355         89 GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPDT  164 (360)
T ss_pred             CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--ccccc
Confidence            99998887665443  345677778865 5554332 22344444444 665 57899999999999999984  23333


Q ss_pred             HhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh-c-------------
Q 019868          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K-------------  309 (334)
Q Consensus       244 ~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~-------------  309 (334)
                        .++++|+|.+.+-....-.    +++.+  +++.|..|.||.+|  +|+++++++.++++... .             
T Consensus       165 --~g~l~vVDavss~g~~~id----v~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~  234 (360)
T PRK05355        165 --GDVPLVADMSSDILSRPID----VSKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDS  234 (360)
T ss_pred             --CCCcEEEEcCccccCccCC----HHHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCC
Confidence              4899999999874432111    12223  89999999998666  79999999888775441 1             


Q ss_pred             CCCCCcHHHHHHHHHHhc
Q 019868          310 QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~  327 (334)
                      .++++|.....+..++|+
T Consensus       235 ~~~Tp~~~~i~aL~~aL~  252 (360)
T PRK05355        235 MYNTPPTFAIYLAGLVFK  252 (360)
T ss_pred             ccCCCcHHHHHHHHHHHH
Confidence            124556666555555554

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.12  E-value=1.5e-09  Score=103.44  Aligned_cols=221  Identities=17%  Similarity=0.235  Sum_probs=144.8

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++.++|+..+.  ..++ .+|++.+++++ +..    ...|+.....+|.+.++++.+.  +.+++++++++++..++
T Consensus        21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al   98 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL   98 (364)
T ss_pred             CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence            4577889986653  3444 44778888765 221    2335555567888888888754  58999999999999999


Q ss_pred             HHhc-CCC-CEEEEcCCCChhHHHHHHHC--------CCe-----EEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          164 RCVL-DPG-DKIVDCPPTFTMYEFDAAVN--------GAA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       164 ~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~--------G~~-----v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      +... .+| ++|+...-+|......+...        +..     +..+|    + .|++.+++.+. +++.+|++....
T Consensus        99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~----~-~d~~~l~~~i~-~~~aAvivEpi~  172 (364)
T PRK04013         99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP----F-NDVEAAKEAIT-KETAAVIFEPIQ  172 (364)
T ss_pred             HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec----C-CCHHHHHHHhc-CCcEEEEEcCCc
Confidence            8543 244 88998888887544332221        111     11122    1 26788998886 578898887666


Q ss_pred             CccccCC-c---HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       229 NPtG~~~-~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ...|... +   .++++++++. ++++|+||++.++ ..+.....  .+-.+. ++  +++|.+| .|+.+|.++.++++
T Consensus       173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD-iv--~~gK~lg-gG~P~~a~~~~~~~  247 (364)
T PRK04013        173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD-IV--TMGKGIG-NGVPVSLTLTNFDV  247 (364)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC-EE--Eeccccc-CCceeEEEEecccc
Confidence            5556644 5   4566666766 9999999999987 43332221  122222 32  4699998 58889988887665


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868          302 IEYLWRAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       302 i~~l~~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ..  ......|+.|+++.+++.+.|+
T Consensus       248 ~~--~~~~~T~~gnp~~~aaa~a~l~  271 (364)
T PRK04013        248 ER--GKHGSTFGGNPLACKAVAVTLR  271 (364)
T ss_pred             cC--CCcCCCCCcCHHHHHHHHHHHH
Confidence            21  1223347788988888888765

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.12  E-value=4.2e-09  Score=102.91  Aligned_cols=233  Identities=15%  Similarity=0.159  Sum_probs=141.3

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..++..++|+..|.  ..++ ..|++.+++.+ +...     ..|+.+...+|.+.|++..+-. .+.++++++++++..
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e  129 (441)
T PRK05769         50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE  129 (441)
T ss_pred             eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            44677889987663  3444 45788887765 3211     1233334556777777766422 368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCC-----C--------CHHHHH
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS-----L--------NVELIA  211 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~-----~--------d~~~l~  211 (334)
                      .+++.-.  ....+|+...-+|......+.. .|.             .+..++..+.+.     -        +++.++
T Consensus       130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  209 (441)
T PRK05769        130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE  209 (441)
T ss_pred             HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence            9988432  2336788777777654432222 111             122233211111     0        123355


Q ss_pred             H-hcc----cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868          212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR  279 (334)
Q Consensus       212 ~-~l~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~  279 (334)
                      + .++    ..++.+|++.......|...+    .+++.++++. ++++|+||++.+|...+....  ..+-.+ .++  
T Consensus       210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p-Div--  286 (441)
T PRK05769        210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP-DII--  286 (441)
T ss_pred             HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC-CEE--
Confidence            4 222    245667776655666788777    6666667766 999999999998754332211  111112 233  


Q ss_pred             CCchhhcccccchheeEcCHHHHHHHHHh-cCCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRA-KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~~~~~~~~~~q~aa~~~L~  327 (334)
                      +|+|.++ .|+++|++++++++.+.+... ...++.++++++++.++|+
T Consensus       287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~  334 (441)
T PRK05769        287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLE  334 (441)
T ss_pred             EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            4899998 789999999998887543211 2236678899988888875

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.11  E-value=3.4e-09  Score=103.24  Aligned_cols=232  Identities=14%  Similarity=0.095  Sum_probs=144.0

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..++..+||+..+.  ..++ ..|++.+++++ +...  ..++.+...+|-+.|.+.++...+.+.++++++++...+++
T Consensus        49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik  128 (433)
T PRK00615         49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR  128 (433)
T ss_pred             ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence            34677889997663  3444 46888888765 3222  22344455677888887776444689999999999999988


Q ss_pred             Hhc-CCC-CEEEEcCCCChhHHH---HHHHCCCeE-----EEe--e-CCCC---C-CCCHHHHHHhccc--CCceEEEEe
Q 019868          165 CVL-DPG-DKIVDCPPTFTMYEF---DAAVNGAAV-----VKV--P-RKSD---F-SLNVELIADAVER--EKPKCIFLT  225 (334)
Q Consensus       165 ~l~-~~g-d~Vl~~~p~y~~~~~---~~~~~G~~v-----~~v--~-~~~~---~-~~d~~~l~~~l~~--~~~~~i~l~  225 (334)
                      .-. -.| .+|+...-+|..+..   .+...+...     ..+  + ....   + .-|++.+++.+..  .+..+|++.
T Consensus       129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E  208 (433)
T PRK00615        129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE  208 (433)
T ss_pred             HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence            432 123 577777777765431   111111000     000  0 0000   0 1267888887742  345566666


Q ss_pred             CCCCccccCCcHH----HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcC--CCcEEEEcCCchhhcccccchheeEcC
Q 019868          226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       226 ~p~NPtG~~~~~~----~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      ......|...+.+    +++++++. ++++|+||++.+| ..+.. .....  -...++  +|+|.+| .|+.+|+++++
T Consensus       209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PDi~--~~gK~lg-gG~p~~av~~~  283 (433)
T PRK00615        209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPDIT--VYGKILG-GGLPAAAVVAH  283 (433)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCCeE--EEccccc-CCcceeeeeec
Confidence            5566678877754    77777776 9999999999877 22211 11111  122243  4899987 67889999999


Q ss_pred             HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868          299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       299 ~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++.+....     ..++.++++.+++.+.|+
T Consensus       284 ~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~  317 (433)
T PRK00615        284 KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASIN  317 (433)
T ss_pred             HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHH
Confidence            99998875321     235568888888888775

>PRK12403 putative aminotransferase; Provisional

Probab=99.09  E-value=1.1e-08  Score=100.56  Aligned_cols=233  Identities=15%  Similarity=0.135  Sum_probs=139.4

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-C--CC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+-  ..++ ..|++.+++++ ++. .  ..   ++.....+|.+.|++.++-..+.++++++++++..
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  129 (460)
T PRK12403         50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE  129 (460)
T ss_pred             eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            44677899976552  2243 45888888765 322 1  11   12233567888888887644468999999999999


Q ss_pred             HHHHHhc-------CCCCE-EEEcCCCChhHHH-HHHHCCCe-----------EEEeeCCCC----CCC--------CHH
Q 019868          161 LIMRCVL-------DPGDK-IVDCPPTFTMYEF-DAAVNGAA-----------VVKVPRKSD----FSL--------NVE  208 (334)
Q Consensus       161 ~~~~~l~-------~~gd~-Vl~~~p~y~~~~~-~~~~~G~~-----------v~~v~~~~~----~~~--------d~~  208 (334)
                      .+++...       ++++. |+...-+|..... .....|..           +..+|....    +..        +++
T Consensus       130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (460)
T PRK12403        130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL  209 (460)
T ss_pred             HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            9998653       23333 4444556654332 22222211           222321110    111        134


Q ss_pred             HHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i  278 (334)
                      .+++.+.+   +++.+|++.....-.|.+.+    .+++++|++. ++++|+||++..|...+....  ..+- ..++++
T Consensus       210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~  288 (460)
T PRK12403        210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS  288 (460)
T ss_pred             HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE
Confidence            55555421   34556776655566688776    6777777776 999999999987754332211  1111 123443


Q ss_pred             cCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~  327 (334)
                        ++|.+| .|. .+|.+++.+++.+.+...      ...++.++++.+++.+.|+
T Consensus       289 --~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~  341 (460)
T PRK12403        289 --IAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK  341 (460)
T ss_pred             --Eccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence              899987 674 888888999988877531      2236688888888888774

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.08  E-value=4.1e-10  Score=93.87  Aligned_cols=86  Identities=24%  Similarity=0.499  Sum_probs=66.7

Q ss_pred             CCCCeeecCCCCC-----------------CCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc----C----CCC
Q 019868           93 KPEDIVKIDANEN-----------------PYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G----LES  146 (334)
Q Consensus        93 ~~~~~i~l~~~~~-----------------~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~----~----~~~  146 (334)
                      .+..+|+|+..||                 ++.+++.++++..++   ..|++ .|..+||+++|+++    +    +++
T Consensus        41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p  117 (153)
T PLN02994         41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDA  117 (153)
T ss_pred             CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccch
Confidence            3455777777665                 334444545555442   23644 58999999999987    4    578


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      ++|++|+|+++++..++.++++|||.|++++|+|+
T Consensus       118 d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~  152 (153)
T PLN02994        118 DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA  152 (153)
T ss_pred             hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence            89999999999999999999999999999999996

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.08  E-value=8e-09  Score=102.39  Aligned_cols=235  Identities=15%  Similarity=0.135  Sum_probs=142.4

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDS-GLESDHILVGCGADELI  159 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i  159 (334)
                      ..+++.+||+..+  ...++ ..|++.+++++ +....      .++.....+|.+.|.+.+ +.+.+.++++++++++.
T Consensus        85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~  164 (504)
T PLN02760         85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN  164 (504)
T ss_pred             ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence            4467789998775  33444 46888888775 32211      112222456666666664 33345799999999999


Q ss_pred             HHHHHHhc-------CCC-CEEEEcCCCChhHHHHH-HHCCCe------------EEEeeCCCCCC-------------C
Q 019868          160 DLIMRCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFS-------------L  205 (334)
Q Consensus       160 ~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~G~~------------v~~v~~~~~~~-------------~  205 (334)
                      ..+++...       .++ .+|+..+-.|......+ ...|..            +..++.+..+.             .
T Consensus       165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  244 (504)
T PLN02760        165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR  244 (504)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence            99998552       122 57887777776543322 222221            11222111111             0


Q ss_pred             CHHHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEE
Q 019868          206 NVELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (334)
Q Consensus       206 d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~  277 (334)
                      ..+++++.+.   .+++.+|++.......|.+.+    .+++++|++. ++++|+||++.+|...+.... ...++-..-
T Consensus       245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv~PD  323 (504)
T PLN02760        245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNIKPD  323 (504)
T ss_pred             HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCCCCc
Confidence            1234555553   134567776655666788877    6777777877 999999999988753332221 111111111


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+|+|.+| .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+
T Consensus       324 ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le  382 (504)
T PLN02760        324 LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK  382 (504)
T ss_pred             EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence            456899887 45 5899999999999877531         2236788999888888775

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.08  E-value=1.1e-08  Score=103.82  Aligned_cols=165  Identities=12%  Similarity=0.100  Sum_probs=121.6

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~--  203 (334)
                      |..-..+..+..|+.+|.+ .-.++++|++.++..++.+++.+||+|++...+|-+..+...+.|+++++++.. +.+  
T Consensus       193 ~~G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi  271 (713)
T PRK15399        193 HTGPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI  271 (713)
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence            4444678999999999975 467889999999999999999999999999999998888888899999998732 222  


Q ss_pred             --CCCH-----HHHHHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhCCCeE-EEccCCcCcc-CCC-----Cc
Q 019868          204 --SLNV-----ELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SR  265 (334)
Q Consensus       204 --~~d~-----~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~l-IvDeay~~~~-~~~-----~~  265 (334)
                        +++.     +.+++++++    .++++++|++|+ -.|.+++.+++.+++  ++.+ ++||||..+. +.+     +.
T Consensus       272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sa  348 (713)
T PRK15399        272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSG  348 (713)
T ss_pred             cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcCh
Confidence              3444     888888753    234689999995 499999999998888  4555 6999997543 222     11


Q ss_pred             hhhh-cCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868          266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVG-YGAF  297 (334)
Q Consensus       266 ~~~~-~~~~~~i~i~S~SK~~gl~G~R~G-~l~~  297 (334)
                      +... .....++++.|.+|.+  +|+.=+ ++.+
T Consensus       349 m~~~~~aD~~i~~tQStHKtL--~alTQaS~iHv  380 (713)
T PRK15399        349 MSGERVPGKVIFETQSTHKML--AAFSQASLIHI  380 (713)
T ss_pred             hhCCCCCCeeeeeeeehhccc--cccchheeeee
Confidence            1111 1123356699999985  565544 4444

>PLN02263 serine decarboxylase

Probab=99.07  E-value=6.4e-09  Score=101.12  Aligned_cols=172  Identities=15%  Similarity=-0.012  Sum_probs=126.8

Q ss_pred             HHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHH
Q 019868          133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE  208 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~  208 (334)
                      ++-+.++++++.+++  .=.+|+|+++++-..+.+-.+  +...|++++-+|.++...++.+|++++.||.++++.+|++
T Consensus       137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~  216 (470)
T PLN02263        137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA  216 (470)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence            455556666788654  367899999998887765432  3457889999999999999999999999998888999999


Q ss_pred             HHHHhcccCC--ceEEEEeCCCCccccCCcHHHHHHHHhC-CC-----eEEEccCCcCccCC-CCchhhhc-CCCcEEEE
Q 019868          209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSGL-ESRMEWVK-KHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~~~--~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~-----~lIvDeay~~~~~~-~~~~~~~~-~~~~~i~i  278 (334)
                      +|++++.+..  +-+|+.+-..-++|.+=|.+++.++++. ++     |+.+|.+|+++.-. ......++ ...-.=+.
T Consensus       217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIs  296 (470)
T PLN02263        217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVS  296 (470)
T ss_pred             HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEE
Confidence            9999886433  4456667788999999999999999986 65     99999999876520 00011111 11133456


Q ss_pred             cCCchhhcccccchheeEcCHHHHHHH
Q 019868          279 RTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      -+.+|. +..-..+|.++...+.++.+
T Consensus       297 vD~HK~-l~~P~~cgvll~R~~~~~~~  322 (470)
T PLN02263        297 VSGHKF-VGCPMPCGVQITRMEHINVL  322 (470)
T ss_pred             ECCccc-cCCCcCEEEEEEehhhHhhh
Confidence            678995 45678889998876655433

>PRK07046 aminotransferase; Validated

Probab=99.07  E-value=2e-08  Score=98.36  Aligned_cols=225  Identities=16%  Similarity=0.166  Sum_probs=143.9

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..++..+||+..+.  ..++ ..|.+.+++++ +...  ..++.+...+|.+.|.+..+  .+.+.++++++++...+++
T Consensus        71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr  148 (453)
T PRK07046         71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR  148 (453)
T ss_pred             eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence            44677889986653  3344 45888888775 3322  33355455678888888775  5789999999999999988


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHH--HH-CC----------C------eEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDA--AV-NG----------A------AVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~--~~-~G----------~------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~  223 (334)
                      .-.  ...++|+...-+|..+....  .. .|          .      .+..++    | -|++.+++.+...+..+|+
T Consensus       149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi  223 (453)
T PRK07046        149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL  223 (453)
T ss_pred             HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence            432  23467887777776552211  10 11          0      011111    1 1789999988645667777


Q ss_pred             EeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       224 l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      +.-.....|.+.+.    ++++++++. ++++|+||+.. |... +......+- ..+++  +|+|.+| .|+.+|.+++
T Consensus       224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv-~PDi~--t~gK~lg-gG~Pi~av~g  298 (453)
T PRK07046        224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGL-EPDFL--VVGKPIA-GGVPCAVYGF  298 (453)
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCC-Cccce--eehhhhc-CCCcceeeee
Confidence            76434445666653    666667776 99999999986 3211 111111111 22343  4899998 7899999999


Q ss_pred             CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhc
Q 019868          298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       298 ~~~~i~~l~~~-----------~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++++.+.+...           ...|+.++++.+++.+.|+
T Consensus       299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~  339 (453)
T PRK07046        299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA  339 (453)
T ss_pred             hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH
Confidence            99999887631           1246778888888888765

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.07  E-value=9.3e-09  Score=101.14  Aligned_cols=227  Identities=19%  Similarity=0.159  Sum_probs=141.2

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +.....|  +.....+|-+.|.+.++- .+.+.++++++++...+++
T Consensus        95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk  173 (474)
T PLN02482         95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR  173 (474)
T ss_pred             ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence            34577889986653  2333 45888888775 3332223  333345677777776642 4799999999999999988


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHH--HHH-CCC-----------------eEEEeeCCCCCCCCHHHHHHhccc--CCce
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~G~-----------------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~  220 (334)
                      .-.  ...++|+...-+|..+...  +.. .|.                 .++.+|.     -|++.+++.++.  .++.
T Consensus       174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iA  248 (474)
T PLN02482        174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIA  248 (474)
T ss_pred             HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceE
Confidence            432  2236788777777654321  111 010                 0111111     167888887753  3456


Q ss_pred             EEEEeCCCCccccCCcH-H---HHHHHHhC-CCeEEEccCCcCccCCCCch-hhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          221 CIFLTSPNNPDGSIIND-E---DLLKILEM-PILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~-~---~l~~l~~~-~~~lIvDeay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      +|++.......|.+.+. +   .++++++. ++++|+||++.+|....... ...+- ..++  .+|+|.+| .|+.+|.
T Consensus       249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv-~PDi--~t~gK~lg-gG~Piga  324 (474)
T PLN02482        249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGI-TPDL--TTLGKVIG-GGLPVGA  324 (474)
T ss_pred             EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCC-CCCE--EEecchhh-CCCceEE
Confidence            66666555667877764 3   45666665 99999999998773221111 11111 1223  36899998 7899999


Q ss_pred             eEcCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868          295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       295 l~~~~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++.+.+....     ..|+.++++.+++.+.|+
T Consensus       325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~  362 (474)
T PLN02482        325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK  362 (474)
T ss_pred             EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHH
Confidence            999999998875321     235678888887777664

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.06  E-value=1e-08  Score=104.08  Aligned_cols=161  Identities=12%  Similarity=0.120  Sum_probs=121.4

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~--  203 (334)
                      |..-..+..+..|+.+|.+ .-.++++|++.++..++.+++.+||+|++...+|-+......+.|+++++++.. +.+  
T Consensus       193 ~~G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi  271 (714)
T PRK15400        193 HSGPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (714)
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence            4444678999999999976 467889999999999999999999999999999998888888899999998732 222  


Q ss_pred             --CCC-----HHHHHHhcccC-C---ceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCcc-CCC-----Cch
Q 019868          204 --SLN-----VELIADAVERE-K---PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLE-----SRM  266 (334)
Q Consensus       204 --~~d-----~~~l~~~l~~~-~---~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~-~~~-----~~~  266 (334)
                        .++     .+.+++++++. +   ++.++|++|+ -.|.+++.+++.++++... +++||||..+. +.+     +.+
T Consensus       272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~-ilvDEAwgah~~F~p~~~~~sam  349 (714)
T PRK15400        272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS-IHFDSAWVPYTNFSPIYEGKCGM  349 (714)
T ss_pred             ccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC-EEEEccchhhhccCcccCCcChh
Confidence              234     78888888632 2   3378889995 4999999999999997632 78999997643 222     111


Q ss_pred             hhh-cCCCcEEEEcCCchhhcccccch
Q 019868          267 EWV-KKHDNLIVLRTFSKRAGLAGLRV  292 (334)
Q Consensus       267 ~~~-~~~~~~i~i~S~SK~~gl~G~R~  292 (334)
                      ... ...+.++++.|.+|.+  +|+.=
T Consensus       350 ~~ga~~~~~i~vtQStHKtL--~alTQ  374 (714)
T PRK15400        350 SGGRVEGKVIYETQSTHKLL--AAFSQ  374 (714)
T ss_pred             hcCCCCCCceEEEEchhhcc--cchhH
Confidence            111 1124569999999985  45543

>PRK06062 hypothetical protein; Provisional

Probab=99.05  E-value=1.5e-08  Score=99.36  Aligned_cols=233  Identities=15%  Similarity=0.136  Sum_probs=144.9

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++.+ +...    ..|..+...+|-+.|++...-..+.|+++++++++...+
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  128 (451)
T PRK06062         49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA  128 (451)
T ss_pred             ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence            45678899987663  3344 45788888765 2211    233444456777777777653346899999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-----------eEEEeeCCCCCC------CC-------HHHHHHhcc
Q 019868          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE  215 (334)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-----------~v~~v~~~~~~~------~d-------~~~l~~~l~  215 (334)
                      ++.-.  ....+|+...-.|......+.. .|.           .+..++....+.      -|       ++.+++.++
T Consensus       129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~  208 (451)
T PRK06062        129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE  208 (451)
T ss_pred             HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence            88432  2236788777777654433222 111           112222111111      12       566777774


Q ss_pred             c---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhh
Q 019868          216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRA  285 (334)
Q Consensus       216 ~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~  285 (334)
                      .   .++.+|++.......|.+.+    .++++++++. |+++|+||++..|...+...  ...+- ..+  +-+|+|.+
T Consensus       209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PD--i~t~gK~l  285 (451)
T PRK06062        209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPD--LITFAKGV  285 (451)
T ss_pred             hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCC--eeeechhh
Confidence            2   34567777655566788876    5666667776 99999999999875333221  11111 122  33689998


Q ss_pred             cccc-cchheeEcCHHHHHHHHHh----cCCCCCcHHHHHHHHHHhc
Q 019868          286 GLAG-LRVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       286 gl~G-~R~G~l~~~~~~i~~l~~~----~~~~~~~~~~q~aa~~~L~  327 (334)
                      | .| +.+|.+++.+++.+.+...    ...|+.++++.+++.+.|+
T Consensus       286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~  331 (451)
T PRK06062        286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATIN  331 (451)
T ss_pred             h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            7 67 4899999999998877532    1236778888888888775

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.05  E-value=1.3e-08  Score=99.58  Aligned_cols=168  Identities=18%  Similarity=0.195  Sum_probs=130.8

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC----
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD----  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~----  202 (334)
                      |..-..+..+..|+.+|.+. ..++++|++.++..++.+++.+||.|+++.++|.+.....-..|+.++++....+    
T Consensus        68 p~G~i~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g  146 (557)
T COG1982          68 PEGPIKEAQELAARVFGADH-TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG  146 (557)
T ss_pred             CCccHHHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence            44447899999999999754 5788899999999999999999999999999999888887889999999873222    


Q ss_pred             --CCCCHHHHHHhccc-CCc-eEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEE
Q 019868          203 --FSLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLI  276 (334)
Q Consensus       203 --~~~d~~~l~~~l~~-~~~-~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i  276 (334)
                        .+++.+.+.+++.+ +.. |++++++|.. .|.+++.+++.+.+.. +.|+.+||++...... +...........++
T Consensus       147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~  225 (557)
T COG1982         147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF  225 (557)
T ss_pred             ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence              46889999887653 344 7889888876 8999999999999876 9999999988544321 22222222367789


Q ss_pred             EEcCCchhhcccccchh-eeEcC
Q 019868          277 VLRTFSKRAGLAGLRVG-YGAFP  298 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G-~l~~~  298 (334)
                      ++.|..|..+  ++.-+ ++.+.
T Consensus       226 ~tqS~HK~l~--alSQaS~iHv~  246 (557)
T COG1982         226 VTQSTHKLLA--ALSQASMIHVK  246 (557)
T ss_pred             EEechhhhhh--hhhhhHHHhhC
Confidence            9999999864  55544 45454

>PRK06105 aminotransferase; Provisional

Probab=99.03  E-value=1.4e-08  Score=99.70  Aligned_cols=233  Identities=13%  Similarity=0.090  Sum_probs=140.6

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC---C---CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +...   .   .|+.....+|-+.|++..+-+-+.++++++++++..
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  123 (460)
T PRK06105         44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND  123 (460)
T ss_pred             ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            44678899997663  3444 46888888775 3221   1   233333456777887777544468999999999999


Q ss_pred             HHHHHhc------C-CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC-------------C
Q 019868          161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N  206 (334)
Q Consensus       161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~-------------d  206 (334)
                      .+++...      . +| .+|+...-.|......+.. .|.            .+..++..+.+..             .
T Consensus       124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  203 (460)
T PRK06105        124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL  203 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence            9998532      1 22 5777777777644322211 111            1122221111111             1


Q ss_pred             HHHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868          207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (334)
Q Consensus       207 ~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i  276 (334)
                      ++++++.+.   ..++.+|++.-...-.|...+    .++++++++. ++++|+||++..|...+....  ..+- ..++
T Consensus       204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi  282 (460)
T PRK06105        204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDI  282 (460)
T ss_pred             HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCe
Confidence            355666653   235667777655666677765    4555556655 999999999987753332211  1111 1223


Q ss_pred             EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                        -+++|.++ .| +.+|.+++++++.+.+...         ...++.|+++.+++.+.|+
T Consensus       283 --~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~  340 (460)
T PRK06105        283 --LVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA  340 (460)
T ss_pred             --eeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH
Confidence              36899987 45 5899999999998877532         2346788888888777664

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.02  E-value=1.2e-08  Score=99.07  Aligned_cols=233  Identities=16%  Similarity=0.207  Sum_probs=135.2

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-CCC----CCCcChHHHHHHHHHhcCCC--C-CCEEE-eCCHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PYI----YPDPESRRLRAALAKDSGLE--S-DHILV-GCGADE  157 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~~----Yp~~g~~~lr~~lA~~~~~~--~-~~I~~-t~G~~~  157 (334)
                      ..+++.+||+..+.  ..++ .+|++.+++++ +.. .+.    +......+|-+.|++.....  . +.+++ ++++++
T Consensus        31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  110 (412)
T TIGR02407        31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN  110 (412)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence            44677899987663  3344 56888888876 321 111    11222345666666653211  1 24666 478889


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC---CCHHHHHHhccc---
Q 019868          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS---LNVELIADAVER---  216 (334)
Q Consensus       158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~---~d~~~l~~~l~~---  216 (334)
                      +...+++...  ....+|+...-+|......+.. .|            ..+..+|..+-..   -+++.+++.+.+   
T Consensus       111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  190 (412)
T TIGR02407       111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS  190 (412)
T ss_pred             HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence            9999888432  2336788888777655433222 11            1223333211000   236677777752   


Q ss_pred             --CCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhccc
Q 019868          217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~  288 (334)
                        +++.+|++....++.|. ..+.+.+++|.+.    ++++|+||++.+|...+.....- ..-...++  +++|.++-.
T Consensus       191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~--~~~K~lg~~  268 (412)
T TIGR02407       191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIV--CLSKSISGY  268 (412)
T ss_pred             CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEE--EechhccCC
Confidence              24567777666788898 5678777777654    99999999998775322221110 01111233  589999833


Q ss_pred             ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh
Q 019868          289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL  326 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L  326 (334)
                      |+|+|++++++++ +.+...  ...|+.++++.+++.++|
T Consensus       269 G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l  307 (412)
T TIGR02407       269 GLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAAL  307 (412)
T ss_pred             ccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHH
Confidence            9999999998875 544322  223667777555544444

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.01  E-value=1.1e-08  Score=99.55  Aligned_cols=232  Identities=16%  Similarity=0.200  Sum_probs=136.2

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-CC----CCCCcChHHHHHHHHHhcCCC--CC-CEEE-eCCHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE  157 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~----~Yp~~g~~~lr~~lA~~~~~~--~~-~I~~-t~G~~~  157 (334)
                      ..+++.+||+..|.  ..++ .+|++.+++++ +.. .+    .++.....+|-+.+++.+...  .+ .+++ ++++++
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  114 (425)
T PRK09264         35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN  114 (425)
T ss_pred             eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence            44678899986663  3344 46888888865 321 11    122333456667777654211  22 5656 579999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHC-C---------C---eEEEeeCCCCC---CCCHHHHHHhccc---
Q 019868          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G---------A---AVVKVPRKSDF---SLNVELIADAVER---  216 (334)
Q Consensus       158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G---------~---~v~~v~~~~~~---~~d~~~l~~~l~~---  216 (334)
                      +...+++...  ....+|+...-+|......+... |         .   .+..+|....+   .-|++.+++.+++   
T Consensus       115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~  194 (425)
T PRK09264        115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS  194 (425)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence            9999888432  22367887777776544322211 1         0   23334422110   0267778887752   


Q ss_pred             --CCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcc
Q 019868          217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl  287 (334)
                        +++.+|++.-.....|. +++.+.+++|.+.    ++++|+||++.+|...+....  ..+-.+. +  .+|+|.++.
T Consensus       195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD-i--~t~~K~l~~  271 (425)
T PRK09264        195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD-I--VTLSKSISG  271 (425)
T ss_pred             CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC-E--EEeccccCC
Confidence              23557776655555676 4566666666554    999999999987754332211  1111122 2  367999985


Q ss_pred             cccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh
Q 019868          288 AGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL  326 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L  326 (334)
                      .|+++|++++++++ ..+...  ...++.++++..++.++|
T Consensus       272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l  311 (425)
T PRK09264        272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAAL  311 (425)
T ss_pred             CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHH
Confidence            59999999999886 333221  123667777777766666

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.01  E-value=2.5e-08  Score=89.92  Aligned_cols=199  Identities=16%  Similarity=0.155  Sum_probs=145.9

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CCh
Q 019868          106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFT  181 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y~  181 (334)
                      |-..++.+.+|+..-..++.-|+.  -..++++-+...+..... -.++...++.+.+.++-.++.|||+|++... .|.
T Consensus        25 Psnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg  104 (385)
T KOG2862|consen   25 PSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWG  104 (385)
T ss_pred             CcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHH
Confidence            444567888888764333333443  145666666666654333 3455555667888898889999999987654 554


Q ss_pred             -hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcC
Q 019868          182 -MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       182 -~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                       -+...++.+|++|..++.+.+....++.+.+++.+.++++|++++-...||...+ .+.+.++++. +.++++|.+-+-
T Consensus       105 ~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSl  184 (385)
T KOG2862|consen  105 QRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASL  184 (385)
T ss_pred             HHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhc
Confidence             3567788899999999877778899999999999899999999999999999999 7778888887 999999998764


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhhccc-ccchheeEcCHHHHHHHHHhcC
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~-G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      ...    .-..++++-++....--|.+|.| |  ++-+...+...++++..++
T Consensus       185 ggt----~F~mDewgVDvaytgSQKaL~aP~G--LsiisfS~ka~~~~~~rK~  231 (385)
T KOG2862|consen  185 GGT----EFEMDEWGVDVAYTGSQKALGAPAG--LSIISFSDKALEAIRDRKT  231 (385)
T ss_pred             CCc----cceehhhcccEEEecchhhcCCCCC--cceeecCHHHHHHHhhccC
Confidence            321    11123455567777788999765 5  4557778888888776554

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.00  E-value=2.9e-08  Score=97.03  Aligned_cols=233  Identities=18%  Similarity=0.217  Sum_probs=142.6

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC--CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++++ +..   ..  .++.+...+|.+.|++...-..+.+++++++++++..
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  121 (442)
T PRK13360         42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT  121 (442)
T ss_pred             eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34577889987663  3344 45888888765 321   11  2233334567777777764334689999999999999


Q ss_pred             HHHHhcC-------C-CCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCC-----CCC--------CH
Q 019868          162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV  207 (334)
Q Consensus       162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~-----~~~--------d~  207 (334)
                      +++....       + ..+|+...-.|......+.. .|            ..+..+|...+     +..        .+
T Consensus       122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  201 (442)
T PRK13360        122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA  201 (442)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence            9884321       2 25788888888654332211 11            11222332110     111        14


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~  277 (334)
                      +.+++.+..   .++.+|++.......|...+    .++++++++. ++++|+||++..|...+....  ..+- ..+++
T Consensus       202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv  280 (442)
T PRK13360        202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLL  280 (442)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCcee
Confidence            566666642   34556776666667788877    6777777776 999999999987743222211  1111 12233


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                        +|+|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.++|+
T Consensus       281 --t~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~  337 (442)
T PRK13360        281 --TCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD  337 (442)
T ss_pred             --eeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence              7899886 45 6889999999998876431         1236678888888887764

>PRK06149 hypothetical protein; Provisional

Probab=98.99  E-value=2.4e-08  Score=106.40  Aligned_cols=234  Identities=15%  Similarity=0.099  Sum_probs=142.0

Q ss_pred             CCCCCCeeecCCCCCCCC-CCHHHHHHHhc-Cc---CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      ..+++.++|+..|...++ ..|++.+++.+ +.   ...+|..+...+|.+.|++.+.-..+.++++++++++...+++.
T Consensus       581 D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl  660 (972)
T PRK06149        581 DMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRL  660 (972)
T ss_pred             eCCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHH
Confidence            345778999987765666 67888888765 22   22223333456788888888753346899999999999999883


Q ss_pred             hc--CCCCEEEEcCCCChhHHHHHH-HCC-----C--------eEEEeeCCCC----CC-CC-----HHHHHHhcc----
Q 019868          166 VL--DPGDKIVDCPPTFTMYEFDAA-VNG-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE----  215 (334)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~-~~G-----~--------~v~~v~~~~~----~~-~d-----~~~l~~~l~----  215 (334)
                      -.  ....+|+..+-.|......+. ..+     .        .+..++..+.    |. .|     .+++++.++    
T Consensus       661 Ar~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  740 (972)
T PRK06149        661 AWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA  740 (972)
T ss_pred             HHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence            21  223567777766764332211 100     0        1222321111    11 11     233333332    


Q ss_pred             -cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCC--CcEEEEcCCchhhcc
Q 019868          216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKH--DNLIVLRTFSKRAGL  287 (334)
Q Consensus       216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~--~~~i~i~S~SK~~gl  287 (334)
                       ..++.+|++.......|.+.+    .+++.++++. |+++|+||++.+|...+.........  ...++  +++|.+| 
T Consensus       741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg-  817 (972)
T PRK06149        741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMG-  817 (972)
T ss_pred             cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eeccccc-
Confidence             134556666544555677666    5566666666 99999999998775433321111111  12233  7899998 


Q ss_pred             cccchheeEcCHHHHHHHHHh---cCCCCCcHHHHHHHHHHhc
Q 019868          288 AGLRVGYGAFPLSIIEYLWRA---KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~---~~~~~~~~~~q~aa~~~L~  327 (334)
                      .|..+|.+++.+++.+.+...   ...++.|+++.+++.+.|+
T Consensus       818 ~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~  860 (972)
T PRK06149        818 NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLD  860 (972)
T ss_pred             CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence            789999999999998877531   2235678888888888775

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=98.98  E-value=2.4e-08  Score=95.17  Aligned_cols=184  Identities=13%  Similarity=0.046  Sum_probs=123.2

Q ss_pred             CCCCCHHHHHHHhcCc-----CCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEe-CCHHHHHHHHHHHhcCCCCEEEEc
Q 019868          106 PYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVDC  176 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~-----~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t-~G~~~~i~~~~~~l~~~gd~Vl~~  176 (334)
                      |...++++.+++....     ..++-+..  -..+.|+.++++++++. .+|+++ .++|.+++.++..++.+ +.+++.
T Consensus        11 P~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~   89 (361)
T TIGR01366        11 PSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLS   89 (361)
T ss_pred             CcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEe
Confidence            4556788999986421     11222332  26789999999999854 478886 55999999999988743 344444


Q ss_pred             CCCCh-hHHHHHHH--CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEE
Q 019868          177 PPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (334)
Q Consensus       177 ~p~y~-~~~~~~~~--~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIv  252 (334)
                      .-.|. .+...+..  .+.++..++.+.+..++.     .+. +++++|.+++-.|.||...|.+++   ++. ++++|+
T Consensus        90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iV  160 (361)
T TIGR01366        90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVI  160 (361)
T ss_pred             cCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEEE
Confidence            45564 34445554  233566665433333332     233 689999999999999999998876   454 999999


Q ss_pred             ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      |.+.+-....-. ..   .  -.+++.|..|.+|.+| .+++++++++.++++.
T Consensus       161 Davqs~g~~~id-v~---~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~  207 (361)
T TIGR01366       161 DATSGAGGLPVD-IA---E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIE  207 (361)
T ss_pred             EcCccccCCCCC-HH---H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhh
Confidence            999874332111 11   1  3489999999998774 2555667888876655

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.96  E-value=4.9e-08  Score=102.91  Aligned_cols=168  Identities=15%  Similarity=0.081  Sum_probs=119.4

Q ss_pred             HHHHHHHHHhcCCCCCCEEEeC-CHHHHHHH---HHHHh-cCCCC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868          132 RRLRAALAKDSGLESDHILVGC-GADELIDL---IMRCV-LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD  202 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I~~t~-G~~~~i~~---~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~  202 (334)
                      .++.+.+++++|.+  ++.+.. |++++...   +++.+ ..+|+    +|++++..|+.....+...|++++.++.+.+
T Consensus       545 ~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~  622 (954)
T PRK05367        545 DQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN  622 (954)
T ss_pred             HHHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC
Confidence            46778888888975  565655 44443322   23322 24565    6999999998888888899999999997777


Q ss_pred             CCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          203 FSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                      +.+|+++|++++++.  ++.+|++++|++-.+...+.+++.++++. ++++++|.++......-.   .....+-++++.
T Consensus       623 G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~  699 (954)
T PRK05367        623 GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHL  699 (954)
T ss_pred             CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEe
Confidence            899999999999642  56788888998764445789999999987 999999999953211101   112334568999


Q ss_pred             CCchhhcc----cccchheeEcCHHHHHH
Q 019868          280 TFSKRAGL----AGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       280 S~SK~~gl----~G~R~G~l~~~~~~i~~  304 (334)
                      +..|.|+.    .|-.+|++.+.+.+...
T Consensus       700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~  728 (954)
T PRK05367        700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPF  728 (954)
T ss_pred             cCcccCCCCcCCCCCceEEEeeccccccc
Confidence            99998753    35557888876554433

>PRK07678 aminotransferase; Validated

Probab=98.94  E-value=4.7e-08  Score=95.85  Aligned_cols=232  Identities=16%  Similarity=0.136  Sum_probs=140.8

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..++..+||+..+.  ..++ ..|++.+++.+ +...    ..|+.....+|.+.|++.++. .+.++++++++++...+
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A  121 (451)
T PRK07678         43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA  121 (451)
T ss_pred             eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence            34677889987653  3344 45788887765 3211    223444456788888887754 35899999999999998


Q ss_pred             HHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC---------C---HHH
Q 019868          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL  209 (334)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~---------d---~~~  209 (334)
                      ++.-..       +| .+|+...-.|......+.. .|.            .+..++..+.+..         |   ++.
T Consensus       122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (451)
T PRK07678        122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE  201 (451)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence            884321       23 5788877777654433222 111            1222321111111         1   223


Q ss_pred             HHHhcc---cCCceEEEEeCCCCccccCCc-H---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868          210 IADAVE---REKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR  279 (334)
Q Consensus       210 l~~~l~---~~~~~~i~l~~p~NPtG~~~~-~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~  279 (334)
                      +++.++   .+++.+|++.-...-.|.+.+ .   ++++++++. ++++|+||++.+|...+....  ..+- ..+++  
T Consensus       202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDiv--  278 (451)
T PRK07678        202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDII--  278 (451)
T ss_pred             HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEE--
Confidence            455553   245677777644444677654 4   444555555 999999999988854332211  1111 12243  


Q ss_pred             CCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +++|.+| .| +.+|.+++.+++.+.+..        ....|+.|+++.+++.+.|+
T Consensus       279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~  334 (451)
T PRK07678        279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE  334 (451)
T ss_pred             Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence            5899987 56 689999999999887753        22347788999888888875

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=98.94  E-value=5.8e-08  Score=95.01  Aligned_cols=233  Identities=19%  Similarity=0.226  Sum_probs=142.7

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++++ +..   .  ..|+.+...+|.+.|++..+-..+.|+++++++++...
T Consensus        45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~  124 (445)
T PRK09221         45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT  124 (445)
T ss_pred             eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34677899997662  3344 45888877765 322   1  12333345567777777765334689999999999999


Q ss_pred             HHHHhc------C-C-CCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCCC-----CCCC--------CH
Q 019868          162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-----DFSL--------NV  207 (334)
Q Consensus       162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~~-----~~~~--------d~  207 (334)
                      +++...      . + ..+|+...-.|......+... |            ..+..+|...     .+..        .+
T Consensus       125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (445)
T PRK09221        125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA  204 (445)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence            888432      1 1 257888887776543222111 1            0122222111     0111        13


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~  277 (334)
                      +.+++.++.   +++.+|++.......|...+    .++++++++. ++++|+||++..|...+....  ..+- ...+ 
T Consensus       205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi-  282 (445)
T PRK09221        205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDI-  282 (445)
T ss_pred             HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCE-
Confidence            466666642   34667777766677888887    6777778876 999999999987753222211  1111 1123 


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                       -+++|.++ .| +.+|.+++++++.+.+...         ...++.++++.+++.+.|+
T Consensus       283 -~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~  340 (445)
T PRK09221        283 -ITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD  340 (445)
T ss_pred             -EEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH
Confidence             36899886 45 6789999999998876431         1236678888888777764

>PRK07482 hypothetical protein; Provisional

Probab=98.93  E-value=7.7e-08  Score=94.58  Aligned_cols=233  Identities=15%  Similarity=0.109  Sum_probs=141.3

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+-  ..++ .+|++.+++++ ++...      .|+.....+|-+.|++...-+-+.+++++++++++.
T Consensus        46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve  125 (461)
T PRK07482         46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE  125 (461)
T ss_pred             ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            45678899987763  2333 46888888775 32211      233333456777777766434568999999999999


Q ss_pred             HHHHHhc------C-C-CCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC-------------CC
Q 019868          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN  206 (334)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~-------------~d  206 (334)
                      .+++...      . + ..+|+...-.|......+.. .|            ..+..++....+.             -+
T Consensus       126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (461)
T PRK07482        126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC  205 (461)
T ss_pred             HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence            9998542      1 2 25788777777654332221 11            0112222111000             03


Q ss_pred             HHHHHHhccc---CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868          207 VELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (334)
Q Consensus       207 ~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i  276 (334)
                      ++.+++.+..   +++.+|++.-...-.|... +.+.+++|   ++. ++++|.||++.+|...+....  ..+- ..++
T Consensus       206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDi  284 (461)
T PRK07482        206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDL  284 (461)
T ss_pred             HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCE
Confidence            5677776631   3466777764444457664 55555554   444 999999999998854332211  1111 2234


Q ss_pred             EEcCCchhhccccc-chheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++  ++|.++ .|. .+|.+++.+++.+.+..         ....|+.|+++.+++.+.|+
T Consensus       285 v~--~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  342 (461)
T PRK07482        285 IT--VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD  342 (461)
T ss_pred             EE--Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence            44  799886 674 88999999998887652         12246789999988888875

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=98.90  E-value=7.6e-08  Score=92.80  Aligned_cols=233  Identities=19%  Similarity=0.206  Sum_probs=149.6

Q ss_pred             CCCCCCeeecCCCCC--CCC-CCHHHHHHHhc-C---c-CCCCC-CCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-L---K-FPYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~---~-~~~~Y-p~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+|||..+.+  .++ .+|.+++|+++ +   . ....| +.....++-|.|.+...- ..+.++++++++++.+
T Consensus        52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E  131 (447)
T COG0160          52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE  131 (447)
T ss_pred             eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence            456788999988544  343 57899998876 2   2 22334 223456777777777765 4678999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHH-HHHCC-------------CeEEEeeCCCC----CCC--------CHHHHHH
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFD-AAVNG-------------AAVVKVPRKSD----FSL--------NVELIAD  212 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~-~~~~G-------------~~v~~v~~~~~----~~~--------d~~~l~~  212 (334)
                      .+++.-.  .....|+...-.|...... ....|             ..++.+|..+.    |..        ..+.+++
T Consensus       132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~  211 (447)
T COG0160         132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER  211 (447)
T ss_pred             HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence            9998432  3346777777777533222 22211             12455552211    111        2344454


Q ss_pred             hccc-----CCceEEEEeCCCCccccCCcHH-HH---HHHHhC-CCeEEEccCCcCccCCCCchhhhcCC--CcEEEEcC
Q 019868          213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKH--DNLIVLRT  280 (334)
Q Consensus       213 ~l~~-----~~~~~i~l~~p~NPtG~~~~~~-~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~--~~~i~i~S  280 (334)
                      .+..     .++.++++.....-.|.+.+.+ .+   +++++. ++++|+||++.+|...+..+.. ...  ..+++  +
T Consensus       212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~-E~~gv~PDiv--t  288 (447)
T COG0160         212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAF-EHFGVEPDIV--T  288 (447)
T ss_pred             HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhh-hhcCCCCCEE--E
Confidence            3322     3466888877788888877544 33   344554 9999999999999866643332 221  22344  5


Q ss_pred             CchhhcccccchheeEcCHHHHHHHH-HhcCCCCCcHHHHHHHHHHhc
Q 019868          281 FSKRAGLAGLRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       281 ~SK~~gl~G~R~G~l~~~~~~i~~l~-~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++|.+| .|+.+|.++..+++.+..- .....|.-|+++.+++.+.|+
T Consensus       289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~  335 (447)
T COG0160         289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLD  335 (447)
T ss_pred             eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHH
Confidence            899998 5999999999999877322 222337889999999999887

>PRK06148 hypothetical protein; Provisional

Probab=98.89  E-value=6.3e-08  Score=103.44  Aligned_cols=236  Identities=13%  Similarity=0.050  Sum_probs=142.3

Q ss_pred             CCCCCCeeecCCCCCCCC-CCHHHHHHHhc-Cc---CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      ..+++.++|+..|...++ ..|++.+++.+ +.   ....|..+...+|-+.|++.+.-.-+.++++++++++...+++.
T Consensus       620 D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~Alkl  699 (1013)
T PRK06148        620 DNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRL  699 (1013)
T ss_pred             ECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence            346778899977755555 56888888765 32   22345555566788888887753346899999999999999884


Q ss_pred             hc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCC----CCCC-C-------HHHHHHhcc---
Q 019868          166 VL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS----DFSL-N-------VELIADAVE---  215 (334)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~----~~~~-d-------~~~l~~~l~---  215 (334)
                      -.  ....+|+...-+|......+.. .|            ..+..++..+    .|.. |       .+.+++.++   
T Consensus       700 Ar~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  779 (1013)
T PRK06148        700 ARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA  779 (1013)
T ss_pred             HHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence            32  2336788777777644322111 11            0111111110    1111 1       133444432   


Q ss_pred             --cCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc
Q 019868          216 --REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~  288 (334)
                        ..++.+|++.....--|.+. +.+.+   +++++. |+++|.||++.+|...+.........+-.-=+-+++|.+| .
T Consensus       780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lg-g  858 (1013)
T PRK06148        780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIG-N  858 (1013)
T ss_pred             ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeeccccc-C
Confidence              13466777664444456655 44444   445555 9999999999888643321111111111111235799998 7


Q ss_pred             ccchheeEcCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhc
Q 019868          289 GLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~---~~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+.+|.+++.+++.+.+..   ....|+.|+++.+++.+.|+
T Consensus       859 G~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~  900 (1013)
T PRK06148        859 GHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLD  900 (1013)
T ss_pred             CcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence            8999999999999887753   22346788998888888765

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=98.89  E-value=1.1e-07  Score=92.57  Aligned_cols=233  Identities=15%  Similarity=0.153  Sum_probs=138.4

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+.  ..++ .+|++.+++++ +....     .+..+...+|.+.|++..+...+.++++++++++...
T Consensus        39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~  118 (428)
T PRK07986         39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV  118 (428)
T ss_pred             eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            34677889987652  3343 45888888765 32211     1233334567777777765444689999999999999


Q ss_pred             HHHHhc-------CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CC-----CCCHHHHHHhc
Q 019868          162 IMRCVL-------DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DF-----SLNVELIADAV  214 (334)
Q Consensus       162 ~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~-----~~d~~~l~~~l  214 (334)
                      +++...       ....+|+...-+|......+.. .|-             .+..++... .+     .-|++++++.+
T Consensus       119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l  198 (428)
T PRK07986        119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM  198 (428)
T ss_pred             HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence            888432       1236788888888653322221 111             112222111 01     12566777777


Q ss_pred             cc--CCceEEEEeCC-CCccccCC-cHH---HHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchh
Q 019868          215 ER--EKPKCIFLTSP-NNPDGSII-NDE---DLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~~~-~~~---~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~  284 (334)
                      +.  ++..+|++... ..-.|... +.+   +++++++. ++++|+||++.+|...+....  ..+- ..+++  +|+|.
T Consensus       199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~--t~gK~  275 (428)
T PRK07986        199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDIL--CLGKA  275 (428)
T ss_pred             HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEE--Eechh
Confidence            42  24556666542 44445533 444   44555555 999999999977743332211  1111 12244  48999


Q ss_pred             hcccc-cchheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868          285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       285 ~gl~G-~R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++ .| +.+|.+++++++.+.+...       ...|+.++++.+++.+.|+
T Consensus       276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~  325 (428)
T PRK07986        276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLS  325 (428)
T ss_pred             hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence            87 67 5788888899999888642       2346778888888877765

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=98.89  E-value=1.2e-07  Score=90.08  Aligned_cols=228  Identities=20%  Similarity=0.166  Sum_probs=151.4

Q ss_pred             hCCCCCCeeecCCCCCCC--C-CCHHHHHHHhc-CcCCCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           90 LGRKPEDIVKIDANENPY--G-PPPEVREALGQ-LKFPYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      +..+++.+||+..+.-+.  + .+|.|.+|+++ +..+..|.  ....-++-+.+.+.++. .|.|-+++++||+...++
T Consensus        48 ~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAi  126 (432)
T COG0001          48 TDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAI  126 (432)
T ss_pred             EeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHH
Confidence            345678889987765443  3 46789999886 55666674  33345677777777763 378999999999999888


Q ss_pred             HHhc--CCCCEEEEcCCCChhHHHHHHH-CC--Ce-----------------EEEeeCCCCCCCCHHHHHHhcccC--Cc
Q 019868          164 RCVL--DPGDKIVDCPPTFTMYEFDAAV-NG--AA-----------------VVKVPRKSDFSLNVELIADAVERE--KP  219 (334)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G--~~-----------------v~~v~~~~~~~~d~~~l~~~l~~~--~~  219 (334)
                      +.-.  ...|+|+..+-+|..+...+.. .|  ..                 ++.+|.  +   |++.+++++++.  +.
T Consensus       127 RlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y--N---D~~al~~~~~~~g~~I  201 (432)
T COG0001         127 RLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY--N---DLEALEEAFEEYGDDI  201 (432)
T ss_pred             HHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC--C---CHHHHHHHHHHcCCcE
Confidence            8321  3448898888888755443332 22  11                 122221  1   789999988753  56


Q ss_pred             eEEEEe-CCCCccccCCcHH----HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchh
Q 019868          220 KCIFLT-SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (334)
Q Consensus       220 ~~i~l~-~p~NPtG~~~~~~----~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G  293 (334)
                      .+|++. -..| -|.+.+.+    .+++|++. +.++|.||+...|.....-...  .++-.--+.+|.|..| .|+.+|
T Consensus       202 AaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~--~~gi~PDlttlGKiIG-GGlP~g  277 (432)
T COG0001         202 AAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG--YYGVEPDLTTLGKIIG-GGLPIG  277 (432)
T ss_pred             EEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc--ccCcCcchhhhhhhhc-CCccee
Confidence            677776 3455 57766643    34555555 9999999999877632111111  1111122456999998 899999


Q ss_pred             eeEcCHHHHHHHHHhcCC-----CCCcHHHHHHHHHHhc
Q 019868          294 YGAFPLSIIEYLWRAKQP-----YNVSVAAEVAACAALQ  327 (334)
Q Consensus       294 ~l~~~~~~i~~l~~~~~~-----~~~~~~~q~aa~~~L~  327 (334)
                      .+-+..++.+.+......     ++-|+++.+|+.+.|+
T Consensus       278 a~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~  316 (432)
T COG0001         278 AFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLE  316 (432)
T ss_pred             eeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHH
Confidence            999999999977655432     5678888888887765

>PRK07036 hypothetical protein; Provisional

Probab=98.88  E-value=7.8e-08  Score=94.65  Aligned_cols=233  Identities=17%  Similarity=0.182  Sum_probs=140.5

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CCC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++++ +..   ...   ++.....+|-+.|++...-.-+.+++++++++++.
T Consensus        47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve  126 (466)
T PRK07036         47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD  126 (466)
T ss_pred             ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence            34677889987663  3343 45888888765 322   111   23333456777777766433468999999999999


Q ss_pred             HHHHHhc------C-C-CCEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCCC----CCCC--------H
Q 019868          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSD----FSLN--------V  207 (334)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~----~~~d--------~  207 (334)
                      .+++...      . + ..+|+...-+|......+... |-            .+..++....    ++.+        +
T Consensus       127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  206 (466)
T PRK07036        127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV  206 (466)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence            9988431      1 2 257887777776544332221 11            1222332110    1111        2


Q ss_pred             HHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh---hcCCCcEE
Q 019868          208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW---VKKHDNLI  276 (334)
Q Consensus       208 ~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~---~~~~~~~i  276 (334)
                      +.+++.+.   .+++.+|++.-...-.|...+    .+.++++++. ++++|+||++..|...+.....   .+- ..++
T Consensus       207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDi  285 (466)
T PRK07036        207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDI  285 (466)
T ss_pred             HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCE
Confidence            33444442   245667777755666687765    4556666766 9999999999887543322111   111 1223


Q ss_pred             EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +  +++|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+
T Consensus       286 v--t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le  343 (466)
T PRK07036        286 I--TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE  343 (466)
T ss_pred             E--EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH
Confidence            3  5799887 67 4899999999998877531         1246778999888888775

>PRK05965 hypothetical protein; Provisional

Probab=98.87  E-value=1.6e-07  Score=92.25  Aligned_cols=234  Identities=15%  Similarity=0.153  Sum_probs=141.8

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC---C---CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+-  ..++ ..|++.+++.+ +...   .   .|+.....+|-+.|++...-+.+.++++++++++..
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve  121 (459)
T PRK05965         42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD  121 (459)
T ss_pred             ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence            44677899986652  3333 45888888775 3221   1   233333456777777776434568999999999999


Q ss_pred             HHHHHhc------C-C-CCEEEEcCCCChhHHHHHH-HCCC------------eEEEeeCCC----CCCCC--------H
Q 019868          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKS----DFSLN--------V  207 (334)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~-~~G~------------~v~~v~~~~----~~~~d--------~  207 (334)
                      .+++...      + + ..+|+...-+|......+. ..|.            .+..++...    .+.-|        +
T Consensus       122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (459)
T PRK05965        122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV  201 (459)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence            9988532      1 2 2578888888865433221 1111            112222111    01123        2


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVL  278 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i  278 (334)
                      +.+++.+..   +++.+|++.-.....|... +.+.++++   ++. ++++|.||++.+|...+.....- ..-..++++
T Consensus       202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~  281 (459)
T PRK05965        202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT  281 (459)
T ss_pred             HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence            566666642   3567777775555567755 55555444   444 99999999999886433221110 011223443


Q ss_pred             cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~  327 (334)
                        ++|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+
T Consensus       282 --~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  337 (459)
T PRK05965        282 --VAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR  337 (459)
T ss_pred             --echhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence              799987 68 489999999999887742         12246788888888887764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.87  E-value=1.3e-07  Score=92.66  Aligned_cols=233  Identities=13%  Similarity=0.107  Sum_probs=142.3

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..+  ...++ ..|++.+++.+ +..   .  ..|+.....+|-+.|++..+..-+.++++++++++...
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~  129 (453)
T PRK06943         50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI  129 (453)
T ss_pred             eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence            3467788998766  33444 45888888765 321   1  12344445677777777765433689999999999999


Q ss_pred             HHHHhc-------CC-CCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCC------------CCHH
Q 019868          162 IMRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVE  208 (334)
Q Consensus       162 ~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~------------~d~~  208 (334)
                      +++.-.       .+ ..+|+...-+|......+.. .|-            .+..++..+...            -+++
T Consensus       130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (453)
T PRK06943        130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA  209 (453)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence            988541       12 36788888888654322211 110            122232111100            1246


Q ss_pred             HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i  278 (334)
                      .+++.+..  +++.+|++.- ...-.|... +.+.++++   ++. ++++|.||++.+|...+....  ..+-.+ ++++
T Consensus       210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P-Divt  288 (453)
T PRK06943        210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP-DFLC  288 (453)
T ss_pred             HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC-CeEe
Confidence            66666642  4566777764 255567754 56555555   444 999999999998854332221  111112 2333


Q ss_pred             cCCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~  327 (334)
                        ++|.++ .| +.+|.+++++++.+.+..        ....|+.|+++.+++.+.|+
T Consensus       289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  343 (453)
T PRK06943        289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD  343 (453)
T ss_pred             --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH
Confidence              699988 68 589999999999887753        22246778888888888774

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.86  E-value=3e-08  Score=93.41  Aligned_cols=193  Identities=19%  Similarity=0.202  Sum_probs=139.3

Q ss_pred             CCCHHHHHHHhcCcCCC-----CCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          108 GPPPEVREALGQLKFPY-----IYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       108 ~~~~~v~~al~~~~~~~-----~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      +..+.+.+++.......     .-... ...++.+.+|+++|+ ++.+++..| -....+.+-+++.||.-|+-..-.|.
T Consensus       155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHa  232 (519)
T KOG1357|consen  155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHA  232 (519)
T ss_pred             cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccch
Confidence            34567777776532211     11222 256899999999996 467888777 45566677788999999999999999


Q ss_pred             hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCc-----eEEEEe-CCCCccccCCcHHHHHHHHhC-CC
Q 019868          182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNNPDGSIINDEDLLKILEM-PI  248 (334)
Q Consensus       182 ~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~-----~~i~l~-~p~NPtG~~~~~~~l~~l~~~-~~  248 (334)
                      ....-++..|++++.+..+     |..+||+.+++      +++     |++++. .-...-|.+....++.++.+. ..
T Consensus       233 Si~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyka  307 (519)
T KOG1357|consen  233 SLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKA  307 (519)
T ss_pred             heeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccE
Confidence            9999999999999888753     34555554431      221     333333 667789999999999999988 99


Q ss_pred             eEEEccCCcCccCCCC---c--hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          249 LVVLDEAYTEFSGLES---R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       249 ~lIvDeay~~~~~~~~---~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      +++.||+++-.+.+..   .  ....+..+.+|..++|.|.||.+|   ||+.+++++++.++....
T Consensus       308 yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~  371 (519)
T KOG1357|consen  308 YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSP  371 (519)
T ss_pred             EEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCC
Confidence            9999999986553211   1  112234567899999999999888   999999999998875544

>PRK07480 putative aminotransferase; Validated

Probab=98.86  E-value=9.4e-08  Score=93.82  Aligned_cols=233  Identities=18%  Similarity=0.193  Sum_probs=139.6

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC------CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP------YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~------~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++++ +...      ..|+.+...+|.+.|++.++-.-+.++++++++++..
T Consensus        46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  125 (456)
T PRK07480         46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND  125 (456)
T ss_pred             eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            44677889987652  3344 45888888765 3221      1234444567888888877544568999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCCe------------EEEeeCCCCC----CCC--------H
Q 019868          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDF----SLN--------V  207 (334)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~~------------v~~v~~~~~~----~~d--------~  207 (334)
                      .+++....       +| .+|+...-+|......+.. .|..            +..++....+    ..+        +
T Consensus       126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (456)
T PRK07480        126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA  205 (456)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence            99884321       23 4677777777643322211 1111            1112211100    011        2


Q ss_pred             HHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868          208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~  277 (334)
                      +.+++.+.   ..++.+|++.-...-.|...+    .+.+++|++. ++++|+||++.+|...+....  ..+- ..++ 
T Consensus       206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDi-  283 (456)
T PRK07480        206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDL-  283 (456)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCe-
Confidence            55554442   135667777655555677665    3455556665 999999999988853332211  1111 1223 


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHH------hcCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~------~~~~~~~~~~~q~aa~~~L~  327 (334)
                       -+|+|.++ .| +.+|.+++++++.+.+..      ....|+.|+++.+++.+.|+
T Consensus       284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~  338 (456)
T PRK07480        284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR  338 (456)
T ss_pred             -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence             35899887 57 489999999999887731      22347789999999888875

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=98.85  E-value=2.1e-07  Score=91.46  Aligned_cols=233  Identities=16%  Similarity=0.187  Sum_probs=139.2

Q ss_pred             CCCCCCeeecCCC-CCCCC-CCHHHHHHHhc-CcC-C---CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~~-~---~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ..++..+||+..+ ...++ ..|++.+++.+ +.. .   ..|+.....+|.+.|++.++-..+.+++++++++++..++
T Consensus        68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al  147 (459)
T PRK06082         68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL  147 (459)
T ss_pred             ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence            3467788998633 23355 66888888765 321 1   2344445667888888887633468999999999999998


Q ss_pred             HHhc--CCCCEEEEcCCCChhHHHHHH-HCCC------------eEEEeeCCCC----CC-CC------HHHHHHhccc-
Q 019868          164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSD----FS-LN------VELIADAVER-  216 (334)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~------------~v~~v~~~~~----~~-~d------~~~l~~~l~~-  216 (334)
                      +...  ....+|+...-.|......+. ..|.            .+..+|....    +. .|      ++.+++.+++ 
T Consensus       148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  227 (459)
T PRK06082        148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE  227 (459)
T ss_pred             HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence            8432  223678777777765433222 2221            1122221110    10 11      3456666642 


Q ss_pred             CCceEEEEeCCCCccccCCcH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-
Q 019868          217 EKPKCIFLTSPNNPDGSIIND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-  289 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-  289 (334)
                      .++.+|++.-..+..+...+.   ++++++++. ++++|+||++.+|...+....  ..+- ..++++  ++|.+| .| 
T Consensus       228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~-gG~  303 (459)
T PRK06082        228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLG-GGL  303 (459)
T ss_pred             CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--eccccc-CCC
Confidence            345566665445544445664   455555655 999999999988754332211  1111 122443  899987 56 


Q ss_pred             cchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868          290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       290 ~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+|.+++.+++.+....  ....++.++++.+++.+.|+
T Consensus       304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  343 (459)
T PRK06082        304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIE  343 (459)
T ss_pred             CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            589999998887654321  11346788888888888775

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.85  E-value=2.9e-07  Score=89.75  Aligned_cols=233  Identities=15%  Similarity=0.165  Sum_probs=140.0

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C-C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P-Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~-~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+  ...++ ..|++.+++++ +..   . . .|..+...+|.+.|++..+...+.++++++++++...
T Consensus        40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~  119 (429)
T PRK06173         40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV  119 (429)
T ss_pred             cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence            3467788998665  23333 35788877765 221   1 1 2344445678888887765445689999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CCC-----CCHHHHHHh
Q 019868          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DFS-----LNVELIADA  213 (334)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~~-----~d~~~l~~~  213 (334)
                      +++....       +| .+|+...-+|......+.. .|-             .+..+|... .+.     -+++.+++.
T Consensus       120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~  199 (429)
T PRK06173        120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL  199 (429)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence            9885321       33 5688888777653222211 110             112222111 010     135666777


Q ss_pred             ccc--CCceEEEEeCC-CCccccC-CcHHHHHHHHh---C-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCch
Q 019868          214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       214 l~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK  283 (334)
                      +..  +++.+|++.-. ..-.|.. .+.+.++++.+   . ++++|+||++.+|...+...  ...+ -..++++  |+|
T Consensus       200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g-v~PDiv~--~gK  276 (429)
T PRK06173        200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAG-VVPDIMC--IGK  276 (429)
T ss_pred             HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcC-CCCCEEE--eeh
Confidence            642  35667777642 5556765 56666666554   3 99999999997764333221  1111 1223444  999


Q ss_pred             hhcccc-cchheeEcCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhc
Q 019868          284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       284 ~~gl~G-~R~G~l~~~~~~i~~l~~-------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .++ .| +-+|.+++++++.+.+..       ....+..++++.+++.++|+
T Consensus       277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  327 (429)
T PRK06173        277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR  327 (429)
T ss_pred             hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence            986 67 467888889998887753       11235678888888887765

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=98.85  E-value=3.4e-07  Score=89.93  Aligned_cols=233  Identities=15%  Similarity=0.219  Sum_probs=139.4

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++.+ +...    ..| +.+...+|-+.|++..+...+.++++++++++...
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~  128 (457)
T PRK05639         49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM  128 (457)
T ss_pred             eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            44678899997763  3444 45788888765 3221    122 33344568888887765444689999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCC--------CCH--------HH
Q 019868          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL  209 (334)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~--------~d~--------~~  209 (334)
                      +++.-.  ....+|+....+|......+.. .|.             .+..+|..+.+.        -|.        +.
T Consensus       129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (457)
T PRK05639        129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY  208 (457)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence            988432  2335788777777654332221 111             123333221110        022        23


Q ss_pred             HHHhc-----ccCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868          210 IADAV-----EREKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV  277 (334)
Q Consensus       210 l~~~l-----~~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~  277 (334)
                      +++.+     ...++.+|++.-.....|... +.+.++++.+   . ++++|+||++.+|...+....  ..+- ..+++
T Consensus       209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv  287 (457)
T PRK05639        209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLI  287 (457)
T ss_pred             HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEE
Confidence            44433     124567777764455567655 5655555544   4 999999999987754332211  1111 22344


Q ss_pred             EcCCchhhcccccchheeEcCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~-~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +  |+|.+| .|+.+|.+++++++.+.... ....+..++++.+++.+.|+
T Consensus       288 ~--~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~  335 (457)
T PRK05639        288 I--FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLE  335 (457)
T ss_pred             E--echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHH
Confidence            4  899987 68889999999998883211 12235678888777777764

>PRK07481 hypothetical protein; Provisional

Probab=98.82  E-value=2.4e-07  Score=90.83  Aligned_cols=232  Identities=16%  Similarity=0.170  Sum_probs=137.7

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID  160 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~  160 (334)
                      .+++.+||+..+  ...++ ..|++.+++++ +....      .++.+...+|.+.|++.++ -..+.+++++++++++.
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve  118 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE  118 (449)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence            467788998655  23344 45788888765 32211      2344445667777777763 22358999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCC----CCC-CCHHHH----
Q 019868          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKS----DFS-LNVELI----  210 (334)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~----~~~-~d~~~l----  210 (334)
                      .+++.-..       +| .+|+...-.|......+... |-            .+..++.+.    .|. .|++.+    
T Consensus       119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~  198 (449)
T PRK07481        119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC  198 (449)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence            99884321       23 57888887776544322221 10            122222111    111 244433    


Q ss_pred             ----HHhcc---cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868          211 ----ADAVE---REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (334)
Q Consensus       211 ----~~~l~---~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i  276 (334)
                          ++.+.   .+++.+|++.-...-.|... +.   ++++++++. ++++|.||++.+|...+....  ..+- ..++
T Consensus       199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDi  277 (449)
T PRK07481        199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDI  277 (449)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCE
Confidence                33332   24567777765555567755 44   445555655 999999999998854332211  1111 1223


Q ss_pred             EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +  +++|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+
T Consensus       278 v--~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~  335 (449)
T PRK07481        278 M--CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLD  335 (449)
T ss_pred             E--EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH
Confidence            3  3699887 57 5899999999998877531         2236778988888888764

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.82  E-value=3.5e-07  Score=88.93  Aligned_cols=233  Identities=12%  Similarity=0.137  Sum_probs=138.9

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC---C--CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+  ...++ ..|++.+++.+ ++..   .  .+..+...+|.+.|++..+-.-+.++++++++++...
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~  115 (422)
T PRK05630         36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV  115 (422)
T ss_pred             ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            3467788998765  33344 45788888765 3221   1  1233345677788877765334689999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCCCC-------HHHHHH
Q 019868          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD  212 (334)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~~d-------~~~l~~  212 (334)
                      +++.-..       ++ .+|+...-+|......+.. .+-             ....+|.......+       .+.+++
T Consensus       116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  195 (422)
T PRK05630        116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL  195 (422)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence            8884321       22 5788888877653322221 111             11223321111111       234444


Q ss_pred             hcccCCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhh
Q 019868          213 AVEREKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRA  285 (334)
Q Consensus       213 ~l~~~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~  285 (334)
                      .+. +++.+|++.- ...-.|... +.+.++++   ++. ++++|+||++..|...+.....- ..-..+++  +|+|.+
T Consensus       196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l  272 (422)
T PRK05630        196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM--CVGKAL  272 (422)
T ss_pred             HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee--eeechh
Confidence            454 4677777764 255567654 45555544   544 99999999998775333222111 11122233  789987


Q ss_pred             cccc-cchheeEcCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhc
Q 019868          286 GLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       286 gl~G-~R~G~l~~~~~~i~~l~~~--------~~~~~~~~~~q~aa~~~L~  327 (334)
                      + .| ..+|++++++++.+.+...        ...|..++++.+++.++|+
T Consensus       273 ~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~  322 (422)
T PRK05630        273 T-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLE  322 (422)
T ss_pred             h-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHH
Confidence            5 46 5789999999999887531        2347788888888887764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.82  E-value=2.4e-07  Score=91.19  Aligned_cols=233  Identities=12%  Similarity=0.152  Sum_probs=140.1

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+.  ..++ ..|++.+++.+ +...     ..|......+|.+.|++......+.++++++++++...
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  122 (466)
T PRK07030         43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV  122 (466)
T ss_pred             ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence            34677889987663  3333 45788887765 3221     12333345667777777665344689999999999999


Q ss_pred             HHHHhc------C-C-CCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCC----CC--------CHH
Q 019868          162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (334)
Q Consensus       162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~~--------d~~  208 (334)
                      +++...      . + ..+|+...-+|......+.. .|.            .+..+|..+.+    +.        +++
T Consensus       123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~  202 (466)
T PRK07030        123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA  202 (466)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence            988531      1 2 35788888778654433222 111            12223311111    11        245


Q ss_pred             HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEE
Q 019868          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i  278 (334)
                      .+++.+..  +++.+|++.- ...-.|... +.+.+++   +++. ++++|.||++.+|...+.....  .+- ..++++
T Consensus       203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~  281 (466)
T PRK07030        203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLC  281 (466)
T ss_pred             HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEe
Confidence            56666642  3566777664 244456644 4555544   4554 9999999999888643322111  111 122333


Q ss_pred             cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~  327 (334)
                        |+|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+
T Consensus       282 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~  337 (466)
T PRK07030        282 --LSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD  337 (466)
T ss_pred             --eehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence              699987 78 489999999999887742         12336778999888888774

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=98.81  E-value=1.1e-07  Score=94.62  Aligned_cols=156  Identities=13%  Similarity=0.088  Sum_probs=112.2

Q ss_pred             EEEeCCHHHHHHHHHHHh----cC----------------------CCCEEEEcCCCChhHHHHHHHCCC---eEEEeeC
Q 019868          149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR  199 (334)
Q Consensus       149 I~~t~G~~~~i~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~G~---~v~~v~~  199 (334)
                      -++|+|++++....+.+-    +.                      ++..|++++-.|......++..|.   +++.+|.
T Consensus       162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~  241 (522)
T TIGR03799       162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT  241 (522)
T ss_pred             eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence            567888888877665532    11                      134688888999999999998888   7889998


Q ss_pred             CCCCCCCHHHHHHhccc---CCceEEEEe--CCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcC-
Q 019868          200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKK-  271 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~---~~~~~i~l~--~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~-  271 (334)
                      ++++.+|+++|++++++   .+++.+.++  ..++.||.+-|.+++.++++. ++++++|.+|..... .+.....+.. 
T Consensus       242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl  321 (522)
T TIGR03799       242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI  321 (522)
T ss_pred             CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence            88899999999998852   345555554  557799999999999999988 999999999986432 1111122222 


Q ss_pred             CCcEEEEcCCchhhcccccchheeEcC-HHHHHHH
Q 019868          272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL  305 (334)
Q Consensus       272 ~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l  305 (334)
                      ..-..++.+.+|.++ .-..+|.+++. ++..+.+
T Consensus       322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~  355 (522)
T TIGR03799       322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAI  355 (522)
T ss_pred             hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHh
Confidence            234578889999543 33558988874 4554544

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.81  E-value=2.9e-07  Score=90.51  Aligned_cols=233  Identities=15%  Similarity=0.174  Sum_probs=141.6

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +..   .  ..++.....+|-+.|++.++-..+.++++++++++...
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~  131 (460)
T PRK06916         52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI  131 (460)
T ss_pred             eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34677889986652  3333 45788888765 322   1  12344445678888888775334689999999999999


Q ss_pred             HHHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC----CC--------CCHH
Q 019868          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE  208 (334)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~----~~--------~d~~  208 (334)
                      +++...       .+| .+|+...-+|......+.. .|.            .+..+|....    +.        -+++
T Consensus       132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~  211 (460)
T PRK06916        132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE  211 (460)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            988432       133 6788888888654432222 111            1222321110    11        1345


Q ss_pred             HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i  278 (334)
                      .+++.++.  +++.+|++.- ...-.|... +.+.++++.+   . ++++|.||++.+|...+....  ..+- ..+++ 
T Consensus       212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv-  289 (460)
T PRK06916        212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIM-  289 (460)
T ss_pred             HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCee-
Confidence            66666642  3566777664 355567654 6666665544   3 999999999988753332211  1111 12233 


Q ss_pred             cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~  327 (334)
                       +++|.++ .| +.+|.+++++++.+.+..         ....++.++++.+++.+.|+
T Consensus       290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~  346 (460)
T PRK06916        290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE  346 (460)
T ss_pred             -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH
Confidence             4799987 67 589999999999887642         11236678888888888764

>PRK06917 hypothetical protein; Provisional

Probab=98.80  E-value=6.4e-07  Score=87.77  Aligned_cols=233  Identities=15%  Similarity=0.155  Sum_probs=139.2

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-CC----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.+||+..|  ...++ ..|++.+++++ +.. .+    .|+.....+|.+.|++.++-..+.++++++++++...
T Consensus        27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  106 (447)
T PRK06917         27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET  106 (447)
T ss_pred             eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence            3467789998766  33344 46888888765 322 11    2333334567777777765334689999999999999


Q ss_pred             HHHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCC----CC--------CHH
Q 019868          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (334)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~~--------d~~  208 (334)
                      +++...       .+| .+|+...-.|......+.. .|.            .+..++....+    .-        +++
T Consensus       107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  186 (447)
T PRK06917        107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT  186 (447)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence            998541       123 6788888778654433222 121            11112211000    00        235


Q ss_pred             HHHHhccc---CCceEEEEeCCC-CccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868          209 LIADAVER---EKPKCIFLTSPN-NPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV  277 (334)
Q Consensus       209 ~l~~~l~~---~~~~~i~l~~p~-NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~  277 (334)
                      .+++.++.   +++.+|++.-.. +--|... +.+.++++   ++. ++++|+||++.+|...+....  ..+-.+ ++ 
T Consensus       187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~P-Di-  264 (447)
T PRK06917        187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEP-DI-  264 (447)
T ss_pred             HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCC-CE-
Confidence            66666642   346677776333 3344544 56655555   444 999999999987753332211  111112 23 


Q ss_pred             EcCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~  327 (334)
                       -+|+|.+| .|. .+|.+++.+++.+.+...      ...++.++++.+++.+.|+
T Consensus       265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~  319 (447)
T PRK06917        265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLE  319 (447)
T ss_pred             -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHH
Confidence             35799987 675 899999999998877532      1236778888888888775

>PRK07483 hypothetical protein; Provisional

Probab=98.80  E-value=6.9e-07  Score=87.44  Aligned_cols=233  Identities=13%  Similarity=0.158  Sum_probs=136.8

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ..+++.++|+..+  ...++ .+|++.+++++ +....     .|..+...+|.+.|++...-..+.++++++++++...
T Consensus        26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  105 (443)
T PRK07483         26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA  105 (443)
T ss_pred             eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence            3467789999766  33444 45888888765 32211     1333334567777777664334689999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC-----C--------H
Q 019868          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V  207 (334)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~-----d--------~  207 (334)
                      +++....       +| .+|+...-.|......+.. .|-            .+..++....+.-     +        +
T Consensus       106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (443)
T PRK07483        106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA  185 (443)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence            8884321       33 4678777777644322221 111            1122221111110     0        2


Q ss_pred             HHHHHhcc---cCCceEEEEeCCCC-ccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868          208 ELIADAVE---REKPKCIFLTSPNN-PDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (334)
Q Consensus       208 ~~l~~~l~---~~~~~~i~l~~p~N-PtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i  276 (334)
                      +.+++.+.   .+++.+|++.-... --|... +.+.+++   +++. ++++|.||++.+|...+....  ..+- ..++
T Consensus       186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDi  264 (443)
T PRK07483        186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDL  264 (443)
T ss_pred             HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCe
Confidence            45665453   13566777764332 235544 5545544   4554 999999999998854332221  1111 1223


Q ss_pred             EEcCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       277 ~i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +  +++|.++ .|+ .+|.+++++++.+.+...      ...|+-|+++.+++.+.|+
T Consensus       265 v--~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~  319 (443)
T PRK07483        265 V--TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQR  319 (443)
T ss_pred             e--eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence            3  4799987 685 899999999998877532      2346788888888888774

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.79  E-value=1.5e-07  Score=97.61  Aligned_cols=173  Identities=14%  Similarity=0.117  Sum_probs=117.8

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHH--HHHHH-hcC---C-CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCC
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELID--LIMRC-VLD---P-GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF  203 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~--~~~~~-l~~---~-gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~  203 (334)
                      ..+|.+.++++.|.+.-.+.-.+|+..-+.  ++++. ...   + .++|+++.-.|+.....+...|++++.++.++++
T Consensus       545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G  624 (954)
T PRK12566        545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDG  624 (954)
T ss_pred             HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCC
Confidence            357888888888976554444444433212  22222 122   2 3678899888866566677899999999987778


Q ss_pred             CCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       204 ~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                      .+|+++|++.+++  .++.+|++++|++-.+...+.+++.++++. ++++++|.++..-.   .......+.+-++++++
T Consensus       625 ~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~---~~l~~Pg~~GADi~~~s  701 (954)
T PRK12566        625 NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ---VGLARPADIGADVSHMN  701 (954)
T ss_pred             CcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc---cCCCChhhcCCCEEEec
Confidence            9999999999862  467788888988866666668888888877 99999999985211   11122234566799999


Q ss_pred             Cchhhccc----ccchheeEcCHHHHHHHH
Q 019868          281 FSKRAGLA----GLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       281 ~SK~~gl~----G~R~G~l~~~~~~i~~l~  306 (334)
                      +.|.|+.|    |.-+|.+.+.+.+...+.
T Consensus       702 ~HKtf~~P~G~GGP~vG~iav~~~L~pfLp  731 (954)
T PRK12566        702 LHKTFCIPHGGGGPGMGPIGVRAHLAPFVA  731 (954)
T ss_pred             CCcccCcCccCCCCccchhhhhhhhhhhcc
Confidence            99988533    555676666665554444

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.79  E-value=3.9e-07  Score=88.79  Aligned_cols=232  Identities=14%  Similarity=0.145  Sum_probs=136.2

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .++.+++|+..|.  ..++ .+|++.+++.+ +...    . .++.....++-+.+++..+-.-+.+++++++++++..+
T Consensus        42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A  121 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA  121 (427)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence            3567789987653  2333 45788877765 3211    1 12333456777888887754447899999999999988


Q ss_pred             HHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCCe-------------EEEeeCC-CCCC-----CCHHHHHHhc
Q 019868          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRK-SDFS-----LNVELIADAV  214 (334)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~~-------------v~~v~~~-~~~~-----~d~~~l~~~l  214 (334)
                      ++.-..       +| .+|+...-+|......+.. .|..             +..++.. ..+.     -|++++++.+
T Consensus       122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l  201 (427)
T TIGR00508       122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM  201 (427)
T ss_pred             HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence            884321       23 5788888777654322222 1211             1111110 1111     1456667666


Q ss_pred             cc--CCceEEEEeCC-CCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchh
Q 019868          215 ER--EKPKCIFLTSP-NNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~  284 (334)
                      ..  ++..+|++... .+-.|. ..+.+.+.+|.+.    ++++|+||++.+|...+..  ....+- ...+++  ++|.
T Consensus       202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~  278 (427)
T TIGR00508       202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKA  278 (427)
T ss_pred             HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echh
Confidence            42  34556665542 444454 3456666666543    9999999999776433321  111111 222443  8999


Q ss_pred             hccccc-chheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868          285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       285 ~gl~G~-R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++ .|+ -++.++.++++.+.+...       ...|..++++.+++.++|+
T Consensus       279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  328 (427)
T TIGR00508       279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA  328 (427)
T ss_pred             hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence            86 674 577788889998887642       1235668888888887776

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.78  E-value=5.5e-07  Score=84.81  Aligned_cols=212  Identities=18%  Similarity=0.103  Sum_probs=145.2

Q ss_pred             CHHHHHHHhcC-c---CCCCCCCcC--hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE-----EcC
Q 019868          110 PPEVREALGQL-K---FPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP  177 (334)
Q Consensus       110 ~~~v~~al~~~-~---~~~~Yp~~g--~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl-----~~~  177 (334)
                      .+++.+++... .   ....|-..+  ..+++.....+.++. .+.+++++..+.++..++.++..++..|+     ++ 
T Consensus        40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-  118 (395)
T COG1921          40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-  118 (395)
T ss_pred             CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence            46777776542 1   112232222  344543333344553 57899999999999999998876444443     33 


Q ss_pred             CCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       178 p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      +..+......+..|++++.+-..  ..-...+++.++. +++++++=. +.|.+-=..++.+++.+|++. ++++++|.+
T Consensus       119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a  195 (395)
T COG1921         119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA  195 (395)
T ss_pred             CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence            56678899999999999998743  2457889999997 567665544 555444446788999999998 999999998


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      -.......+.....-..+..+++.|-.|.+|  |.+-|.+++.+++++.+.+..-.  +-+..+..++..++|+
T Consensus       196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe  267 (395)
T COG1921         196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE  267 (395)
T ss_pred             CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence            7665543333333334456799999999875  99999999999999988766544  4455555555555554

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.74  E-value=6.4e-07  Score=88.28  Aligned_cols=233  Identities=12%  Similarity=0.133  Sum_probs=140.2

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CCC--CCCCcChHHHHHHHHHhcCC-----CCCCEEEeCCHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD  156 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Yp~~g~~~lr~~lA~~~~~-----~~~~I~~t~G~~  156 (334)
                      ..+++.+||+..+  ...++ ..|++.+++.+ +.   +..  .|+.....+|-+.|++.+.-     +.+.++++++++
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS  139 (472)
T PRK08742         60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS  139 (472)
T ss_pred             eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence            3467788998766  33343 45788888765 22   211  23333355677777776642     235899999999


Q ss_pred             HHHHHHHHHhcC-------C-CCEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCCCC----CC------
Q 019868          157 ELIDLIMRCVLD-------P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------  205 (334)
Q Consensus       157 ~~i~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~----~~------  205 (334)
                      ++...+++....       + ..+|+...-+|......+... |.            .+..+|..+.+    +.      
T Consensus       140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~  219 (472)
T PRK08742        140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA  219 (472)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence            999999885321       2 267888888886554333221 11            12223321111    11      


Q ss_pred             --CHHHHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhh--hcCCC
Q 019868          206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEW--VKKHD  273 (334)
Q Consensus       206 --d~~~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~  273 (334)
                        +++.+++.+..  +++.+|++.- ..+-.|... +.+.++++   ++. ++++|.||++.+|...+.....  .+- .
T Consensus       220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~  298 (472)
T PRK08742        220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-M  298 (472)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-C
Confidence              24566666632  3566777654 255567644 56555555   444 9999999999988643322211  111 1


Q ss_pred             cEEEEcCCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868          274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       274 ~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .++++  ++|.++ .| +.+|.+++++++.+.+..        ....|+.++++.+++.+.|+
T Consensus       299 PDiv~--~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  358 (472)
T PRK08742        299 PDLLC--LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLD  358 (472)
T ss_pred             CCEEE--Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHH
Confidence            22333  699887 67 489999999999887642        12346778888888888775

>PLN02880 tyrosine decarboxylase

Probab=98.74  E-value=1.1e-07  Score=94.01  Aligned_cols=166  Identities=14%  Similarity=0.101  Sum_probs=118.3

Q ss_pred             HHHHHHHHhcCCCCC-------CEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCChhHHHHHHHCCCe-
Q 019868          133 RLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA-  193 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~-------~I~~t~G~~~~i~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~G~~-  193 (334)
                      ++.+.+++++|.+.+       .-++|+|++++....+.+-.+           +.-.|++++-.|......+...|+. 
T Consensus       126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~  205 (490)
T PLN02880        126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHP  205 (490)
T ss_pred             HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCH
Confidence            455566666787643       367788888887665543211           1125667888899999999999984 


Q ss_pred             --EEEeeCC--CCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-
Q 019868          194 --VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-  262 (334)
Q Consensus       194 --v~~v~~~--~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-  262 (334)
                        ++.||.+  +++.+|++.|++++++.     .+-+|+.+-..-.||.+-|.+++.++++. ++|+.+|.+|+.+... 
T Consensus       206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~  285 (490)
T PLN02880        206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACIC  285 (490)
T ss_pred             HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhC
Confidence              6777764  36789999999998632     24455556778899999999999999998 9999999999886531 


Q ss_pred             CCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +.....+.. ..-.-+...++|.+ +....+|.+++++
T Consensus       286 ~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~  322 (490)
T PLN02880        286 PEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKD  322 (490)
T ss_pred             HHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeC
Confidence            222222222 23457888999954 5777889988853

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.73  E-value=4e-07  Score=96.14  Aligned_cols=191  Identities=14%  Similarity=0.101  Sum_probs=132.6

Q ss_pred             ecCCCCCCCCCCHHHHHHH-hcCcCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           99 KIDANENPYGPPPEVREAL-GQLKFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al-~~~~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      .++.|..+.-.|+.+.+.+ .+-.....   | |.  .|    ..++++.++++.|++..|+.+..+++++.+.++.++-
T Consensus        80 ~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~  159 (954)
T PRK05367         80 YIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR  159 (954)
T ss_pred             ccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh
Confidence            3556666655666664444 33221223   3 22  23    3478899999999999999999999999998887763


Q ss_pred             -CC--CCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          168 -DP--GDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       168 -~~--gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                       .+  +++|++++-.|+.+...    ++..|++++.++.+++  ++         .+++.++++.+| |-+|.+.+.+++
T Consensus       160 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~---------~~~~~~vlvq~p-~~~G~i~d~~~i  227 (954)
T PRK05367        160 VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD---------HDDVFGVLLQYP-GTSGEVRDYTAL  227 (954)
T ss_pred             hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC---------cccEEEEEEecC-CCCeeeccHHHH
Confidence             44  48999999999876643    4568999999986432  11         134556666676 569999999999


Q ss_pred             HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh---hcccccchheeEcCHHHHHHH
Q 019868          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR---AGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       241 ~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~---~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      .++++. |+++++|-...-+.-    ...+.+.+-++++++..|.   +|+.|-..||+.+.+++.+.+
T Consensus       228 ~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~l  292 (954)
T PRK05367        228 IAAAHARGALVAVAADLLALTL----LTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSM  292 (954)
T ss_pred             HHHHHHcCCEEEEEehhhhccC----CCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhC
Confidence            999987 999999874422221    1123455667999999994   133455699999998877655

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=98.71  E-value=3e-07  Score=89.75  Aligned_cols=224  Identities=17%  Similarity=0.143  Sum_probs=127.8

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..++..+||+..+.  ..++ ..|++.+++++ ++....|.  .....+|.+.|++...- .+.++++++++++...+++
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~Alk  122 (431)
T PRK06209         44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVR  122 (431)
T ss_pred             eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHH
Confidence            44677899987653  3444 45888888876 33322332  22233678888887642 3689999999999999988


Q ss_pred             Hhc-CCC-CEEEEc-CCCChhHHHHH-----HHCCC------eEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCC
Q 019868          165 CVL-DPG-DKIVDC-PPTFTMYEFDA-----AVNGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPN  228 (334)
Q Consensus       165 ~l~-~~g-d~Vl~~-~p~y~~~~~~~-----~~~G~------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~  228 (334)
                      .-. -.| .+|+.. .-.|..+....     ...|.      .+..++     .-|++++++.++.  .++.+|++. |-
T Consensus       123 lAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~E-pv  196 (431)
T PRK06209        123 LARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILE-PA  196 (431)
T ss_pred             HHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEc-cc
Confidence            432 123 445543 12221110000     00011      011111     1278888888753  235556654 32


Q ss_pred             CccccCCcH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh-hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          229 NPDGSIIND---EDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       229 NPtG~~~~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                        .|...+.   +++.++++. ++++|+||++.+|........ ..+- ...  +.+++|.+| .|+.+|++++++++++
T Consensus       197 --~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv-~PD--i~t~gK~lg-gG~p~~av~~~~~i~~  270 (431)
T PRK06209        197 --TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGI-VPD--LSCFGKALG-NGFAVSALAGKREYME  270 (431)
T ss_pred             --cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCC-Ccc--eeeehhhhc-CCcccEEEEEHHHHHh
Confidence              2334454   455555555 999999999977643211111 1111 112  356899998 6788999999999888


Q ss_pred             H--HHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868          304 Y--LWR--------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       304 ~--l~~--------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .  +..        ....++.++++.+++.+.|+
T Consensus       271 ~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~  304 (431)
T PRK06209        271 LGGLEHTDRERVFLLSTTHGAETHALAAAIATMA  304 (431)
T ss_pred             hhcccccCCCCceeeccCCCCCHHHHHHHHHHHH
Confidence            6  311        11235667777777776654

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=98.70  E-value=4.7e-07  Score=86.46  Aligned_cols=179  Identities=12%  Similarity=0.044  Sum_probs=125.1

Q ss_pred             HHHHHhc--CcCCCCCCCcC--hHHHHHHHHHhcCCCCCC--EEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChh-HH
Q 019868          113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTM-YE  184 (334)
Q Consensus       113 v~~al~~--~~~~~~Yp~~g--~~~lr~~lA~~~~~~~~~--I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~-~~  184 (334)
                      ..+++++  +...++-|...  ..+.++.+.++++.+.+.  ++++.|++.+++.++..++ ++|++|++.. .|+. +.
T Consensus        19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~   97 (374)
T TIGR01365        19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV   97 (374)
T ss_pred             hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence            5667764  23333334432  567788888888874332  5669999999999999998 5889999876 6654 34


Q ss_pred             -HHHHHCCC-eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCC
Q 019868          185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL  262 (334)
Q Consensus       185 -~~~~~~G~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~  262 (334)
                       ..++..|+ ++..+..+.+..+|+++++.  +    +.|++++-.-.||...+.+++.+.. .+.++|+|.+-+-....
T Consensus        98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~~  170 (374)
T TIGR01365        98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQD  170 (374)
T ss_pred             HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCCC
Confidence             77888999 47777765666789998873  1    2366788888999999986544322 27899999986644321


Q ss_pred             CCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                       -.+.     +-.+++.|..|.+++++ .+++++++++.+++..
T Consensus       171 -l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~  207 (374)
T TIGR01365       171 -LDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLE  207 (374)
T ss_pred             -CChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHh
Confidence             1111     24589999999998764 3677888888887655

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.65  E-value=4.1e-07  Score=86.01  Aligned_cols=231  Identities=19%  Similarity=0.218  Sum_probs=136.3

Q ss_pred             CCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-C----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      +++.++|+..+  ...++ .+|++.+++++ +.. .    ..++.+...+|-+.|.+.++-..++++++++++++++.++
T Consensus        14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Al   93 (339)
T PF00202_consen   14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAAL   93 (339)
T ss_dssp             TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHH
Confidence            56678998654  44454 45788888765 221 1    1222333567888888888545579999999999999999


Q ss_pred             HHhc-------C-CCCEEEEcCCCChhHHHH-HHHCC------------CeEEEeeCCCCCC-----CCHHHHH---Hhc
Q 019868          164 RCVL-------D-PGDKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFS-----LNVELIA---DAV  214 (334)
Q Consensus       164 ~~l~-------~-~gd~Vl~~~p~y~~~~~~-~~~~G------------~~v~~v~~~~~~~-----~d~~~l~---~~l  214 (334)
                      +...       . .-.+|+...-+|...... ....+            ..+..+|.++...     -..+.++   ...
T Consensus        94 kla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  173 (339)
T PF00202_consen   94 KLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAAL  173 (339)
T ss_dssp             HHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhh
Confidence            8654       1 336888888888643321 11111            1344555321100     0011122   222


Q ss_pred             ccCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcc
Q 019868          215 EREKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl  287 (334)
                      ..+++.+|++.-...-.|... +.+.+   +++++. ++++|+||++..|...+...  ...+- ..++++  ++|.++ 
T Consensus       174 ~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~--~gK~l~-  249 (339)
T PF00202_consen  174 NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVT--FGKGLG-  249 (339)
T ss_dssp             HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEE--EEGGGG-
T ss_pred             cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccc--cccchh-
Confidence            234566777764444456555 44444   445554 99999999999986433322  11222 223444  579998 


Q ss_pred             cccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          288 AGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      .|+.+|.+++.+++.+.+....  ..++-++++.+++.+.|+
T Consensus       250 gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~  291 (339)
T PF00202_consen  250 GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLE  291 (339)
T ss_dssp             TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred             hhhhcccccccchhhccccccccccccccchHhhhhhhhHHH
Confidence            6799999999999988764322  346778888888888775

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.65  E-value=3.2e-07  Score=87.78  Aligned_cols=166  Identities=19%  Similarity=0.140  Sum_probs=111.2

Q ss_pred             HHHHHHHHhcCCCC-------CCEEEeCCHHHHHHHHHHHhc--------CCC-----C-EEEEcCCCChhHHHHHHHCC
Q 019868          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVL--------DPG-----D-KIVDCPPTFTMYEFDAAVNG  191 (334)
Q Consensus       133 ~lr~~lA~~~~~~~-------~~I~~t~G~~~~i~~~~~~l~--------~~g-----d-~Vl~~~p~y~~~~~~~~~~G  191 (334)
                      ++.+.+++++|.+.       ..=++|+|+++++...+.+..        ..|     . .|++++-.|......+...|
T Consensus        83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG  162 (373)
T PF00282_consen   83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG  162 (373)
T ss_dssp             HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred             HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence            45556666677762       246788999999877765431        112     2 56777778999999999999


Q ss_pred             CeEEEeeCCCCCCCCHHHHHHhcccC--C---ceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCC
Q 019868          192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (334)
Q Consensus       192 ~~v~~v~~~~~~~~d~~~l~~~l~~~--~---~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~  264 (334)
                      +.++.||.++++.+|+++|++++.+.  +   +-+|+.+.....||.+=+.+++.+|++. ++|+.+|.+|..... .+.
T Consensus       163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~  242 (373)
T PF00282_consen  163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE  242 (373)
T ss_dssp             SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred             eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence            99999998888999999999987532  1   2255556778899999999999999987 999999999998331 111


Q ss_pred             chhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       265 ~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ....... ..-.=+.-+++|.++ .-..+|+++...
T Consensus       243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~  277 (373)
T PF00282_consen  243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD  277 (373)
T ss_dssp             TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS
T ss_pred             ccccccccccccccccchhhhhc-CCccceeEEeec
Confidence            1111111 112245558899665 567889988854

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PLN02590 probable tyrosine decarboxylase

Probab=98.64  E-value=6e-07  Score=89.37  Aligned_cols=166  Identities=13%  Similarity=0.077  Sum_probs=115.9

Q ss_pred             HHHHHHHHhcCCCC-------CCEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCChhHHHHHHHCCC--
Q 019868          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA--  192 (334)
Q Consensus       133 ~lr~~lA~~~~~~~-------~~I~~t~G~~~~i~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~G~--  192 (334)
                      .+.+.+++++|.+.       ..=++++|++++....+.+-.+           +.-.|++++-+|......+...|+  
T Consensus       174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~  253 (539)
T PLN02590        174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE  253 (539)
T ss_pred             HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence            34555566667764       2356788888877665543211           112566778889999999999988  


Q ss_pred             -eEEEeeCC--CCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-C
Q 019868          193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-L  262 (334)
Q Consensus       193 -~v~~v~~~--~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~  262 (334)
                       +++.||.+  +++.+|++.|++++++.     .+-+|+.+-..-.||.+=+.++|.+|++. ++|+.+|.+|+.+.. -
T Consensus       254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~  333 (539)
T PLN02590        254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC  333 (539)
T ss_pred             ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence             57888865  46899999999998632     23455656778889999999999999998 999999999998762 1


Q ss_pred             CCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +.....+.. ..-.=+...++|.+ ....-+|.+++..
T Consensus       334 ~~~r~~~~Gie~ADSit~D~HK~l-~~p~~cg~llvr~  370 (539)
T PLN02590        334 PEYRKFIDGIENADSFNMNAHKWL-FANQTCSPLWVKD  370 (539)
T ss_pred             hhhHHHhcCCccCCEEEECchhhc-CcCcCEEEEEecC
Confidence            222222221 22235566889954 5677789888754

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.64  E-value=6.7e-07  Score=83.14  Aligned_cols=235  Identities=16%  Similarity=0.135  Sum_probs=148.9

Q ss_pred             CCCCCCeeecCCCCC--CC-CCCHHHHHHHhc-C----cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-L----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~----~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ...+..++|+-.|.-  .. ...|++.+++.+ +    .....|-.+-..++-++|+..+.-+-+.++++++++|+.++.
T Consensus        46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela  125 (442)
T KOG1404|consen   46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA  125 (442)
T ss_pred             cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence            445666777655532  12 246888887764 2    123556566678999999999976667799999999999998


Q ss_pred             HHHhc--CCCCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCC-----------CC-----CCCC---------HHHHHHhc
Q 019868          163 MRCVL--DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRK-----------SD-----FSLN---------VELIADAV  214 (334)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~-----------~~-----~~~d---------~~~l~~~l  214 (334)
                      ++...  ...-.++.-..+|. +....+..-|......+.+           .+     |+=+         .++++..+
T Consensus       126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i  205 (442)
T KOG1404|consen  126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI  205 (442)
T ss_pred             HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence            87532  22234555555664 3333333323222221100           00     0001         13333333


Q ss_pred             c---cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868          215 E---REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       215 ~---~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      .   .+.+.+++.......-|.+- +.   +...++++. +.++|.||+...|...+ .+...+.++-+--+-|++|..|
T Consensus       206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG  284 (442)
T KOG1404|consen  206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG  284 (442)
T ss_pred             HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence            2   23344555555555556654 33   444556665 99999999999998766 4444455565666789999998


Q ss_pred             ccccchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhc
Q 019868          287 LAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQ  327 (334)
Q Consensus       287 l~G~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~  327 (334)
                       .|..+|.++..+++.+.+.+....   |.-++++.+++.++|+
T Consensus       285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~  327 (442)
T KOG1404|consen  285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLK  327 (442)
T ss_pred             -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHH
Confidence             889999999999999998887744   5678888888888875

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.61  E-value=1.2e-06  Score=92.52  Aligned_cols=191  Identities=13%  Similarity=0.100  Sum_probs=129.2

Q ss_pred             cCCCCCCCCCCHHHHHHHhc-CcCC---CCC-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 019868          100 IDANENPYGPPPEVREALGQ-LKFP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L  167 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~-~~~~---~~Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~  167 (334)
                      ++.|..+.-.|+.+.+++.+ ....   .-| |.  .|    ..++++.++++.|++++++-++.|++++.+.++.++ .
T Consensus       108 iG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~  187 (993)
T PLN02414        108 IGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNI  187 (993)
T ss_pred             cCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhc
Confidence            45556666677777666554 2221   334 33  23    457899999999999999999999999999888766 3


Q ss_pred             CCC--CEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          168 DPG--DKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       168 ~~g--d~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      .+|  ++|++++-.|+.+...+    +..|++++.++.++.   +      ... +.+-.+++..|+ -+|.+.+.+++.
T Consensus       188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~-~~v~~vlvq~P~-~~G~v~dv~~I~  256 (993)
T PLN02414        188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS-GDVCGVLVQYPA-TDGEVLDYAEFV  256 (993)
T ss_pred             ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-CceEEEEEecCC-CCeEEcCHHHHH
Confidence            444  78999999998765544    447999999885321   1      111 233345555555 499999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh---cccccchheeEcCHHHHHHH
Q 019868          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ++++. ++++++ .+... ..  .....+.+.+-++++++..|..   |..|.+.||+++.+++.+.+
T Consensus       257 ~~ah~~GaL~iV-aad~l-al--~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~  320 (993)
T PLN02414        257 KNAHANGVKVVM-ATDLL-AL--TMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLM  320 (993)
T ss_pred             HHHHHcCCEEEE-EECHH-Hh--cCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhC
Confidence            99987 888888 33221 11  1111133456679999988843   23467789999988876543

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=98.59  E-value=3.4e-06  Score=81.08  Aligned_cols=224  Identities=13%  Similarity=0.105  Sum_probs=138.6

Q ss_pred             eeecCCCCCCC-CCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCEE
Q 019868           97 IVKIDANENPY-GPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKI  173 (334)
Q Consensus        97 ~i~l~~~~~~~-~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-~gd~V  173 (334)
                      +|||-+ +.-. .+++++.+++..-+  ..| .++...+|++.+++++|.+  .++.|..+..+-..++..+++ +||++
T Consensus        43 ~IDLrS-DTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~E--~alpthqGRgaE~Il~~~~~~~~g~e~  117 (467)
T TIGR02617        43 FIDLLT-DSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_pred             EEECcc-CCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCCc--eEEECCCCchHHHHHHHhhcccccccc
Confidence            488865 3344 37788888887622  347 5667899999999999964  578887778888888888888 78877


Q ss_pred             EEcCC--------CChhHHHHHHHCCCeEEEeeC----------CCCCCCCHHHHHHhcccC---CceEEEEeCCCC-cc
Q 019868          174 VDCPP--------TFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNN-PD  231 (334)
Q Consensus       174 l~~~p--------~y~~~~~~~~~~G~~v~~v~~----------~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~N-Pt  231 (334)
                      ++..+        .|......+...|+.++.++.          ..++.+|++++++++++.   +.-.+...--+| --
T Consensus       118 g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G  197 (467)
T TIGR02617       118 GLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG  197 (467)
T ss_pred             cccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence            75443        122233456678998887631          224689999999999742   222222221123 35


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCc----Cc------cCCCCchhhhc-C--CCcEEEEcCCchhhccc-ccchh
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYT----EF------SGLESRMEWVK-K--HDNLIVLRTFSKRAGLA-GLRVG  293 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~----~~------~~~~~~~~~~~-~--~~~~i~i~S~SK~~gl~-G~R~G  293 (334)
                      |++++.+.++++.+.    |+.++.|.+=.    .|      .+.+.....+. +  ..-+.+..|+||.+|.+ |   |
T Consensus       198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG---g  274 (467)
T TIGR02617       198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG---G  274 (467)
T ss_pred             CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc---c
Confidence            889999999888765    99999997521    11      11112222111 0  12236677999988766 4   6


Q ss_pred             eeEcCHH-HHHHHHHhcC---C-------CCCcHHHHHHHHHHhcC
Q 019868          294 YGAFPLS-IIEYLWRAKQ---P-------YNVSVAAEVAACAALQN  328 (334)
Q Consensus       294 ~l~~~~~-~i~~l~~~~~---~-------~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++ +.+.+.+.+.   .       -+.+.-...+....|++
T Consensus       275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e  320 (467)
T TIGR02617       275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD  320 (467)
T ss_pred             eEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence            6666543 3333333332   1       13555555555555543

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.49  E-value=4e-06  Score=82.53  Aligned_cols=232  Identities=16%  Similarity=0.155  Sum_probs=134.7

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCC---CCEEEe-CCHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES---DHILVG-CGADE  157 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~---~~I~~t-~G~~~  157 (334)
                      ..+++.++|+..|.  ..++ .+|++.+++++ +....     .|+.+...+|-+.+.+.+.-.-   +.++++ +++++
T Consensus        59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE  138 (464)
T PRK06938         59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD  138 (464)
T ss_pred             eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence            44678889986663  3344 46888888775 32111     2334344556666666654211   356664 68889


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC------------CCHHHH
Q 019868          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVELI  210 (334)
Q Consensus       158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~------------~d~~~l  210 (334)
                      +...+++...  ....+|+...-+|......+.. .|            ..+..++....+.            .+++.+
T Consensus       139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  218 (464)
T PRK06938        139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL  218 (464)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence            9999888432  2236788777777654332222 11            0122333211111            135677


Q ss_pred             HHhccc-----CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEE
Q 019868          211 ADAVER-----EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVL  278 (334)
Q Consensus       211 ~~~l~~-----~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i  278 (334)
                      ++.+.+     +++.+|++.-...--|.+. +.+.++++   ++. |+++|.||++.+|...+.....  .+- ..++++
T Consensus       219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~  297 (464)
T PRK06938        219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVV  297 (464)
T ss_pred             HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEE
Confidence            777752     1456777653344446654 46555554   444 9999999999988643322211  111 122333


Q ss_pred             cCCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~  327 (334)
                        ++|.+| .|+.+|.+++.+++ +.+..  ....|+.|+++.+++.+.|+
T Consensus       298 --~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~  344 (464)
T PRK06938        298 --LSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLR  344 (464)
T ss_pred             --eecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence              699987 78999999988774 54421  22347788999888888875

>PLN02452 phosphoserine transaminase

Probab=98.48  E-value=3.3e-06  Score=80.54  Aligned_cols=192  Identities=16%  Similarity=0.082  Sum_probs=124.3

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-C-c----------CCCCCCCcC--hHHHHHHHHHhcCCCCC-C-EEEeCCHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLESD-H-ILVGCGADELID  160 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~Yp~~g--~~~lr~~lA~~~~~~~~-~-I~~t~G~~~~i~  160 (334)
                      ++.|..  -|...|++|++++.. + +          ..++-++..  ..+.++.|.++++++.+ + +++..|++.++.
T Consensus         8 ~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e   85 (365)
T PLN02452          8 VFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA   85 (365)
T ss_pred             eEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence            455543  355667888888764 2 1          223333321  56788888888997433 3 555789999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCC---CCCCHHHHHHhcccCCceEEEEeCCCCccccC-
Q 019868          161 LIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI-  234 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~---~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-  234 (334)
                      .++..++.+|+++++......  -+...++.+|...+......+   ..+++++++.   .++.+.|.+++-.-.||.. 
T Consensus        86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~~  162 (365)
T PLN02452         86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVEF  162 (365)
T ss_pred             HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEec
Confidence            999999999998877765443  244566777764444321111   1466776522   2467888888888899996 


Q ss_pred             CcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       235 ~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      .+.+++   .  ++++|+|.+..-.... -   .+.+.+  +...|..|.+|.+|  +|++++++++++++.
T Consensus       163 ~~~~~i---~--~~~lvVDa~Ss~g~~p-i---dv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~  221 (365)
T PLN02452        163 KDYPDV---G--NVPLVADMSSNFLSKP-V---DVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNAR  221 (365)
T ss_pred             Cccccc---C--CCeEEEECCccccCcc-c---CHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcc
Confidence            443333   2  4789999987644321 1   112223  34469999999888  799999999887653

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.48  E-value=8.3e-06  Score=80.21  Aligned_cols=232  Identities=15%  Similarity=0.197  Sum_probs=130.7

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CC-CE-EEeCCHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SD-HI-LVGCGADEL  158 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~-~I-~~t~G~~~~  158 (334)
                      ..+++.+||+..+.  ..++ ..|++.+++++ +...     ..++.+...+|-+.+++..+-. .+ .+ +++++++++
T Consensus        54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA  133 (459)
T PRK06931         54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA  133 (459)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence            45678899997763  3334 46888888775 3211     1123333456667777666422 11 34 556888899


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCC----C----CCHHHH----H
Q 019868          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDF----S----LNVELI----A  211 (334)
Q Consensus       159 i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~----~----~d~~~l----~  211 (334)
                      ...+++...  ....+|+...-.|......+.. .|            ..+..+|..+.+    .    -+.+.+    +
T Consensus       134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (459)
T PRK06931        134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE  213 (459)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            998888432  2346788888778655443332 11            112233321111    1    022222    2


Q ss_pred             Hhcc-----cCCceEEEEeCCCCccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEc
Q 019868          212 DAVE-----REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLR  279 (334)
Q Consensus       212 ~~l~-----~~~~~~i~l~~p~NPtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~  279 (334)
                      +.+.     .+++.+|++.-...-.|... +.+.+++   +++. ++++|.||+..+|...+.....  .+- ..+++  
T Consensus       214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv--  290 (459)
T PRK06931        214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDII--  290 (459)
T ss_pred             HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEE--
Confidence            2222     12466777764344456655 4544444   4554 9999999999988543322111  111 12233  


Q ss_pred             CCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +++|.++ .|+.+|.+++.++ ++.+..  ....|+.|+++.+++.+.|+
T Consensus       291 t~gK~l~-gG~Pi~av~~~~~-~~~~~~~~~~~T~~gnpla~aaala~L~  338 (459)
T PRK06931        291 VMSKAVG-GGLPLAVLGIKKE-FDAWQPGGHTGTFRGNQLAMATGLTTLK  338 (459)
T ss_pred             Eeccccc-CCcceeeeeeHHH-HhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            4799987 6889998777766 354432  22336789999888888875

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.46  E-value=3.7e-06  Score=76.66  Aligned_cols=163  Identities=14%  Similarity=0.068  Sum_probs=118.9

Q ss_pred             HHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCC-CChh----HHHHHHHCCCeEEEeeCCCCCC
Q 019868          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPP-TFTM----YEFDAAVNGAAVVKVPRKSDFS  204 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p-~y~~----~~~~~~~~G~~v~~v~~~~~~~  204 (334)
                      ..+-..+|.++|..+.+++++.+++-.+..++.+.+  .+|++||+++- +|+.    ....+...|..   +.  -...
T Consensus        79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~--~~~~  153 (407)
T COG3844          79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD--LEGV  153 (407)
T ss_pred             hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---cc--ceee
Confidence            457778888899999999999999999999988876  45888888764 4432    22334444432   11  1234


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK  283 (334)
                      +.+++++++++ +++.+|++++.|.-||+.++...+.++++. +++++.|-+++-..    ....+...+..+-|++-.|
T Consensus       154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~gaDfaigcsyK  228 (407)
T COG3844         154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGA----VPVDLHAAGADFAIGCSYK  228 (407)
T ss_pred             eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCC----cceeecccCCCeeeeeece
Confidence            56789999997 789999999999999999999999999988 99999999987433    2233345566688889999


Q ss_pred             hhc-ccccchheeEcCHHHHHHH
Q 019868          284 RAG-LAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       284 ~~g-l~G~R~G~l~~~~~~i~~l  305 (334)
                      .++ -|| -.+++.+.++..+..
T Consensus       229 YLNgGPG-apa~l~v~~~h~e~~  250 (407)
T COG3844         229 YLNGGPG-APAGLFVAPRHRERS  250 (407)
T ss_pred             eccCCCC-CceeEEecccccccc
Confidence            764 233 256677666555543

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=98.40  E-value=4.9e-06  Score=81.66  Aligned_cols=230  Identities=15%  Similarity=0.128  Sum_probs=128.2

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhcC--c----CCCCCCCcChHHHHHHHHH----hcCCCCCCEEEeCCHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~--~----~~~~Yp~~g~~~lr~~lA~----~~~~~~~~I~~t~G~~~  157 (334)
                      ..+++.++|+..+.  ..++ .+|++.+++++.  .    ....|+.....++-+.+++    ...-+-+.+++++++++
T Consensus        54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE  133 (464)
T TIGR00699        54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD  133 (464)
T ss_pred             eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence            45678899997763  3344 468888887651  1    1122333334456666544    33323368999999999


Q ss_pred             HHHHHHHHhcC--------------------------CC---CEEEEcCCCChhHHHHHHH-CCCe-----------EEE
Q 019868          158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGAA-----------VVK  196 (334)
Q Consensus       158 ~i~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~G~~-----------v~~  196 (334)
                      +.+.+++....                          +|   .+|+...-+|......+.. .|-.           +..
T Consensus       134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~  213 (464)
T TIGR00699       134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ  213 (464)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence            99999885410                          11   2688888888654433222 1211           111


Q ss_pred             eeCCC-C--CC-----------CCHHHHHHhccc--CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccC
Q 019868          197 VPRKS-D--FS-----------LNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       197 v~~~~-~--~~-----------~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDea  255 (334)
                      +|... .  +.           -+++.+++.+++  .++.+|++.-.....|...+    .++++++++. |+++|+||+
T Consensus       214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV  293 (464)
T TIGR00699       214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV  293 (464)
T ss_pred             cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence            22110 0  00           135566666642  35677777755666788886    5566666665 999999999


Q ss_pred             CcCccCCCCchhh--hcCC-CcEEEEcCCchhhcccccchheeEcCHHHHHHHH--HhcCCCCCcHHHHHHHHHHhc
Q 019868          256 YTEFSGLESRMEW--VKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       256 y~~~~~~~~~~~~--~~~~-~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~--~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+|...+.....  .+-. ..++  -+++|.+|-.    ||++..+ .+....  .....+..++++.+++.+.|+
T Consensus       294 ~tGfGrtG~~fa~e~~gv~~~PDi--~t~gK~lg~g----G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~  363 (464)
T TIGR00699       294 QTGVGATGKFWAHEHWNLDDPPDM--VTFSKKFQTA----GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQ  363 (464)
T ss_pred             eeCCCCCcchhHHHhcCCCCCCCE--EEehhhhccC----Cccccch-hccCCCCcccccCCCCCHHHHHHHHHHHH
Confidence            9887543322111  1110 1223  4589987523    4444432 211100  122336678888887776654

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.39  E-value=1.8e-05  Score=75.03  Aligned_cols=184  Identities=15%  Similarity=0.042  Sum_probs=118.0

Q ss_pred             CCCCCHHHHHHHhc-C-c----------CCCCCCCcC--hHHHHHHHHHhcCCCC-CCEEE-eCCHHHHHHHHHHHhcCC
Q 019868          106 PYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLDP  169 (334)
Q Consensus       106 ~~~~~~~v~~al~~-~-~----------~~~~Yp~~g--~~~lr~~lA~~~~~~~-~~I~~-t~G~~~~i~~~~~~l~~~  169 (334)
                      |-..|++|.+++++ + +          ..++-+...  ..+.++.+.++++++. .+|++ ..|++.++.++...|+.+
T Consensus        12 Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~   91 (364)
T PRK12462         12 PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRP   91 (364)
T ss_pred             CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCC
Confidence            34456788777663 2 1          112223321  4577777888889843 35655 556999999999999999


Q ss_pred             CCEEE--EcCCCChh-HHHHHHHCCCeEEEeeC--C--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          170 GDKIV--DCPPTFTM-YEFDAAVNGAAVVKVPR--K--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       170 gd~Vl--~~~p~y~~-~~~~~~~~G~~v~~v~~--~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ||+++  +..-.|.. +...++.+| ++..+..  .  .+..++++.+.  +. ++.+.|.+|+-.-.||..++     +
T Consensus        92 g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~-~d~~~v~~t~NETstGv~~~-----~  162 (364)
T PRK12462         92 GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD-ARAPFRHYVSNETVEGLQFP-----D  162 (364)
T ss_pred             CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC-CCCcEEEEccCCCCceEecC-----c
Confidence            99654  55555542 445566676 5544431  1  12345566652  22 35788888887889999986     2


Q ss_pred             HHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       243 l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      +.+. +.++|+|.+-.-+...-    .++++  .++..|.-|++|.+|  ++.++++++.+++..
T Consensus       163 ~~~~~~~llvvD~sS~~~s~pi----d~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~  219 (364)
T PRK12462        163 AAGLPDSPLIADMSSDFMSRPF----DVEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVP  219 (364)
T ss_pred             ccccCCCeEEEEcCchhhCCCC----ChHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhcc
Confidence            3333 78999999765433211    11222  588889999999777  678888988887544

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=98.33  E-value=2.2e-05  Score=79.15  Aligned_cols=89  Identities=16%  Similarity=0.274  Sum_probs=73.2

Q ss_pred             EEEEcCCCChhHHHHHHHCCC---eEEEeeCCCCCCCCHHHHHHhccc---CC--ceEEEEeCCCCccccCCcHHHHHHH
Q 019868          172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---EK--PKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~---~v~~v~~~~~~~~d~~~l~~~l~~---~~--~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++++.-.|.++...+...|+   .++.||.++++.+|+++|++.+++   .+  +-+|+.+-..-.+|.+=+.+++.+|
T Consensus       224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l  303 (608)
T TIGR03811       224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL  303 (608)
T ss_pred             EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence            588888889999999999998   589999888899999999998853   12  3345556778889999999999999


Q ss_pred             Hh---C-CC--eEEEccCCcCcc
Q 019868          244 LE---M-PI--LVVLDEAYTEFS  260 (334)
Q Consensus       244 ~~---~-~~--~lIvDeay~~~~  260 (334)
                      ++   . ++  ++.+|.||+++.
T Consensus       304 ~~~~~~~gl~~~lHVDAAyGG~~  326 (608)
T TIGR03811       304 RNKLMKEGIYFYLHVDAAYGGYG  326 (608)
T ss_pred             HHHHHHcCCceeEeeeccccchh
Confidence            83   3 65  799999999863

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.21  E-value=1.4e-05  Score=76.89  Aligned_cols=189  Identities=16%  Similarity=0.220  Sum_probs=108.6

Q ss_pred             cCCCCCCCCCCHHHHH-HHhcCcCCCCC----C--CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc-
Q 019868          100 IDANENPYGPPPEVRE-ALGQLKFPYIY----P--DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-  167 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~-al~~~~~~~~Y----p--~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~-  167 (334)
                      ++.|....-.|+.+.+ .+.+-.....|    |  +.|    ..++...++++.|.+..|.-+-.|+++....++.+.. 
T Consensus        70 iG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~  149 (429)
T PF02347_consen   70 IGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA  149 (429)
T ss_dssp             --CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH
T ss_pred             ccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh
Confidence            3455555556666666 34332332333    3  223    3478888999999876666777788777776655432 


Q ss_pred             --CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          168 --DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       168 --~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                        +++++|+++.-.|+.+....+.    .|.+++.++.+++...|         .+++.+|++.+||. .|.+-+.+++.
T Consensus       150 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~  219 (429)
T PF02347_consen  150 TKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD---------DDDTAAVMVQNPNT-FGVFEDIKEIA  219 (429)
T ss_dssp             HTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB----------STTEEEEEEESS-T-TSB--THHHHH
T ss_pred             cccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc---------ccCeEEEEeecCCC-CceEeeHHHHH
Confidence              3346999999999988875443    79999999865554555         36899999999986 89999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHH
Q 019868          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIE  303 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~  303 (334)
                      ++++. +.++++ .  .+...- ..+....+.+-+|+++. +|.||.|    |-.+|++.+.+++++
T Consensus       220 ~~~h~~gal~~~-~--ad~~aL-~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r  281 (429)
T PF02347_consen  220 DIAHAAGALVIV-G--ADPNAL-GGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVR  281 (429)
T ss_dssp             HHHHHTT-EEEE-C--GGCCGC-CTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGG
T ss_pred             HHHHHcCCEEEE-e--cCHHHH-hCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhh
Confidence            99886 777765 2  221110 11222234455677776 8877654    667888888776555

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.18  E-value=2.5e-05  Score=73.90  Aligned_cols=177  Identities=15%  Similarity=0.084  Sum_probs=108.0

Q ss_pred             cCCCCC-CCc---ChHHHHHHHHHhc----CCCCCCEEEeCCHHH---HHHHHHHHhcCCC----CEEEEcCCCChhHHH
Q 019868          121 KFPYIY-PDP---ESRRLRAALAKDS----GLESDHILVGCGADE---LIDLIMRCVLDPG----DKIVDCPPTFTMYEF  185 (334)
Q Consensus       121 ~~~~~Y-p~~---g~~~lr~~lA~~~----~~~~~~I~~t~G~~~---~i~~~~~~l~~~g----d~Vl~~~p~y~~~~~  185 (334)
                      ...+-| |..   |..++-..|.+|+    |.+.-.+....|++.   ++..+-......|    +.+++|+..|+....
T Consensus        93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA  172 (496)
T COG1003          93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA  172 (496)
T ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh
Confidence            334555 432   4445544555554    554433444455543   3322222222333    689999999999998


Q ss_pred             HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-CcHHHHHHHHhC-CCeEEEccCCcCccCCC
Q 019868          186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLE  263 (334)
Q Consensus       186 ~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~-~~~lIvDeay~~~~~~~  263 (334)
                      .+.+.|.+|+.|+.++++.+|+++|++++. +++.++.|++||- .|.. -+..++.+|++. |..|..|.+-..-.-+-
T Consensus       173 SAam~G~~VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~  250 (496)
T COG1003         173 SAAMAGFKVVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL  250 (496)
T ss_pred             hHhhcCceEEEEecCCCCCccHHHHHHHhc-cceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc
Confidence            999999999999998899999999999998 7899999999974 4443 133444444444 89999998764322111


Q ss_pred             CchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHH
Q 019868          264 SRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSII  302 (334)
Q Consensus       264 ~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i  302 (334)
                      ...   ++-+-+++=--+.|+|..|    |-..|=+.+...++
T Consensus       251 ~rP---Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~  290 (496)
T COG1003         251 ARP---GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLA  290 (496)
T ss_pred             ccc---cccccceEEeecccccccCCCCCCCCCCceehHhhcc
Confidence            111   1222234444577777443    45555555444433

>PRK08297 L-lysine aminotransferase; Provisional

Probab=98.15  E-value=0.00016  Score=70.92  Aligned_cols=227  Identities=15%  Similarity=0.132  Sum_probs=125.6

Q ss_pred             CCCCeeecCCC--CCCCC-CCHHHHH--HHhc-Cc-----CC--CCCCCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDAN--ENPYG-PPPEVRE--ALGQ-LK-----FP--YIYPDPESRRLRAALAKDS-GLESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~--al~~-~~-----~~--~~Yp~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~  158 (334)
                      +++.++|+..+  ...++ ..|++.+  ++++ +.     ..  ..|+.....+|-+.|++.. .-..+.|+++++++++
T Consensus        43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA  122 (443)
T PRK08297         43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA  122 (443)
T ss_pred             CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence            57778888665  33344 4577777  7664 21     11  1234444556777777765 2234689999999999


Q ss_pred             HHHHHHHhc--------CCC------CEEEEcCCCChhHHHHHHH-CCCeE-----------EEeeCCC-CC-----C--
Q 019868          159 IDLIMRCVL--------DPG------DKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS-DF-----S--  204 (334)
Q Consensus       159 i~~~~~~l~--------~~g------d~Vl~~~p~y~~~~~~~~~-~G~~v-----------~~v~~~~-~~-----~--  204 (334)
                      +..+++...        ..|      .+|+...-+|......+.. .|...           ..++... .+     .  
T Consensus       123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (443)
T PRK08297        123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE  202 (443)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence            999998541        012      5788888888655433332 22110           0011000 00     0  


Q ss_pred             -C------CHHHHHHhccc--CCceEEEEeCCCCccccC-CcHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--h
Q 019868          205 -L------NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--W  268 (334)
Q Consensus       205 -~------d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~  268 (334)
                       .      +++.+++.+.+  +++.+|++.-....-|.. .+.+.+++|   ++. |+++|.||++.+|...+....  .
T Consensus       203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~  282 (443)
T PRK08297        203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ  282 (443)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence             0      23445555542  456777776444445654 456655555   444 999999999998754332211  1


Q ss_pred             hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH-------HhcCCCCCcHHHHHHHHHHhc
Q 019868          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-------RAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       269 ~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~-------~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .+- ..+++  +|+|.++     +|.+++.+++.+.+.       .....++.++++.+++.++|+
T Consensus       283 ~gv-~PDiv--~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  340 (443)
T PRK08297        283 LGV-RPDIV--AFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILE  340 (443)
T ss_pred             cCC-CCCEE--Eeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHH
Confidence            111 22244  4899764     334444444332221       122346788999888888876

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.14  E-value=9.6e-05  Score=77.14  Aligned_cols=229  Identities=13%  Similarity=0.145  Sum_probs=131.7

Q ss_pred             CeeecCCC--CCCCC--CCHHHHHHHhc-CcC-CCC----CCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDAN--ENPYG--PPPEVREALGQ-LKF-PYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~~-~~~----Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+..+  ...++  ..|++.+++.+ +.. .+.    |......+|-+.|++..+-+ -+.|+++++++++++.+++
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK  445 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK  445 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence            56776554  23343  47889888875 322 111    12222345666666633311 3589999999999999887


Q ss_pred             HhcC---------------------CCCEEEEcCCCChhHHHHHHHCCC---------eE------EEeeCC--------
Q 019868          165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA---------AV------VKVPRK--------  200 (334)
Q Consensus       165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~G~---------~v------~~v~~~--------  200 (334)
                      .-.+                     ...+|+...-+|..-...+...+.         ..      ..++..        
T Consensus       446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~  525 (817)
T PLN02974        446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR  525 (817)
T ss_pred             HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence            4421                     124688888777543222222111         00      011100        


Q ss_pred             ------CC-----------CC-----CC------------HHHHHHhccc-------CCceEEEEeC-CCCccccCC-cH
Q 019868          201 ------SD-----------FS-----LN------------VELIADAVER-------EKPKCIFLTS-PNNPDGSII-ND  237 (334)
Q Consensus       201 ------~~-----------~~-----~d------------~~~l~~~l~~-------~~~~~i~l~~-p~NPtG~~~-~~  237 (334)
                            ..           |.     +|            .+.+++.+++       +++.+|++.- ...--|.+. +.
T Consensus       526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~  605 (817)
T PLN02974        526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP  605 (817)
T ss_pred             ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence                  00           00     00            2445555531       3456677664 256667776 45


Q ss_pred             HHHHH---HHhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHH----
Q 019868          238 EDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR----  307 (334)
Q Consensus       238 ~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~----  307 (334)
                      +.+++   +++. |+++|.||++.+|...+.....- ..-..++++  ++|.++ .| +.+|.+++.+++.+.+..    
T Consensus       606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~~  682 (817)
T PLN02974        606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLT-GGLVPLAATLATEEVFEAFRGPSKL  682 (817)
T ss_pred             HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe--eccccc-CCCCccEEEEEcHHHHHhhcccccc
Confidence            55444   4544 99999999999987544322210 011223443  899887 78 589999999999998752    


Q ss_pred             ----hcCCCCCcHHHHHHHHHHhc
Q 019868          308 ----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       308 ----~~~~~~~~~~~q~aa~~~L~  327 (334)
                          ....|+.++++.+++.+.|+
T Consensus       683 ~~~~hg~Ty~gnpl~cAaala~L~  706 (817)
T PLN02974        683 DALLHGHSYTAHPMGCAAAAKALQ  706 (817)
T ss_pred             CCcccCCCCCcCHHHHHHHHHHHH
Confidence                22347889999999877764

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=98.14  E-value=8.9e-05  Score=71.55  Aligned_cols=233  Identities=17%  Similarity=0.148  Sum_probs=138.2

Q ss_pred             CCCCeeecCCC--CCCCC-CCHHHHHHHhc-C---cCCCCC--CCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPYIY--PDPESRRLRAALAKDSG-LESDHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~~Y--p~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~~~  162 (334)
                      +++.++|--.+  .+.++ ..+++.+|+++ +   .+.+.+  ......+|-+.|++..+ -+-++|++++|++++++.+
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtA  121 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETA  121 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHH
Confidence            45556664333  12222 34778787765 2   222111  11126788888888887 4467999999999999999


Q ss_pred             HHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CC-------------CeEEEeeCCC--------CCC----CCHH
Q 019868          163 MRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS--------DFS----LNVE  208 (334)
Q Consensus       163 ~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G-------------~~v~~v~~~~--------~~~----~d~~  208 (334)
                      ++...       +|. .+++.-...|..-...+.. .|             ..+..++...        .+.    -..+
T Consensus       122 lKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~  201 (449)
T COG0161         122 LKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD  201 (449)
T ss_pred             HHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHH
Confidence            88542       232 3477777777533222211 11             1122222111        111    1256


Q ss_pred             HHHHhccc---CCceEEEEeCCC-CccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcC-CCcEEEE
Q 019868          209 LIADAVER---EKPKCIFLTSPN-NPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~---~~~~~i~l~~p~-NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~-~~~~i~i  278 (334)
                      +|++.+..   +++-++++.-.. --.|..++.    +++++||+. ++++|.||+-.+|...+.....-.. -..+++ 
T Consensus       202 ~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~-  280 (449)
T COG0161         202 ELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL-  280 (449)
T ss_pred             HHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee-
Confidence            67777654   345566665333 337776653    455667776 9999999999998865554332111 112233 


Q ss_pred             cCCchhhcccccchheeEcCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~------~~~~~~~~~q~aa~~~L~  327 (334)
                       +++|.+.-.=+.+|.+++.+++.+.+..- .      ..|+-++++.+++.+.|+
T Consensus       281 -~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~  335 (449)
T COG0161         281 -CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD  335 (449)
T ss_pred             -eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH
Confidence             47997652236777778899999988764 1      126789999999888664

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.12  E-value=2.4e-05  Score=72.96  Aligned_cols=200  Identities=17%  Similarity=0.122  Sum_probs=130.3

Q ss_pred             CCCCeeecCCC-CCCCCCCHHHHHHH----hcCcC----CCC-CCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDAN-ENPYGPPPEVREAL----GQLKF----PYI-YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al----~~~~~----~~~-Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +++++++|... -..+...+++.+..    ++...    ..+ |.+. -..++.+.||+++|++ +.|+...|- .++..
T Consensus        92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E-~aivYs~gF-~ti~S  169 (467)
T KOG1358|consen   92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE-DAIVYSYGF-STIES  169 (467)
T ss_pred             cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-ceeeecccc-chhhh
Confidence            35677777654 33555666666543    33211    122 4443 3568999999999964 567776665 57777


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----------C-ceEEEEeCCCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----------K-PKCIFLTSPNN  229 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----------~-~~~i~l~~p~N  229 (334)
                      ++.++++.||.|.+.+-.........+...-+++.+...     |.+++++.+.+.           . -+.|++..-.-
T Consensus       170 ~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~  244 (467)
T KOG1358|consen  170 AIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYA  244 (467)
T ss_pred             cchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeecc
Confidence            888899999999988766655555555555566666532     556666554311           1 23455557777


Q ss_pred             ccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC--Cc-h--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--SR-M--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~--~~-~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      +||.+.+..++.++... ...+|+||.|+...-+.  .. .  ..++..+-.++++|+.-+++-.|   ||.++..-++
T Consensus       245 N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~  320 (467)
T KOG1358|consen  245 NTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA  320 (467)
T ss_pred             CCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE
Confidence            89999999999999887 89999999997644221  11 0  11122355689999988877556   7877744443

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.08  E-value=0.00012  Score=76.85  Aligned_cols=190  Identities=17%  Similarity=0.144  Sum_probs=126.8

Q ss_pred             ecCCCCCCCCCCHHHHHHHhcC-cCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           99 KIDANENPYGPPPEVREALGQL-KFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      -++.|..+.-.|+.+.+.+.+. .....   | |.  .|    .-++++.++++.|.+..|.-+..+++++.+.++.+..
T Consensus        68 fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~  147 (939)
T TIGR00461        68 YIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFN  147 (939)
T ss_pred             cCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHH
Confidence            3466666676788887555432 21223   3 22  23    2478889999999998898898999998887776642


Q ss_pred             ---CCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          168 ---DPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       168 ---~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                         +++++|++++-.|+.+....+    ..|.+++.++        ++++++.+   ++.++++.+||. .|.+.+.+++
T Consensus       148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i  215 (939)
T TIGR00461       148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQL  215 (939)
T ss_pred             hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHH
Confidence               234899999999987775444    5899988873        44565554   467888888875 8999999999


Q ss_pred             HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHHHH
Q 019868          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       241 ~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~~l  305 (334)
                      .++++. +.+++++---.-+.    ......+.+-+|++++ +|.||+    .|...|++.+.+++.+.+
T Consensus       216 ~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaDi~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~l  280 (939)
T TIGR00461       216 IDALHSHKSLVSVAADLMALT----LLTPPGHYGADIVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKM  280 (939)
T ss_pred             HHHHHHcCCEEEEEechHHhC----CcCCHHHcCCcEEeeC-CCccCCCCCCCCCceeeeeecHhhHhhC
Confidence            888877 88888743221111    1122234455577654 344654    266688888877766643

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=97.93  E-value=0.0004  Score=65.43  Aligned_cols=240  Identities=18%  Similarity=0.229  Sum_probs=145.0

Q ss_pred             hCCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-CC---CCCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHH
Q 019868           90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP---YIYPDPESRRLRAALAKDSG-LESDHILVGCGADELID  160 (334)
Q Consensus        90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~---~~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~  160 (334)
                      +...++++||+..+  ..-++ ..|++.+++.+ +. ..   ..|-.-..-++.+.+.+.++ -..+.|++.+++++|..
T Consensus        51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne  130 (433)
T KOG1401|consen   51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE  130 (433)
T ss_pred             ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence            34456788998654  22222 36888888765 22 21   22211124456666666653 25689999999999999


Q ss_pred             HHHHHhcC---CC---C--EEEEcCCCChhHHHH-HHHCCCeEEEeeCC---CC----CCCCHHHHHHhcccCC--ceEE
Q 019868          161 LIMRCVLD---PG---D--KIVDCPPTFTMYEFD-AAVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI  222 (334)
Q Consensus       161 ~~~~~l~~---~g---d--~Vl~~~p~y~~~~~~-~~~~G~~v~~v~~~---~~----~~~d~~~l~~~l~~~~--~~~i  222 (334)
                      .+++.-.+   .+   +  +|+....+|..-..- +...+......|.+   .+    --=|+.++++.++.++  +.+|
T Consensus       131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV  210 (433)
T KOG1401|consen  131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV  210 (433)
T ss_pred             HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence            99885321   11   2  477777777543322 22222222222210   01    0115788888886543  6788


Q ss_pred             EEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchhee
Q 019868          223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       223 ~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      |+.--.---|... +++.+..|   ++. ++++|.||++.+|...+...  ..+.-   .--+.++.|.++ .|+.+|..
T Consensus       211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~---~PDI~t~aK~L~-gGlPigA~  286 (433)
T KOG1401|consen  211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV---TPDITTVAKPLG-GGLPIGAT  286 (433)
T ss_pred             EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc---CCcceeehhhcc-CCceeEEE
Confidence            8775555566655 45555444   444 99999999999876433211  11111   122446899987 88999999


Q ss_pred             EcCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHhc---Cchhhc
Q 019868          296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLE  333 (334)
Q Consensus       296 ~~~~~~i~~l~~~~~-----~~~~~~~~q~aa~~~L~---~~~~~~  333 (334)
                      ++++++.+.+..-..     .|+-|+++..++...|+   ++++++
T Consensus       287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k  332 (433)
T KOG1401|consen  287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLK  332 (433)
T ss_pred             eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHH
Confidence            999999998764333     37889998888877664   465543

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=97.92  E-value=0.00065  Score=66.40  Aligned_cols=228  Identities=14%  Similarity=0.129  Sum_probs=121.5

Q ss_pred             CCCCeeecCCC--CCCCC-CCHHHH--HHHhc-CcCC------C-CCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDAN--ENPYG-PPPEVR--EALGQ-LKFP------Y-IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~--~al~~-~~~~------~-~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~  158 (334)
                      +++.+||+..+  ...++ ..|++.  +++.+ +...      . .+......++-+.|++..+ -..+.++++++++++
T Consensus        36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA  115 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA  115 (431)
T ss_pred             CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence            67778888665  33344 457776  66654 2211      1 1222223455555666542 234689999999999


Q ss_pred             HHHHHHHhc----------C----CCCEEEEcCCCChhHHHHHH-HCCCe-EE----------E--eeC-----C-CCCC
Q 019868          159 IDLIMRCVL----------D----PGDKIVDCPPTFTMYEFDAA-VNGAA-VV----------K--VPR-----K-SDFS  204 (334)
Q Consensus       159 i~~~~~~l~----------~----~gd~Vl~~~p~y~~~~~~~~-~~G~~-v~----------~--v~~-----~-~~~~  204 (334)
                      +..+++.-.          +    ++.+|+...-+|......+. ..|.. ..          .  .|.     . ++..
T Consensus       116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  195 (431)
T TIGR03251       116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD  195 (431)
T ss_pred             HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence            999988442          0    13678888887865443322 22211 00          0  110     0 0000


Q ss_pred             -------CCHHHHHHhcc--cCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--h
Q 019868          205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--W  268 (334)
Q Consensus       205 -------~d~~~l~~~l~--~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~  268 (334)
                             -+++++++.+.  ..++.+|++.-...-.|... +.+.+++|.+   . |+++|+||++.+|...+....  .
T Consensus       196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~  275 (431)
T TIGR03251       196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ  275 (431)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence                   12344455553  24677888775555567654 5555555544   4 999999999998764332211  1


Q ss_pred             hcCCCcEEEEcCCchhhcccccchheeEcCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHhc
Q 019868          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       269 ~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~--~~i~~l~----~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .+- ...++  +++|.+  +.  .|++...+  ++.+...    .....++.++++.+++.++|+
T Consensus       276 ~gv-~PDi~--~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  333 (431)
T TIGR03251       276 LGV-QPDIV--AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILE  333 (431)
T ss_pred             cCC-CCCEE--EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence            111 22244  378975  22  24444332  2222111    122336778888888887775

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=97.89  E-value=1.3e-05  Score=75.03  Aligned_cols=187  Identities=17%  Similarity=0.132  Sum_probs=52.4

Q ss_pred             HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC---h---hHHHHHHHCCCeEEEeeCCCCCCCC
Q 019868          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---T---MYEFDAAVNGAAVVKVPRKSDFSLN  206 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y---~---~~~~~~~~~G~~v~~v~~~~~~~~d  206 (334)
                      .+.+.++++.|.  +.-+++++...++.+++.++. +|.+|++..-.-   +   ......+..|++++.|-..+  .-.
T Consensus        51 ~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t~  125 (367)
T PF03841_consen   51 HVEELLCELTGA--EAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RTH  125 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccc--ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc--ccc
Confidence            455556666664  466777777788888888765 566777665322   1   14456677899999887432  345


Q ss_pred             HHHHHHhcccCCceEEEEeCCCCcc--c--cCCcHHHHHHHHhC-CCeEEEccCCcCccC-------CCCchhhhcCCCc
Q 019868          207 VELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PILVVLDEAYTEFSG-------LESRMEWVKKHDN  274 (334)
Q Consensus       207 ~~~l~~~l~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-------~~~~~~~~~~~~~  274 (334)
                      ++++++++. +++.+++-.+++|-.  |  ...+.+++.++++. ++++|+|-.-..+.+       .++.....-..+-
T Consensus       126 ~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~Ga  204 (367)
T PF03841_consen  126 LSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGA  204 (367)
T ss_dssp             ------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-
T ss_pred             ccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCC
Confidence            788999997 788888777776653  2  14588999999987 999999987633221       1122222223456


Q ss_pred             EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      ++++.|-.|.+|  |...|.+++.+++|+++++..-  .+-+.....++..+.|+
T Consensus       205 DlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~  257 (367)
T PF03841_consen  205 DLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLR  257 (367)
T ss_dssp             SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHH
T ss_pred             CEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHH
Confidence            799999999876  7789999999999999876432  35667666666666554

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=97.79  E-value=0.00018  Score=65.85  Aligned_cols=226  Identities=15%  Similarity=0.150  Sum_probs=137.1

Q ss_pred             hCCCCCCeeecCCCCCC---CCCCHHHHHHHhcC-cC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           90 LGRKPEDIVKIDANENP---YGPPPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        90 ~~~~~~~~i~l~~~~~~---~~~~~~v~~al~~~-~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +..++...+||=.+...   --..|.+.+++++. +.    .+.+-+.-..++.+-+.++++.+  -|+.++-+.|+...
T Consensus        54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~--kvlpmnTGaEa~Et  131 (427)
T KOG1402|consen   54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYD--KVLPMNTGAEAVET  131 (427)
T ss_pred             ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcc--eeeecccchhHHHH
Confidence            34456667776444322   23568899998763 21    11122233567888888888854  57777766888888


Q ss_pred             HHHHhc------C--C-CCE-EEEcCCCChhHHHH----------HHHCC----CeEEEeeCCCCCCCCHHHHHHhcccC
Q 019868          162 IMRCVL------D--P-GDK-IVDCPPTFTMYEFD----------AAVNG----AAVVKVPRKSDFSLNVELIADAVERE  217 (334)
Q Consensus       162 ~~~~l~------~--~-gd~-Vl~~~p~y~~~~~~----------~~~~G----~~v~~v~~~~~~~~d~~~l~~~l~~~  217 (334)
                      +++...      +  | ... |+.....|..-...          .+.+|    ..+..+|.     =|.++++.+++.+
T Consensus       132 a~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~eale~~l~~~  206 (427)
T KOG1402|consen  132 ACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDAEALEVALKSP  206 (427)
T ss_pred             HHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCHHHHHHHhcCC
Confidence            877321      1  3 223 33333333211100          00011    01112221     1689999999877


Q ss_pred             CceEEEEeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCc---EEEEcCCchhhcccc
Q 019868          218 KPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAG  289 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~---~i~i~S~SK~~gl~G  289 (334)
                      +..++++.--+-.-|.+.+.    +..++||.. ++++|.||++.++...+..+..  +++|   .+++  |.|+++ .|
T Consensus       207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~--d~env~PDivi--lgKalS-GG  281 (427)
T KOG1402|consen  207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLAC--DYENVRPDIVI--LGKALS-GG  281 (427)
T ss_pred             CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEe--ehhhcCCCeEE--Eecccc-CC
Confidence            77888877667888887764    455667766 9999999999988765543322  2222   2444  789876 33


Q ss_pred             -cchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          290 -LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       290 -~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                       +.+..+++++++...+..-  ...|.-|+++.+++.++|+
T Consensus       282 ~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAale  322 (427)
T KOG1402|consen  282 VYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALE  322 (427)
T ss_pred             eeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHH
Confidence             5667777888887765432  2347889999999988885

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.73  E-value=0.0022  Score=60.87  Aligned_cols=193  Identities=15%  Similarity=0.109  Sum_probs=129.3

Q ss_pred             ecCCCCCCCCCCHHHH-HHHhcCcCCCCC----CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           99 KIDANENPYGPPPEVR-EALGQLKFPYIY----PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~-~al~~~~~~~~Y----p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      -++.|..+.-.|+.+. ..+.+-.....|    |.  .|    .-++...++++.|.+-.|--+--|+|.+-+..+.+..
T Consensus        79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r  158 (450)
T COG0403          79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR  158 (450)
T ss_pred             hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence            4566777777777776 445543332334    32  23    2367888889999887777777888877777766553


Q ss_pred             ---CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc-cCCcHHH
Q 019868          168 ---DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDED  239 (334)
Q Consensus       168 ---~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG-~~~~~~~  239 (334)
                         .+..+++++.-.|+.+....+-    .|.+++.++.+     |++++++. ....+-++++..|+ -.| ...+...
T Consensus       159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~  231 (450)
T COG0403         159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPN-TFGIVEEDLRA  231 (450)
T ss_pred             hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCC-CCCccchhHHH
Confidence               2358999999999988776654    56777777643     77888887 54578899999998 477 5556888


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHH
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIE  303 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~  303 (334)
                      +.+.++. +.++++   +.+... -..+...++.+.+|++++..- ||+    .|..+||..+.++..+
T Consensus       232 l~~~~h~~~al~~v---~aDpla-L~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R  295 (450)
T COG0403         232 LIEAAHSAGALVIV---AADPLA-LGLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKR  295 (450)
T ss_pred             HHHHHhhcCCEEEE---EechhH-hhccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhh
Confidence            8888876 655553   111100 012222345667799988766 444    4788899988877655

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=97.69  E-value=0.00025  Score=65.87  Aligned_cols=191  Identities=20%  Similarity=0.171  Sum_probs=117.1

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC------cC----hHHHHH-HHHHhcCCCCC----CEEEeCCHHHHH
Q 019868           98 VKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PE----SRRLRA-ALAKDSGLESD----HILVGCGADELI  159 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~------~g----~~~lr~-~lA~~~~~~~~----~I~~t~G~~~~i  159 (334)
                      |.|=..||-  .+..+.+|+.. +  .+..+||.      ..    .+.|.+ ..-+.++++|+    ||..-+|+. +.
T Consensus        43 ieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN  119 (477)
T KOG2467|consen   43 IELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN  119 (477)
T ss_pred             eeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence            555455553  34678888876 2  23344442      11    122222 22345688776    677778876 55


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChh-----HHHHHHHCCCeEEEe-----eC-CCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTM-----YEFDAAVNGAAVVKV-----PR-KSDFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~-----~~~~~~~~G~~v~~v-----~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      ..+..+++.|+|+|.-.+.-.+.     |..-.+...+.-+++     .. ..++-+|.|.|++....-++|+|+.-.-.
T Consensus       120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~Sa  199 (477)
T KOG2467|consen  120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSA  199 (477)
T ss_pred             hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecccc
Confidence            56777799999999855533221     111111122222222     12 25567999999988766789988864333


Q ss_pred             CccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          229 NPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       229 NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                        .-..++-.++++|++. +.++++|.++. ++...+-...-+.  -..|+..+..|.  +-|.|.|.+.-
T Consensus       200 --Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKs--LRGPRg~mIFy  264 (477)
T KOG2467|consen  200 --YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKS--LRGPRGAMIFY  264 (477)
T ss_pred             --chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc--ccceeecccccc--ccCCcceeEEE
Confidence              3377899999999998 99999999984 3432221111111  124889999996  57999998875

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=97.51  E-value=0.00062  Score=65.12  Aligned_cols=163  Identities=18%  Similarity=0.137  Sum_probs=115.7

Q ss_pred             HHHHHHHHhcCCCCCCE-EEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CC
Q 019868          133 RLRAALAKDSGLESDHI-LVGCGADELIDLIMRCVL----D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD  202 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~~I-~~t~G~~~~i~~~~~~l~----~-~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~  202 (334)
                      +.-.-++.+++.+++.+ ..|.|+++++.+..+...    . .|   ..++++...+..+...++..+.++..||.+ .+
T Consensus       124 ~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~  203 (491)
T KOG1383|consen  124 ECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGD  203 (491)
T ss_pred             HHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccc
Confidence            44455566676554422 347899999766666542    1 23   357777778889999999999999999965 78


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCC--CCchhhhc--CCCcEE
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRMEWVK--KHDNLI  276 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~--~~~~~~~~--~~~~~i  276 (334)
                      |.+|+.++.+.++ +++.+++..-|+-|+|..=+.+++.++.-.  ++.+.+|.+-+.|.-.  .......+  ...-.=
T Consensus       204 ~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~S  282 (491)
T KOG1383|consen  204 YRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTS  282 (491)
T ss_pred             eEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCcee
Confidence            9999999999998 799999999999999999999998887643  9999999999888741  11111111  111112


Q ss_pred             EEcCCchhhcccccchheeEc
Q 019868          277 VLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      +--+-+| ||+.--.+||++-
T Consensus       283 isa~~HK-YGl~~~G~~~vl~  302 (491)
T KOG1383|consen  283 ISADGHK-YGLAPAGSSWVLY  302 (491)
T ss_pred             Eeeccce-eeeeecCcEEEEE
Confidence            2233466 6776666888865

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=96.63  E-value=0.025  Score=53.79  Aligned_cols=165  Identities=15%  Similarity=0.032  Sum_probs=98.2

Q ss_pred             hcCCC-CCCEEEeCCHHHHHHHH-HHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHh
Q 019868          141 DSGLE-SDHILVGCGADELIDLI-MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADA  213 (334)
Q Consensus       141 ~~~~~-~~~I~~t~G~~~~i~~~-~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~  213 (334)
                      ..|+. ....++.+.+|..--.+ +.++.  ..++.|+.+.-.+-.-...+..+|.+++.|+.   .+....|++.+++.
T Consensus        68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~  147 (389)
T PF05889_consen   68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAK  147 (389)
T ss_dssp             HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHH
T ss_pred             HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHH
Confidence            34764 24566766665433332 33332  46789998887776666777889999999982   23334568888887


Q ss_pred             ccc--CCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhc---C-CCcEEEEcCCchhh
Q 019868          214 VER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK---K-HDNLIVLRTFSKRA  285 (334)
Q Consensus       214 l~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~---~-~~~~i~i~S~SK~~  285 (334)
                      +++  .+..+.+++++.--.|...| .+++.+|++. ++..|+-.||.-=..  ..+..+.   . .--.+++.|.-|+|
T Consensus       148 i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF  225 (389)
T PF05889_consen  148 IEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNF  225 (389)
T ss_dssp             HHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHH
T ss_pred             HHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCE
Confidence            753  34567777777666777777 8888888887 999999999974211  1111111   1 12238999999999


Q ss_pred             cccccchheeEc-CHHHHHHHHHh
Q 019868          286 GLAGLRVGYGAF-PLSIIEYLWRA  308 (334)
Q Consensus       286 gl~G~R~G~l~~-~~~~i~~l~~~  308 (334)
                      - -+..-+.+.+ ++..+..+.+.
T Consensus       226 ~-VPvGgai~As~~~~~i~~vs~~  248 (389)
T PF05889_consen  226 M-VPVGGAIMASFDPSGILAVSKE  248 (389)
T ss_dssp             C-EESSHEEEEESSHHHHHHHHHT
T ss_pred             E-ecCCCcEEEecCHHHHHHHHHH
Confidence            4 4433444444 56777776543

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=96.63  E-value=0.0029  Score=57.46  Aligned_cols=101  Identities=17%  Similarity=0.124  Sum_probs=73.6

Q ss_pred             CCCCccccCCcH-HHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          226 SPNNPDGSIIND-EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       226 ~p~NPtG~~~~~-~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +-..=-|+++++ ...+++++.    |.+.|.||+..+|..-++.......++-+--+-++.|-+| .|..++.++..++
T Consensus       217 slQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vattke  295 (452)
T KOG1403|consen  217 SLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVATTKE  295 (452)
T ss_pred             HHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC-CCCeeeEEeccHH
Confidence            444556777754 445556553    8899999999999866665555555554444667899998 9999999999999


Q ss_pred             HHHHHHHhcC----CCCCcHHHHHHHHHHhc
Q 019868          301 IIEYLWRAKQ----PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       301 ~i~~l~~~~~----~~~~~~~~q~aa~~~L~  327 (334)
                      +.+++.....    .|+-|+.+.+++.++|+
T Consensus       296 IA~Af~atgv~YFNTyGGnPVsCAv~laVm~  326 (452)
T KOG1403|consen  296 IAQAFHATGVEYFNTYGGNPVSCAVGLAVMR  326 (452)
T ss_pred             HHHHhccccceehhccCCCchhHHHHHHHHH
Confidence            9998875332    35678888888877764

>PRK12566 glycine dehydrogenase; Provisional

Probab=96.48  E-value=0.12  Score=54.75  Aligned_cols=190  Identities=14%  Similarity=0.057  Sum_probs=116.3

Q ss_pred             eecCCCCCCCCCCHHHHH-HHhcCcCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVRE-ALGQLKFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~-al~~~~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      .-++.|..+.-.|+.+.+ .+.+-.....   | |.  .|    .-++...++++.|.+-.|--+-.|++.+-+.++.+.
T Consensus        82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~  161 (954)
T PRK12566         82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK  161 (954)
T ss_pred             ccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHH
Confidence            455667777767777744 4444322233   3 32  23    247888899999988666666667776655444433


Q ss_pred             c-C--CCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          167 L-D--PGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       167 ~-~--~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      . .  +..+|++++-.|+.+....+    ..|++++.           +++++.+. .++-++++.+||. .|.+.+.++
T Consensus       162 ~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~  228 (954)
T PRK12566        162 RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRP  228 (954)
T ss_pred             HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC-CCEEEEEEECCCC-ceEEccHHH
Confidence            2 2  24689999999988776554    36777664           22333443 4678899999974 899989889


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC---CchhhcccccchheeEcCHHHHHH
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT---FSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S---~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      +.++++. +.++|+ .+. .++-  ..+...++.+.+|++++   |.=-+|..|--.||+.+.+++.+.
T Consensus       229 i~~~~h~~gal~~~-~~d-~laL--~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~  293 (954)
T PRK12566        229 LIDQLHGQQALACV-AAD-LLSL--LVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRA  293 (954)
T ss_pred             HHHHHHHcCCEEEE-EeC-HHHH--hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhh
Confidence            9888876 666442 221 1110  11222345566677763   233334447778999888776653

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=96.17  E-value=0.037  Score=51.72  Aligned_cols=130  Identities=18%  Similarity=0.247  Sum_probs=90.5

Q ss_pred             CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-----CCCEEEEcCCCC-hhHHHHHHHCCCeEEE
Q 019868          124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-----PGDKIVDCPPTF-TMYEFDAAVNGAAVVK  196 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-----~gd~Vl~~~p~y-~~~~~~~~~~G~~v~~  196 (334)
                      ..| .+.+...|++++.+.+|.  +.++.|.-+..+=+.++..+++     ||.+.++++..| .......+..|+.++-
T Consensus        73 EAYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n  150 (471)
T COG3033          73 EAYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRN  150 (471)
T ss_pred             hhhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccc
Confidence            446 556789999999999996  4777777666666666665554     454555555555 4455566678988877


Q ss_pred             eeCCC----------CCCCCHHHHHHhccc---CCceEEEEe-CCCCccccCCcHHHHHHHHh---C-CCeEEEccC
Q 019868          197 VPRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEA  255 (334)
Q Consensus       197 v~~~~----------~~~~d~~~l~~~l~~---~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~---~-~~~lIvDea  255 (334)
                      ++.++          .+.+|++.+++.+++   ++...|+++ ..|.--|+..+.+-+++..+   . ++.++.|.+
T Consensus       151 ~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~  227 (471)
T COG3033         151 VYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAA  227 (471)
T ss_pred             ccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehh
Confidence            66221          246899999999864   345566666 55667788888777766554   4 999999986

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=96.12  E-value=0.093  Score=50.13  Aligned_cols=165  Identities=16%  Similarity=0.067  Sum_probs=105.7

Q ss_pred             HHHHHHhcCCCC--CCEEEeCCHHHHHHHHHHHhcC--C-----C-----CE-EEEcCCCChhHHHHHHHCC---CeEEE
Q 019868          135 RAALAKDSGLES--DHILVGCGADELIDLIMRCVLD--P-----G-----DK-IVDCPPTFTMYEFDAAVNG---AAVVK  196 (334)
Q Consensus       135 r~~lA~~~~~~~--~~I~~t~G~~~~i~~~~~~l~~--~-----g-----d~-Vl~~~p~y~~~~~~~~~~G---~~v~~  196 (334)
                      -..+.+..|.+.  |.|+.-.|+...+..+..+-.+  |     |     +- ..+++-+|.+....+..+|   -.++.
T Consensus       147 l~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~  226 (510)
T KOG0629|consen  147 LAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIK  226 (510)
T ss_pred             HHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEE
Confidence            333334445544  5666666666666555443211  1     2     23 3455667778888888888   57888


Q ss_pred             eeCCCCCCCCHHHHHHhcccCCce----EEE-EeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhh
Q 019868          197 VPRKSDFSLNVELIADAVEREKPK----CIF-LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWV  269 (334)
Q Consensus       197 v~~~~~~~~d~~~l~~~l~~~~~~----~i~-l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~  269 (334)
                      |+.++.+.+++++||+.+...+.+    .++ .+.-....|..=|.+.+.++++. ++|+.+|.+|.+..- .......+
T Consensus       227 v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl  306 (510)
T KOG0629|consen  227 VKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKL  306 (510)
T ss_pred             ecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhc
Confidence            888888899999999987533322    222 23446788999999999999988 999999999987321 11111122


Q ss_pred             cC-CCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          270 KK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       270 ~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      .. ...--+..+..|..| +.+.++..+...+
T Consensus       307 ~Giera~SvtwnpHK~~g-aplqCsa~l~r~~  337 (510)
T KOG0629|consen  307 TGIERANSVTWNPHKLMG-APLQCSAFLTREE  337 (510)
T ss_pred             cCccccCceeecHHHhhc-CcchhhHHHHHHH
Confidence            11 111245567899888 6788887776543

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=95.13  E-value=0.24  Score=47.84  Aligned_cols=133  Identities=13%  Similarity=0.220  Sum_probs=88.4

Q ss_pred             CCcChHHHHHHHHHhc----CC----------CCCCEEEeCCHHHHHHHHHHHh------cCCC------------CEEE
Q 019868          127 PDPESRRLRAALAKDS----GL----------ESDHILVGCGADELIDLIMRCV------LDPG------------DKIV  174 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~----~~----------~~~~I~~t~G~~~~i~~~~~~l------~~~g------------d~Vl  174 (334)
                      ..|...+|..-+.+|+    ++          +.--|+-++.+...+-.++.+-      .+.+            =.+.
T Consensus       107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y  186 (511)
T KOG0628|consen  107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY  186 (511)
T ss_pred             cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence            4455677776666664    22          2234666666555555555432      1222            1456


Q ss_pred             EcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCc----eEEEEeCCCCccccCC--cHHHHHHHHhC-C
Q 019868          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP----KCIFLTSPNNPDGSII--NDEDLLKILEM-P  247 (334)
Q Consensus       175 ~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~----~~i~l~~p~NPtG~~~--~~~~l~~l~~~-~  247 (334)
                      ..+-.+.+.+..+...|.+...++.+.+|.++.+.|.++++++..    -.+++.+.. -||.+.  ..+++-.+++. +
T Consensus       187 ~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~ca~D~l~elg~Vc~~~g  265 (511)
T KOG0628|consen  187 CSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSSCAFDELEELGPVCREEG  265 (511)
T ss_pred             ecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-CccccccccHHHhcchhhhcC
Confidence            778899999999999999999999888999999999999975332    233333333 244333  46667777776 9


Q ss_pred             CeEEEccCCcCcc
Q 019868          248 ILVVLDEAYTEFS  260 (334)
Q Consensus       248 ~~lIvDeay~~~~  260 (334)
                      +|+.+|.+|++-+
T Consensus       266 lWLHVDAAYAGsa  278 (511)
T KOG0628|consen  266 LWLHVDAAYAGSA  278 (511)
T ss_pred             EEEEeehhhcccc
Confidence            9999999999643

>PLN02672 methionine S-methyltransferase

Probab=94.22  E-value=0.5  Score=51.14  Aligned_cols=182  Identities=15%  Similarity=0.214  Sum_probs=114.0

Q ss_pred             CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHHh------cCCCCEEEEcCCCChhHHHHHHHCC---
Q 019868          127 PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCV------LDPGDKIVDCPPTFTMYEFDAAVNG---  191 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~~~~G---  191 (334)
                      |..|...+|..+|.++      .+.+++|++.+.-..+|..+++.+      ++.+..-.++ +.|   .......|   
T Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~  499 (1082)
T PLN02672        424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKW---LTSLAIENATS  499 (1082)
T ss_pred             CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHH---HhHhhhhcccc
Confidence            5668999999999876      468999999999999998888843      2333222221 122   22111222   


Q ss_pred             -------CeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccC-CcCc
Q 019868          192 -------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEA-YTEF  259 (334)
Q Consensus       192 -------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDea-y~~~  259 (334)
                             ++|+.-|..      .+.+.+.+++-++++|+..-..   +-..+...++.|++.    |..++.|+. |.++
T Consensus       500 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (1082)
T PLN02672        500 DSKSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLEL  570 (1082)
T ss_pred             cCccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheee
Confidence                   233333321      1355666665678888866333   334455556666543    999999985 5555


Q ss_pred             cCCCCc---hhhh---cCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHH
Q 019868          260 SGLESR---MEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVA  321 (334)
Q Consensus       260 ~~~~~~---~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~a  321 (334)
                      +..+..   ...+   ....+..++.++-|+--.+.+-+.+++. ++.+...+.+....  .+.+.++|+-
T Consensus       571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (1082)
T PLN02672        571 SSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQFY  641 (1082)
T ss_pred             ccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHHH
Confidence            543322   2222   2356778899999987778999999997 66777777766554  3455566653

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=93.41  E-value=1.2  Score=45.14  Aligned_cols=153  Identities=18%  Similarity=0.157  Sum_probs=93.7

Q ss_pred             ChHHHHHHHHHhc----CCCCCCEEE--eCCH---HHHHHHHHHHhcCCC----CEEEEcCCCChhHHHHHHHCCCeEEE
Q 019868          130 ESRRLRAALAKDS----GLESDHILV--GCGA---DELIDLIMRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVK  196 (334)
Q Consensus       130 g~~~lr~~lA~~~----~~~~~~I~~--t~G~---~~~i~~~~~~l~~~g----d~Vl~~~p~y~~~~~~~~~~G~~v~~  196 (334)
                      |+.++-+.+-+++    |.  |++.+  -+|+   -.++..+-..+..+|    ...++|...++.....++++|.++++
T Consensus       579 GY~~lf~~Le~~Lc~iTG~--D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmkvvp  656 (1001)
T KOG2040|consen  579 GYQQLFTELEKDLCEITGF--DSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVP  656 (1001)
T ss_pred             hHHHHHHHHHHHhheeecc--cceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEE
Confidence            4555555555444    44  34544  3333   334444433333444    34578888999888889999999999


Q ss_pred             eeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccC-CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCC
Q 019868          197 VPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKH  272 (334)
Q Consensus       197 v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~  272 (334)
                      |..+.++.+|..+|.++.++  ++-.++.++.|.. -|.. -+.+++.++++. |.-|..|.+-..-.-+   +-..++.
T Consensus       657 V~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG---lc~pGd~  732 (1001)
T KOG2040|consen  657 VGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG---LCRPGDI  732 (1001)
T ss_pred             eeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceec---ccCCccc
Confidence            99888899999999887754  3456888888864 2332 245666666655 8888888875431100   0011233


Q ss_pred             CcEEEEcCCchhhccc
Q 019868          273 DNLIVLRTFSKRAGLA  288 (334)
Q Consensus       273 ~~~i~i~S~SK~~gl~  288 (334)
                      +..+.=--+.|+|.+|
T Consensus       733 GaDV~HLNLHKTFcIP  748 (1001)
T KOG2040|consen  733 GADVCHLNLHKTFCIP  748 (1001)
T ss_pred             cccceeecccceeeec
Confidence            3334444577887554

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=93.07  E-value=0.29  Score=45.01  Aligned_cols=165  Identities=15%  Similarity=0.066  Sum_probs=113.0

Q ss_pred             ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCC---CEEEEcCCCCh----hHHHHHHHCCCeEE----Eee
Q 019868          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAVV----KVP  198 (334)
Q Consensus       130 g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~G~~v~----~v~  198 (334)
                      +.+.....+++..|...++|.+.+.-+-.+..++.++.+|-   -+|+...-.|+    .....++..|..+.    .+.
T Consensus       112 ~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ie  191 (465)
T KOG3846|consen  112 IDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIE  191 (465)
T ss_pred             cchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEec
Confidence            45677788889999999999999999999999999998775   36787776665    34566777887643    232


Q ss_pred             -CCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCc
Q 019868          199 -RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN  274 (334)
Q Consensus       199 -~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~  274 (334)
                       .+....+-.+++.+.++.  +...+|+++..+.-||+.++...+...-+. +++|=.|-+++-.    ...-.+.+++-
T Consensus       192 PREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg----NVpL~LHdWgV  267 (465)
T KOG3846|consen  192 PREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG----NVPLQLHDWGV  267 (465)
T ss_pred             ccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc----CCceEEeecCC
Confidence             223345667777777753  235567777889999999999998866555 8888888887632    11122234555


Q ss_pred             EEEEcCCchhhccccc-chheeEcCH
Q 019868          275 LIVLRTFSKRAGLAGL-RVGYGAFPL  299 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~-R~G~l~~~~  299 (334)
                      .+-+.---| |+.+|. .+|-+.+.+
T Consensus       268 DFACWCSYK-YlnaGaGgIgGlFvHe  292 (465)
T KOG3846|consen  268 DFACWCSYK-YLNAGAGGIGGLFVHE  292 (465)
T ss_pred             ceEEEeeec-ccccCCCccceeeeeh
Confidence            566666677 334442 245555443

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=92.63  E-value=1.5  Score=41.40  Aligned_cols=164  Identities=12%  Similarity=0.073  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHhcCCCCC-CEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH-HHHHHCCC--eEEEee-CCC--C
Q 019868          131 SRRLRAALAKDSGLESD-HILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKS--D  202 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~-~I~~-t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~G~--~v~~v~-~~~--~  202 (334)
                      ..+.++.+.++++++.+ +|++ -.|++....++...|+.+...-.+..-.|.... ..++..+-  ++.... ...  +
T Consensus        52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~  131 (365)
T COG1932          52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYG  131 (365)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCcc
Confidence            45677778888998655 5555 457788888888888866543133344565332 22333443  222221 112  2


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (334)
                      .-++++.+.  +. ++..-|.+|.-+--+|.-++.  ...+.. +.++|+|..-.-++..-      +-..-.++-.|.-
T Consensus       132 ~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~v~~--~p~~~~-~~~~v~D~SS~ilsr~i------Dvsk~dviyagaQ  199 (365)
T COG1932         132 SIPDLSKWD--FS-DNDAYVHFCWNETISGVEVPE--LPDIGS-DGLLVADASSAILSRPI------DVSKYDVIYAGAQ  199 (365)
T ss_pred             CCCChhhcc--cC-CCccEEEEecCCcccceEccC--CCCCCC-CceEEEecccHHhcCCC------ChhHcceEEEehh
Confidence            234444433  22 223336666544567776651  111111 37788888654333211      1112238888999


Q ss_pred             hhhcccccchheeEcCHHHHHHHHHh
Q 019868          283 KRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       283 K~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      |++|..|  ++.+++.+++++++...
T Consensus       200 KnlGpaG--ltvvIvr~~~l~r~~~~  223 (365)
T COG1932         200 KNLGPAG--LTVVIVRPDLLERAESY  223 (365)
T ss_pred             hccCccc--eEEEEEcHHHHhccccc
Confidence            9999888  89999999999988665

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=83.96  E-value=4.9  Score=36.40  Aligned_cols=119  Identities=13%  Similarity=0.110  Sum_probs=68.6

Q ss_pred             HHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC-----cHHHHHHHHhC-CCeEEEccCCcC
Q 019868          188 AVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII-----NDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       188 ~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~-----~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      -.+|.+++.+..   .+...-|++.+++.+++.....|+..+  .-|....     ..|++..|+.. ++.-|+.++|..
T Consensus       121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~--sttscfapr~pd~leaiaaica~~diphivnnaygl  198 (432)
T KOG3843|consen  121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIH--STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL  198 (432)
T ss_pred             HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEe--ecccccCCCCCchHHHHHHHHHccCchhhhcccccc
Confidence            347998887762   233445889999988765666555432  1122222     34556666655 888899999975


Q ss_pred             ccCCC-CchhhhcCCCc-EEEEcCCchhhcccccchheeEc--CHHHHHHHHHhcC
Q 019868          259 FSGLE-SRMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRAKQ  310 (334)
Q Consensus       259 ~~~~~-~~~~~~~~~~~-~i~i~S~SK~~gl~G~R~G~l~~--~~~~i~~l~~~~~  310 (334)
                      -..+- .........++ ..++.|+-|+|-.|=  .|.+++  ++..|+.+.+.-.
T Consensus       199 qsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~yp  252 (432)
T KOG3843|consen  199 QSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYP  252 (432)
T ss_pred             chHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCC
Confidence            33210 01111111222 367889999996552  144443  6778887766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	334
3get_A	365	Crystal Structure Of Putative Histidinol-Phosphate		1e-30
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		6e-30
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		5e-29
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		4e-28
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		8e-26
3hdo_A	360	Crystal Structure Of A Histidinol-Phosphate Aminotr		7e-24
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		4e-23
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		4e-23
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		8e-22
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		8e-21
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		8e-21
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		4e-20
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		4e-18
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		4e-13
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		4e-13
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		1e-12
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		5e-12
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-11
3fkd_A	350	The Crystal Structure Of L-Threonine-O-3-Phosphate		5e-11
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-10
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		5e-10
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		8e-10
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		9e-10
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		1e-09
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		1e-09
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		1e-09
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		5e-09
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		5e-09
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		2e-08
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		2e-08
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		5e-08
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		1e-07
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		8e-07
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		9e-07
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		1e-06
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		1e-06
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		1e-06
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		2e-06
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		2e-06
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-06
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		3e-06
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		5e-06
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		6e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		8e-06
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		9e-06
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-05
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		2e-05
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		3e-05
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		1e-04
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-04
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		3e-04
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		3e-04
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		6e-04
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		8e-04
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		8e-04
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		8e-04

>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Np_281508.1) From Campylobacter Jejuni At 2.01 A Resolution Length = 365

Iteration: 1
 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 17/255 (6%)
Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
           L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++YPD 
Sbjct: 8   LNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHLYPDD 65
Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF  YE  A  
Sbjct: 66  SXIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKP--KCIFLTSPNNPDGSIINDED---LLKIL 244
            GA   K  +    + N++      E  K   K IFL  PNNP G  ++  +    +K +
Sbjct: 126 CGA---KCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV 182
Query: 245 EMPILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
               LVV+D AY EF+  +         E +K+ DN++ L TFS   GL GLR+GYG   
Sbjct: 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIAN 242
Query: 299 LSIIEYLWRAKQPYN 313
            +II   ++ + P+N
Sbjct: 243 ANIISAFYKLRAPFN 257

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 127/252 (50%), Gaps = 9/252 (3%)
Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-IY 126
           +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            IY
Sbjct: 7   KKSLAGLSSYKPGKREEEVXAELGLTK--ITKLSSNENPLGTSKKVAAIQANSSVETEIY 64
Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  +
Sbjct: 65  PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQN 124
Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A + GA V ++P   D   ++E   +A++ EK   +++ +PNNP G+ I   D+   L+ 
Sbjct: 125 ALIEGAEVREIPLLQDGEHDLEGXLNAID-EKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 246 --MPILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
               +LVVLDEAY E+     E   + V+ + NLI+ RTFSK  GLA  RVGYG     I
Sbjct: 184 VPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243
Query: 302 IEYLWRAKQPYN 313
           I  L   + P+N
Sbjct: 244 IRQLNIVRPPFN 255

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 20/256 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           + MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPY 312
               +I  L +   PY
Sbjct: 228 ANEEVINLLMKVIAPY 243

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 20/256 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           +  Y   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGXYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPY 312
               +I  L +   PY
Sbjct: 228 ANEEVINLLXKVIAPY 243

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score =  114 bits (285), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 97  IVKIDANENPYGPPPEVREAL----GQLKFPYIYPDPESRRLRAALAKDSGLESD-HILV 151
           +VK+DA ENPY  PP +R  L    G++     YP P S  LRA L +   + +   +L+
Sbjct: 32  LVKLDAXENPYRLPPALRSELAARLGEVALNR-YPVPSSEALRAKLKEVXQVPAGXEVLL 90
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G G+DE+I  +      PG K+    P F  Y   A   G   V VP ++DF+L+     
Sbjct: 91  GNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDRGAXL 150
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESR 265
            A    +P  ++L  PNNP G++ +  D   I+          LVV+DEAY  F+  ES 
Sbjct: 151 AAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESW 209
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
              +    NL+V RT SK  GLAG+R+GY A     +E L + + PYN
Sbjct: 210 XSRLTDFGNLLVXRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPPYN 256

>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate Aminotransferase From Geobacter Metallireducens Length = 360

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 91  GRKPEDI---VKIDANENPYGPPPEVREALGQLKFP-----YIYPDPESRRLRAALAKDS 142
           G +P DI   +K++ NENPY P PEV +A+ +   P      IYP   S++LR    +  
Sbjct: 19  GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELY 78
Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
           G +   I+   G+DE+++ ++R     G++I    P+++ Y   A V GA V       D
Sbjct: 79  GFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD 138
Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFSG 261
           F      IA   ER + K  FLT+PN P G     E + ++       +VLDE Y EF+ 
Sbjct: 139 FR-----IAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVLDETYAEFAE 193
Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXX 321
             + +E V++H+N++V RT SK   LAG R+G       +I  L + +  YN        
Sbjct: 194 -SNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDHYNLDRLAQAA 252
Query: 322 XXXXLQNPIYL 332
               L++  YL
Sbjct: 253 CVAALRDQAYL 263

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 87  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
           V+RTFSK   LA  RVGY       I+   R + P+N
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 232

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 39  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 98
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 99  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 148
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 149 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 207
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
           V+RTFSK   LA  RVGY       I+   R + P+N
Sbjct: 208 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 244

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I +         D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 87  EIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
           V+RTFSK   LA  RVGY       I+   R + P+N
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 232

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 122/230 (53%), Gaps = 15/230 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+
Sbjct: 212 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 261

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 122/230 (53%), Gaps = 15/230 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 30  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 88
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 89  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 148
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 149 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 208
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+
Sbjct: 209 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 258

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 121/230 (52%), Gaps = 15/230 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
               ++K+   L+V RT S     AG R+GY     + I+ +   + PY+
Sbjct: 212 ATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 261

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 93  KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILV 151
           K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I++
Sbjct: 24  KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVL 83
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E I 
Sbjct: 84  GNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDII 139
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG--LESR 265
             +  +    + + +PNNP+G +IN E  + +L    E    +++DEA+ EF+G    S 
Sbjct: 140 SKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSF 197
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNXXXXXXXXXXX 324
           +  +K +  L ++R  +K   + G+R GYG      I    +AKQ P+N           
Sbjct: 198 VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257
Query: 325 XLQNPIYLE 333
            L++  Y+E
Sbjct: 258 CLKDTNYIE 266

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 16  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 73
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 74  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 133
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 134 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 252
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 253 RMVKF-QMYN 261

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 17  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 74
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 75  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 134
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 135 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 254 RMVKF-QMYN 262

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + +  
Sbjct: 19  LGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASW 78
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNV 207
           IL G G  E I   +   L P   ++   P F  Y    A +G  + +   R++D     
Sbjct: 79  ILAGNGETESI-FTVASGLKPRRAMI-VTPGFAEYGRALAQSGCEIRRWSLREADGWQLT 136
Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFSGL 262
           + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F   
Sbjct: 137 DAILEALTPDL-DCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 263 ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
           E+  +  +K + ++ VLR+ +K   + GLR+GY
Sbjct: 195 ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGY 227

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 98  VKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           ++I+ NENP G  P+ + A    +     Y   E   L   LA    +E+  IL+  G+ 
Sbjct: 19  IRINFNENPLGXSPKAQAAARDAVVKANRYAKNEILXLGNKLAAHHQVEAPSILLTAGSS 78
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E I   +        ++V    T+   E  A + G  V KV    +++ ++E +  AV  
Sbjct: 79  EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLDNWAFDIEGLKAAVAA 138
Query: 217 -EKPKCIFLTSPNNPDGSIINDEDLLK--ILEMP--ILVVLDEAYTEFSGLESRMEWV-- 269
              P  ++L +PNNP G+I    D+++  I   P     ++DEAY EF   + R   +  
Sbjct: 139 YSGPSIVYLVNPNNPTGTI-TPADVIEPWIASKPANTXFIVDEAYAEFVN-DPRFRSISP 196
Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYG 295
              +  +N+I+L+TFSK    AG RVGY 
Sbjct: 197 XITQGAENIILLKTFSKIHAXAGXRVGYA 225

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPY-GPPPEVREALGQLKFPYI-YPDPES-R 132
           P    +  +  +  L +K ED++ + A E  +  P P V EA+  L+   + Y DP    
Sbjct: 22  PISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIY 81
Query: 133 RLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY--E 184
            LR  +AK  G      +  D ++V  GA + +      +LDPGD+++   P +  Y  +
Sbjct: 82  ELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQ 141
Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
              A     VV+     +F  ++E + + +   K K + + SPNNP G +   E L  ++
Sbjct: 142 IILAGGTVNVVETFMSKNFQPSLEEV-EGLLVGKTKAVLINSPNNPTGVVYRREFLEGLV 200
Query: 245 EMP----ILVVLDEAY------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
            +       ++ DE Y       EF+ +   ++  +  D ++ +  FSK   + G RVGY
Sbjct: 201 RLAKKRNFYIISDEVYDSLVYTDEFTSI---LDVSEGFDRIVYINGFSKSHSMTGWRVGY 257

>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Porphyromonas Gingivalis Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YP+P++  LR  LAK + ++++ ILV  G       I +     G + +   P+F  YE 
Sbjct: 47  YPEPDAGTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYED 104
Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL- 244
                   V   P   D       I +A       C +L +PNNPDG ++   ++L++L 
Sbjct: 105 ACRXYEHEVCFYPSNED-------IGEADFSNXDFC-WLCNPNNPDGRLLQRTEILRLLN 156
Query: 245 EMP-ILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
           + P    VLD++Y  F+  E  R   +K   NL+ + +FS   G+ GLR+GY
Sbjct: 157 DHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGY 208

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQPILPFEV--LSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  P  V   +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +    +E    +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  ++     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +    +E    +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 135 RAALAK------DSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDA 187
           RAA+A+       +   +D++    GA   + +  R +  D  D+ +   P F  Y+   
Sbjct: 82  RAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV 141
Query: 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
              GA +V+VP  ++ F ++ + + + +     + + + SPNNP G++ ++E + K+ ++
Sbjct: 142 NAAGARLVEVPADTEHFQIDFDALEERINAH-TRGVIINSPNNPSGTVYSEETIKKLSDL 200
Query: 247 ----------PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGY 294
                     PI ++ DE Y E      ++ +V K +DN +V  ++SK   L G R+GY
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 106 PYGPPP-----EVREALG---QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           P  PPP      VR ALG   Q   P   P      LR ALA++  +E + ++V  GA E
Sbjct: 35  PSNPPPPFLLEAVRRALGRQDQYAPPAGLPA-----LREALAEEFAVEPESVVVTSGATE 89
Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAV 214
            + ++++ ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+
Sbjct: 90  ALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL 149
Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE-FSGLESRMEWV 269
              + + + L +P NP G +  + +L  I  +     + ++ DE Y E + G   R    
Sbjct: 150 T-PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE 208
Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGY 294
              +    + +  KR    G RVG+
Sbjct: 209 FAPERTFTVGSAGKRLEATGYRVGW 233

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLES 146
           R     V +  NENP    P V+ A+        ++P+   D E R  R  LA+      
Sbjct: 13  RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPF---DAEPRVXRK-LAEHFSCPE 68
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D++ +  G DE  D I         + V   P F  Y    AV+G    ++    D  L+
Sbjct: 69  DNLXLVRGIDECFDRI--SAEFSSXRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLD 126
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRM 266
              +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++S   +R 
Sbjct: 127 PNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRAR- 182
Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVG 293
             +   +N +V R+FSK  GLAGLR+G
Sbjct: 183 -GLAYGENELVFRSFSKSYGLAGLRLG 208

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +    +E    +V DE Y    + G       V     L V    +  
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAXA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 96  DIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALA----KDSGL--E 145
           D+    A E  +  P  + EA    L Q K  Y  P     RLR A+A    +D+GL   
Sbjct: 31  DVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRY-GPAAGEPRLREAIAQKLQRDNGLCYG 89
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAAVNGAAVV-KVPRKSDF 203
           +D+ILV  G  + I  +M  +++PGD+++   P +  Y E      G  V+     ++ F
Sbjct: 90  ADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQF 149
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF 259
            ++ E I  A+   K K +   +P+NP G +   +++  I    +E  + V+ DE Y + 
Sbjct: 150 KVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI 208
Query: 260 -----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                  L       + ++  +V   F+K   + G RVG+ A P+ +++
Sbjct: 209 LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVK 257

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           +++LV  G  E I      + +PGD+I+   P +  Y   A + G  ++ V R+ +    
Sbjct: 103 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFA 162
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FS 260
           +    ++   E+ K I L++P NP G +   ++   ++E+     + +++DE Y+E  F 
Sbjct: 163 IPQNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFR 222
Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           G E       + D ++V+ + S +    G RVG
Sbjct: 223 G-EFASALSIESDKVVVIDSVSXKFSACGARVG 254

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 134 LRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++        + G  
Sbjct: 79  LRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPR 138
Query: 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSII----NDEDLLKILEMPI 248
            + VP   +   +++ + + ++RE+P+ ++L  S  NP G +         L  ++E  +
Sbjct: 139 FLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 249 LVVLDEAYTEFSGLESRM----EWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           +VV D+AY E    E+R+    E  ++  +  +I L +FSK     GLRV +       +
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEAL 256
Query: 303 EYLWRAKQ 310
           + L +AKQ
Sbjct: 257 QKLVQAKQ 264

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGP-PPEVREAL---GQLKFPY 124
           + + +L PY   +  E L +   R+ EDI+ +    NP GP PP + E L    Q +  +
Sbjct: 12  ARIDRLPPYVFNITAE-LKMAARRRGEDIIDLSMG-NPDGPTPPHIVEKLCTVAQREDTH 69
Query: 125 IYPDPESR-RLRAALAK------DSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
            Y       RLR A++       D  ++     +V  G+ E +  +M   LD GD I+  
Sbjct: 70  GYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129
Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGS 233
            P++ ++ + A + GA V  VP         EL  +   RE   KP+ + L  P+NP   
Sbjct: 130 NPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNEL--ERAIRESIPKPRMMILGFPSNPTAQ 187
Query: 234 IINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRA 285
            +  +   +++ +     ++VV D AY +  + G +  S M+     D  +   T SK  
Sbjct: 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY 247
Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
            +AG R+G+      ++  L R K  ++
Sbjct: 248 NMAGWRIGFMVGNPELVSALARIKSYHD 275

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 71  LRKLKPYQPILPFEVL--SIQLGRKPE--DIVKIDANENPYGPPPEVREALGQL-----K 121
           L++LKPY    PF  L  + Q    PE  + V +   E  +  P  + +AL        K
Sbjct: 6   LKQLKPY----PFARLHEAXQGISAPEGXEAVPLHIGEPKHPTPKVITDALTASLHELEK 61
Query: 122 FPYIYPDPESRRLRAALAKD--SGLESD---HILVGCGADELIDLIMRCVLDP---GDK- 172
           +P     PE R+  A   K    GL  D    IL   G+ E +   ++ VL+P   G K 
Sbjct: 62  YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 173 -IVDCPPTFTMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
            IV   P + +YE    + G  +     P  S F+ +   I++ V + + K +F+ SPNN
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPS-FNPDWRSISEEVWK-RTKLVFVCSPNN 179
Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSG------LESRMEWVKKHDNLIV 277
           P GS+++ +   ++ ++      ++  DE Y+E  F G      L++  +  +    L+ 
Sbjct: 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLX 239
Query: 278 LRTFSKRAGLAGLRVGYGA 296
             + S R+ + GLR G+ A
Sbjct: 240 FTSLSXRSNVPGLRSGFVA 258

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 122 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 181
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 182 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 292
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 293 PGFRIGWMVGDPGIIRKMEIAKQ 315

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 132 RRLRAALAKDS----GLESDH---ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           + LR A+A+ +    G + D    I V  GA E +   +  ++  GD+++   P++  Y 
Sbjct: 70  QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129
Query: 185 FDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A++G  V ++  +   F ++ +  A A+  E+ + + L +P+NP  ++    D   +
Sbjct: 130 PAIALSGGIVKRMALQPPHFRVDWQEFA-ALLSERTRLVILNTPHNPSATVWQQADFAAL 188
Query: 244 LEM----PILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYG 295
            +      I V+ DE Y   +  +     V  H  L    + + +F K   + G +VGY 
Sbjct: 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC 248
Query: 296 AFPLSI 301
             P  I
Sbjct: 249 VAPAPI 254

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 77  PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 136
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 137 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 188
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 189 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 247
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 248 PGFRIGWMVGDPGIIRKMEIAKQ 270

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           +LV  GA E I   +  +++PG +++   P +  Y    A+ GA  V VP   D      
Sbjct: 89  VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPD-GRGFA 147
Query: 209 LIADAVERE---KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
           L ADA+ R    + + + + SP+NP G++++  +L  I E+     ++V+ DE Y     
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 262 LESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
             +R   +   D +    I + + +      G ++G+   P  +I  +  AKQ
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQ 260

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSDFS 204
           D + V     E + LI   +LDPGD+I+   P++  Y       G   V  +   + D+ 
Sbjct: 102 DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ 161
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TE 258
            +++ I   +  ++ K I + +PNNP G++ + + L +IL    E  I V+ DE Y    
Sbjct: 162 PDIDDIRKKI-TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT 220
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
           + G       + K   +IV+   SK     G R+GY  F
Sbjct: 221 YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 107 YGPPP-EVREALGQLKFPYIYPDPESR---RLRAALAK------DSGLESDHILVGCGAD 156
           Y PP   ++EA   L  P +     +R    L  +L K      ++ L+++++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLY 247
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA--GLRVGY 294
           F+   +R+  +      + L   S     A  G R+G+
Sbjct: 248 FTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGW 285

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 83  FEVLSI-----QLGRKPEDIVKIDANENPYGPP-PEVREALGQLKFPYI-YPDP----ES 131
           FEV+ I     +L  + + ++ ++  E  +  P P V E +  LK     Y D     E 
Sbjct: 12  FEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILEL 71
Query: 132 RRLRAALAKD---SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           R   + L KD   + +  D+I++  G+   +   +  ++D GD+++   P +  Y+    
Sbjct: 72  REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIR 131
Query: 189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI 248
             GA     P   DF+  VE + +A+  +K K I + SP+NP G +I+ E      E   
Sbjct: 132 FLGAK----PVFCDFT--VESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENIP 184
Query: 249 LVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
            ++ DE Y          S +E+ +  +  I++  FS    + G R+GY      IIE +
Sbjct: 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDEIIEAI 244
Query: 306 WRAKQ 310
            + +Q
Sbjct: 245 LKLQQ 249

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 36/235 (15%)
Query: 109 PPPEV--REALGQLKFPYIYPDPES-------------RRLRAALAKDSGLES--DHILV 151
           P PE+  R  LG++    +  +P+S               L A L K   LE   ++I++
Sbjct: 44  PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVI 103
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
             G    +DL+ R ++DPGD ++   P++  T+  F+    GA +  VP  +D  + V+L
Sbjct: 104 TIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL--GAKIEGVPVDND-GMRVDL 160
Query: 210 IADAVER-----EKPKCIF-LTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF 259
           + + ++      +K K I+ + +  NP G  ++ E    +LE+     +L++ D AY   
Sbjct: 161 LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM 220
Query: 260 SGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311
                 +  +K  DN   +IV  T SK  G  G R+G+      I++ +   KQP
Sbjct: 221 RYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQP 274

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV---KVPRK 200
           LE+  +++  G  + IDL +  + +PG  I+   P F++Y+  A   G  V     +P K
Sbjct: 116 LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEK 175
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           S + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y
Sbjct: 176 S-WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 257 TEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            +    + + E +        ++     +KR  + G R+G+
Sbjct: 234 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           +L + +I   P  ++  + L   +G++ + IL   GA     L++  +++PGD ++   P
Sbjct: 56  KLNYGWIEGSPAFKKSVSQLY--TGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 179 TF-TMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
           T+  +Y+   ++ GA V   ++  ++ +  ++E +   + R   K I + + NNP G++ 
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLI-RPTTKXICINNANNPTGAVX 171
Query: 236 ND---EDLLKIL-EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           +    E+L++I  E+   ++ DE Y  FS L+     ++ +D  I + + S    L G+R
Sbjct: 172 DRTYLEELVEIASEVGAYILSDEVYRSFSELDVP-SIIEVYDKGIAVNSLSXTYSLPGIR 230
Query: 292 VGYGA 296
           +G+ A
Sbjct: 231 IGWVA 235

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 127 PDPESRRLRAALAKD---SGLESDHILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTM 182
           PD     LR  L++D     +++  I +  GA   +DL  +     P   +    P++  
Sbjct: 73  PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK--VDLFRLLSFFGPNQTVAIQDPSYPA 130
Query: 183 YEFDAAVNGAA-VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y   A + GA  ++ +P   + +   E   D         + L SPNNP G+++N + L 
Sbjct: 131 YLDIARLTGAKEIIALPCLQENAFFPEFPEDT----HIDILCLCSPNNPTGTVLNKDQLR 186
Query: 242 KI----LEMPILVVLDEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
            I    +E  IL++ D AY+ F    S  +S  E        I + +FSK  G AG+R+G
Sbjct: 187 AIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246
Query: 294 YGAFP 298
           +   P
Sbjct: 247 WTVIP 251

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 99  KIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158
           K  AN   Y   PE R+A+ +             R+R         + + +++  GA   
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKF-----MEKTRGGRVR--------FDPERVVMAGGATGA 120
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE- 217
            + I+ C+ DPGD  +   P +  +  D       V  +P   + S N ++ + AV+   
Sbjct: 121 NETIIFCLADPGDAFLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 218 --------KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYT-------E 258
                   K K + LT+P+NP G+ ++ + L  +L       I +V DE Y        +
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 259 FSGL-----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           F  +     E  M +  K D + ++ + SK  GL G RVG
Sbjct: 240 FVSIAEILDEQEMTYCNK-DLVHIVYSLSKDMGLPGFRVG 278

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 131 SRRLRAALA----KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           ++ LR A+A    +D  ++S+ + V  GA   I   ++ +L     I    PTF  Y  D
Sbjct: 114 NKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAY-ID 171
Query: 187 AAVNGAAVVKVPRKSDFSLNV---------ELIADAVEREKPKCIFLTSPNNPDGSIIND 237
           ++V          K+    NV             D     +   IF  SPNNP G + + 
Sbjct: 172 SSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASR 231
Query: 238 EDLLKILEMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           + L ++++       +++ D AY  F       S  E     +  I + +FSK AG  G+
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 291 RVGYGAFP 298
           R+G+   P
Sbjct: 292 RLGWSIIP 299

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           LE+  +++  G  + I+L +  + +PG  I+   P F++Y   A   G  V     +P K
Sbjct: 93  LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEK 152
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           S + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y
Sbjct: 153 S-WEIDLKQLESLID-EKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIY 210
Query: 257 TEFSGLESRME-WVKKHDNLIVLRT--FSKRAGLAGLRVGY 294
            +    + + E       N+ +L     + R  + G R+G+
Sbjct: 211 GDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204
           + D + +  G    +  +  CV++PGD ++   P +T Y     +     V +  +    
Sbjct: 108 KEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHY 167
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSI----INDEDLLKILEMPILVVLDEAYTEFS 260
           L      D+   +K K I+LT PNNP GS     + DE + K       +V D AY  F 
Sbjct: 168 LPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF- 226
Query: 261 GLESRMEWVKKHDN----LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
           G +++   +   +N     I + + SK    +G RVG+       I+ L + +   N
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTN 283

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 144 LESDHILVGCGADE-LIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--R 199
           L+ + ++   G+ E L +     + D  +  +  P P + +YE  A    A  +  P  +
Sbjct: 80  LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTK 139
Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEA 255
           ++DF+ ++    +  E ++   + L SPNNP G  ++ E+L+  +++ +    +++ DE 
Sbjct: 140 ENDFTPSL----NEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 256 YTEF-------SGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
           Y+E        S LE+  +   +   N++V+ + SKR+   GLR G+ A
Sbjct: 196 YSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV--KKHDNL------------IVLRTFSKRAGLAGLRVGYGAF 297
            DE Y          EW+    H ++            I + +  K   + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQ 310
           P  +I++L   +Q
Sbjct: 255 PAHLIKHLQTVQQ 267

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
                +FSK AG  G+R+G+   P  ++
Sbjct: 262 AXETASFSKYAGFTGVRLGWTVIPKKLL 289

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
            +   +FSK AG  G+R+G+   P  ++
Sbjct: 262 AMETASFSKYAGFTGVRLGWTVIPKKLL 289

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA----------GLAGLRVGYGAF 297
            DE Y          EW+      H  +  L    +R            + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQ 310
           P  +I++L   +Q
Sbjct: 255 PAHLIKHLQTVQQ 267

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
           +H+++  GA    +  + C+ DPG+ ++   P +  ++ D     G  +V +   S    
Sbjct: 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 171
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
            +      E   +A +R  + K + +T+P+NP G+ +   +L  +L       I ++ DE
Sbjct: 172 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 231
Query: 255 AY--TEFS--GLESRMEWVKKHD---------NLIVLRTFSKRAGLAGLRVG 293
            Y  T FS     S ME +K  +          + V+ + SK  GL G RVG
Sbjct: 232 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-------- 200
           +LV  GA E +   ++  +D GD+++   P F  YE      G     +P K        
Sbjct: 104 VLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTI 163
Query: 201 --SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLD 253
             +D+ L N EL  +A+  EK K I + +P+NP G +++  +L  +  +     +L V D
Sbjct: 164 SSADWVLDNNEL--EALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSD 221
Query: 254 EAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
           E Y     +    E ++        +  I + +  K   L G ++G+   P ++++ L  
Sbjct: 222 EVYEHM--VFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM 279
Query: 308 AKQ 310
             Q
Sbjct: 280 VHQ 282

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
            +   +FS+ AG  G+R+G+   P  ++
Sbjct: 262 AMETASFSQYAGFTGVRLGWTVIPKKLL 289

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	334
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	1e-118
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-115
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	1e-113
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-113
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-106
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	1e-104
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	1e-104
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	1e-103
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	1e-101
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	1e-100
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	5e-99
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	3e-92
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	9e-51
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	1e-35
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	7e-28
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	1e-27
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	2e-26
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	2e-26
3nra_A	407	Aspartate aminotransferase; structural genomics, j	2e-26
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	2e-26
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	2e-26
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	4e-26
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	8e-26
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	1e-25
3ele_A	398	Amino transferase; RER070207001803, structural gen	3e-25
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	6e-25
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	7e-25
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-24
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	2e-24
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	5e-24
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	2e-23
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	1e-22
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	9e-22
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	1e-21
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-21
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	7e-21
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	2e-20
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	3e-20
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	3e-20
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	3e-20
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	3e-20
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	5e-20
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	1e-19
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	1e-19
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	2e-19
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	3e-19
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	5e-19
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	6e-19
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	7e-18
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	1e-17
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	8e-17
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	3e-16
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	4e-16
1vp4_A	425	Aminotransferase, putative; structural genomics, j	8e-16
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	8e-16
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	1e-15
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	1e-15
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	1e-15
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	2e-14
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	3e-14
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	7e-07
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-06
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	3e-06
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	4e-06
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	5e-06
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	3e-05
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	1e-04

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  344 bits (885), Expect = e-118
 Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 9/273 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
            +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            I
Sbjct: 6   WKKSLAGLSSYKPGKREEEVMAELGLT--KITKLSSNENPLGTSKKVAAIQANSSVETEI 63

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  
Sbjct: 64  YPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ 123

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V ++P   D   ++E + +A+  EK   +++ +PNNP G+ I   D+   L+
Sbjct: 124 NALIEGAEVREIPLLQDGEHDLEGMLNAI-DEKTTIVWICNPNNPTGNYIELADIQAFLD 182

Query: 246 -MP--ILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
            +P  +LVVLDEAY E+   +     + V+ + NLI+ RTFSK  GLA  RVGYG     
Sbjct: 183 RVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           II  L   + P+N +   +  A  A+++  ++ 
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIG 275

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score =  337 bits (867), Expect = e-115
 Identities = 86/277 (31%), Positives = 147/277 (53%), Gaps = 13/277 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
               L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++
Sbjct: 4   FNEFLNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHL 61

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF MYE 
Sbjct: 62  YPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEI 121

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
            A   GA   K    +      + + +   +++ K IFL  PNNP G  ++  +  + ++
Sbjct: 122 YAKQCGAKCYKTQSITHNLDEFKKLYETH-KDEIKLIFLCLPNNPLGECLDASEATEFIK 180

Query: 246 -MP--ILVVLDEAYTEFSGLE------SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
            +    LVV+D AY EF+  +         E +K+ DN++ L TFSK  GL GLR+GYG 
Sbjct: 181 GVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240

Query: 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
              +II   ++ + P+NVS  A  AA AA+ +  + E
Sbjct: 241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTE 277

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score =  331 bits (850), Expect = e-113
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 24/277 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 7   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLN-- 53

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTF 180
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+
Sbjct: 54  ---RYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 110

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
            MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D 
Sbjct: 111 GMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDF 168

Query: 241 LKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 169 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV 334
              +I  L +   PY +S      A  AL     + +
Sbjct: 229 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAM 265

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score =  331 bits (851), Expect = e-113
 Identities = 93/280 (33%), Positives = 139/280 (49%), Gaps = 24/280 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--K 121
           +  IR  +R +  Y                   +VK+DA ENPY  PP +R  L     +
Sbjct: 11  ERIIRDDVRAMGAYHV------------PDSHGLVKLDAMENPYRLPPALRSELAARLGE 58

Query: 122 FPY-IYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
                YP P S  LRA L +   + +   +L+G G+DE+I ++      PG K++   P 
Sbjct: 59  VALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPG 118

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY   A   G   V VP ++DF+L+   +  A+   +P  ++L  PNNP G++ +  D
Sbjct: 119 FVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAAD 178

Query: 240 LLKILE------MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +  I+          LVV+DEAY  F+  ES M  +    NL+V+RT SK  GLAG+R+G
Sbjct: 179 MEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESWMSRLTDFGNLLVMRTVSKL-GLAGIRLG 236

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           Y A     +E L + + PYNV+V  E  A  AL++   L+
Sbjct: 237 YVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLD 276

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  315 bits (809), Expect = e-106
 Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 25/283 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ---- 119
           D  +R  LR    Y               +    ++++ NENPY P   +   L      
Sbjct: 11  DLPLREELRGEHAYGA------------PQLNVDIRLNTNENPYPPSEALVADLVATVDK 58

Query: 120 -LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
                  YP+ ++  LR  LA          +  D++    G++E++  +++    PG  
Sbjct: 59  IATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118

Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232
            +   P+++M+   A       + V R +DF +++++  + +  ++P  +F+T+PNNP G
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTG 178

Query: 233 SIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGL 290
            + + +D+ +I+   P +V++DEAY EFS   S    ++K+   L+V RT SK    AG 
Sbjct: 179 DVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGG 238

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           R+GY     + I+ +   + PY++S  ++ AA  AL++     
Sbjct: 239 RLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTL 281

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score =  308 bits (791), Expect = e-104
 Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 30/275 (10%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
           + +    ++  PY+              +  D   +  NENP+  P ++ + + +     
Sbjct: 2   NPLDLIAKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSD 48

Query: 125 ---IYPDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              IY D     L   +        L  +++ VG GADE+I ++M       D+ V  PP
Sbjct: 49  ALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLM----FDRSVFFPP 104

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           T++ Y   A   GA  ++VP   D  +        V   +   +F+ +PNNP G +   E
Sbjct: 105 TYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNVGEGDVVFIPNPNNPTGHVFERE 158

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ +IL+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY    
Sbjct: 159 EIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS 217

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
              I+   R + P+NVS  +++ A  AL +    E
Sbjct: 218 EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFE 252

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score =  309 bits (793), Expect = e-104
 Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 26/276 (9%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPED---IVKIDANENPYGPPPEVREALGQLKFP 123
           +R ++  +K Y P           G +P D    +K++ NENPY P PEV +A+ +   P
Sbjct: 6   LRQNIASMKGYIP-----------GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGP 54

Query: 124 Y-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                 IYP   S++LR    +  G +   I++  G+DE+++ ++R     G++I    P
Sbjct: 55  DGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHP 114

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           +++ Y   A V GA V       DF +          R + K  FLT+PN P G     E
Sbjct: 115 SYSYYGTLAEVQGARVRTFGLTGDFRIAGFPE-----RYEGKVFFLTTPNAPLGPSFPLE 169

Query: 239 DLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
            + ++      ++VLDE Y EF+   + +E V++H+N++V RT SK   LAG+R+G    
Sbjct: 170 YIDELARRCAGMLVLDETYAEFAE-SNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
              +I  L + +  YN+   A+ A  AAL++  YL 
Sbjct: 229 RPEVIAALDKIRDHYNLDRLAQAACVAALRDQAYLS 264

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score =  307 bits (789), Expect = e-103
 Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 14/251 (5%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI 149
             K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I
Sbjct: 22  VFKGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGI 81

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           ++G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E 
Sbjct: 82  VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYED 137

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-- 263
           I   +  +    + + +PNNP+G +IN E  + +L++       +++DEA+ EF+G    
Sbjct: 138 IISKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSS 195

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVAAEVAA 322
           S +  +K +  L ++R  +K   + G+R GYG      I   +   + P+N++  AE+AA
Sbjct: 196 SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAA 255

Query: 323 CAALQNPIYLE 333
              L++  Y+E
Sbjct: 256 INCLKDTNYIE 266

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  301 bits (774), Expect = e-101
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 11/269 (4%)

Query: 73  KLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPES 131
            L            +  LG  P+ ++   AN NP G P  V+ AL   L     YPD + 
Sbjct: 2   ALFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADY 61

Query: 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
             L  ALA+   + +  IL G G  E I  +   +     + +   P F  Y    A +G
Sbjct: 62  FHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSG 119

Query: 192 AAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M 246
             + +   R++D     + I +A+      C+FL +PNNP G +     L  I +    +
Sbjct: 120 CEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSL 178

Query: 247 PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY 304
            I ++LDEA+ +F       +  +K + ++ VLR+ +K   + GLR+GY      + +  
Sbjct: 179 NINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR 238

Query: 305 LWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           + R + P++V+  A +A   ALQ+  + +
Sbjct: 239 MRRQQMPWSVNALAALAGEVALQDSAWQQ 267

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score =  297 bits (763), Expect = e-100
 Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 8/254 (3%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALA 139
           +          R     V +  NENP    P V+ A+         YP     R+   LA
Sbjct: 2   MSVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLA 61

Query: 140 KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           +      D++++  G DE  D I         + V   P F  Y    AV+G    ++  
Sbjct: 62  EHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL 119

Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF 259
             D  L+   +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++
Sbjct: 120 TDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDY 176

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAE 319
           S   +R   +   +N +V R+FSK  GLAGLR+G    P  +I  + R +   NV     
Sbjct: 177 SSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDL 234

Query: 320 VAACAALQNPIYLE 333
            A  AAL N    E
Sbjct: 235 HALEAALDNDRARE 248

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score =  295 bits (757), Expect = 5e-99
 Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 14/248 (5%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +     +IV         G    + + L + L     YP+P++  LR  LAK + ++++ 
Sbjct: 10  ITPLSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNA 69

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ILV  G       I +     G + +   P+F  YE    +    V   P   D      
Sbjct: 70  ILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI----- 122

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLE-SR 265
                 +       +L +PNNPDG ++   ++L++L        VLD++Y  F+  E  R
Sbjct: 123 ---GEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR 179

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAA 325
              +K   NL+++ +FS   G+ GLR+GY       ++ +     P+ V+  A  AA   
Sbjct: 180 PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFI 239

Query: 326 LQNPIYLE 333
           L +P    
Sbjct: 240 LIHPAQFT 247

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score =  277 bits (712), Expect = 3e-92
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 11/264 (4%)

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAA 137
              P            ++ ++I+ NENP G  P+ + A    +     Y   E   L   
Sbjct: 2   ETQPESAAFTAPS--TDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNK 59

Query: 138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV 197
           LA    +E+  IL+  G+ E I   +        ++V    T+   E  A + G  V KV
Sbjct: 60  LAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV 119

Query: 198 PRKSDFSLNVELIADAV-EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLD 253
               +++ ++E +  AV     P  ++L +PNNP G+I   + +   +   P   + ++D
Sbjct: 120 KMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179

Query: 254 EAYTEF---SGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           EAY EF       S    + +  +N+I+L+TFSK   +AG+RVGY     ++I  + R  
Sbjct: 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYV 239

Query: 310 QPYNVSVAAEVAACAALQNPIYLE 333
               ++ +   AA A++ +  ++ 
Sbjct: 240 AGEKINFSGVDAALASMNDSAFIT 263

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  172 bits (437), Expect = 9e-51
 Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 25/212 (11%)

Query: 126 YPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGD----KIVD 175
                   L  A+        ++  E  +I+VG G+ +L    +  +          +V 
Sbjct: 65  LCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVA 124

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
             P ++ Y  +     + + K           E  A   +++ P    +TSPNNPDG+I 
Sbjct: 125 AAPFYSTYVEETTYVRSGMYKW----------EGDAWGFDKKGPYIELVTSPNNPDGTI- 173

Query: 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
            +  + +  +    V+ D AY             ++ D+ I+L TFSK  G AG R+G+ 
Sbjct: 174 RETVVNRPDDDEAKVIHDFAYYWPHYTP----ITRRQDHDIMLFTFSKITGHAGSRIGWA 229

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327
                 +          N    ++ +     +
Sbjct: 230 LVKDKEVAKKMVEYIIVNSIGVSKESQVRTAK 261

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  131 bits (333), Expect = 1e-35
 Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLI 162
                E         +L + +I   P     + +++   +G++ + IL   GA     L+
Sbjct: 41  SGTNPEDFYKKLQGTKLNYGWIEGSPA---FKKSVSQLYTGVKPEQILQTNGATGANLLV 97

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPK 220
           +  +++PGD ++   PT+          GA V       ++ +  ++E +   + R   K
Sbjct: 98  LYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI-RPTTK 156

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            I + + NNP G++++   L +++E+       ++ DE Y  FS        ++ +D  I
Sbjct: 157 MICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE-LDVPSIIEVYDKGI 215

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQNP 329
            + + SK   L G+R+G+ A    + + L   +  Y      V  ++ A  AL + 
Sbjct: 216 AVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRD-YTMICAGVFDDLVAQLALAHY 270

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  110 bits (278), Expect = 7e-28
 Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 23/242 (9%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
           PP    +AL + L  P  Y Y     +       A       G+  D     L   G+ E
Sbjct: 39  PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
            +  ++  + +P D ++     +  Y   A V       +P + D   +++ + + V   
Sbjct: 99  GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGV-WR 157

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRMEWV 269
           + K + L  PNNP G++ +     + L +     + ++ D  Y +    E    S +   
Sbjct: 158 EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALP 216

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327
              + ++ L + SK   LAG R+G+       +  L R K    +N           AL+
Sbjct: 217 GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALK 276

Query: 328 NP 329
            P
Sbjct: 277 TP 278

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  110 bits (277), Expect = 1e-27
 Identities = 61/311 (19%), Positives = 112/311 (36%), Gaps = 35/311 (11%)

Query: 44  MSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPF-EVLSIQLGRKPEDIVKID- 101
           M S+       +    R  G   I + L  +        F + +  ++   P  +  I+ 
Sbjct: 1   MGSSHHHHHHSSGLVPR--GSHMISNKLANIPDS----YFGKTMGRKIEHGPLPL--INM 52

Query: 102 ANENP-YGPPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HI 149
           A   P    P  + +   + L  P    Y         + A+     +   +  D    +
Sbjct: 53  AVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEV 112

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVE 208
            +  G    +  +  CV++PGD ++   P +T Y     +     V +      +  +  
Sbjct: 113 CILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWS 172

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE- 263
            +   +  +K K I+LT PNNP GS    E   + +         +V D AY  F G + 
Sbjct: 173 KVDSQI-IDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDA 230

Query: 264 ---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318
              S +      D  I + + SK   ++G RVG+      +I+ L + +      +  A 
Sbjct: 231 KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGAL 290

Query: 319 EVAACAALQNP 329
           + AA  AL + 
Sbjct: 291 QDAAIYALNHY 301

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  107 bits (269), Expect = 2e-26
 Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 25/241 (10%)

Query: 107 YGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164
             PPP + EA+ + L     Y P      LR ALA++  +E + ++V  GA E + ++++
Sbjct: 37  NPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQ 96

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKC 221
            ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+   + + 
Sbjct: 97  SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL-TPRTRA 155

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLE----SRMEWVKK 271
           + L +P NP G +  + +L  I        + ++ DE Y E  +                
Sbjct: 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAP---- 211

Query: 272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---AEVAACAALQN 328
            +    + +  KR    G RVG+   P   +  L   +Q +    A    +     AL+ 
Sbjct: 212 -ERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQ-WTSFSAPTPLQAGVAEALKL 269

Query: 329 P 329
            
Sbjct: 270 A 270

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  107 bits (269), Expect = 2e-26
 Identities = 56/290 (19%), Positives = 98/290 (33%), Gaps = 54/290 (18%)

Query: 80  ILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPD 128
           + PF V+ +     +       I+ ++  +   G P    EAL        L     Y  
Sbjct: 11  VDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALG----YTV 66

Query: 129 ----PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
               P    LR  +A    +  G++     +++  G+     L    + D GD++    P
Sbjct: 67  ALGLPA---LRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123

Query: 179 TFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y       G   V +P   ++                    + + SP NP G++++
Sbjct: 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPA----DFAGLDLAGLMVASPANPTGTMLD 179

Query: 237 DEDLLKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
              +  +           + DE Y          + LE         D   V+ +FSK  
Sbjct: 180 HAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELT-------DECYVINSFSKYF 232

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE 333
            + G RVG+   P   +  + R  Q        A++VAA AAL     L+
Sbjct: 233 SMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQ 282

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  107 bits (269), Expect = 2e-26
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 33/224 (14%)

Query: 134 LRAALA----KDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           +R  LA      +G      D +++  G    + L +   +  GDK+    P +      
Sbjct: 83  IRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL 142

Query: 187 AAVNGAAVVKVPRKS------DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
                  +V V             L++  + +A  +   +    ++PNNP G + + E++
Sbjct: 143 VEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF-KAGARVFLFSNPNNPAGVVYSAEEI 201

Query: 241 LKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289
            +I          V+ D+ Y         ++ L +        +N++ +   SK   L+G
Sbjct: 202 GQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDA--ENVVTIMGPSKTESLSG 259

Query: 290 LRVGYGAFPLSIIEYLWRAK-QPY---NVSVAAEVAACAALQNP 329
            R+G      +II  +   K Q       +  ++          
Sbjct: 260 YRLGVAFGSRAIIARM--EKLQAIVSLRAAGYSQAVLRGWFDEA 301

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  107 bits (269), Expect = 2e-26
 Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 24/244 (9%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
            PP + E L    +    + Y       RLR A++        ++ D     +V  G+ E
Sbjct: 51  TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE 110

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            +  +M   LD GD I+   P++ ++ + A + GA V  VP     DF   +E       
Sbjct: 111 GLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRES- 169

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLE--SRME 267
             KP+ + L  P+NP    +  +   +++ +     ++VV D AY +  + G +  S M+
Sbjct: 170 IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229

Query: 268 WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAA 325
                D  +   T SK   +AG R+G+      ++  L R K    Y      +VAA AA
Sbjct: 230 VPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAA 289

Query: 326 LQNP 329
           L+  
Sbjct: 290 LEGD 293

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  107 bits (268), Expect = 2e-26
 Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 35/221 (15%)

Query: 126 YPDPESRRLRAALAKDSGL---ESDHILVGCGADELIDLIMR--------CVLDPGDKIV 174
           +   E  +    L +  G    +  +I+ G G  +LI  ++             P  K+V
Sbjct: 100 FISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVV 159

Query: 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234
              P + ++                   ++ N     +     +     +TSPNNP+G +
Sbjct: 160 AHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVS-NPEQYIEMVTSPNNPEGLL 212

Query: 235 INDEDLLKILEMPILVVLDEAY--TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
                ++K        + D  Y    ++ ++       K D  I+L T SK  G +G R 
Sbjct: 213 --RHAVIKG----CKSIYDMVYYWPHYTPIKY------KADEDILLFTMSKFTGHSGSRF 260

Query: 293 GYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPI 330
           G+      S+   L               ++ +   L+  +
Sbjct: 261 GWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVV 301

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  107 bits (268), Expect = 4e-26
 Identities = 38/265 (14%), Positives = 79/265 (29%), Gaps = 50/265 (18%)

Query: 94  PEDIVK-----IDANENPYGPP----PEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144
           P+  ++     +        P     PE+++               SR  +        +
Sbjct: 59  PQIGIETEIQKLREGVASIYPNLDGLPELKQEA-------------SRFAK----LFVNI 101

Query: 145 E--SDHILVGCGADELIDLIM----RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           +  +   +   G+ +   +      R   +     +   P F + +    + G       
Sbjct: 102 DIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFD 161

Query: 199 --RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
                   L  +L +      +   I  ++PNNP    + DE+L  I E+     ++V+ 
Sbjct: 162 LFEYRGEKLREKLESYLQT-GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220

Query: 253 DEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           D AY              +           DN I+  + SK    AG R+G       + 
Sbjct: 221 DLAYFGMD-FRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLY 279

Query: 303 EYLWRAKQPYNVSVAAEVAACAALQ 327
           E  +   +     +    A  ++  
Sbjct: 280 EREYPDLEESFGRLRFGEALSSSAL 304

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  105 bits (264), Expect = 8e-26
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 24/217 (11%)

Query: 134 LRAA----LAKDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           LR A    L K +G+E      I+V  GA++   + +   L  G++++   P F  Y   
Sbjct: 68  LREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPA 127

Query: 187 AAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI- 243
             + G   V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I 
Sbjct: 128 VILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEEIA 186

Query: 244 ---LEMPILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +E  ++V+ DE Y    +      S        +  I +  FSK   + G R+G+ A
Sbjct: 187 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246

Query: 297 FPLSIIEYLWRAK-QPYNVSVA---AEVAACAALQNP 329
            P  IIE +   K Q YN +      + AA  AL++ 
Sbjct: 247 APSWIIERM--VKFQMYNATCPVTFIQYAAAKALKDE 281

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  104 bits (262), Expect = 1e-25
 Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 36/285 (12%)

Query: 73  KLKPYQPILPFEVLS--IQLGRKPEDIVKIDANE-NPYGPPPE-VREALGQ-LKFPYIYP 127
             +PY    PFE L   ++     +    +D     P    P+ +++AL        IYP
Sbjct: 3   TFEPY----PFERLRALLKEITPKKRG--LDLGIGEPQFETPKFIQDALKNHTHSLNIYP 56

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCPP 178
                  LRAA            L+ + ++   G+ E++      VL       I    P
Sbjct: 57  KSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNP 116

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
            + +YE  A    A  + +P   +      L  +  E ++   + L SPNNP G  ++ E
Sbjct: 117 FYQIYEGAAKFIKAKSLLMPLTKENDFTPSL--NEKELQEVDLVILNSPNNPTGRTLSLE 174

Query: 239 DLLKILEM----PILVVLDEAYTEF-------SGLESRMEWVKK-HDNLIVLRTFSKRAG 286
           +L+  +++      +++ DE Y+E        S LE+ M    +   N++V+ + SKR+ 
Sbjct: 175 ELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSS 234

Query: 287 LAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNP 329
             GLR G+ A    ++E     +    Y  + A + A+ AA  + 
Sbjct: 235 APGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDD 279

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  103 bits (259), Expect = 3e-25
 Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 25/216 (11%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
            RAA+A       G    +D++ +  GA   + +  R +     D+ +   P F  Y+  
Sbjct: 81  TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF 140

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
               GA +V+VP     F ++ + + + +     + + + SPNNP G++ ++E + K+ +
Sbjct: 141 VNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEETIKKLSD 199

Query: 246 M----------PILVVLDEAYTE--FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
           +          PI ++ DE Y E  + G++   +      DN +V  ++SK   L G R+
Sbjct: 200 LLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY--DNTLVCYSYSKSLSLPGERI 257

Query: 293 GYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQ 327
           GY   P  + +     A           V A +  Q
Sbjct: 258 GYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQ 293

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  103 bits (258), Expect = 6e-25
 Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 33/246 (13%)

Query: 114 REALGQLKFPYIYPDPE-SRRLRAALAK--------DSGLESDHILVGCGADELIDLIMR 164
            E +   K    + D       R A+AK            + + +++  GA    + I+ 
Sbjct: 67  SEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIF 126

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE---- 217
           C+ DPGD  +   P +  +  D     G  ++ +  +S  +F +  + + +A E      
Sbjct: 127 CLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186

Query: 218 -KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSG--------- 261
            K K + LT+P+NP G+ ++ + L  +L       I +V DE Y    F           
Sbjct: 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEI 246

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVAAEV 320
           L+ +       D + ++ + SK  GL G RVG   +F   ++    +      VS   + 
Sbjct: 247 LDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQY 306

Query: 321 AACAAL 326
              A L
Sbjct: 307 FLAAML 312

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  102 bits (257), Expect = 7e-25
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 38/250 (15%)

Query: 109 PPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGADEL 158
            P  ++E L     +    Y P    + LR A+A    +  G + D    I V  GA E 
Sbjct: 44  GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA 103

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVERE 217
           +   +  ++  GD+++   P++  Y    A++G  V ++  +   F ++ +  A  +  E
Sbjct: 104 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL-SE 162

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKK 271
           + + + L +P+NP  ++    D   +        I V+ DE Y    FS         + 
Sbjct: 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--------QG 214

Query: 272 HDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE 319
           H +++       R      F K   + G +VGY   P  I   + +  Q   ++V+  A+
Sbjct: 215 HASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQ 274

Query: 320 VAACAALQNP 329
           +A    L+  
Sbjct: 275 LALADMLRAE 284

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  101 bits (255), Expect = 2e-24
 Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 40/254 (15%)

Query: 107 YGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGAD 156
              PP++ +A           Y P P S  LR A+A    +  G++ D    +LV  GA 
Sbjct: 37  EDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGAT 96

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADA 213
           E I   +  +++PG +++   P +  Y    A+ GA  V VP       F+L+ + +  A
Sbjct: 97  EAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRME 267
           V   + + + + SP+NP G++++  +L  I    +   ++V+ DE Y    F        
Sbjct: 157 V-TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH------ 209

Query: 268 WVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS 315
              +H  L        RT      +K     G ++G+   P  +I  +  AKQ   Y   
Sbjct: 210 --ARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG 267

Query: 316 VAAEVAACAALQNP 329
              + A   AL   
Sbjct: 268 APFQPAVALALDTE 281

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  101 bits (255), Expect = 2e-24
 Identities = 47/248 (18%), Positives = 97/248 (39%), Gaps = 41/248 (16%)

Query: 110 PPEVREALGQLKFPYI-YPD----PESRRLRAALA----KDSGLE--SDHILVGCGADEL 158
           P    E + + K   + Y       E   LR A A    +   ++   +++LV  G  E 
Sbjct: 58  PEVFFERIYENKPEVVYYSHSAGIWE---LREAFASYYKRRQRVDVKPENVLVTNGGSEA 114

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER 216
           I      + +PGD+I+   P +  Y   A + G  ++ V    +  F++  + +   +  
Sbjct: 115 ILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN- 172

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFSGLESRMEWVKKH 272
           E+ K I L++P NP G +   +++  +        + +++DE Y+E         +  + 
Sbjct: 173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-------FRGEF 225

Query: 273 --------DNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPY--NVSVAAEVA 321
                   D ++V+ + SK+    G RVG        +I +  +  Q       +  ++ 
Sbjct: 226 ASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQ-GRLAPPLLEQIG 284

Query: 322 ACAALQNP 329
           +   L   
Sbjct: 285 SVGLLNLD 292

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score = 99.9 bits (250), Expect = 5e-24
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 34/215 (15%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR  ++         +   D+I++  G+   +   +  ++D GD+++   P +  Y+   
Sbjct: 71  LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFI 130

Query: 188 AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247
              GA  V           VE + +A+  +K K I + SP+NP G +I+ E      E  
Sbjct: 131 RFLGAKPVFCD------FTVESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENI 183

Query: 248 ILVVLDEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAF 297
             ++ DE Y       + + +  K           +  I++  FSK   + G R+GY   
Sbjct: 184 PYIISDEIY-------NGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS 236

Query: 298 PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNP 329
              IIE + + +Q      A   ++ AA  A +  
Sbjct: 237 NDEIIEAILKLQQ-NLFISAPTISQYAALKAFEKE 270

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 34/203 (16%)

Query: 126 YPDPE-SRRLRAALAK------DSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
           + D       + A+         + +  + +H+++  GA    +  + C+ DPG+ ++  
Sbjct: 82  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 141

Query: 177 PPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPN 228
            P +  ++ D     G  +V +   S   F +    + +A +       + K + +T+P+
Sbjct: 142 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 201

Query: 229 NPDGSIINDEDLLKILEM----PILVVLDEAY-------------TEFSGLESRMEWVKK 271
           NP G+ +   +L  +L       I ++ DE Y              E     +  E  + 
Sbjct: 202 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 261

Query: 272 HDNLIVLRTFSKRAGLAGLRVGY 294
              + V+ + SK  GL G RVG 
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGA 284

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 47/297 (15%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE-------NPYGPPPE-VREALGQ-LK 121
           L++LKPY    PF     +L    + I   +  E        P  P P+ + +AL   L 
Sbjct: 6   LKQLKPY----PFA----RLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLH 57

Query: 122 FPYIYPDPE-SRRLRAALA-------KDSGLESD-HILVGCGADELIDLIMRCVLDP--- 169
               YP       LR A A           +++D  IL   G+ E +   ++ VL+P   
Sbjct: 58  ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD 117

Query: 170 --GDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTS 226
                IV   P + +YE    + G  +         F+ +   I++ V  ++ K +F+ S
Sbjct: 118 GIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEV-WKRTKLVFVCS 176

Query: 227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------SGLESRMEWVKKHDN 274
           PNNP GS+++ +   ++ ++      ++  DE Y+E           L++  +  +    
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNP 329
           L++  + SKR+ + GLR G+ A    +++     +      +S+  + A+ AA  + 
Sbjct: 237 LLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDE 293

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score = 94.3 bits (235), Expect = 9e-22
 Identities = 53/265 (20%), Positives = 92/265 (34%), Gaps = 50/265 (18%)

Query: 107 YGPPPEVREALGQ-----LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGC 153
           Y  P     AL             Y       RL  AL+    +      +    +LV  
Sbjct: 49  YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTV 108

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----------RKSDF 203
           GA E +   ++  +D GD+++   P F  YE      G     +P            +D+
Sbjct: 109 GAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADW 168

Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE- 258
            L+   +      EK K I + +P+NP G +++  +L  +     +  +L V DE Y   
Sbjct: 169 VLDNNELEALF-NEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHM 227

Query: 259 -FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWR 307
            F           +H  +  L     RT       K   L G ++G+   P ++++ L  
Sbjct: 228 VFEP--------FEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM 279

Query: 308 AKQ--PYNVSVAAEVAACAALQNPI 330
             Q   Y  +   + A     +  +
Sbjct: 280 VHQNCVYTCATPIQEAIAVGFETEL 304

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 58/262 (22%), Positives = 99/262 (37%), Gaps = 49/262 (18%)

Query: 107 YGPPPEVREALGQ---LKFPYIYPDPESR-RLRAALA----KDSGLESD---HILVGCGA 155
             PP  V+E L +   +     Y        L  AL+    K    + D    ILV  GA
Sbjct: 35  ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGA 94

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-----------RKSDFS 204
              +   ++ ++DPGD+++   P +  YE    + GA  V +P             SD++
Sbjct: 95  YGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWT 154

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
            +   +       K K I L +P+NP G +   ++L  I    ++   L + DE Y    
Sbjct: 155 FDPRELESKF-SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLV 213

Query: 259 FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           ++G          H  +  L     RT       K   + G ++G+   P  +I++L   
Sbjct: 214 YTG--------HTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTV 265

Query: 309 KQ--PYNVSVAAEVAACAALQN 328
           +Q   Y  +   + A   A   
Sbjct: 266 QQNSFYTCATPLQAALAEAFWI 287

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 52/265 (19%), Positives = 97/265 (36%), Gaps = 51/265 (19%)

Query: 107 YGPPPEVREALGQ-LKFPYIY----PDPESRRLRAALA----KDSGLESD---HILVGCG 154
           + PP    EA    +   ++            L   LA    +  G E D   ++LV  G
Sbjct: 40  FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVG 99

Query: 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSD 202
               +    + ++D GD+++   P F  YE    + G   V V               S+
Sbjct: 100 GYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN 159

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE 258
           + L+   +A      + K + L +PNNP G + + E+L  +     +  ++ + DE Y  
Sbjct: 160 WQLDPMELAGKF-TSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQW 218

Query: 259 --FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLW 306
             + G         +H ++  L     RT       K     G +VG+   P  I+++L 
Sbjct: 219 MVYDG--------HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLR 270

Query: 307 RAKQ--PYNVSVAAEVAACAALQNP 329
              Q   ++    ++ A   + +  
Sbjct: 271 TVHQNSVFHCPTQSQAAVAESFERE 295

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score = 91.5 bits (228), Expect = 7e-21
 Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 51/259 (19%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA---KDSGLESDHILVGCGAD 156
               V EA                Y  P+     LR  L+       +++  I +  GA 
Sbjct: 47  LNASVAEAFASSIARLSSPTTCRGYG-PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK 105

Query: 157 ELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIAD 212
              DL  +     P   +    P++  Y   A + GA  ++ +P  +++ F        +
Sbjct: 106 V--DLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF------FPE 157

Query: 213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------S 260
             E      + L SPNNP G+++N + L  I+       IL++ D AY+ F        S
Sbjct: 158 FPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKS 217

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRAKQP- 311
             E  +   +     I + +FSK  G AG+R+G+         A    +I+   R     
Sbjct: 218 IFE--IPDAR--FCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT 273

Query: 312 -YNVSVAAEVAACAALQNP 329
               S+ A+ A  A L   
Sbjct: 274 FNGASIPAQEAGVAGLSIL 292

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score = 91.0 bits (226), Expect = 2e-20
 Identities = 50/267 (18%), Positives = 84/267 (31%), Gaps = 30/267 (11%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPE-VREA-LGQLKFPYIYPDPESRRLRAALAK------ 140
              +   D V     E       + V E   G +   Y  PD         +        
Sbjct: 97  DEDKFLIDAVNYCHTE-LGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELS 155

Query: 141 --DSGLESDH-ILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
             D+ L     +    G    I      L    +L  GDKI    P FT Y     +   
Sbjct: 156 YKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDY 215

Query: 193 AVVKVP----RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-- 246
            +V+V      K+D+ +    I    +    K + + +P NP     +   L  I +   
Sbjct: 216 ELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEFDTNALNAIKQAVE 274

Query: 247 ---PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
               ++++ DE Y  F    +S    V    N +++ ++SK  G  G R+G  A     +
Sbjct: 275 KNPKLMIISDEVYGAFVPNFKSIYSVVP--YNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332

Query: 303 EYLWRAKQPYNVSVAAEVAACAALQNP 329
                A               + + +P
Sbjct: 333 FDDNIAHLDKVELRQLHKRYSSVVLDP 359

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 38/230 (16%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFD 186
           L  ALA    +  G +    +I +  G+      +                 F +  E+ 
Sbjct: 80  LLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYI 139

Query: 187 AAVN-----------GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
              +              +  +P +  F  +V+     +  E+   I ++ P NP G++I
Sbjct: 140 GYADSGLEDDLFVSARPNIELLP-EGQFKYHVDFEHLHI-GEETGMICVSRPTNPTGNVI 197

Query: 236 NDEDLLKILEM----PILVVLDEAY------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
            DE+L+K+  +     I +V+D AY        FS             N+I+  + SK  
Sbjct: 198 TDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWN-----PNIILCMSLSK-L 251

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333
           GL G R G        I  +                   C  ++    L 
Sbjct: 252 GLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLR 301

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score = 89.5 bits (223), Expect = 3e-20
 Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 57/267 (21%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE +V+     +   E  Y  P    E+RE +                    + +    +
Sbjct: 56  PEPVVEEAVRFLQKGEVKYTDPRGIYELREGI-----------------AKRIGERYKKD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D ++V  GA + +      +LDPGD+++   P +  Y     + G  V  V      
Sbjct: 99  ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSK 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
           +F  ++E +   +   K K + + SPNNP G +   E L  +     +    ++ DE Y 
Sbjct: 159 NFQPSLEEVEGLL-VGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYD 217

Query: 258 EFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
                     +  +           D ++ +  FSK   + G RVGY      +   +  
Sbjct: 218 SLV-------YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAV-- 268

Query: 308 AK-QPY---NVSVAAEVAACAALQNPI 330
           +K Q +    ++  A+ AA  AL+   
Sbjct: 269 SKIQSHTTSCINTVAQYAALKALEVDN 295

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score = 89.5 bits (223), Expect = 3e-20
 Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 57/269 (21%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     I    N YG     PE+R+A+ +                    + +G++
Sbjct: 56  PEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVE-----------------REKRKNGVD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D + V     E + LI   +LDPGD+I+   P++  Y       G   V+     + 
Sbjct: 99  ITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYT 257
           D+  +++ I   +  ++ K I + +PNNP G++ + + L +IL +     I V+ DE Y 
Sbjct: 159 DWQPDIDDIRKKIT-DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY- 216

Query: 258 EFSGLESRMEWVKKH---------DNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLW 306
                   M +  +H           +IV+   SK     G R+GY  F  P + +  + 
Sbjct: 217 ------DLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR 270

Query: 307 RA--KQPY---NVSVAAEVAACAALQNPI 330
            A  +        +  A+ AA A L  P+
Sbjct: 271 EAIDRLARIRLCPNTPAQFAAIAGLTGPM 299

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 60/325 (18%), Positives = 121/325 (37%), Gaps = 57/325 (17%)

Query: 45  SSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE 104
           SS + +  +    Q      S   S + K     PI              + ++ +   +
Sbjct: 8   SSGVDLGTENLYFQSMW---SVRPSDMAKKTFN-PIRAIVDNMKVKPNPNKTMISLSIGD 63

Query: 105 -NPYG---PPPEVREAL------GQLKFPYIYPD----PESRRLRAALA-----KDSGLE 145
              +G     PEV +A+      G+      Y            R  +A      ++ LE
Sbjct: 64  PTVFGNLPTDPEVTQAMKDALDSGKYNG---YAPSIGFLS---SREEIASYYHCPEAPLE 117

Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--RKSD 202
           +  +++  G  + IDL +  + +PG  I+  P P F++Y+  A   G  V       +  
Sbjct: 118 AKDVILTSGCSQAIDLCLAVLANPGQNIL-VPRPGFSLYKTLAESMGIEVKLYNLLPEKS 176

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY-- 256
           + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y  
Sbjct: 177 WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGD 235

Query: 257 -----TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-------GAFPLSIIEY 304
                 ++  L +    +     ++     +KR  + G R+G+         F   I + 
Sbjct: 236 MVFSDCKYEPLAT----LSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291

Query: 305 LWRAKQP-YNVSVAAEVAACAALQN 328
           L +  Q         + A  + L  
Sbjct: 292 LVKLSQRILGPCTIVQGALKSILCR 316

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 49/251 (19%), Positives = 92/251 (36%), Gaps = 33/251 (13%)

Query: 101 DANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
               N Y P    PE REA+    +                   S +  D++++  G   
Sbjct: 65  SQECNGYFPTVGSPEAREAVAT-WW--------RNSFVHKEELKSTIVKDNVVLCSGGSH 115

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            I + +  + D GD  +   P F  YE      G  +       ++D+  +++ I    +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLESRMEWV 269
            +K K + +T+P+NP GS  + + +  I+ +     + +  DE Y    F G +    + 
Sbjct: 176 -DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT 234

Query: 270 -----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEYLWRAKQP-YNVSVA 317
                +     ++L   +K   + G R+G+  +        S +E L R           
Sbjct: 235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTV 294

Query: 318 AEVAACAALQN 328
            + A   AL N
Sbjct: 295 VQAALGEALLN 305

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 47/263 (17%), Positives = 86/263 (32%), Gaps = 49/263 (18%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  + +A+          +    Y   E     LR A+A      +G  +D I +  G+
Sbjct: 83  LPKYIADAMAKAAAGLATREGYSGYG-AEQGQGALREAVASTFYGHAGRAADEIFISDGS 141

Query: 156 DELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA--- 211
               D+  ++ +      +    P++ +Y   + + G          D    +       
Sbjct: 142 KC--DIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNH 199

Query: 212 ---DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF----- 259
              D  + ++   IF  SPNNP G+      L +++        ++V D AY  +     
Sbjct: 200 FFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD 259

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRA 308
              +  E  +      +  I   +FSK AG  G+R+G+         A    +     R 
Sbjct: 260 CPKTIYE--IPGAD--EVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV 315

Query: 309 KQP--YNVSVAAEVAACAALQNP 329
                   S   +    A LQ  
Sbjct: 316 MTTCFNGASNIVQAGGLACLQPE 338

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 49/260 (18%), Positives = 86/260 (33%), Gaps = 48/260 (18%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  +  A+         ++    Y   E   + LRAA+A       G+  D + V  GA
Sbjct: 70  IPEVITSAMAKKAHELSTIEGYSGYG-AEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGA 128

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL------ 209
              I  + + +      I    P++  Y   + + G           +     +      
Sbjct: 129 KCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPEN 187

Query: 210 --IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---- 259
               D     +   IF  SPNNP G+    E L +++E       ++V D AY  +    
Sbjct: 188 GFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD 247

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----- 311
              S  E  +   +  +  +   +FS  AG  G+R+G+   P  ++              
Sbjct: 248 NPRSIFE--IPGAE--EVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRI 303

Query: 312 -----YNVSVAAEVAACAAL 326
                   S  ++  A A L
Sbjct: 304 ICTCFNGASNISQAGALACL 323

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score = 87.5 bits (217), Expect = 2e-19
 Identities = 40/224 (17%), Positives = 89/224 (39%), Gaps = 30/224 (13%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFD 186
           LR A+A       G  ++   I +  GA   + L+M+ ++ +  D I+   P + +Y   
Sbjct: 139 LRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSAS 198

Query: 187 AAVNGAAVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDED 239
            A++G A+V       + + L    +   +E         + + + +P NP G ++ +E+
Sbjct: 199 IALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEEN 258

Query: 240 LLKILEM----PILVVLDEAYTE-----------FSGLESRMEWVKKHDNLIVLRTFSK- 283
              I++      ++++ DE Y E           F  +   + + ++   L+  ++ SK 
Sbjct: 259 QYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKG 318

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327
             G  G R GY            +  +  +V++ + +       
Sbjct: 319 YYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILAS 362

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score = 87.6 bits (217), Expect = 3e-19
 Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 27/236 (11%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYIYPD--PESRR--LRAALAKDSGL-- 144
           R     +    ++    P   + E   G L   Y  P          +R  + ++ G   
Sbjct: 101 RFLGKSLSYVRDQLGLDPAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADA 160

Query: 145 ---ESDHILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
              ES ++    G    +      L +  +L  GDK+    P FT Y     +   A+ +
Sbjct: 161 IPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEE 220

Query: 197 VPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM------P 247
           V   +D SLN +     +++      K  F  +P+NP    ++   L ++  +       
Sbjct: 221 VAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPD 280

Query: 248 ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           ++++ D+ Y  F+   +S        +N +++ +FSK  G  G R+G  A     +
Sbjct: 281 LMILTDDVYGTFADDFQSLFAICP--ENTLLVYSFSKYFGATGWRLGVVAAHQQNV 334

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score = 86.6 bits (215), Expect = 5e-19
 Identities = 47/266 (17%), Positives = 94/266 (35%), Gaps = 54/266 (20%)

Query: 107 YGPPPEVREALGQ---LKFPYIY-PDPESRRLRAALA----KDSGLESD--HILVGCGAD 156
           Y PP    +   +   +     Y P      L  +L          E    ++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS 260
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVY---- 243

Query: 261 GLESRMEWV----KKHDNLIVL-----RT-----FSKRAGLAGLRVGYG-AFPLSIIEYL 305
                 E +           +       T       K     G R+G+  +    ++ Y 
Sbjct: 244 ------EHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYA 297

Query: 306 WRAKQ--PYNVSVAAEVAACAALQNP 329
            +A     +      + A   ++ + 
Sbjct: 298 AKAHTRICFASPSPLQEACANSINDA 323

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score = 85.7 bits (213), Expect = 6e-19
 Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 32/206 (15%)

Query: 126 YPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           Y   E    LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++    
Sbjct: 70  YSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYM--- 126

Query: 185 FDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPDGSIIND 237
              A+      G   + VP   +   +++ + + ++RE+P+ ++   P+  NP G +   
Sbjct: 127 --GAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLY-LIPSFQNPTGGLTPL 182

Query: 238 EDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD------NLIVLRTFSKRA 285
               ++L+M     ++VV D+AY E  F    +R+  + +         +I L +FSK  
Sbjct: 183 PARKRLLQMVMERGLVVVEDDAYRELYFGE--ARLPSLFELAREAGYPGVIYLGSFSKV- 239

Query: 286 GLA-GLRVGYGAFPLSIIEYLWRAKQ 310
            L+ GLRV +       ++ L +AKQ
Sbjct: 240 -LSPGLRVAFAVAHPEALQKLVQAKQ 264

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score = 83.3 bits (206), Expect = 7e-18
 Identities = 45/233 (19%), Positives = 84/233 (36%), Gaps = 37/233 (15%)

Query: 134 LRAALA-----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD---CP-PTFTM 182
           +R  +A     +D G+ +D  +I +  GA + I  I++ ++  G K       P P + +
Sbjct: 134 IREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPL 193

Query: 183 YEFDAAVNGAAVVKVPRK--SDFSLNVE----LIADAVEREKPKCIFLTSPNNPDGSIIN 236
           Y    +   A  V       + ++LNV      + +A +   PK + + +P NP G + +
Sbjct: 194 YSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQS 253

Query: 237 DEDLLKILEM----PILVVLDEAYTEF------------SGLESRMEWVKKHDNLIVLRT 280
            + +  ++       + ++ DE Y +               L         +  L    +
Sbjct: 254 RKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHS 313

Query: 281 FSKR-AGLAGLRVGYGA---FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329
            SK   G  G R GY         I   L +          +  AA   + NP
Sbjct: 314 TSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNP 366

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score = 82.1 bits (203), Expect = 1e-17
 Identities = 37/236 (15%), Positives = 76/236 (32%), Gaps = 42/236 (17%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGA----DELIDLIMRCVLDPGDKIVDCP------ 177
              AL     +       S++I +  G+      L +L     ++   +  +        
Sbjct: 88  FIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSI 147

Query: 178 -----PTFTMYEFDAAVNGAAVVKVPR-----------KSDFSLNVELIADAVE--REKP 219
                P +  Y             +P               + ++ E + +       + 
Sbjct: 148 LLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRI 207

Query: 220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE-FSGLESRMEWVKKHDN 274
             I  + P NP G+++ DE++  + E+     I +++D AY   F  +      +   +N
Sbjct: 208 GAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNN 267

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328
            I+  + SK  GL G+R G       +IE +           +      A   + N
Sbjct: 268 TILCFSLSK-IGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVAN 322

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score = 79.5 bits (197), Expect = 8e-17
 Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 55/264 (20%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     +   +  Y PP   PE+REAL + KF                 +++GL 
Sbjct: 46  PEHVKEAARRALAQGKTKYAPPAGIPELREALAE-KF----------------RRENGLS 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              +  +V  G  + +  + + +LDPGD+++   P +  Y       G  VV+V    + 
Sbjct: 89  VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE 148

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
            F  + E +  A+   + K + + SPNNP G++   E L  +    +E    +V DE Y 
Sbjct: 149 GFVPDPERVRRAI-TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIY- 206

Query: 258 EFSGLESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                   + +  +H        ++ + +   +K   + G R+GY   P  +I+ +  A 
Sbjct: 207 ------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM--AS 258

Query: 310 -QPY---NVSVAAEVAACAALQNP 329
                  +    A+ A   AL N 
Sbjct: 259 VSRQSTTSPDTIAQWATLEALTNQ 282

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score = 77.5 bits (192), Expect = 3e-16
 Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 53/265 (20%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           P+ IV+     ++  +  YGP    P +REA+ Q K                  +D+GL 
Sbjct: 45  PKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQ-KL----------------QRDNGLC 87

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
             +D+ILV  G  + I  +M  +++PGD+++   P +  Y     +     V +P   ++
Sbjct: 88  YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET 147

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY- 256
            F ++ E I  A+   K K +   +P+NP G +   +++  I ++     + V+ DE Y 
Sbjct: 148 QFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE 206

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
                  +   + +        +  +V   F+K   + G RVG+ A P+ ++    +A  
Sbjct: 207 KILYDDAQHLSIGAASPEAY--ERSVVCSGFAKTYAMTGWRVGFLAGPVPLV----KAAT 260

Query: 311 PY------NVSVAAEVAACAALQNP 329
                   NV   A+  A AA +N 
Sbjct: 261 KIQGHSTSNVCTFAQYGAIAAYENS 285

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 77.8 bits (192), Expect = 4e-16
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 33/193 (17%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVN-----GAAVV 195
           S LE   +++       +       L    K++    P      +D         G  ++
Sbjct: 96  SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMI-VTVPG-----YDRHFLLLQTLGFELL 149

Query: 196 KVPRKSDFSLNVELIADAV-EREKPKCIFLTSPN--NPDGSIINDEDLLKILEMP----- 247
            V  +SD   +V+ +          K I    P   NP G  I+ E   ++  +      
Sbjct: 150 TVDMQSD-GPDVDAVERLAGTDPSVKGIL-FVPTYSNPGGETISLEKARRLAGLQAAAPD 207

Query: 248 ILVVLDEAYTE--FSG-----LESRMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAF 297
             +  D+AY              + +   +     D   V  + SK    AG  +G+ A 
Sbjct: 208 FTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-FAGAGLGFVAS 266

Query: 298 PLSIIEYLWRAKQ 310
               I +L +   
Sbjct: 267 SEDNIRWLSKYLG 279

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 43/217 (19%)

Query: 126 YPDPE-SRRLRAALAK-------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177
           Y   E    L+  + K        +GL+ D+++   G+ + +DLI +  LD     V   
Sbjct: 81  YSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140

Query: 178 PTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLT 225
           P +       A+N      A  V VP + D  +++ ++   +         ++ K I+  
Sbjct: 141 PAYL-----GAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIY-V 193

Query: 226 SPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDN 274
             N  NP G   + E    ++E+     + +V D+ Y    + G    ++ +      + 
Sbjct: 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKIGGPER 251

Query: 275 LIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310
           +++L TFSK   LA GLR+G  A     I  + +AKQ
Sbjct: 252 VVLLNTFSKV--LAPGLRIGMVAGSKEFIRKIVQAKQ 286

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 76.6 bits (189), Expect = 8e-16
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--DLIMRCVL------------DPGDKIVDCP-P 178
           +R   A+  GL +D ++   G+   I  DLI                 +   K + CP P
Sbjct: 81  IRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWL-CPVP 139

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D         G  ++ VP   +   ++ ++ + V+  + K ++ T P   NP 
Sbjct: 140 GY-----DRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMW-TVPVFGNPT 192

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG----LESRMEWVKKHDN---LIV 277
           G   +++   ++ EM        +V D AY     S     + + +E+ +   N      
Sbjct: 193 GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWF 252

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
           + + SK    AG  V + A     IE+      
Sbjct: 253 MSSTSK-ITHAGSGVSFFASSKENIEWYASHAN 284

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 43/269 (15%)

Query: 103 NENPYGPPPEVREALGQLK----FPYIYPD--PESRRLRAALAK--DSGLESDH---ILV 151
           N++       +      L     FPY  P    E R L        +  L  D+    +V
Sbjct: 59  NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIV 118

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVEL 209
                  + L+    ++  D I+     +  Y+        A ++       D     + 
Sbjct: 119 TNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDS 178

Query: 210 IADAVEREKPKC---IFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYT 257
           + +A++    K    + L  PNNP G     +++  I+E           ++ V+D+AY 
Sbjct: 179 LVEALQ-SYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY 237

Query: 258 EF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                     S   +           I L   +K     G RVG+  F  S        +
Sbjct: 238 GLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLE 297

Query: 310 QP------YNVS---VAAEVAACAALQNP 329
                    N+S   +  + A    L+N 
Sbjct: 298 AKVKGLIRSNISSGPLPTQSAVKHVLKNN 326

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 40/214 (18%)

Query: 126 YPDPE-SRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           Y        LR  LA    K   LE   ++I++  G    +DL+ R ++DPGD ++   P
Sbjct: 71  YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENP 130

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN 228
           ++        +      GA +  VP  +D  + V+L+ + ++      +K K I+ T P 
Sbjct: 131 SYI-----NTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIY-TIPT 183

Query: 229 --NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD---NLIV 277
             NP G  ++ E    +LE+     +L++ D AY    + G    +  +K  D    +IV
Sbjct: 184 GQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG--GDIVPLKALDNEGRVIV 241

Query: 278 LRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310
             T SK   L  G R+G+      I++ +   KQ
Sbjct: 242 AGTLSKV--LGTGFRIGWIIAEGEILKKVLMQKQ 273

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 39/213 (18%)

Query: 126 YPDPE-SRRLRAALA---KDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           Y   +    LR  L           + + I++  G+ + +DLI R  L+PGD +V   PT
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPT 173

Query: 180 FTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN- 228
           +      AA+          +++P   +  + VE++ + ++      +K K ++ T P  
Sbjct: 174 YL-----AALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVY-TVPTF 226

Query: 229 -NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDNLIVL 278
            NP G  +N++    +LE+      +VV D+ Y E  +SG  +  + +K       +I L
Sbjct: 227 QNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALDNEGRVIYL 284

Query: 279 RTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310
            TFSK   LA G R+G+      II  +  AKQ
Sbjct: 285 GTFSKI--LAPGFRIGWMVGDPGIIRKMEIAKQ 315

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--------------DLIMRCVLDPGDKIVDCP-P 178
           +R   A   G+  + +L G  +   I              D +     +   K + CP P
Sbjct: 83  IRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWI-CPVP 141

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D   +     G  ++ VP   D   +++ + + V+  + K ++   P   NP 
Sbjct: 142 GY-----DRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMW-VVPVFSNPT 194

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG-------LESRMEWVKKHDNLIV 277
           G  + ++   ++  M        VV D AY     +        +    E     +    
Sbjct: 195 GFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
             + SK   LAG  V +        ++      
Sbjct: 255 FTSTSK-ITLAGAGVSFFLTSAENRKWYTGHAG 286

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 53/287 (18%), Positives = 99/287 (34%), Gaps = 55/287 (19%)

Query: 65  SFIRSHLRKLKPYQP-------------ILPFEVLSIQLGRKPEDIVKIDANENP--YGP 109
           S IR+    L                  + PF+   I +          +  +    Y P
Sbjct: 17  SPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSP 76

Query: 110 P---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166
               PE+   L QL+                +          + V  G+ + +  +   +
Sbjct: 77  SAGIPELLSWLKQLQ--------IKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI 128

Query: 167 LDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------- 216
           ++PGD ++   P +  T+        G  ++ V       +  + + D + R        
Sbjct: 129 INPGDNVLLDEPAYSGTLQSLHPL--GCNIINVASDES-GIVPDSLRDILSRWKPEDAKN 185

Query: 217 ---EKPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME 267
                PK ++ T PN  NP G+ +  E   +I E+      L++ D+ Y      + R+ 
Sbjct: 186 PQKNTPKFLY-TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVP 244

Query: 268 WVKKHD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310
                D    +I   +FSK   ++ GLR+G+   P  +IE +    Q
Sbjct: 245 TFLSMDVDGRVIRADSFSKI--ISSGLRIGFLTGPKPLIERVILHIQ 289

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 49.4 bits (119), Expect = 7e-07
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 37/217 (17%)

Query: 109 PPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADELID 160
             P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     ++ 
Sbjct: 42  TAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVS 101

Query: 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVE 215
            ++R   + G+ +V   P +    F  A+  N   V+ V  +     +  ++  +   + 
Sbjct: 102 ELIRQWSETGEGVVIHTPAY--DAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 159

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFSG 261
           + + K + L SP NP G +   ++L  + ++     + V+ DE           +  +S 
Sbjct: 160 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 219

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           +           +  +L + SK   +  L   YG   
Sbjct: 220 V--------ARGDWALLTSGSKSFNIPALTGAYGIIE 248

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 43/250 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           P PE++EA+    +     Y Y + +   L  A+        D  +  + IL   G    
Sbjct: 75  PVPEIKEAIINYGREHIFGYNYFNDD---LYQAVIDWERKEHDYAVVKEDILFIDGVVPA 131

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++   + GD ++   P +  Y F   +  N   +V+   +     F ++ E +   
Sbjct: 132 ISIALQAFSEKGDAVLINSPVY--YPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKD 189

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L SP+NP G + +++DL+KI E+     +++V DE           +   
Sbjct: 190 IIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSL 249

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + L++  +     D  I+L + +K   +AG +  +            +Y   A   + V 
Sbjct: 250 NTLDASYK-----DFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVP 304

Query: 316 VAAEVAACAA 325
               +A  AA
Sbjct: 305 TVGMIATQAA 314

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 43/250 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PEV++A+    +     Y Y   E   L  A+            + + I+   G    
Sbjct: 45  VMPEVKQAIHDYAEQLVYGYTYASDE---LLQAVLDWEKSEHQYSFDKEDIVFVEGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++     G+ ++   P +    F  +V  N   +V    K +   F ++ E + + 
Sbjct: 102 ISIAIQAFTKEGEAVLINSPVY--PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLEND 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L +P+NP G +   E L +I  +     +++V DE           +  F
Sbjct: 160 IVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + +          D  +VL + +K   +AG +  Y         +  ++       + VS
Sbjct: 220 NTVSPDF-----KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVS 274

Query: 316 VAAEVAACAA 325
               +A   A
Sbjct: 275 SLGYIATETA 284

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 44/275 (16%), Positives = 80/275 (29%), Gaps = 106/275 (38%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK 140
           + FE    Q   K  DI+ +   E+ +     V           +  D      ++ L+K
Sbjct: 7   MDFETGEHQYQYK--DILSV--FEDAF-----VDN----FDCKDV-QD----MPKSILSK 48

Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF------TMYEF--------- 185
           +   E DHI++   A      +   +L   +++V     F        Y+F         
Sbjct: 49  E---EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---KFVEEVLRINYKFLMSPIKTEQ 102

Query: 186 --------------DAAVNGAAVVK---VPRKSDF--------SLNVE------------ 208
                         D   N   V     V R   +         L               
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 209 ---LIADAVEREKPKC-----IF-LTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE- 258
              +  D     K +C     IF L        +  + E +L++L+  +L  +D  +T  
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNL-----KNCNSPETVLEMLQK-LLYQIDPNWTSR 216

Query: 259 ---FSGLESRMEWVKKHDN-----------LIVLR 279
               S ++ R+  ++               L+VL 
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 22/120 (18%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLG--RKPEDIVKIDANENPYGPPPEVREALGQLKF 122
           S I  HL+ ++  + +  F ++ +      +     KI  +   +     +   L QLKF
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ-----KIRHDSTAWNASGSILNTLQQLKF 529

Query: 123 --PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELI----DLIMRCVLDPGDKIVD 175
             PYI   DP+  RL  A+           L     + +     DL+   ++   + I +
Sbjct: 530 YKPYICDNDPKYERLVNAIL--------DFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 46/337 (13%), Positives = 97/337 (28%), Gaps = 110/337 (32%)

Query: 67  IRSHLRKLKPYQPI--------------------------LPFEVLSIQLGR--KPEDIV 98
           +R  L +L+P + +                          + F++  + L     PE ++
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 99  KIDAN-----ENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           ++        +  +    +             +      R+ +  A+   L        C
Sbjct: 200 EMLQKLLYQIDPNWTSRSD-------------HSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 154 GADELIDLIMRCVLDPGDKIVD-----CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
               L  L++  V +   K  +     C    T       V     +     +  SL  +
Sbjct: 247 ----L--LVLLNVQNA--KAWNAFNLSCKILLTTR--FKQV--TDFLSAATTTHISL--D 292

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDL----LKILEMPILV-VLDEAYTEFSGLE 263
             +  +  ++ K + L   +         +DL    L     P  + ++ E+  +     
Sbjct: 293 HHSMTLTPDEVKSLLLKYLD------CRPQDLPREVLTT--NPRRLSIIAESIRDGL--- 341

Query: 264 SRME-WVKKHDNLIVLRTFSKRAGLAGL-----RVGYGAF---------PLSIIEYLWRA 308
           +  + W  KH N   L T  + + L  L     R  +            P  ++  +W  
Sbjct: 342 ATWDNW--KHVNCDKLTTIIESS-LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398

Query: 309 KQPYNV-SVAAE-VAACAALQNP---------IYLEV 334
               +V  V  +        + P         IYLE+
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 47.5 bits (114), Expect = 3e-06
 Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 39/219 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PE+  ++ + LK     Y     E      A+A        +  + D  +   G    
Sbjct: 41  IAPEIMASMEEKLKVAAFGYESVPAE---YYKAVADWEEIEHRARPKEDWCVFASGVVPA 97

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I  ++R    PGD+I+   P +    F + +  NG  V+      +   +S+N   + + 
Sbjct: 98  ISAMVRQFTSPGDQILVQEPVY--NMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEK 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     + +   +P+NP G   ++E++ +I E+     +L++ DE            T  
Sbjct: 156 LATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPA 215

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             ++   +     + ++ L + SK   LA L       P
Sbjct: 216 FTVDWDAK-----NWVVSLISPSKTFNLAALHAACAIIP 249

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 47.1 bits (113), Expect = 4e-06
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 43/250 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
            PPE+ E L + L      Y  P  E    +  + K         +++D I+   G    
Sbjct: 45  NPPELIEGLKKYLDETVLGYTGPTEE---YKKTVKKWMKDRHQWDIQTDWIINTAGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           +   +R    PGD ++   P +  Y F  A+      +++         ++++ + +   
Sbjct: 102 VFNAVREFTKPGDGVIIITPVY--YPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKL 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
            + +  K +   SP+NP G +   ++L KI ++     +++  DE           +T F
Sbjct: 160 SKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
             ++ ++      D  I     SK   +AG+ +                   A      +
Sbjct: 220 QSIDEQL-----ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFT 274

Query: 316 VAAEVAACAA 325
                A    
Sbjct: 275 TLGYKACEIC 284

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 46.7 bits (112), Expect = 5e-06
 Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 41/245 (16%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P V +A+   ++     Y         L  A A+            + I         
Sbjct: 37  TCPAVLQAITDAVQREAFGYQPDGSL---LSQATAEFYADRYGYQARPEWIFPIPDVVRG 93

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVER 216
           + + +        K++   P +    F   +       + +       +N+  +     +
Sbjct: 94  LYIAIDHFTPAQSKVIVPTPAY--PPFFHLLSATQREGIFIDAT--GGINLHDVEKGF-Q 148

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE---------AYTEFSGLE 263
              + I L +P NP G +   E L ++ ++       V++DE          +T  +G+ 
Sbjct: 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVS 208

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEV 320
                       I +   SK   +AGL+     F        W+   P      S    +
Sbjct: 209 DTAA-----SVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLI 263

Query: 321 AACAA 325
           AA AA
Sbjct: 264 AAEAA 268

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 36/226 (15%), Positives = 79/226 (34%), Gaps = 54/226 (23%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P + ++L   L+     Y            ++        +  ++S+ ++   G    
Sbjct: 46  AAPCIIDSLKNRLEQEIYGYTTRPDS---YNESIVNWLYRRHNWKIKSEWLIYSPGVIPA 102

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKS--------DFSLNVE 208
           I L++  +    DKI+   P +    F++ V  N   ++  P +         D+     
Sbjct: 103 ISLLINELTKANDKIMIQEPVY--SPFNSVVKNNNRELIISPLQKLENGNYIMDY----- 155

Query: 209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE-------- 254
              + +E   +  K   L +P+NP G +   ++L K+ ++     + ++ DE        
Sbjct: 156 ---EDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK 212

Query: 255 --AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
              +   + +           N I     +K   +AGL+  Y   P
Sbjct: 213 KHKHIPMASISKEF-----EKNTITCMAPTKTFNIAGLQSSYVVLP 253

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	334
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.98
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.96
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.97
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.97
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.97
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.97
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.97
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.97
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.97
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.97
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.96
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.96
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.96
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.95
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.95
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.95
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.95
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.95
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.94
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.94
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.94
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.94
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.94
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.94
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.94
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.94
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.94
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.94
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.93
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.93
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.93
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.93
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.93
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.93
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.93
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.93
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.93
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.93
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.92
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.92
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.92
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.92
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.92
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.92
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.92
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.92
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.92
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.92
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.92
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.92
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.92
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.92
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.92
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.92
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.92
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.92
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.92
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.92
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.91
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.91
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.91
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.91
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.91
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.91
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.91
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.9
1svv_A	359	Threonine aldolase; structural genomics, structura	99.9
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.9
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.9
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.9
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.9
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.9
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.9
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.9
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.9
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.89
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.89
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.89
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.89
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.89
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.89
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.89
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.89
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.89
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.89
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.89
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.88
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.88
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.88
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.88
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.88
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.88
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.88
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.88
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.88
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.88
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.88
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.88
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.88
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.88
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.88
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.88
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.88
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.87
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.87
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.86
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.86
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.86
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.86
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.86
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.86
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.86
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.86
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.86
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.86
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.86
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.85
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.85
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.85
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.85
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.85
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.85
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.84
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.84
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.84
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.84
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.84
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.84
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.84
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.83
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.83
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.83
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.82
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.82
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.8
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.8
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.79
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.79
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.79
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.78
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.64
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.74
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.73
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.72
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.72
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.71
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.71
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.71
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.69
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.69
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.68
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.68
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.62
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.52
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.48
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.43
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.37
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.35
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.21
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.17
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.13
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.08
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	98.94
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	98.93
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	98.85

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=5.6e-40  Score=309.18  Aligned_cols=264  Identities=34%  Similarity=0.516  Sum_probs=228.6

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      +++++..+.+|.+......++++++.  +++|+|+.|++++++++++++++.+ +.....||+.+..++|++++++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~   83 (363)
T 3ffh_A            6 WKKSLAGLSSYKPGKREEEVMAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLE   83 (363)
T ss_dssp             CCGGGTTCCC----CHHHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCC
T ss_pred             hhHHHHhCCCCCCCCCHHHHHHhcCC--CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHhCCC
Confidence            35667778888777777777777665  5789999999999999999999987 44557788888999999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.+.++.+|+++++++++ +++++|+++
T Consensus        84 ~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~  162 (363)
T 3ffh_A           84 EEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-EKTTIVWIC  162 (363)
T ss_dssp             GGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-TTEEEEEEE
T ss_pred             hhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-cCCCEEEEe
Confidence            9999999999999999999999999999999999999999999999999999987688999999999997 689999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||||||.+++.+++.++++.   ++++|+||+|.+|.++.  .........+++++++||||.||++|+|+||++++++
T Consensus       163 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  242 (363)
T 3ffh_A          163 NPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKE  242 (363)
T ss_dssp             SSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHH
T ss_pred             CCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHH
Confidence            999999999999999999986   89999999999887621  2334445678999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868          301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       301 ~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      +++.+......++++.++|.++.++|++.++++
T Consensus       243 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  275 (363)
T 3ffh_A          243 IIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIG  275 (363)
T ss_dssp             HHHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHH
Confidence            999999998899999999999999998876643

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=2.2e-40  Score=312.37  Aligned_cols=250  Identities=33%  Similarity=0.558  Sum_probs=217.6

Q ss_pred             HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (334)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~  145 (334)
                      ++++.+..+.+|.+....         ...++|+|+.|+|++++|+.+     .+....+||+++..++|+++|++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~~~~~~~v-----a~~~~~~Y~~~~~~~lr~~la~~~~~~   74 (356)
T 1fg7_A            9 LARENVRNLTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAQYAGVK   74 (356)
T ss_dssp             HSCHHHHHCCCCCCCCCC---------TTTCSEECSSCCCSSCCCCCC-----CCCCTTSCCCSSCHHHHHHHHHHHTSC
T ss_pred             HhhHHHHhcCCCCCCccc---------CCCceEEeeCCCCCCCCCHhH-----hhhhhccCCCccHHHHHHHHHHHhCCC
Confidence            356778888887654321         124689999999999988876     233447798888899999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       146 ~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      +++|++|+|+++++..++++++++| |+|+++.|+|..|...++..|++++.++.+++|.+|+++++++++  ++++|++
T Consensus        75 ~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~v~l  152 (356)
T 1fg7_A           75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYV  152 (356)
T ss_dssp             GGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEEEEEE
T ss_pred             hHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc--CCCEEEE
Confidence            9999999999999999999999999 999999999999999999999999999977778899999999886  7899999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ++||||||.+++.+++++|++.   ++++|+||+|.+|....+........+++++++||||.||++|+|+||+++++++
T Consensus       153 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  232 (356)
T 1fg7_A          153 CSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV  232 (356)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred             eCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence            9999999999999999999875   8999999999988732233333455688999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       302 i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      ++.+.+....|++|.++|.++.++|++.++
T Consensus       233 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~  262 (356)
T 1fg7_A          233 INLLMKVIAPYPLSTPVADIAAQALSPQGI  262 (356)
T ss_dssp             HHHHHHHSCSSCSCHHHHHHHHHHTSHHHH
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCccH
Confidence            999999988899999999999999987654

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=7.8e-40  Score=308.44  Aligned_cols=261  Identities=32%  Similarity=0.561  Sum_probs=232.6

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCC
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~  146 (334)
                      ++++..+.+|.+......++++++.  +++|+|+.|++++++++.+++++.+ +....+||+....++|+++|+++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~   82 (365)
T 3get_A            5 NEFLNNLSNYEPGKDIEVIAKEYGV--KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQN   82 (365)
T ss_dssp             CGGGGGSCCCCCCCCHHHHHHHTTC--SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCG
T ss_pred             chhHhhcCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHhCCCc
Confidence            4667788999888888888888776  5789999999999999999999876 444577877655899999999999999


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      ++|++|+|+++++..++..++++||+|+++.|+|..+...++..|++++.++. ++++ +|+++++++++ +++++|+++
T Consensus        83 ~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~  160 (365)
T 3get_A           83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC  160 (365)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred             ceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence            99999999999999999999999999999999999999999999999999996 6678 99999999997 789999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCcc---CC---CCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFS---GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~---~~---~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      +||||||.+++.+++.+|++.   ++++|+||+|.++.   .+   .+........+++++++||||.||++|+|+||++
T Consensus       161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  240 (365)
T 3get_A          161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI  240 (365)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence            999999999999999999984   89999999999877   32   2233344557899999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +++++++.+.+....++++.++|.++.++|++.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  276 (365)
T 3get_A          241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFT  276 (365)
T ss_dssp             ECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHH
T ss_pred             cCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHH
Confidence            999999999999999999999999999999986654

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=9.5e-39  Score=299.56  Aligned_cols=240  Identities=26%  Similarity=0.393  Sum_probs=217.7

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      .++++|+|+.|++++++++++++++.+ +.....||+.+..++|+++|+++++++++|++|+|+++++..+++.++++||
T Consensus        14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd   93 (354)
T 3ly1_A           14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEA   93 (354)
T ss_dssp             CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTC
T ss_pred             CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCC
Confidence            457789999999999999999999886 4455778888889999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC---C
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM---P  247 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~  247 (334)
                      +|+++.|+|..+...++..|++++.++.+.++.+|++++++++++ +++++|++++||||||.+++.+++.+|++.   +
T Consensus        94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~  173 (354)
T 3ly1_A           94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN  173 (354)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTT
T ss_pred             eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCC
Confidence            999999999999999999999999999877799999999999974 589999999999999999999999999986   8


Q ss_pred             CeEEEccCCcCccCCC---CchhhhcCC-CcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 019868          248 ILVVLDEAYTEFSGLE---SRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (334)
Q Consensus       248 ~~lIvDeay~~~~~~~---~~~~~~~~~-~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~  323 (334)
                      +++|+||+|.++.+.+   ......... +++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.
T Consensus       174 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (354)
T 3ly1_A          174 TMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAAL  253 (354)
T ss_dssp             EEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHH
T ss_pred             eEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            9999999999987654   333444455 899999999999999999999999999999999999888999999999999


Q ss_pred             HHhcCchhh
Q 019868          324 AALQNPIYL  332 (334)
Q Consensus       324 ~~L~~~~~~  332 (334)
                      ++|++.+++
T Consensus       254 ~~l~~~~~~  262 (354)
T 3ly1_A          254 ASMNDSAFI  262 (354)
T ss_dssp             HHTTCHHHH
T ss_pred             HHhcCHHHH
Confidence            999986654

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=2.6e-38  Score=300.87  Aligned_cols=234  Identities=25%  Similarity=0.384  Sum_probs=201.2

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+.++|+|+.|++++++++.+.+++.+ +. ....|+. .|..++|+++++++    |  +++++|++|+|+++++..++
T Consensus        29 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~  108 (385)
T 1b5p_A           29 QGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF  108 (385)
T ss_dssp             TTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence            456789999999999999999888765 32 2356855 47899999999987    3  46789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      .+++++||+|+++.|+|..|...++..|++++.++.+  +++.+|+++++++++ +++++|++++||||||.+++.++++
T Consensus       109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~l~  187 (385)
T 1b5p_A          109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNPTGAVYPKEVLE  187 (385)
T ss_dssp             HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-CCCEEEEEeCCCCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999999965  467899999999997 5789999999999999999988888


Q ss_pred             HHHhC----CCeEEEccCCcCccCCCC--chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      +|++.    +++||+||+|.++.+++.  ....+.. +++++++||||.||++|+|+||+++++++++.+.+.+..  ++
T Consensus       188 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~  266 (385)
T 1b5p_A          188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS  266 (385)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence            88764    899999999999886432  1222223 789999999999999999999999999999988876654  57


Q ss_pred             CcHHHHHHHHHHhcC
Q 019868          314 VSVAAEVAACAALQN  328 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~  328 (334)
                      ++.++|.++.++|++
T Consensus       267 ~~~~~~~a~~~~l~~  281 (385)
T 1b5p_A          267 PDTIAQWATLEALTN  281 (385)
T ss_dssp             CCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHhC
Confidence            899999999999965

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=8.5e-38  Score=294.37  Aligned_cols=253  Identities=32%  Similarity=0.509  Sum_probs=218.7

Q ss_pred             HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHH
Q 019868           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAK  140 (334)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~  140 (334)
                      ++++.+..+.+|.+...        ..++.++|+|+.|++++++++++++++.+ +..    ..+||+.+..++|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~--------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~   76 (360)
T 3hdo_A            5 PLRQNIASMKGYIPGYQ--------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGE   76 (360)
T ss_dssp             CCCHHHHHCCCCCCCCC--------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHH
T ss_pred             hhHHHHHhcCCcCCCCC--------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHH
Confidence            45778888999875432        12456799999999999999999999876 333    467888778999999999


Q ss_pred             hcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       141 ~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      ++++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++.++++.+  +++++.   .+++
T Consensus        77 ~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~---~~~~  151 (360)
T 3hdo_A           77 LYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER---YEGK  151 (360)
T ss_dssp             HHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS---BCSS
T ss_pred             HhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh---cCCC
Confidence            99999999999999999999999999999999999999999999999999999999997666655  444333   3467


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ++++++|+||||.+++.+++.+|++. ++++|+||+|.+|... .........+++++++||||.||++|+|+||+++++
T Consensus       152 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  230 (360)
T 3hdo_A          152 VFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP  230 (360)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred             EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence            99999999999999999999999987 9999999999988543 344445567899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       300 ~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      ++++.+.+....++++.++|.++.++|++.+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  263 (360)
T 3hdo_A          231 EVIAALDKIRDHYNLDRLAQAACVAALRDQAYL  263 (360)
T ss_dssp             HHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHH
Confidence            999999999988999999999999999986654

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=9.8e-38  Score=290.49  Aligned_cols=231  Identities=28%  Similarity=0.370  Sum_probs=205.5

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      .+++.|+|+.|+|+++++|.+.+++.+ .....+||+++..+||+++|+++++++++|++|+|+++++..++..+  +||
T Consensus        14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd   91 (337)
T 3p1t_A           14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM   91 (337)
T ss_dssp             CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTS
T ss_pred             CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCC
Confidence            456789999999999999999999886 44457788888999999999999999999999999999999999976  999


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeE
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~l  250 (334)
                      +|+++.|+|..|...++..|++++.++.++++.+|++++++.   .+++++++++||||||.+++.+++.++++. +. +
T Consensus        92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~  167 (337)
T 3p1t_A           92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L  167 (337)
T ss_dssp             EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-E
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-E
Confidence            999999999999999999999999999877889999999876   357999999999999999999999999987 54 6


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      |+||+|.+|......  .....+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++.+
T Consensus       168 ivDea~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~  245 (337)
T 3p1t_A          168 LIDETYVDYSSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR  245 (337)
T ss_dssp             EEECTTGGGSSCSSS--CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH
T ss_pred             EEECCChhhcccccc--ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH
Confidence            779999988754322  123457899999999999999999999999999999999888888999999999999999854


Q ss_pred             h
Q 019868          331 Y  331 (334)
Q Consensus       331 ~  331 (334)
                      +
T Consensus       246 ~  246 (337)
T 3p1t_A          246 A  246 (337)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=4.9e-37  Score=289.58  Aligned_cols=255  Identities=27%  Similarity=0.403  Sum_probs=215.7

Q ss_pred             hCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEe
Q 019868           74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVG  152 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t  152 (334)
                      +.++.++..+..++++++.++.++|||+.|++++++++.+.+++.+ +.....|++.+..++|+++|+++++++++|++|
T Consensus         3 ~~~~~~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~v~~~   82 (364)
T 1lc5_A            3 LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAG   82 (364)
T ss_dssp             CCCCSSSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred             CcccCCCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHCcCHHHEEEC
Confidence            3455566666667777888777899999999999999999999876 333467877788999999999999988999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +|+++++..+++.+  +||+|+++.|+|..+...++..|++++.++.+.  ++.+ ++++.+.+. +++++|++++||||
T Consensus        83 ~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~-~~~~~v~i~~p~np  158 (364)
T 1lc5_A           83 NGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT-PDLDCLFLCTPNNP  158 (364)
T ss_dssp             SSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC-TTCCEEEEESSCTT
T ss_pred             CCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc-CCCCEEEEeCCCCC
Confidence            99999999999987  789999999999999999999999999999653  3443 466666665 57899999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHH
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEY  304 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~  304 (334)
                      ||.+++.+++++|++.    ++++|+||+|.++.+++ +.....+..+++++++||||.||++|+|+||++ +++++++.
T Consensus       159 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  238 (364)
T 1lc5_A          159 TGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR  238 (364)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHH
Confidence            9999997777776654    99999999999887642 334444556889999999999999999999999 99999999


Q ss_pred             HHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          305 LWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       305 l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +.+....+++|.++|.++.++|++.+++
T Consensus       239 l~~~~~~~~~~~~~~~~~~~~l~~~~~~  266 (364)
T 1lc5_A          239 MRRQQMPWSVNALAALAGEVALQDSAWQ  266 (364)
T ss_dssp             HHHHSCTTCSCHHHHHHHHHGGGCHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHhCcHHH
Confidence            9988888999999999999999986554

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=4.3e-37  Score=289.86  Aligned_cols=254  Identities=37%  Similarity=0.592  Sum_probs=222.7

Q ss_pred             hHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHh
Q 019868           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKD  141 (334)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~  141 (334)
                      .++++.+..+.+|.+.            .+.++|+|+.|++++++++++.+++.+ +.  ...+|++.+..++|++++++
T Consensus        12 ~~~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~   79 (367)
T 3euc_A           12 RIIRDDVRAMGAYHVP------------DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV   79 (367)
T ss_dssp             HHSCHHHHHSCCSSCC------------CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCC------------CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH
Confidence            4456777778887542            235789999999999999999998876 33  34678888899999999999


Q ss_pred             cCC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          142 SGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       142 ~~~-~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +|+ ++++|++|+|+++++..+++.++++||+|+++.|+|..+...++..|++++.++.+.++.+|++++++++++.+++
T Consensus        80 ~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~  159 (367)
T 3euc_A           80 MQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA  159 (367)
T ss_dssp             HTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred             hCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence            998 7889999999999999999999999999999999999999999999999999998778899999999999744899


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      +|++++||||||.+++.+++++|++.      ++++|+||+|.+|... .....+...+++++++||||. +++|+|+||
T Consensus       160 ~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~  237 (367)
T 3euc_A          160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGY  237 (367)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-CSGGGGGTCTTEEEEEECCCT-TSCSCCEEE
T ss_pred             EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-chHHHHhhCCCEEEEecchhh-cccccCcee
Confidence            99999999999999999999988753      4999999999998753 344455667899999999998 999999999


Q ss_pred             eEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          295 GAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       295 l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +++++++++.+.+....++.+.++|.++.++|++.+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  275 (367)
T 3euc_A          238 VAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVL  275 (367)
T ss_dssp             EEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHH
T ss_pred             eeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHH
Confidence            99999999999998888999999999999999986554

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=2.8e-37  Score=293.80  Aligned_cols=240  Identities=23%  Similarity=0.341  Sum_probs=205.6

Q ss_pred             CCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C---CCCC-CEEEeCCHHHHHHH
Q 019868           92 RKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~---~~~~-~I~~t~G~~~~i~~  161 (334)
                      .+++++|+|+.|++++++++.+.+++.+ +.....|++. |..++|+++++++    |   ++++ +|++|+|+++++..
T Consensus        27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~  106 (396)
T 3jtx_A           27 PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS  106 (396)
T ss_dssp             CTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred             ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence            3467899999999999999999999886 3444678654 7899999999886    5   4588 99999999999999


Q ss_pred             HHHHhcCCC-----CEEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++++++++|     |+|+++.|+|..|...++..|++++.++. ++++.+|+++++++++ +++++|++++||||||.++
T Consensus       107 ~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~nptG~~~  185 (396)
T 3jtx_A          107 FVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-KRTKLVFVCSPNNPSGSVL  185 (396)
T ss_dssp             HHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HTEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc-cCcEEEEEECCCCCCCCcC
Confidence            999999997     79999999999999999999999999996 3456789999999887 4899999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCCC-Cchhhh-------cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWV-------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~~~-------~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +.+++++|++.    ++++|+||+|.++.+.+ ......       ...+++++++||||.|+++|+|+||+++++++++
T Consensus       186 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (396)
T 3jtx_A          186 DLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK  265 (396)
T ss_dssp             CHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHH
Confidence            99998877764    99999999999988654 222221       1368999999999999999999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      .+.+....  ++++.++|.++.++|++.+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  296 (396)
T 3jtx_A          266 NFLLYRTYHGSAMSIPVQRASIAAWDDEQHV  296 (396)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHHCCHHH
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHhCCHHHH
Confidence            88876553  789999999999999886654

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=5.2e-36  Score=287.86  Aligned_cols=245  Identities=14%  Similarity=0.152  Sum_probs=193.9

Q ss_pred             HHHHHHHhCCC-CCCeeecCCCCC-----CCCCCHHHHHHHhcC----cCCCCC-CCcChHHHHHHHHHhc-C-----CC
Q 019868           83 FEVLSIQLGRK-PEDIVKIDANEN-----PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LE  145 (334)
Q Consensus        83 ~~~~~~~~~~~-~~~~i~l~~~~~-----~~~~~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA~~~-~-----~~  145 (334)
                      +..+..++... ..++|+|+.|++     ++.+++.++++.. +    ...++| |..|.++||+++++++ +     ++
T Consensus        16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~   94 (405)
T 3k7y_A           16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE   94 (405)
T ss_dssp             HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred             HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence            44455554443 357899999973     2456788888855 3    234678 5679999999999987 2     23


Q ss_pred             CCC--EEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc-CC
Q 019868          146 SDH--ILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER-EK  218 (334)
Q Consensus       146 ~~~--I~~t~G~~~~i~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~-~~  218 (334)
                      +++  |++|+|+++++.+++..+++  | |+|++++|+|+.|...++..|++++.+|.  +++|++|++.+++++++ .+
T Consensus        95 ~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~  173 (405)
T 3k7y_A           95 DKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN  173 (405)
T ss_dssp             TTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS
T ss_pred             ccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC
Confidence            454  59999999999999998887  8 99999999999999999999999999985  34689999999999864 35


Q ss_pred             ceEEEEeCC-CCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-C----ch-hhhcCCCcEEEEcCCchhhcc
Q 019868          219 PKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S----RM-EWVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       219 ~~~i~l~~p-~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~----~~-~~~~~~~~~i~i~S~SK~~gl  287 (334)
                      ++++++++| |||||.+++.+++++|++.    +++||+||+|.+|.+++ .    .. ......+++++++||||+|+|
T Consensus       174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l  253 (405)
T 3k7y_A          174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL  253 (405)
T ss_dssp             SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred             CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence            678888865 8999999999999999875    99999999999998642 1    11 223446899999999999999


Q ss_pred             cccchheeEc---CHHHHHHHH----Hh-cCC-CCCcHHHHHHHHHHhcCc
Q 019868          288 AGLRVGYGAF---PLSIIEYLW----RA-KQP-YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       288 ~G~R~G~l~~---~~~~i~~l~----~~-~~~-~~~~~~~q~aa~~~L~~~  329 (334)
                      +|||+||+++   ++++++.+.    +. +.. .+++.++|.++..+|+++
T Consensus       254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~  304 (405)
T 3k7y_A          254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQ  304 (405)
T ss_dssp             TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCH
T ss_pred             ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence            9999999864   666665443    22 233 456789999999999885

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=4e-36  Score=284.04  Aligned_cols=237  Identities=27%  Similarity=0.490  Sum_probs=208.0

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-Cc----CCCCCCCcChHHHHHHHHHh------cCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKD------SGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~----~~~~Yp~~g~~~lr~~lA~~------~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .|||+.|++++++++++.+++.+ +.    ....|+.....++|++++++      +++++++|++|+|+++++..++++
T Consensus        32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~  111 (369)
T 3cq5_A           32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA  111 (369)
T ss_dssp             SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHH
T ss_pred             ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHH
Confidence            39999999999999999988765 22    14678765447999999999      567789999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                      ++++||+|++++|+|..+...++..|++++.++.++++.+|++++++++++.++++|++++||||||.+++.+++.++++
T Consensus       112 l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~  191 (369)
T 3cq5_A          112 FGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN  191 (369)
T ss_dssp             HCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999977778999999999987337899999999999999999999999999


Q ss_pred             C-CCeEEEccCCcCccCCCCchhhhcCCC-cEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 019868          246 M-PILVVLDEAYTEFSGLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (334)
Q Consensus       246 ~-~~~lIvDeay~~~~~~~~~~~~~~~~~-~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~  323 (334)
                      . ++++|+||+|.++....+.....+..+ ++++++||||.||++|+|+||+++++++++.+......++++.++|.++.
T Consensus       192 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~  271 (369)
T 3cq5_A          192 VAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI  271 (369)
T ss_dssp             HCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHH
T ss_pred             hCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence            7 899999999999875433344444556 89999999999999999999999999999999888888999999999999


Q ss_pred             HHhcCchhhc
Q 019868          324 AALQNPIYLE  333 (334)
Q Consensus       324 ~~L~~~~~~~  333 (334)
                      ++|++.++++
T Consensus       272 ~~l~~~~~~~  281 (369)
T 3cq5_A          272 VALRHSADTL  281 (369)
T ss_dssp             HHHHTHHHHH
T ss_pred             HHhcCHHHHH
Confidence            9998866543

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=1.7e-36  Score=288.31  Aligned_cols=257  Identities=21%  Similarity=0.289  Sum_probs=209.5

Q ss_pred             hhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhcC----
Q 019868           71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG----  143 (334)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~~----  143 (334)
                      +..+.++ +...+...+.++..+++++|+|+.|++++++++++.+++.+ +. ....|++ .|..++|++++++++    
T Consensus         8 ~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g   86 (391)
T 3h14_A            8 RSAVDPF-IVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYG   86 (391)
T ss_dssp             TTCCCCC-TTHHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHC
T ss_pred             HhhcCcc-hHHHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhC
Confidence            3444444 23444445666666778899999999999999999999876 33 2367854 478999999999974    


Q ss_pred             --CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCc
Q 019868          144 --LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKP  219 (334)
Q Consensus       144 --~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~  219 (334)
                        +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.+.  +|.+|++++++.    ++
T Consensus        87 ~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----~~  162 (391)
T 3h14_A           87 VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----DL  162 (391)
T ss_dssp             CCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS----CC
T ss_pred             CCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc----CC
Confidence              6889999999999999999999999999999999999999999999999999999643  467899999876    68


Q ss_pred             eEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhee
Q 019868          220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      ++|++++||||||.+++.+++++|++.    ++++|+||+|.++.+.+.........+++++++|+||.||++|+|+||+
T Consensus       163 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  242 (391)
T 3h14_A          163 AGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWM  242 (391)
T ss_dssp             SEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEE
T ss_pred             eEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEE
Confidence            999999999999999998888887764    9999999999998865433333334678999999999999999999999


Q ss_pred             EcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          296 AFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       296 ~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      ++++++++.+.+....  ++++.++|.++.++|++.+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  281 (391)
T 3h14_A          243 VVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAEL  281 (391)
T ss_dssp             ECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHH
T ss_pred             EeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHH
Confidence            9999999988776553  678999999999999865554

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=2.7e-36  Score=281.56  Aligned_cols=226  Identities=32%  Similarity=0.497  Sum_probs=200.0

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCCcChHHHHHHHHHhcC---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVLD  168 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~~g~~~lr~~lA~~~~---~~~~~I~~t~G~~~~i~~~~~~l~~  168 (334)
                      .++|+|+.|++++++++.+.+++.+ +  ....+|++.+..++|+++|++++   +++++|++|+|+++++..+++.+  
T Consensus        19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--   96 (335)
T 1uu1_A           19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--   96 (335)
T ss_dssp             CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred             CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence            4689999999999999999999876 3  22367887778999999999999   88899999999999999999987  


Q ss_pred             CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C
Q 019868          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (334)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~  247 (334)
                       ||+|+++ |+|..+...++..|++++.++.++++.+|++++      +++++|++++||||||.+++.+++++|++. +
T Consensus        97 -gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~  168 (335)
T 1uu1_A           97 -DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------GEGDVVFIPNPNNPTGHVFEREEIERILKTGA  168 (335)
T ss_dssp             -SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC
T ss_pred             -CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence             8999999 999999999999999999999766778887766      368999999999999999999999999998 8


Q ss_pred             CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~  327 (334)
                       ++|+||+|.+|... +....++..+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|+
T Consensus       169 -~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  246 (335)
T 1uu1_A          169 -FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALD  246 (335)
T ss_dssp             -EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHH
T ss_pred             -EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhC
Confidence             99999999987653 3344445678899999999999999999999999999999999888889999999999999998


Q ss_pred             Cchhh
Q 019868          328 NPIYL  332 (334)
Q Consensus       328 ~~~~~  332 (334)
                      +.+++
T Consensus       247 ~~~~~  251 (335)
T 1uu1_A          247 HREIF  251 (335)
T ss_dssp             THHHH
T ss_pred             CHHHH
Confidence            86554

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=8.8e-37  Score=288.43  Aligned_cols=239  Identities=22%  Similarity=0.277  Sum_probs=203.5

Q ss_pred             CCCCCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCC-cChHHHHHHHHHhc----CC--CCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~-~g~~~lr~~lA~~~----~~--~~~~I~~t~G~~~~i~~~  162 (334)
                      ...+ ++|||+.|++++++++.+.+++.+. .....|++ .|..++|+++|+++    |+  ++++|++|+|+++++..+
T Consensus        20 ~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~   98 (376)
T 3ezs_A           20 TPKK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNF   98 (376)
T ss_dssp             CCSS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHH
T ss_pred             hccC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHH
Confidence            3345 8999999999999999999999873 34467865 47899999999987    76  789999999999999999


Q ss_pred             HHHhcCC--CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          163 MRCVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       163 ~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                      ++.++++  ||+|+++.|+|..+...++..|++++.++.+++.++++ ++++.+. +++++|++++||||||.+++.+++
T Consensus        99 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~v~~~~p~nptG~~~~~~~l  176 (376)
T 3ezs_A           99 PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-QEVDLVILNSPNNPTGRTLSLEEL  176 (376)
T ss_dssp             HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-HHCSEEEECSSCTTTCCCCCHHHH
T ss_pred             HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-cCCCEEEEcCCCCCcCCCCCHHHH
Confidence            9999999  99999999999999999999999999999654434554 5556665 478999999999999999999999


Q ss_pred             HHHHhC----CCeEEEccCCcCccCCCCchhh---hc-----CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868          241 LKILEM----PILVVLDEAYTEFSGLESRMEW---VK-----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       241 ~~l~~~----~~~lIvDeay~~~~~~~~~~~~---~~-----~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      ++|++.    ++++|+||+|.++.+.+.....   .+     ..+++++++||||.||++|+|+||+++++++++.+.+.
T Consensus       177 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~  256 (376)
T 3ezs_A          177 ISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAF  256 (376)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHH
Confidence            998764    9999999999998865432222   21     57899999999999999999999999999999999887


Q ss_pred             cCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          309 KQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       309 ~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      ...  ++++.++|.++.++|++.+++
T Consensus       257 ~~~~~~~~~~~~~~a~~~~l~~~~~~  282 (376)
T 3ezs_A          257 RAYLGYTSANAIQKASEAAWLDDRHA  282 (376)
T ss_dssp             HTTTCCCCCHHHHHHHHHHHHCSHHH
T ss_pred             HhhhcCCCChHHHHHHHHHHhCcHHH
Confidence            664  788999999999999986654

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=6.7e-36  Score=280.65  Aligned_cols=235  Identities=29%  Similarity=0.520  Sum_probs=206.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      +++++|||+.|++++++++.+.+++.+ +.....||+.+..++|+++++++++++++|++|+|+++++..+++.+    |
T Consensus        24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d   99 (361)
T 3ftb_A           24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----E   99 (361)
T ss_dssp             ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----S
T ss_pred             CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----C
Confidence            457799999999999999999988875 33446788888999999999999999999999999999999999976    9


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~  247 (334)
                      +|+++.|+|..+...++..|++++.++.+.+..+++++++++++ + +++|++++||||||.+++.+++++|++.    +
T Consensus       100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  177 (361)
T 3ftb_A          100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK  177 (361)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred             cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence            99999999999999999999999999977666789999999997 4 9999999999999999999999988874    9


Q ss_pred             CeEEEccCCcCccCC--CCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 019868          248 ILVVLDEAYTEFSGL--ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPYNVSVAAEVAACA  324 (334)
Q Consensus       248 ~~lIvDeay~~~~~~--~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~~~~~~~~~~~~~q~aa~~  324 (334)
                      +++|+||+|.++..+  ..........+++++++|+||.+|++|+|+||++ .++++++.+.+....++++.++|.++.+
T Consensus       178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (361)
T 3ftb_A          178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN  257 (361)
T ss_dssp             CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred             CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence            999999999998864  2333444567889999999999999999999998 8999999999988889999999999999


Q ss_pred             HhcCchhhc
Q 019868          325 ALQNPIYLE  333 (334)
Q Consensus       325 ~L~~~~~~~  333 (334)
                      +|++.++++
T Consensus       258 ~l~~~~~~~  266 (361)
T 3ftb_A          258 CLKDTNYIE  266 (361)
T ss_dssp             TSSCHHHHH
T ss_pred             HhcCHHHHH
Confidence            999866543

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.8e-35  Score=277.16  Aligned_cols=228  Identities=26%  Similarity=0.404  Sum_probs=199.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~  172 (334)
                      ++++|||+.|++++++++++.+++.+ +.....||++...+||+++|+++++++++|++|+|+++++..+++.+.  ||+
T Consensus        14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~   91 (350)
T 3fkd_A           14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSR   91 (350)
T ss_dssp             --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCE
T ss_pred             cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCE
Confidence            46789999999999999999999876 444467877655899999999999999999999999999999999887  999


Q ss_pred             EEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCe
Q 019868          173 IVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PIL  249 (334)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~  249 (334)
                      |+++.|+|..+...++..|++++.++. +++..+++         +++++|++++||||||.+++.+++.+|++.  ..+
T Consensus        92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~  162 (350)
T 3fkd_A           92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF---------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT  162 (350)
T ss_dssp             EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC---------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred             EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc---------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence            999999999999999999999999997 54334443         478999999999999999999999999986  479


Q ss_pred             EEEccCCcCccCCCC-chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868          250 VVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       250 lIvDeay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||+|.++...+. .....+..+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++
T Consensus       163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  242 (350)
T 3fkd_A          163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIH  242 (350)
T ss_dssp             EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHC
T ss_pred             EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence            999999999886443 2344456789999999999999999999999999999999999988899999999999999988


Q ss_pred             ch-hh
Q 019868          329 PI-YL  332 (334)
Q Consensus       329 ~~-~~  332 (334)
                      .+ |.
T Consensus       243 ~~~~~  247 (350)
T 3fkd_A          243 PAQFT  247 (350)
T ss_dssp             TTTTC
T ss_pred             HHHHH
Confidence            65 44

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=2.8e-35  Score=279.48  Aligned_cols=258  Identities=24%  Similarity=0.369  Sum_probs=211.5

Q ss_pred             HHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc---
Q 019868           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS---  142 (334)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~---  142 (334)
                      +++..+.++. +..+...+.+...++.++|+|+.|++++++++.+.+++.+ +. ....|+. .|..++|+++++++   
T Consensus         5 ~~~~~~~~~~-~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~   83 (388)
T 1j32_A            5 ARVESVSPSM-TLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRD   83 (388)
T ss_dssp             HHHHTSCCCS-STTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             hHhHhCCccH-HHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence            4455555553 4444445555545567899999999999989999988775 32 2356855 47899999999987   


Q ss_pred             -C--CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccC
Q 019868          143 -G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE  217 (334)
Q Consensus       143 -~--~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~  217 (334)
                       |  +++++|++|+|+++++..++++++++||+|++++|+|..+...++..|++++.++.+.  ++.+|+++++++++ +
T Consensus        84 ~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~  162 (388)
T 1j32_A           84 NGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-P  162 (388)
T ss_dssp             HCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-T
T ss_pred             cCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-c
Confidence             4  4678999999999999999999999999999999999999999999999999999653  67899999999997 5


Q ss_pred             CceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhc--CCCcEEEEcCCchhhccc
Q 019868          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVK--KHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~--~~~~~i~i~S~SK~~gl~  288 (334)
                      ++++|++++|+||||.+++.+++++|++.    ++++|+||+|.++.+.+..   ...+.  ..+++++++|+||.||++
T Consensus       163 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~  242 (388)
T 1j32_A          163 KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT  242 (388)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCT
T ss_pred             CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCc
Confidence            79999999999999999998777777664    9999999999998764321   12121  146789999999999999


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      |+|+||+++++++++.+.....  .++++.++|.++.++|+.
T Consensus       243 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  284 (388)
T 1j32_A          243 GWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN  284 (388)
T ss_dssp             TTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS
T ss_pred             ccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence            9999999999999998877654  377899999999999974

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.4e-36  Score=285.87  Aligned_cols=259  Identities=25%  Similarity=0.347  Sum_probs=203.1

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC--CCCC-CCcChHHHHHHHHHhc-
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS-  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Y-p~~g~~~lr~~lA~~~-  142 (334)
                      ++++..+.++. ...+...+.+++.++.++|+|+.|++++++++.+.+++.+ +..  ...| +..+..++|+++|+++ 
T Consensus        11 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~   89 (412)
T 2x5d_A           11 FARIDRLPPYV-FNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYR   89 (412)
T ss_dssp             ----------C-HHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHH
T ss_pred             hHHHhhcCchH-HHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHH
Confidence            44555555552 2233334444455677899999999999999999999876 322  3568 4668999999999998 


Q ss_pred             ---CC--CC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhc
Q 019868          143 ---GL--ES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAV  214 (334)
Q Consensus       143 ---~~--~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l  214 (334)
                         |+  ++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.++  ++.+|++++++++
T Consensus        90 ~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i  169 (412)
T 2x5d_A           90 DRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRES  169 (412)
T ss_dssp             HHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTE
T ss_pred             HHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhc
Confidence               74  66 6999999999999999999999999999999999999999999999999999654  3457899999999


Q ss_pred             ccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhc
Q 019868          215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAG  286 (334)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g  286 (334)
                      + +++++|++++||||||.+++.+++++|++.    ++++|+||+|.++.+.+.   ....+. ..+++++++|+||.||
T Consensus       170 ~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (412)
T 2x5d_A          170 I-PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN  248 (412)
T ss_dssp             E-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS
T ss_pred             c-cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC
Confidence            7 689999999999999999998888877764    999999999999885321   122222 2578999999999999


Q ss_pred             ccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          287 LAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       287 l~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ++|+|+||+++++++++.+.+...  .++.+.++|.++.++|++
T Consensus       249 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  292 (412)
T 2x5d_A          249 MAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG  292 (412)
T ss_dssp             CTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred             CcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence            999999999999999998877655  378999999999999986

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-35  Score=281.44  Aligned_cols=239  Identities=18%  Similarity=0.245  Sum_probs=203.4

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcC--CCCCCC-cChHHHHHHHHHhc----CCC--CC-CEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS----GLE--SD-HILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Yp~-~g~~~lr~~lA~~~----~~~--~~-~I~~t~G~~~~i~~  161 (334)
                      ++.++|+|+.|++++++++.+.+++.+ +..  ...|++ .+..++|+++|+++    |++  ++ +|++|+|+++++..
T Consensus        23 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~  102 (376)
T 2dou_A           23 RGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAH  102 (376)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHH
T ss_pred             cCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence            456789999999999989999999876 322  367876 47899999999998    764  45 99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++++++||+|+++.|+|..+...++..|++++.++.++++.+|+++++++++ +++++|++++||||||.+++.++++
T Consensus       103 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~  181 (376)
T 2dou_A          103 LLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVADWGYFE  181 (376)
T ss_dssp             HHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHHH
T ss_pred             HHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCCHHHHH
Confidence            999999999999999999999999999999999999975567789999998886 5789999999999999999988888


Q ss_pred             HHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--C
Q 019868          242 KILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~  312 (334)
                      +|++.    ++++|+||+|.++.+.+.   .....+..+++++++||||.||++|+|+||+++++++++.+.+....  +
T Consensus       182 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  261 (376)
T 2dou_A          182 EALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDF  261 (376)
T ss_dssp             HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhccc
Confidence            77654    899999999999876432   22222335789999999999999999999999999999988776553  5


Q ss_pred             CCcHHHHHHHHHHhcC-chhh
Q 019868          313 NVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       313 ~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +.+.++|.++.++|++ .+++
T Consensus       262 ~~~~~~~~a~~~~l~~~~~~~  282 (376)
T 2dou_A          262 NQYAGVLRMGVEALKTPKEVV  282 (376)
T ss_dssp             CSCHHHHHHHHHHHTSCHHHH
T ss_pred             CCCHHHHHHHHHHHhCcHHHH
Confidence            7899999999999987 4443

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=5.1e-35  Score=278.50  Aligned_cols=261  Identities=23%  Similarity=0.356  Sum_probs=212.0

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc-
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS-  142 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~-  142 (334)
                      +++++..+.++. +..+...+.+....++++|+|+.|++++++++.+.+++.+ +. ....|+. .+..++|+++|+++ 
T Consensus        14 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~   92 (389)
T 1o4s_A           14 VSRRISEIPISK-TMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIG   92 (389)
T ss_dssp             CCHHHHHSCCCS-SHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHhhcCccH-HHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            344555555552 3333333333333456789999999998888999988875 32 2356864 47899999999998 


Q ss_pred             ---CC--CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcc
Q 019868          143 ---GL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVE  215 (334)
Q Consensus       143 ---~~--~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~  215 (334)
                         |+  ++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+  +++.+|+++++++++
T Consensus        93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  172 (389)
T 1o4s_A           93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV  172 (389)
T ss_dssp             HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred             HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence               65  67899999999999999999999999999999999999999999999999999965  357899999999997


Q ss_pred             cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhhhcC-CCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKK-HDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~~~~-~~~~i~i~S~SK~~gl~  288 (334)
                       +++++|++++|+||||.+++.+++++|++.    ++++|+||+|.++.+.+.  ....+.. .+++++++||||.||++
T Consensus       173 -~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~  251 (389)
T 1o4s_A          173 -GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMT  251 (389)
T ss_dssp             -TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCG
T ss_pred             -cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCc
Confidence             578999999999999999997777777654    999999999999876432  2222222 57899999999999999


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcCc
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~~  329 (334)
                      |+|+||+++++++++.+.+...  .++++.++|.++.++|++.
T Consensus       252 G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~  294 (389)
T 1o4s_A          252 GWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD  294 (389)
T ss_dssp             GGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC
T ss_pred             ccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc
Confidence            9999999999999998877654  3788999999999999863

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-35  Score=285.86  Aligned_cols=235  Identities=20%  Similarity=0.358  Sum_probs=201.2

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-CcC--CCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+.++|+|+.|.+++++++.+.+++.+ +..  ...|+. .|..+||+++++++    |  +++++|++|+|+++++..+
T Consensus        55 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~  134 (447)
T 3b46_A           55 QGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSC  134 (447)
T ss_dssp             TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHH
T ss_pred             cCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence            345789999999999999999998876 332  357854 48899999999987    3  5678999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC------------CCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~------------~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +++++++||+|++++|+|..|...++..|++++.++.+.            +|.+|+++++++++ +++++|++++||||
T Consensus       135 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~np  213 (447)
T 3b46_A          135 LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNP  213 (447)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred             HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCC
Confidence            999999999999999999999999999999999998532            57899999999997 68999999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhhh--cCCCcEEEEcCCchhhcccccchheeEc-CHHH
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSI  301 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~  301 (334)
                      ||.+++.+++++|++.    ++++|+||+|.++.+++.  ....+  +..+++++++|+||.||++|+|+||+++ ++++
T Consensus       214 tG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l  293 (447)
T 3b46_A          214 IGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL  293 (447)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH
T ss_pred             CCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH
Confidence            9999998888888764    899999999999876432  12222  2357899999999999999999999999 9999


Q ss_pred             HHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          302 IEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       302 i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ++.+.+...  .++.+++.|.++.++|++
T Consensus       294 ~~~l~~~~~~~~~~~~~~~~~a~~~aL~~  322 (447)
T 3b46_A          294 LSYAAKAHTRICFASPSPLQEACANSIND  322 (447)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence            998876543  478899999999999976

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=6.6e-35  Score=275.41  Aligned_cols=250  Identities=21%  Similarity=0.328  Sum_probs=206.8

Q ss_pred             HhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhcC---
Q 019868           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG---  143 (334)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~~---  143 (334)
                      ++..+.++ ++..+...+.+....+.++|+|+.|++++++++.+.+++.+ +. ....|+. .+..++|++++++++   
T Consensus         5 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~   83 (370)
T 2z61_A            5 RLLNFESF-EVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKY   83 (370)
T ss_dssp             HHHHCCCC-TTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHS
T ss_pred             hhhhcccc-HHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            34444444 33344444444333456789999999999888999988865 32 2356865 478999999999984   


Q ss_pred             ---CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          144 ---LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       144 ---~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                         +++++|++|+|+++++..++++++++||+|++++|+|..+...++..|++++.++      +|+++++++++ ++++
T Consensus        84 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~-~~~~  156 (370)
T 2z61_A           84 KADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS-DKTK  156 (370)
T ss_dssp             SCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC-SSEE
T ss_pred             CCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc-cCce
Confidence               6788999999999999999999999999999999999999999999999999987      68999999997 5789


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhh-cCCCcEEEEcCCchhhcccccchheeE
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      +|++++||||||.+++.+ +.++++. ++++|+||+|.++.+.+...  ..+ +..+++++++||||.||++|+|+||++
T Consensus       157 ~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  235 (370)
T 2z61_A          157 AIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVI  235 (370)
T ss_dssp             EEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEE
T ss_pred             EEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEE
Confidence            999999999999999999 9999987 99999999999987643221  222 245789999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++.+......  ++++.++|.++.++|++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  269 (370)
T 2z61_A          236 SNDEIIEAILKLQQNLFISAPTISQYAALKAFEK  269 (370)
T ss_dssp             CCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSH
T ss_pred             ECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhc
Confidence            999999988776543  58899999999999975

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=2.3e-35  Score=282.55  Aligned_cols=261  Identities=20%  Similarity=0.249  Sum_probs=207.8

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC--CCCCCC-cChHHHHHHHHHhc-
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS-  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Yp~-~g~~~lr~~lA~~~-  142 (334)
                      ++++..+.++. ...+.....+  .++.++|+|+.|++++++++.+.+++.+ +..  ...|++ .+..++|+++|+++ 
T Consensus        23 ~~~~~~~~~~~-~~~~~~~~~~--~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~   99 (404)
T 2o1b_A           23 SNKLANIPDSY-FGKTMGRKIE--HGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQ   99 (404)
T ss_dssp             CHHHHTSCCCT-TC-------C--CCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhHhhhCCchH-HHHHHHHHHh--cCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            44555566653 2222222211  3456789999999999989999999876 322  246865 58899999999998 


Q ss_pred             ---CCC--C-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcc
Q 019868          143 ---GLE--S-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVE  215 (334)
Q Consensus       143 ---~~~--~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~  215 (334)
                         |++  + ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.+. ++.+|+++++++++
T Consensus       100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~  179 (404)
T 2o1b_A          100 RQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII  179 (404)
T ss_dssp             HHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH
T ss_pred             HHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc
Confidence               864  4 7999999999999999999999999999999999999999999999999999653 56789999998886


Q ss_pred             cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh---cCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV---KKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~---~~~~~~i~i~S~SK~~gl~  288 (334)
                       +++++|++++|+||||.+++.+++++|++.    ++++|+||+|.++.+.+......   ...+++++++||||.||++
T Consensus       180 -~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~  258 (404)
T 2o1b_A          180 -DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMS  258 (404)
T ss_dssp             -HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCG
T ss_pred             -cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCc
Confidence             578999999999999999998877777653    89999999999987643221111   1236789999999999999


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC-chhh
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      |+|+||+++++++++.+.+...  .++++.++|.++.++|++ .+++
T Consensus       259 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~  305 (404)
T 2o1b_A          259 GFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFL  305 (404)
T ss_dssp             GGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHH
T ss_pred             hhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHH
Confidence            9999999999999998877654  368999999999999986 4443

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=3.8e-35  Score=280.32  Aligned_cols=233  Identities=23%  Similarity=0.336  Sum_probs=201.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhcC------CCC-CCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDSG------LES-DHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~~------~~~-~~I~~t~G~~~~i~~~~  163 (334)
                      .++|+|+.|++++++++.+.+++.+ +.  ...+|+. .|..++|++++++++      +++ ++|++|+|+++++..++
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~  102 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI  102 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence            5689999999999999999999876 32  2357865 478999999999985      677 89999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-----------CCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----------SDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-----------~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      +.++++||+|+++.|+|..|...++..|++++.++.+           .++.+|+++++++++ +++++|++++||||||
T Consensus       103 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~nptG  181 (410)
T 3e2y_A          103 QGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-SKTKAIILNTPHNPLG  181 (410)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-TTEEEEEEESSCTTTC
T ss_pred             HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-CCceEEEEeCCCCCCC
Confidence            9999999999999999999999999999999999853           356789999999997 6899999999999999


Q ss_pred             cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       233 ~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      .+++.+++++|++.    ++++|+||+|.+|.+.+.    ........+++++++||||.||++|+|+||+++++++++.
T Consensus       182 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~  261 (410)
T 3e2y_A          182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKH  261 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHH
Confidence            99998888888764    999999999999886432    1222234578999999999999999999999999999998


Q ss_pred             HHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          305 LWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       305 l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +.+...  .+++++++|.++.++|++
T Consensus       262 ~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (410)
T 3e2y_A          262 LQTVQQNSFYTCATPLQAALAEAFWI  287 (410)
T ss_dssp             HHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhccCCChHHHHHHHHHHHh
Confidence            887654  578999999999999873

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.8e-34  Score=273.99  Aligned_cols=233  Identities=25%  Similarity=0.416  Sum_probs=199.8

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~-I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+ +. ....|+. .|..++|+++++++    |  +++++ |++|+|+++++..+++
T Consensus        26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  105 (389)
T 1gd9_A           26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS  105 (389)
T ss_dssp             SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred             cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHH
Confidence            4689999999999889999988875 32 2356865 47899999999998    7  56789 9999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      +++++||+|++++|+|..+...++..|++++.++.+.  ++.+|+++++++++ +++++|++++||||||.+++.+++++
T Consensus       106 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~  184 (389)
T 1gd9_A          106 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE  184 (389)
T ss_dssp             TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHH
Confidence            9999999999999999999999999999999999653  57899999999997 57899999999999999999877777


Q ss_pred             HHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--C
Q 019868          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~  312 (334)
                      |++.    ++++|+||+|.++.+.+.   ....+. ..+++++++||||.||++|+|+||+++++++++.+......  +
T Consensus       185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (389)
T 1gd9_A          185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT  264 (389)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhcc
Confidence            7664    999999999999886432   122222 25689999999999999999999999999999998876654  6


Q ss_pred             CCcHHHHHHHHHHhcC
Q 019868          313 NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ~~~~~~q~aa~~~L~~  328 (334)
                      +.+.++|.++.++|++
T Consensus       265 ~~~~~~~~a~~~~l~~  280 (389)
T 1gd9_A          265 CPVTFIQYAAAKALKD  280 (389)
T ss_dssp             SCCHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHhC
Confidence            8899999999999987

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=4e-35  Score=281.41  Aligned_cols=233  Identities=21%  Similarity=0.315  Sum_probs=200.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC---CCCCCC-cChHHHHHHHHHhcC------CCC-CCEEEeCCHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPD-PESRRLRAALAKDSG------LES-DHILVGCGADELIDLI  162 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~Yp~-~g~~~lr~~lA~~~~------~~~-~~I~~t~G~~~~i~~~  162 (334)
                      .++|+|+.|++++++++.+.+++.+ +..   ...|+. .|..++|++++++++      +++ ++|++|+|+++++..+
T Consensus        28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~  107 (422)
T 3fvs_A           28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA  107 (422)
T ss_dssp             SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred             CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence            4689999999999999999999876 322   257865 478999999999885      667 6999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC------------CCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~------------~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +..++++||+|+++.|+|..|...++..|++++.++.+.            +|.+|+++++++++ +++++|++++||||
T Consensus       108 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~np  186 (422)
T 3fvs_A          108 FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNNP  186 (422)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred             HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-CCceEEEECCCCCC
Confidence            999999999999999999999999999999999998543            45789999999997 68999999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---ch-hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      ||.+++.+++++|++.    ++++|+||+|.++.+.+.   .. ......+++++++||||.||++|+|+||++++++++
T Consensus       187 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~  266 (422)
T 3fvs_A          187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM  266 (422)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHH
Confidence            9999988888877764    999999999999886442   12 222235789999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          303 EYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       303 ~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +.+.+...  .++.++++|.++.++|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~  294 (422)
T 3fvs_A          267 KHLRTVHQNSVFHCPTQSQAAVAESFER  294 (422)
T ss_dssp             HHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCCCCcHHHHHHHHHHhh
Confidence            98877654  578999999999999974

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=7e-35  Score=281.30  Aligned_cols=235  Identities=20%  Similarity=0.313  Sum_probs=199.7

Q ss_pred             CCCCeeecCCCCCC----CCCCHHHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhcC-----CCCCCEEEeCCHHHHH
Q 019868           93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (334)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~~-----~~~~~I~~t~G~~~~i  159 (334)
                      +++++|+|+.|.+.    +++++.+++++.+. .  ....| +..|..++|+++|++++     +++++|++|+|+++++
T Consensus        52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al  131 (427)
T 3dyd_A           52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI  131 (427)
T ss_dssp             TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred             CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence            45678999999864    67889999988762 2  23578 56789999999999998     7889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ..++..++++||+|+++.|+|..|...++..|++++.++..  .++.+|++++++.++ +++++|++++||||||.+++.
T Consensus       132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~  210 (427)
T 3dyd_A          132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSK  210 (427)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc-cCCCEEEEECCCCCCCCCCCH
Confidence            99999999999999999999999999999999999998843  567899999999997 578999999999999999997


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-------HHHHH
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIE  303 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-------~~~i~  303 (334)
                      +++++|++.    ++++|+||+|.+|.+++.   ....+....++++++||||.|+++|+|+||++++       +++++
T Consensus       211 ~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~  290 (427)
T 3dyd_A          211 RHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD  290 (427)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHH
Confidence            777777664    999999999999886442   2233344567899999999999999999999986       57887


Q ss_pred             HHHHhcC-CCCCcHHHHHHHHHHhcC
Q 019868          304 YLWRAKQ-PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       304 ~l~~~~~-~~~~~~~~q~aa~~~L~~  328 (334)
                      .+.+... .++++.++|.++.++|++
T Consensus       291 ~l~~~~~~~~~~~~~~~~a~~~~L~~  316 (427)
T 3dyd_A          291 GLVKLSQRILGPCTIVQGALKSILCR  316 (427)
T ss_dssp             HHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHh
Confidence            7766543 478999999999999983

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=2.7e-35  Score=278.14  Aligned_cols=235  Identities=16%  Similarity=0.135  Sum_probs=202.9

Q ss_pred             hCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC-CCCCCCcChHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHH
Q 019868           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSG------LESDHILVGCGADELIDL  161 (334)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Yp~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~  161 (334)
                      +...++++|||+.|++++++++.+.+++.+ +.. ...|++.+ .++|++++++++      +++++|++|+|+++++..
T Consensus        18 ~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~   96 (377)
T 3fdb_A           18 WTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYI   96 (377)
T ss_dssp             HHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred             eeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHH
Confidence            445678899999999999999999999876 332 46786555 899999999987      788999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      +++.++++||+|+++.|+|..+...++..|++++.++.+.+  +|+++++++++ ++++++++++||||||.+++.++++
T Consensus        97 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l~  173 (377)
T 3fdb_A           97 AIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWLN  173 (377)
T ss_dssp             HHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred             HHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999997655  99999999997 5789999999999999999999998


Q ss_pred             HHHhC----CCeEEEccCCcCccCCC--Cchh--hhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhcCC-
Q 019868          242 KILEM----PILVVLDEAYTEFSGLE--SRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP-  311 (334)
Q Consensus       242 ~l~~~----~~~lIvDeay~~~~~~~--~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~-  311 (334)
                      +|++.    ++++|+||+|.++.+.+  ....  .+...+++++++||||.||++|+|+||+++ ++++++.+.+.... 
T Consensus       174 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~  253 (377)
T 3fdb_A          174 ELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVI  253 (377)
T ss_dssp             HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHH
T ss_pred             HHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhh
Confidence            88663    99999999999988654  2222  222367889999999999999999999887 78899988776543 


Q ss_pred             -CCCcHHHHHHHHHHhcC
Q 019868          312 -YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 -~~~~~~~q~aa~~~L~~  328 (334)
                       +++++++|.++.++|++
T Consensus       254 ~~~~~~~~~~a~~~~l~~  271 (377)
T 3fdb_A          254 KDGASTLGLIAAEAAYRY  271 (377)
T ss_dssp             HCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhc
Confidence             68999999999999886

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.8e-34  Score=274.78  Aligned_cols=234  Identities=21%  Similarity=0.340  Sum_probs=196.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC-----CCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-----PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~  161 (334)
                      .++|+|+.|.+++++++.+.+++.+ +..     ...| +..|..++|+++++++      ++++++|++|+|+++++..
T Consensus        35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~  114 (398)
T 3ele_A           35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI  114 (398)
T ss_dssp             GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred             CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence            5689999999888999999998876 322     3568 5568899999999987      3688999999999999999


Q ss_pred             HHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      +++.++++| |+|+++.|+|..|...++..|++++.+|.+ +++.+|+++++++++ +++++|++++||||||.+++.++
T Consensus       115 ~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~  193 (398)
T 3ele_A          115 CFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEET  193 (398)
T ss_dssp             HHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC-TTEEEEEECSSCTTTCCCCCHHH
T ss_pred             HHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC-cCCCEEEEcCCCCCCCCCCCHHH
Confidence            999999999 999999999999999999999999999965 468999999999997 68999999999999999999888


Q ss_pred             HHHHHh----------CCCeEEEccCCcCccCCCC-chhhhcCCCcEEEEcCCchhhcccccchheeEcCHH------HH
Q 019868          240 LLKILE----------MPILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS------II  302 (334)
Q Consensus       240 l~~l~~----------~~~~lIvDeay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~------~i  302 (334)
                      +++|++          .++++|+||+|.+|.+++. ........+++++++||||.||++|+|+||++++++      +.
T Consensus       194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  273 (398)
T 3ele_A          194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY  273 (398)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred             HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence            886654          4799999999999887542 222334568899999999999999999999999876      33


Q ss_pred             HHHHH---hcCCCCCcHHHHHHHHHHhcCc
Q 019868          303 EYLWR---AKQPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       303 ~~l~~---~~~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +.+..   ....++.+.++|.++..++++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  303 (398)
T 3ele_A          274 AAVCGAGRALGYVCAPSLFQKMIVKCQGAT  303 (398)
T ss_dssp             HHHHHHHHHTTCCCSCHHHHHHHTTCTTCC
T ss_pred             HHHHHHhhhccccCCCHHHHHHHHHHhcCH
Confidence            33332   2235678899999998888764

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=1e-34  Score=275.20  Aligned_cols=231  Identities=25%  Similarity=0.417  Sum_probs=200.0

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      ++|+|+.|++++++++.+.+++.+ +.....|+.. +..++|+++++++++++++|++|+|+++++..++..++++||+|
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~V  105 (381)
T 1v2d_A           26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEV  105 (381)
T ss_dssp             TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEE
Confidence            479999999999999999999876 3334678654 78999999999999998999999999999999999999999999


Q ss_pred             EEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----
Q 019868          174 VDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----  246 (334)
Q Consensus       174 l~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----  246 (334)
                      ++++|+|..+...++..|++++.++.+   +++.+|+++++++++ +++++|++++|+||||.+++.+++++|++.    
T Consensus       106 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~  184 (381)
T 1v2d_A          106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGERELEAIARLARAH  184 (381)
T ss_dssp             EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred             EEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence            999999999999999999999999965   567899999999997 679999999999999999998777777654    


Q ss_pred             CCeEEEccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHH
Q 019868          247 PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA  322 (334)
Q Consensus       247 ~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa  322 (334)
                      ++++|+||+|.++.++.  ...... ..++++++.|+||.||++|+|+||+++++++++.+.....  .++.+.+.|.++
T Consensus       185 ~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  263 (381)
T 1v2d_A          185 DLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGV  263 (381)
T ss_dssp             TCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred             CCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHH
Confidence            89999999999987522  112222 5678999999999999999999999999999988876554  578899999999


Q ss_pred             HHHhcC
Q 019868          323 CAALQN  328 (334)
Q Consensus       323 ~~~L~~  328 (334)
                      .++|+.
T Consensus       264 ~~~l~~  269 (381)
T 1v2d_A          264 AEALKL  269 (381)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            998874

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=3.9e-34  Score=271.60  Aligned_cols=237  Identities=21%  Similarity=0.396  Sum_probs=200.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC-CCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|++++++++.+.+++.+ +.. ...|+. .|..++|+++++++    |  ++++ +|++|+|+++++..+++
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  109 (386)
T 1u08_A           30 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  109 (386)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHH
Confidence            3579999999998889999998876 332 367855 47899999999985    5  5688 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++++||+|++++|+|..+...++..|++++.++.+. ++.+|+++++++++ +++++|++++||||||.+++.+++++|
T Consensus       110 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i  188 (386)
T 1u08_A          110 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  188 (386)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence            9999999999999999999999999999999999654 57899999999996 689999999999999999998777776


Q ss_pred             HhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~  313 (334)
                      ++.    ++++|+||+|.++.+.+.   ....+. ..+++++++|+||.||++|+|+||+++++++++.+.+...  .++
T Consensus       189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~  268 (386)
T 1u08_A          189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  268 (386)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence            653    899999999999876432   121221 3578999999999999999999999999999998877654  478


Q ss_pred             CcHHHHHHHHHHhcC-chhh
Q 019868          314 VSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~-~~~~  332 (334)
                      .+.++|.++.++|++ .+++
T Consensus       269 ~~~~~~~a~~~~l~~~~~~~  288 (386)
T 1u08_A          269 VNTPAQLALADMLRAEPEHY  288 (386)
T ss_dssp             CCHHHHHHHHHHHHHCTHHH
T ss_pred             CChHHHHHHHHHHhCCcHHH
Confidence            899999999999986 3443

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=8.7e-35  Score=278.28  Aligned_cols=256  Identities=24%  Similarity=0.335  Sum_probs=206.7

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcC-CCCCCC-cChHHHHHHHHHh
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKD  141 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~lA~~  141 (334)
                      ++++..+.++ ++..+. .+.+++.++.++|+|+.|++   ++++++.+.+++.+ +.. ...|+. .+..++|++++++
T Consensus        13 ~~~~~~~~~~-~~~~~~-~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~   90 (406)
T 1xi9_A           13 SKRALSVEYA-IRDVVL-PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVER   90 (406)
T ss_dssp             CHHHHTCCC---------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHH
T ss_pred             HHHHhcCChh-HHHHHH-HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHH
Confidence            3445555555 233444 45555555678999999999   78888999888765 322 246865 4789999999999


Q ss_pred             c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHh
Q 019868          142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA  213 (334)
Q Consensus       142 ~------~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~  213 (334)
                      +      ++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|++++.++.+  +++.+|+++++++
T Consensus        91 l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~  170 (406)
T 1xi9_A           91 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKK  170 (406)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHH
T ss_pred             HHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHh
Confidence            8      5678899999999999999999999999999999999999999999999999999854  3577899999999


Q ss_pred             cccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhhhcCCCc-EEEEcCCchhhc
Q 019868          214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDN-LIVLRTFSKRAG  286 (334)
Q Consensus       214 l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~~~~~~~-~i~i~S~SK~~g  286 (334)
                      ++ +++++|++++|+||||.+++.+++++|++.    ++++|+||+|.++.+++.  ....++ .++ +++++||||.+|
T Consensus       171 l~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~  248 (406)
T 1xi9_A          171 IT-DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYF  248 (406)
T ss_dssp             CC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTC
T ss_pred             hC-cCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccC
Confidence            97 578999999999999999997777777664    999999999999876322  222233 577 999999999999


Q ss_pred             ccccchheeE--cCH----HHHHHHHHhcCC-CCCcHHHHHHHHHHhc
Q 019868          287 LAGLRVGYGA--FPL----SIIEYLWRAKQP-YNVSVAAEVAACAALQ  327 (334)
Q Consensus       287 l~G~R~G~l~--~~~----~~i~~l~~~~~~-~~~~~~~q~aa~~~L~  327 (334)
                      ++|+|+||++  +++    ++++.+...... ++++.++|.++.++|+
T Consensus       249 ~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~  296 (406)
T 1xi9_A          249 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLT  296 (406)
T ss_dssp             CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHH
T ss_pred             CCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence            9999999999  898    999888765543 7889999999999995

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=1.1e-34  Score=279.43  Aligned_cols=235  Identities=21%  Similarity=0.317  Sum_probs=196.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcCc-------------CCCCCCCc-ChHHHHHHHHHhcC--------CCCCCEEEe
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHILVG  152 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~Yp~~-g~~~lr~~lA~~~~--------~~~~~I~~t  152 (334)
                      ..+|+|+.|++++++ +.+.+++.+..             ....|+++ |..+||+++|++++        +++++|++|
T Consensus        36 ~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~  114 (428)
T 1iay_A           36 NGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA  114 (428)
T ss_dssp             TSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred             CceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence            468999999999976 47777776421             12568765 68999999999986        778999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEE
Q 019868          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFL  224 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l  224 (334)
                      +|+++++..++++++++||+|+++.|+|..|...+. ..|++++.++.+  ++|.+|++++++++++     .++++|++
T Consensus       115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l  194 (428)
T 1iay_A          115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL  194 (428)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence            999999999999999999999999999999877543 689999999864  4578999999998863     36899999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---c-hhhhcC-------CCcEEEEcCCchhhcccc
Q 019868          225 TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R-MEWVKK-------HDNLIVLRTFSKRAGLAG  289 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~-~~~~~~-------~~~~i~i~S~SK~~gl~G  289 (334)
                      ++||||||.+++.+++++|++.    ++++|+||+|.++.+.+.   . ......       .+++++++||||.||++|
T Consensus       195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G  274 (428)
T 1iay_A          195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG  274 (428)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence            9999999999997777666553    899999999999765321   1 222223       588999999999999999


Q ss_pred             cchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868          290 LRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       290 ~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      +|+||+++ ++++++.+.+...+++++.++|.++.++|++.+
T Consensus       275 lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  316 (428)
T 1iay_A          275 FRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEK  316 (428)
T ss_dssp             GCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHH
T ss_pred             ceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChH
Confidence            99999999 688999998887778899999999999999876

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=4.3e-34  Score=272.31  Aligned_cols=245  Identities=16%  Similarity=0.259  Sum_probs=201.3

Q ss_pred             HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCCCcChHHHHHHHHHhc----C--CCCCCEEEeCC
Q 019868           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCG  154 (334)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp~~g~~~lr~~lA~~~----~--~~~~~I~~t~G  154 (334)
                      ++...+++|..+.++|+|+.+++++++++.+.+++.+. . ....|+.. ..++|+++++++    |  +++++|++|+|
T Consensus        19 ~d~~g~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g   97 (399)
T 1c7n_A           19 WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAG   97 (399)
T ss_dssp             HHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred             cccchhhccccCCCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCC
Confidence            34333445543457899999999999999999988763 2 34678665 899999999985    6  67889999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-C--CCCCCHHHHHHhcccCCceEEEEeCCCCcc
Q 019868          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt  231 (334)
                      +++++..++++++++||+|+++.|+|..+...++..|++++.++.+ +  +|.+|++++++++++.++++|++++|||||
T Consensus        98 ~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  177 (399)
T 1c7n_A           98 VVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPV  177 (399)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTT
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCC
Confidence            9999999999999999999999999999999999999999999863 2  345999999999975678999999999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcC--CCcEEEEcCCchhhcccccchheeEcC-HHH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSI  301 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~  301 (334)
                      |.+++.+++++|++.    ++++|+||+|.++.+.+.   ....+..  .+++++++||||.||++|+|+||++++ +++
T Consensus       178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  257 (399)
T 1c7n_A          178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI  257 (399)
T ss_dssp             TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred             CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHH
Confidence            999997777776654    999999999999876432   1222221  478999999999999999999999996 678


Q ss_pred             HHHHHHhcCCC---CCcHHHHHHHHHHhcC
Q 019868          302 IEYLWRAKQPY---NVSVAAEVAACAALQN  328 (334)
Q Consensus       302 i~~l~~~~~~~---~~~~~~q~aa~~~L~~  328 (334)
                      ++.+......+   ++++++|.++.++|++
T Consensus       258 ~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (399)
T 1c7n_A          258 RERFTKSRDATSGMPFTTLGYKACEICYKE  287 (399)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence            88887765543   6799999999998875

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=8.8e-34  Score=273.03  Aligned_cols=233  Identities=22%  Similarity=0.321  Sum_probs=199.2

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC----CCCCCCc-ChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~Yp~~-g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~  161 (334)
                      .++|+|+.|.+++++++.+.+++.+ +..    ...|+.. |..++|+++++++    |  ++++ +|++|+|+++++..
T Consensus        37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~  116 (429)
T 1yiz_A           37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA  116 (429)
T ss_dssp             HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence            3579999999999999999998876 322    3568654 7899999999986    6  5688 99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC----------CCCCCHHHHHHhcccCCceEEEEeCCCCcc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~----------~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt  231 (334)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+.          +|.+|+++++++++ +++++|++++|+|||
T Consensus       117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt  195 (429)
T 1yiz_A          117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL  195 (429)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence            9999999999999999999999999999999999998643          46799999999997 689999999999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      |.+++.+++++|++.    ++++|+||+|.+|.+.+.   ....+. ..++++++.|+||.||++|+|+||+++++++++
T Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~  275 (429)
T 1yiz_A          196 GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK  275 (429)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHH
Confidence            999998777777664    999999999999876432   122222 457899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          304 YLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       304 ~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      .+.....  .++.++++|.++.++|++
T Consensus       276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~  302 (429)
T 1yiz_A          276 NLQMVHQNCVYTCATPIQEAIAVGFET  302 (429)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccCCChHHHHHHHHHHhc
Confidence            8876543  578999999999999987

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=8.4e-34  Score=268.91  Aligned_cols=237  Identities=21%  Similarity=0.245  Sum_probs=198.1

Q ss_pred             CCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~  162 (334)
                      ...+.++|+|+.+++++++++.+.+++.+ +. ....|+.. ..++++++++++    +  +++++|++|+|+++++..+
T Consensus        23 d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~  101 (391)
T 3dzz_A           23 GVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAM  101 (391)
T ss_dssp             TTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHH
T ss_pred             eccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHH
Confidence            33556899999999999999999999876 33 23567544 567777777764    5  6789999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      +.+++++||+|+++.|+|..+...++..|++++.++.+   .+|.+|+++++++++++++++|++++|+||||.+++.++
T Consensus       102 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~  181 (391)
T 3dzz_A          102 VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEE  181 (391)
T ss_dssp             HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHH
T ss_pred             HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHH
Confidence            99999999999999999999999999999999999863   335599999999997568999999999999999999888


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCC-c--hhhhc-C-CCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLES-R--MEWVK-K-HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~-~--~~~~~-~-~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      +++|++.    ++++|+||+|.++.+.+. .  ..... . .++++++.|+||.+|++|+|+||++++ +++++.+....
T Consensus       182 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  261 (391)
T 3dzz_A          182 VKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESF  261 (391)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHH
Confidence            8888764    999999999999886432 1  22221 1 468999999999999999999999997 89988887663


Q ss_pred             ---CCCCCcHHHHHHHHHHhcC
Q 019868          310 ---QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ---~~~~~~~~~q~aa~~~L~~  328 (334)
                         ..++++.+++.++.++|++
T Consensus       262 ~~~~~~~~~~~~~~a~~~~l~~  283 (391)
T 3dzz_A          262 FLAGIGEPNLLAIPAAIAAYEE  283 (391)
T ss_dssp             HHHTCSSCCTTHHHHHHHHHHH
T ss_pred             HhhccCCCCHHHHHHHHHHHhc
Confidence               4578899999999988875

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1e-33  Score=272.31  Aligned_cols=236  Identities=20%  Similarity=0.207  Sum_probs=191.2

Q ss_pred             CCCeeecCCC---CCCCCCC--HHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhcCC------CCC--CEEEeCCHH
Q 019868           94 PEDIVKIDAN---ENPYGPP--PEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSGL------ESD--HILVGCGAD  156 (334)
Q Consensus        94 ~~~~i~l~~~---~~~~~~~--~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~~~------~~~--~I~~t~G~~  156 (334)
                      ..++|+|+.|   +++..++  +.+++++.+ +.  ....| +..|..++|+++++++.-      +++  +|++|+|++
T Consensus        48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t  127 (420)
T 4f4e_A           48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT  127 (420)
T ss_dssp             CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred             CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence            3578999999   5655544  899988876 22  33678 456899999999999832      567  899999999


Q ss_pred             HHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCCc
Q 019868          157 ELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (334)
Q Consensus       157 ~~i~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NP  230 (334)
                      +++..++  ..++++||+|++++|+|..|...++..|++++.++.  ++++.+|++.+++.+++  ++++++++++||||
T Consensus       128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP  207 (420)
T 4f4e_A          128 GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP  207 (420)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9999994  456899999999999999999999999999999996  45789999999999863  46789999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC--Cc---hhhhcCCCcEEEEcCCchhhcccccchheeEc---C
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P  298 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~--~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~---~  298 (334)
                      ||.+++.+++++|++.    ++++|+||+|.+|.++.  ..   .......+++++++||||.||++|+|+||+++   +
T Consensus       208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~  287 (420)
T 4f4e_A          208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS  287 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence            9999999999888765    99999999999998753  11   12224578999999999999999999999864   5


Q ss_pred             HHHHHH----HHHhc--CCCCCcHHHHHHHHHHhcCc
Q 019868          299 LSIIEY----LWRAK--QPYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       299 ~~~i~~----l~~~~--~~~~~~~~~q~aa~~~L~~~  329 (334)
                      +++++.    +....  ...+++.++|.++..+|++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  324 (420)
T 4f4e_A          288 KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASP  324 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCH
Confidence            665544    32222  23467889999999988874

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=1.9e-33  Score=267.50  Aligned_cols=247  Identities=16%  Similarity=0.104  Sum_probs=194.6

Q ss_pred             HHHHHHHhC-CCCCCeeecCCC---CCCCCCC--HHHHHHHhc-C-c--CCCCCCC-cChHHHHHHHHHhcCC------C
Q 019868           83 FEVLSIQLG-RKPEDIVKIDAN---ENPYGPP--PEVREALGQ-L-K--FPYIYPD-PESRRLRAALAKDSGL------E  145 (334)
Q Consensus        83 ~~~~~~~~~-~~~~~~i~l~~~---~~~~~~~--~~v~~al~~-~-~--~~~~Yp~-~g~~~lr~~lA~~~~~------~  145 (334)
                      +..+...+. ....++|+|+.|   +++..++  +.+++++.+ . .  ....|+. .|..++|++++++++.      +
T Consensus        13 ~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~   92 (397)
T 3fsl_A           13 ILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK   92 (397)
T ss_dssp             HHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence            333444333 334578999999   4555444  899988766 3 2  2357854 6899999999999842      6


Q ss_pred             CC--CEEEeCCHHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--C
Q 019868          146 SD--HILVGCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--E  217 (334)
Q Consensus       146 ~~--~I~~t~G~~~~i~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~  217 (334)
                      ++  +|++|+|+++++..++  ..++++||+|+++.|+|..|...++..|++++.++.  ++++.+|++++++.+++  +
T Consensus        93 ~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  172 (397)
T 3fsl_A           93 QQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQA  172 (397)
T ss_dssp             TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCT
T ss_pred             ccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCC
Confidence            78  8999999999999995  456799999999999999999999999999999986  46789999999999874  4


Q ss_pred             CceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC--Cc---hhhhcCCCcEEEEcCCchhhccc
Q 019868          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEWVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~--~~---~~~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      +++++++++||||||.+++.+++++|++.    ++++|+||+|.+|.++.  ..   .......+++++++||||.||++
T Consensus       173 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  252 (397)
T 3fsl_A          173 GSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLY  252 (397)
T ss_dssp             TCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCG
T ss_pred             CCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCc
Confidence            67888889999999999999988887764    99999999999998752  11   12224578999999999999999


Q ss_pred             ccchheeEc---CHHHHHHHHHh-----cC-CCCCcHHHHHHHHHHhcCc
Q 019868          289 GLRVGYGAF---PLSIIEYLWRA-----KQ-PYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       289 G~R~G~l~~---~~~~i~~l~~~-----~~-~~~~~~~~q~aa~~~L~~~  329 (334)
                      |+|+||+++   +++.++.+...     .. ..+++.++|.++.++|++.
T Consensus       253 G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  302 (397)
T 3fsl_A          253 GERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDE  302 (397)
T ss_dssp             GGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSH
T ss_pred             CCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCH
Confidence            999999974   55666544322     12 3456889999999999874

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=7e-34  Score=272.83  Aligned_cols=236  Identities=20%  Similarity=0.268  Sum_probs=197.3

Q ss_pred             CCeeecCCCCC-----CCCCCHHHHHHHhcCc--CCCCC-CCcChHHHHHHHHHhc-CC-CCC---CEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANEN-----PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~--~~~~Y-p~~g~~~lr~~lA~~~-~~-~~~---~I~~t~G~~~~i~~  161 (334)
                      .++|+|+.|++     ++++++.+.+++.+..  ....| +..|..+||+++++++ +. .++   +|++|+|+++++..
T Consensus        38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~  117 (418)
T 3rq1_A           38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH  117 (418)
T ss_dssp             GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred             CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH
Confidence            46899999976     8889999999988743  22567 4568999999999987 22 356   99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhccc---CCce-EEEEeCC-CCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVER---EKPK-CIFLTSP-NNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~---~~~~-~i~l~~p-~NPtG~~~  235 (334)
                      ++++++++||+|++++|+|..|...++..|++++.++. ++++.+|++++++++++   .+++ ++++++| |||||.++
T Consensus       118 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~  197 (418)
T 3rq1_A          118 LIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI  197 (418)
T ss_dssp             HHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred             HHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999996 45579999999999874   1555 8888999 99999999


Q ss_pred             cHHHHHHHHh---------C-CCeEEEccCCcCccCCCCch-h---hhc-CCCc--EEEEcCCchhhcccccchheeEc-
Q 019868          236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM-E---WVK-KHDN--LIVLRTFSKRAGLAGLRVGYGAF-  297 (334)
Q Consensus       236 ~~~~l~~l~~---------~-~~~lIvDeay~~~~~~~~~~-~---~~~-~~~~--~i~i~S~SK~~gl~G~R~G~l~~-  297 (334)
                      +.+++++|++         . ++++|+||+|.+|.+.+... .   ... ..++  +++++||||.||++|+|+||+++ 
T Consensus       198 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~  277 (418)
T 3rq1_A          198 EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGI  277 (418)
T ss_dssp             CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEE
T ss_pred             CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEE
Confidence            9999998877         5 89999999999988654211 1   111 2344  58999999999999999999999 


Q ss_pred             --CHHHHHHHHHhcCC------CCCcHHHHHHHHHHhcCch
Q 019868          298 --PLSIIEYLWRAKQP------YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       298 --~~~~i~~l~~~~~~------~~~~~~~q~aa~~~L~~~~  330 (334)
                        ++++++.+.+....      .+++.++|.++.++|++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  318 (418)
T 3rq1_A          278 SDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPA  318 (418)
T ss_dssp             ESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHH
T ss_pred             eCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHH
Confidence              99999988775432      4689999999999999864

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=2e-34  Score=277.76  Aligned_cols=238  Identities=18%  Similarity=0.130  Sum_probs=203.0

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CC-CCCCCc-ChHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FP-YIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~-~~Yp~~-g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+.++|+|+.|++++++++.+.+++.+ +. .. ..|++. |..++|+++|++++      +++++|++|+|+++++..+
T Consensus        42 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~  121 (437)
T 3g0t_A           42 TGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVS  121 (437)
T ss_dssp             HTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHH
T ss_pred             cCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHH
Confidence            346789999999999999999998876 32 33 668554 68999999999986      6789999999999999999


Q ss_pred             HHHhc--CCCC--EEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          163 MRCVL--DPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +.+++  ++||  +|+++.|+|..+...++..|++++.++. ++++.+|++++++++++.++++|++++||||||.+++.
T Consensus       122 ~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~  201 (437)
T 3g0t_A          122 FLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTD  201 (437)
T ss_dssp             HHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCH
T ss_pred             HHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCH
Confidence            99998  9999  9999999999999999999999999996 45677899999999954789999999999999999998


Q ss_pred             HHHHHHHhC----CCeEEEccCCcCccCCCC-ch-------hhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHH-
Q 019868          238 EDLLKILEM----PILVVLDEAYTEFSGLES-RM-------EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-  303 (334)
Q Consensus       238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~-------~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~-  303 (334)
                      +++++|++.    ++++|+||+|.++.+.+. ..       ..+. ..+++++++||||.||++|+|+||+++++++++ 
T Consensus       202 ~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  281 (437)
T 3g0t_A          202 EELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYER  281 (437)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHC
T ss_pred             HHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhh
Confidence            888777654    999999999998775421 22       2233 378999999999999999999999999999988 


Q ss_pred             H-----------------HHHhcC--CCCCcHHHHHHHHHHhcCch
Q 019868          304 Y-----------------LWRAKQ--PYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       304 ~-----------------l~~~~~--~~~~~~~~q~aa~~~L~~~~  330 (334)
                      .                 +.+...  .++++.++|.++.++|++.+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  327 (437)
T 3g0t_A          282 EYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACN  327 (437)
T ss_dssp             BCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcH
Confidence            7                 655443  37899999999999998754

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=5.6e-34  Score=271.89  Aligned_cols=249  Identities=16%  Similarity=0.171  Sum_probs=193.6

Q ss_pred             cHHHHHHHhCCCC-CCeeecCCCCC-CCCC-C---HHHHHHHhcC---cCCCCCC-CcChHHHHHHHHHhcC------CC
Q 019868           82 PFEVLSIQLGRKP-EDIVKIDANEN-PYGP-P---PEVREALGQL---KFPYIYP-DPESRRLRAALAKDSG------LE  145 (334)
Q Consensus        82 ~~~~~~~~~~~~~-~~~i~l~~~~~-~~~~-~---~~v~~al~~~---~~~~~Yp-~~g~~~lr~~lA~~~~------~~  145 (334)
                      .+..++.++...+ .++|+|+.|.+ ++.. +   +.+.+++...   .....|+ ..|.+++|++++++++      ++
T Consensus        14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~   93 (401)
T 7aat_A           14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK   93 (401)
T ss_dssp             HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc
Confidence            3444444443333 45899999986 5532 2   4677776653   2346785 4689999999999984      33


Q ss_pred             CCCEEE--eCCHHHHHHHHHHHhc---CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc--
Q 019868          146 SDHILV--GCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER--  216 (334)
Q Consensus       146 ~~~I~~--t~G~~~~i~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~--  216 (334)
                      +++|++  |+|+++++..++..+.   ++||+|++++|+|..|...++..|++++.++.+  +++.+|++.+++.+++  
T Consensus        94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  173 (401)
T 7aat_A           94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP  173 (401)
T ss_dssp             TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC
T ss_pred             cCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC
Confidence            889987  9999999998887664   899999999999999999999999999999853  4689999987777653  


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---c--h-hhhcCCCcEEEEcCCchhhc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R--M-EWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~--~-~~~~~~~~~i~i~S~SK~~g  286 (334)
                      ++++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++.   .  . ......+++++++||||.||
T Consensus       174 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  253 (401)
T 7aat_A          174 EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMG  253 (401)
T ss_dssp             TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC
T ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccc
Confidence            467899999999999999999999988775    899999999999987542   1  1 12245789999999999999


Q ss_pred             ccccchheeEc---CHH----HHHHHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          287 LAGLRVGYGAF---PLS----IIEYLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       287 l~G~R~G~l~~---~~~----~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                      ++|+|+||+++   +++    +++.+.+....  .+++..+|.++..+|++++
T Consensus       254 ~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  306 (401)
T 7aat_A          254 LYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPE  306 (401)
T ss_dssp             CGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHH
T ss_pred             cccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHH
Confidence            99999999886   555    44555544333  5677889998888887753

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=7.6e-34  Score=276.12  Aligned_cols=259  Identities=23%  Similarity=0.364  Sum_probs=206.2

Q ss_pred             CChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCC--CCHHHHHHHhc-CcC----CCCCC-CcChHHH
Q 019868           63 GDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYG--PPPEVREALGQ-LKF----PYIYP-DPESRRL  134 (334)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~~----~~~Yp-~~g~~~l  134 (334)
                      +..+++++...+.++.    +..+.....  ..++|+|+.|.++..  +++++.+++.+ +..    ...|+ ..|..+|
T Consensus        50 ~~~~~s~~~~~~~~s~----~~~~~~~~~--~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~l  123 (448)
T 3aow_A           50 VERFFSKKALEMRASE----VRELLKLVE--TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPL  123 (448)
T ss_dssp             GGGGCCHHHHHCCCCH----HHHHHHHHH--TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHH
T ss_pred             hHHHhhHHHhcCCCcH----HHHHHHhcc--CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHH
Confidence            3344566666655542    222222222  246899999887543  66778877765 221    24674 4589999


Q ss_pred             HHHHHHhc----CC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHH
Q 019868          135 RAALAKDS----GL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL  209 (334)
Q Consensus       135 r~~lA~~~----~~-~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~  209 (334)
                      |+++++++    |+ ++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|+++
T Consensus       124 r~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~  202 (448)
T 3aow_A          124 RETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEI  202 (448)
T ss_dssp             HHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHH
T ss_pred             HHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHH
Confidence            99999999    88 7889999999999999999999999999999999999999999999999999996544 599999


Q ss_pred             HHHhcc----c-CCceEEE-EeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEE
Q 019868          210 IADAVE----R-EKPKCIF-LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLI  276 (334)
Q Consensus       210 l~~~l~----~-~~~~~i~-l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i  276 (334)
                      ++++++    + .++++|+ +++|+||||.+++.+++++|++.    ++++|+||+|.++.+++.   ....++..++++
T Consensus       203 L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi  282 (448)
T 3aow_A          203 LEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVI  282 (448)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEE
T ss_pred             HHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEE
Confidence            999886    3 3789985 57999999999999888777764    999999999999886432   222334457899


Q ss_pred             EEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      +++||||.|+ +|+|+||+++++++++.+.+....  ++.+.++|.++.++|++.
T Consensus       283 ~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~  336 (448)
T 3aow_A          283 YLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG  336 (448)
T ss_dssp             EEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTT
T ss_pred             EEccchhhcc-ccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhC
Confidence            9999999999 999999999999999988876654  678999999999999874

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=9.4e-34  Score=271.51  Aligned_cols=257  Identities=19%  Similarity=0.299  Sum_probs=208.3

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC-CCCCCC-cChHHHHHHHHHhcC-
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDSG-  143 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~lA~~~~-  143 (334)
                      ++++..+.++. +..+.....+....+.++|+|+.|++++++++.+.+++ + +.. ...|+. .+..++|++++++++ 
T Consensus        17 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~   94 (409)
T 2gb3_A           17 SDRVLLTEESP-IRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKR   94 (409)
T ss_dssp             CHHHHSCCCCT-TGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHhhcCCccH-HHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence            44455555553 44444444444445667999999999988888999988 5 433 356854 478999999999973 


Q ss_pred             -----CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhccc
Q 019868          144 -----LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER  216 (334)
Q Consensus       144 -----~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~  216 (334)
                           +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.++.++  ++.+ +++++++++ 
T Consensus        95 ~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~-  172 (409)
T 2gb3_A           95 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN-  172 (409)
T ss_dssp             TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-
T ss_pred             HhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-
Confidence                 5678999999999999999999999999999999999999999999999999999653  4555 889999887 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcC-CCcEEEEcCCchhhcccccc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLR  291 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R  291 (334)
                      +++++|++++|+||||.+++.+++++|++.    ++++|+||+|.++.+.+.....+.. .+++++++||||.||++|+|
T Consensus       173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r  252 (409)
T 2gb3_A          173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGAR  252 (409)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGC
T ss_pred             cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccce
Confidence            589999999999999999998888777664    8999999999998764322222222 46799999999999999999


Q ss_pred             hheeEcCH-HHHHHHHHhcCCC-CCcHHHHHHHHHHhcC
Q 019868          292 VGYGAFPL-SIIEYLWRAKQPY-NVSVAAEVAACAALQN  328 (334)
Q Consensus       292 ~G~l~~~~-~~i~~l~~~~~~~-~~~~~~q~aa~~~L~~  328 (334)
                      +||+++++ ++++.+......+ +++.++|.++.++|+.
T Consensus       253 ~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~  291 (409)
T 2gb3_A          253 VGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNL  291 (409)
T ss_dssp             CEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC
T ss_pred             EEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhc
Confidence            99999988 9999887766555 8899999999999965

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=2.9e-34  Score=276.65  Aligned_cols=238  Identities=19%  Similarity=0.210  Sum_probs=200.2

Q ss_pred             CCeeecCCCCC-CCCCCHHH--HHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhc-----CCCCCC---EEEeCCHHHHH
Q 019868           95 EDIVKIDANEN-PYGPPPEV--REALGQ-LK--FPYIYPDP-ESRRLRAALAKDS-----GLESDH---ILVGCGADELI  159 (334)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v--~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~-----~~~~~~---I~~t~G~~~~i  159 (334)
                      .++|+|+.|++ +++.++.+  .+++.+ +.  ....|++. |..++|+++|+++     ++++++   |++|+|+++++
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al  126 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL  126 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence            56899999999 88877766  666654 32  24678654 7999999999999     888889   99999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEeeCCC-CCCCCHHHHHHhccc--CCceEEEEeCCCCccccCC
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~~~~-~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~  235 (334)
                      ..++++++++||+|+++.|+|..+...++. .|++++.++.++ ++.+|++++++++++  .+++++++++||||||.++
T Consensus       127 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~  206 (430)
T 2x5f_A          127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP  206 (430)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence            999999999999999999999999999998 999999998643 478999999999873  2789999999999999999


Q ss_pred             cHHHHHHHHh---------CCCeEEEccCCcCccCCCC---chh-hhcC-CCc---EEEEcCCchhhcccccchheeEc-
Q 019868          236 NDEDLLKILE---------MPILVVLDEAYTEFSGLES---RME-WVKK-HDN---LIVLRTFSKRAGLAGLRVGYGAF-  297 (334)
Q Consensus       236 ~~~~l~~l~~---------~~~~lIvDeay~~~~~~~~---~~~-~~~~-~~~---~i~i~S~SK~~gl~G~R~G~l~~-  297 (334)
                      +.+++++|++         .++++|+||+|.++.+.+.   ... .+.. .++   +++++||||.||++|+|+||+++ 
T Consensus       207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~  286 (430)
T 2x5f_A          207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG  286 (430)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred             CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence            9777766654         4789999999999886432   222 2323 678   99999999999999999999999 


Q ss_pred             --CHHHHHHHHHhc------CCCCCcHHHHHHHHHHhc-Cchhh
Q 019868          298 --PLSIIEYLWRAK------QPYNVSVAAEVAACAALQ-NPIYL  332 (334)
Q Consensus       298 --~~~~i~~l~~~~------~~~~~~~~~q~aa~~~L~-~~~~~  332 (334)
                        ++++++.+....      ..++++.++|.++.++|+ +.+|.
T Consensus       287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~  330 (430)
T 2x5f_A          287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFD  330 (430)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHH
T ss_pred             cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHH
Confidence              999999887655      347899999999999999 76554

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=3.7e-34  Score=275.67  Aligned_cols=231  Identities=16%  Similarity=0.146  Sum_probs=193.0

Q ss_pred             CeeecCCCCCC---CCCCHHHHHHHhcC----c--CCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHH--HHHH
Q 019868           96 DIVKIDANENP---YGPPPEVREALGQL----K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELI--DLIM  163 (334)
Q Consensus        96 ~~i~l~~~~~~---~~~~~~v~~al~~~----~--~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i--~~~~  163 (334)
                      .+|+|+.|+++   +++++.+++++.+.    .  ...+|++. |..+||+++|+++++++++|++|+|+++++  ..++
T Consensus        33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~  112 (422)
T 3d6k_A           33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLIS  112 (422)
T ss_dssp             CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHH
T ss_pred             CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHH
Confidence            37999999998   88888888877542    1  23578655 799999999999999999999999999987  6777


Q ss_pred             HHhcCC------------CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE-EeCCCCc
Q 019868          164 RCVLDP------------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNP  230 (334)
Q Consensus       164 ~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~-l~~p~NP  230 (334)
                      +.+.++            +|+|++++|+|..|...++..|++++.+|.+++ ++|++++++.+++.++++|+ +++||||
T Consensus       113 ~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NP  191 (422)
T 3d6k_A          113 WSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNP  191 (422)
T ss_dssp             HHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTT
T ss_pred             HHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCC
Confidence            877665            347999999999999999999999999996544 59999999999744789988 5799999


Q ss_pred             cccCCcHHHHHHHHh----C-CCeEEEccCCcC--ccCCC-C--ch-hh---hcCCCcEEEEcCCchhhcccccchheeE
Q 019868          231 DGSIINDEDLLKILE----M-PILVVLDEAYTE--FSGLE-S--RM-EW---VKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       231 tG~~~~~~~l~~l~~----~-~~~lIvDeay~~--~~~~~-~--~~-~~---~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      ||.+++.+++++|++    . ++++|+||+|.+  |.+.+ .  .. ..   .+..+++++++||||. +++|+|+||++
T Consensus       192 tG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~  270 (422)
T 3d6k_A          192 TGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFA  270 (422)
T ss_dssp             TCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEE
Confidence            999999998887765    3 899999999985  54432 1  11 11   2356899999999998 78999999999


Q ss_pred             cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++.+.+....  ++++.++|.++.++|++
T Consensus       271 ~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~  304 (422)
T 3d6k_A          271 SSKENIEWYASHANVRGIGPNKLNQLAHAQFFGD  304 (422)
T ss_dssp             CCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred             eCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence            999999998877654  67999999999999998

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=1.8e-33  Score=273.27  Aligned_cols=259  Identities=14%  Similarity=0.135  Sum_probs=201.8

Q ss_pred             hhhhCCCCCCCcHHHHHHHhCCCCC-CeeecCCCCC-CCC----CCHHHHHHHhcC-----cCCCCC-CCcChHHHHHHH
Q 019868           71 LRKLKPYQPILPFEVLSIQLGRKPE-DIVKIDANEN-PYG----PPPEVREALGQL-----KFPYIY-PDPESRRLRAAL  138 (334)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~~~~~-~~~----~~~~v~~al~~~-----~~~~~Y-p~~g~~~lr~~l  138 (334)
                      +..+.+.+ ..++..+..++..++. ++|+|++|.+ ++.    ..+.+.+++..+     .....| +..|.+++|+++
T Consensus        25 ~~~~~~~~-~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~i  103 (448)
T 3meb_A           25 FSGFPASP-PDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAA  103 (448)
T ss_dssp             TTTCCCCC-CCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHH
T ss_pred             HhcCCCCC-CChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHH
Confidence            34455443 3344445555554444 4799999987 553    236777774432     234668 556899999999


Q ss_pred             HHhc-CCC-----CCCEEE--eCCHHHHHHH--HHHHhcCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeC-CC--
Q 019868          139 AKDS-GLE-----SDHILV--GCGADELIDL--IMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPR-KS--  201 (334)
Q Consensus       139 A~~~-~~~-----~~~I~~--t~G~~~~i~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~-~~--  201 (334)
                      ++++ |.+     +++|++  |+|+++++.+  .+..++++||+|++++|+|..|...++    ..|++++.++. ++  
T Consensus       104 a~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~  183 (448)
T 3meb_A          104 QFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDG  183 (448)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTS
T ss_pred             HHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecccccc
Confidence            9998 876     689999  9999999988  455678899999999999999999999    99999999996 44  


Q ss_pred             CCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-----c-hhhh
Q 019868          202 DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----R-MEWV  269 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-----~-~~~~  269 (334)
                      ++.+|++++++.+++  .+++++++++||||||.+++.+++++|++.    ++++|+||+|++|.+++.     . ....
T Consensus       184 ~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~  263 (448)
T 3meb_A          184 ELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFV  263 (448)
T ss_dssp             CSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHH
T ss_pred             CCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHh
Confidence            489999999999874  357788889999999999999998888764    999999999999987541     1 1122


Q ss_pred             cCCCcEEEEcCCchhhcccccchhee--Ec--------C-H----HHHHHHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          270 KKHDNLIVLRTFSKRAGLAGLRVGYG--AF--------P-L----SIIEYLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       270 ~~~~~~i~i~S~SK~~gl~G~R~G~l--~~--------~-~----~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                      ...+++++++||||.||++|+|+||+  ++        + +    ++++.+.+....  .+++.++|.++.++|++.+
T Consensus       264 ~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~  341 (448)
T 3meb_A          264 DAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKR  341 (448)
T ss_dssp             HTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred             hcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChH
Confidence            45688999999999999999999998  66        4 4    666666654332  4688999999999999863

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-33  Score=270.73  Aligned_cols=232  Identities=25%  Similarity=0.413  Sum_probs=196.7

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcC-CCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRC  165 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~~  165 (334)
                      ++|+|+.|++++++++.+.+++.+ +.. ...|+. .|..++|+++++++    |  ++++ +|++|+|+++++..++++
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~  105 (411)
T 2o0r_A           26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG  105 (411)
T ss_dssp             TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred             CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence            479999999998889999998876 332 367854 47899999999987    5  4677 999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC---CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ++++||+|+++.|+|..+...++..|++++.++.+.   ++.+|+++++++++ +++++|++++|+||||.+++.+++++
T Consensus       106 ~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~~~~l~~  184 (411)
T 2o0r_A          106 LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT-PRTRALIINSPHNPTGAVLSATELAA  184 (411)
T ss_dssp             HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc-cCceEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999998643   46799999999997 68999999999999999999977777


Q ss_pred             HHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CC
Q 019868          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~  312 (334)
                      |++.    ++++|+||+|.++.+.+.   ....+. ..++++++.||||.||++|+|+||+++++++++.+.+...  .+
T Consensus       185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (411)
T 2o0r_A          185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY  264 (411)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence            7654    999999999999876432   122222 2578999999999999999999999999999998876654  47


Q ss_pred             CCcHHHHHHHHHHhcC
Q 019868          313 NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ~~~~~~q~aa~~~L~~  328 (334)
                      +.+.++|.++.++|++
T Consensus       265 ~~~~~~~~a~~~~l~~  280 (411)
T 2o0r_A          265 VGGAPFQPAVALALDT  280 (411)
T ss_dssp             CCCTTHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhC
Confidence            7888899999998874

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.6e-33  Score=271.55  Aligned_cols=256  Identities=19%  Similarity=0.282  Sum_probs=201.5

Q ss_pred             ChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHH--H-------------HHHHhcCcCCCCC-C
Q 019868           64 DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE--V-------------REALGQLKFPYIY-P  127 (334)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--v-------------~~al~~~~~~~~Y-p  127 (334)
                      ..++++++..+.++ ++..+...+.+.   +.++|+|+.|.++...+|.  .             .++...   ...| +
T Consensus         4 ~~~~s~~~~~~~~~-~~~~~~~~~~~~---~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~   76 (425)
T 2r2n_A            4 ARFITAASAARNPS-PIRTMTDILSRG---PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR---ALQYSP   76 (425)
T ss_dssp             GGGSCHHHHTCCCC-SGGGHHHHHHHS---CTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH---HTSCCC
T ss_pred             hHHHHHHHhcCCCc-hHHHHHHHhhcC---CCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh---hcCCCC
Confidence            34567777777776 344444444432   2468999999987654431  0             011111   1457 4


Q ss_pred             CcChHHHHHHHHHhc----CCCC---------CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeE
Q 019868          128 DPESRRLRAALAKDS----GLES---------DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAV  194 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~----~~~~---------~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v  194 (334)
                      ..|.++||+++++++    |++.         ++|++|+|+++++..++++++++||+|++++|+|..|...++..|+++
T Consensus        77 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~  156 (425)
T 2r2n_A           77 SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNI  156 (425)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEE
Confidence            568999999999886    6643         699999999999999999999999999999999999999999999999


Q ss_pred             EEeeCCCCCCCCHHHHHHhccc-----------CCceEEEE-eCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcC
Q 019868          195 VKVPRKSDFSLNVELIADAVER-----------EKPKCIFL-TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE  258 (334)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~l~~-----------~~~~~i~l-~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~  258 (334)
                      +.++.+++ ++|++++++.+++           .++++|++ ++||||||.+++.+++++|++.    ++++|+||+|.+
T Consensus       157 ~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~  235 (425)
T 2r2n_A          157 INVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYF  235 (425)
T ss_dssp             EEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG
T ss_pred             EEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            99986443 6899999998862           35788877 5999999999999977777664    899999999998


Q ss_pred             ccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          259 FSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       259 ~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +.+.+.   ....++..+++++++||||.|+ +|+|+||+++++++++.+.+....  ++++.++|.++.++|++
T Consensus       236 ~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~  309 (425)
T 2r2n_A          236 LQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHE  309 (425)
T ss_dssp             GBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence            876432   2223344678999999999999 999999999999999988876543  78999999999999986

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=1.8e-33  Score=269.46  Aligned_cols=237  Identities=19%  Similarity=0.192  Sum_probs=191.1

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhcC--cCCCCC-CCcChHHHHHHHHHhc-CCC-----CCCEE--EeCCHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDS-GLE-----SDHIL--VGCGADELIDL  161 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~--~~~~~Y-p~~g~~~lr~~lA~~~-~~~-----~~~I~--~t~G~~~~i~~  161 (334)
                      ..++|+|+.|++ +++.++.+.+++.+.  .....| +..|..+||+++++++ +..     +++|.  .+.|+++++..
T Consensus        40 ~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~  119 (409)
T 4eu1_A           40 AKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRI  119 (409)
T ss_dssp             CSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHH
T ss_pred             CcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHH
Confidence            357899999997 887777777777764  233667 5678999999999987 665     67884  48888888877


Q ss_pred             H---HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccC
Q 019868          162 I---MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       162 ~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~  234 (334)
                      +   +..++++||+|++++|+|..|...++..|++++.++.  ++++.+|++++++.+++  .+++++++++||||||.+
T Consensus       120 ~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~  199 (409)
T 4eu1_A          120 GGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD  199 (409)
T ss_dssp             HHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred             HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC
Confidence            5   4445689999999999999999999999999999985  45689999999999863  356677779999999999


Q ss_pred             CcHHHHHHHHhC----CCeEEEccCCcCccCCCC-----ch-hhhcCCCcEEEEcCCchhhcccccchhee--E-cCHH-
Q 019868          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-----RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYG--A-FPLS-  300 (334)
Q Consensus       235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-----~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l--~-~~~~-  300 (334)
                      ++.+++++|++.    ++++|+||+|.+|.+++.     .. ...+..+++++++||||.||++|+|+||+  + .+++ 
T Consensus       200 ~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~  279 (409)
T 4eu1_A          200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE  279 (409)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH
T ss_pred             CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH
Confidence            999998887664    999999999999987541     11 22345688999999999999999999996  4 4667 


Q ss_pred             ---HHHHHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          301 ---IIEYLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       301 ---~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                         +++.+.+....  ++++.++|.++.++|++.+
T Consensus       280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  314 (409)
T 4eu1_A          280 AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQ  314 (409)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHH
Confidence               66666655432  5778999999999998753

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=5.1e-33  Score=264.27  Aligned_cols=232  Identities=21%  Similarity=0.251  Sum_probs=189.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHH-HHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRR-LRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~-lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      +++|+|+.+++++++++.+.+++.+ +. ....|+.. ..+ +|+++|+++    |  +++++|++|+|+++++..++++
T Consensus        28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~  106 (390)
T 1d2f_A           28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ  106 (390)
T ss_dssp             --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            4689999999999999999999876 32 23668665 677 999999986    5  6788999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC---CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ++++||+|+++.|+|..+...++..|++++.+|.+.   +|.+|++++++++++.++++|++++||||||.+++.+++++
T Consensus       107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~  186 (390)
T 1d2f_A          107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI  186 (390)
T ss_dssp             SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred             hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence            999999999999999999999999999999998532   35689999999997447899999999999999999766666


Q ss_pred             HHhC----CCeEEEccCCcCccCCCC-chh--hhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcC---C
Q 019868          243 ILEM----PILVVLDEAYTEFSGLES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ---P  311 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~---~  311 (334)
                      |++.    ++++|+||+|.++.+.+. ...  .+...-... +.||||.||++|+|+||++++ +++++.+.....   .
T Consensus       187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  265 (390)
T 1d2f_A          187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG  265 (390)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc
Confidence            6543    999999999999876432 111  121110123 999999999999999999985 788888876553   3


Q ss_pred             C-CCcHHHHHHHHHHhcC
Q 019868          312 Y-NVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~-~~~~~~q~aa~~~L~~  328 (334)
                      + +++.++|.++.++|++
T Consensus       266 ~~~~~~~~~~a~~~~l~~  283 (390)
T 1d2f_A          266 LSSPSVLALTAHIAAYQQ  283 (390)
T ss_dssp             CCSCCHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhc
Confidence            4 7899999999998875

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=3.7e-33  Score=267.40  Aligned_cols=233  Identities=19%  Similarity=0.223  Sum_probs=192.0

Q ss_pred             CCeeecCCCCC----CCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhcC------------CCCCCEEEeCC
Q 019868           95 EDIVKIDANEN----PYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDSG------------LESDHILVGCG  154 (334)
Q Consensus        95 ~~~i~l~~~~~----~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~~------------~~~~~I~~t~G  154 (334)
                      .++|+|+.|.+    .+++++.+.+++.+ +.  ....|+. .+..++|+++|++++            +++++|++|+|
T Consensus        33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g  112 (416)
T 1bw0_A           33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG  112 (416)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred             CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence            56899999985    57888999988875 32  2356854 578999999999998            78899999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      +++++..++.+++++||+|+++.|+|..|...++..|++++.++.+.  ++.+|+++++++++ ++++++++++|+||||
T Consensus       113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG  191 (416)
T 1bw0_A          113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNPCG  191 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc-cCCeEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999998532  47799999999997 5789999999999999


Q ss_pred             cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-----c--hhhhcCCCcEEEEcCCchhhcccccchheeEcCHH-
Q 019868          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-  300 (334)
Q Consensus       233 ~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-----~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-  300 (334)
                      .+++.+++++|++.    ++++|+||+|.++.+.+.     .  ...+...+++++++||||.|+++|+|+||++++++ 
T Consensus       192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~  271 (416)
T 1bw0_A          192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH  271 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence            99997777777654    999999999999875432     1  12223345789999999999999999999998653 


Q ss_pred             -----HHHHHHHhc-CCCCCcHHHHHHHHHHhcC
Q 019868          301 -----IIEYLWRAK-QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       301 -----~i~~l~~~~-~~~~~~~~~q~aa~~~L~~  328 (334)
                           +...+.+.. ..+++++++|.++.++|++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  305 (416)
T 1bw0_A          272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLN  305 (416)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhc
Confidence                 443333332 3478999999999999985

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=1.3e-33  Score=271.98  Aligned_cols=263  Identities=16%  Similarity=0.108  Sum_probs=196.9

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCC---CCC--CCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHH
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE---NPY--GPPPEVREALGQL---KFPYIY-PDPESRRLRAAL  138 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~~--~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~l  138 (334)
                      .+++.+++.. |.+++..+.+++..++.+.|||++|.   +.-  +..+.|++|.+.+   ...+.| |..|.++||+++
T Consensus        18 ~~~~~~v~~~-p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ai   96 (420)
T 4h51_A           18 AERWQKIQAQ-APDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEA   96 (420)
T ss_dssp             HHHHHTCCCC-CCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred             hHHHhCCCCC-CCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHH
Confidence            4556777766 45666667777766666789999993   222  2347888886653   334679 788999999999


Q ss_pred             HHhc-C--CCCCC--EEEeCCHHHHHHHHHHH----hcCCCCEEEEcCCCChhHHHHHHHCCCeEE-Eee--CCCCCCCC
Q 019868          139 AKDS-G--LESDH--ILVGCGADELIDLIMRC----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVV-KVP--RKSDFSLN  206 (334)
Q Consensus       139 A~~~-~--~~~~~--I~~t~G~~~~i~~~~~~----l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~-~v~--~~~~~~~d  206 (334)
                      ++++ |  ...+.  .+.|.|++.++...+..    +++|||+|++++|+|++|...++..|++.+ .++  ..+++.+|
T Consensus        97 a~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d  176 (420)
T 4h51_A           97 VKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLN  176 (420)
T ss_dssp             HHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEEC
T ss_pred             HHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCC
Confidence            9986 3  23333  34478888877665553    457999999999999999999999999744 444  34567889


Q ss_pred             HHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc------hhhhcCCCc
Q 019868          207 VELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDN  274 (334)
Q Consensus       207 ~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~------~~~~~~~~~  274 (334)
                      .+.+.+.++.  ++++++++++||||||.+++.+++++|++.    ++++|+||+|++|.+++..      .......++
T Consensus       177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~  256 (420)
T 4h51_A          177 FEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE  256 (420)
T ss_dssp             HHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred             HHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce
Confidence            9888887642  466788888999999999999999999986    9999999999999875421      122345678


Q ss_pred             EEEEcCCchhhcccccchheeEcCHHHHHH-------HHHhc--CCCCCcHHHHHHHHHHhcCchh
Q 019868          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-------LWRAK--QPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~-------l~~~~--~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +++++||||+|+++|||+||++++.+.++.       +....  ...+++..+|.++..+|.|+++
T Consensus       257 ~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l  322 (420)
T 4h51_A          257 VLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNEL  322 (420)
T ss_dssp             CEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHH
T ss_pred             EEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHH
Confidence            999999999999999999999875433322       22222  2367899999999999998653

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=7.7e-33  Score=262.30  Aligned_cols=241  Identities=19%  Similarity=0.283  Sum_probs=196.8

Q ss_pred             HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHh----cC--CCCCCEEEeCC
Q 019868           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCG  154 (334)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~----~~--~~~~~I~~t~G  154 (334)
                      ++...++++  +.++|+|+.+++++++++.+.+++.+ +. ..+.|+. +..+++++++++    ++  +++++|++|+|
T Consensus        22 ~d~~~~~~~--~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g   98 (391)
T 4dq6_A           22 WSEMEKKYG--TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPG   98 (391)
T ss_dssp             HHCHHHHHS--CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESC
T ss_pred             eeecccccC--CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCC
Confidence            343445565  35789999999999999999999876 33 2355644 345566665554    57  77899999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC----CCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK----SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~----~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +++++..++.+++++||+|+++.|+|..+...++..|++++.++.+    .+|.+|++++++++++  +++|++++|+||
T Consensus        99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~np  176 (391)
T 4dq6_A           99 VIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNP  176 (391)
T ss_dssp             HHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTT
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCC
Confidence            9999999999999999999999999999999999999999999865    3456899999999974  999999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcC--CCcEEEEcCCchhhcccccchheeEcCH-H
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-S  300 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~  300 (334)
                      ||.+++.+++++|++.    ++++|+||+|.++.+.+.   ....+..  .+++++++||||.+|++|+|+||+++++ +
T Consensus       177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  256 (391)
T 4dq6_A          177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK  256 (391)
T ss_dssp             TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence            9999999888888764    999999999999886432   1222211  4788999999999999999999999975 8


Q ss_pred             HHHHHHHhcC---CCCCcHHHHHHHHHHhcC
Q 019868          301 IIEYLWRAKQ---PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       301 ~i~~l~~~~~---~~~~~~~~q~aa~~~L~~  328 (334)
                      +++.+.+...   .++++.++|.++.++|++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (391)
T 4dq6_A          257 DYKLLDDAFTRIDIKRNNCFSLVATEASYNN  287 (391)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence            8888876643   357899999999998875

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=9.4e-34  Score=274.54  Aligned_cols=229  Identities=20%  Similarity=0.292  Sum_probs=188.4

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCCC-CcChHHHHHHHHHhc----CCCCCCEEEeCCHHHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELID  160 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Yp-~~g~~~lr~~lA~~~----~~~~~~I~~t~G~~~~i~  160 (334)
                      ++.++|+|+.|++++++++.+++++.+ +.      ....|+ ..|..+||+++++++    ++++++|++|+|+++++.
T Consensus        67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~  146 (449)
T 3qgu_A           67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA  146 (449)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence            456799999999999999999988765 22      235684 468999999999998    788899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCe----------EEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~----------v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      .+ ..++++||+|++++|+|..|...++..|++          ++.++.++  ++..|+++    .  +++++|++++||
T Consensus       147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~v~l~~p~  219 (449)
T 3qgu_A          147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSK----A--KRTDIIFFCSPN  219 (449)
T ss_dssp             HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGG----C--CCCSEEEEESSC
T ss_pred             HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhH----c--CCCCEEEEeCCC
Confidence            99 778999999999999999999999999998          99888543  44455432    1  578999999999


Q ss_pred             CccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhh-cCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       229 NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ||||.+++.+++++|++.    ++++|+||+|.+|.+++.   ....+ ...+++++++||||.||++|+|+||++++++
T Consensus       220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  299 (449)
T 3qgu_A          220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA  299 (449)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred             CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence            999999999999988764    999999999999886532   12222 2357789999999999999999999999887


Q ss_pred             HHH--------HHHHhc--CCCCCcHHHHHHHHHHhcC
Q 019868          301 IIE--------YLWRAK--QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       301 ~i~--------~l~~~~--~~~~~~~~~q~aa~~~L~~  328 (334)
                      +++        .+.+..  ..++.+.++|.++.++|++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  337 (449)
T 3qgu_A          300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP  337 (449)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred             HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence            764        333322  2357899999999999986

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=9.9e-33  Score=263.54  Aligned_cols=234  Identities=24%  Similarity=0.376  Sum_probs=192.9

Q ss_pred             CCCCeeecCCCCCCCC--CCHHHHHHHhc-Cc----CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK----FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~----~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~  158 (334)
                      ++.++|+|+.|.++..  +++.+.+++.+ +.    ... |+. .+..++|+++|+++    |  +++++|++|+|++++
T Consensus        32 ~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a  110 (407)
T 2zc0_A           32 KGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGA  110 (407)
T ss_dssp             SSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHH
T ss_pred             CCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHH
Confidence            3457899999876543  56778877764 21    124 854 47899999999998    7  568899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc----c-CCceEEE-EeCCCCccc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDG  232 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~----~-~~~~~i~-l~~p~NPtG  232 (334)
                      +..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|+++++++++    + .++++|+ +++|+||||
T Consensus       111 ~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG  189 (407)
T 2zc0_A          111 LDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMG  189 (407)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTC
T ss_pred             HHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCC
Confidence            99999999999999999999999999999999999999986444 489999999886    4 3788875 679999999


Q ss_pred             cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       233 ~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      .+++.+++++|++.    ++++|+||+|.++.+.+.   ....++..+++++++||||.|+ +|+|+||+++++++++.+
T Consensus       190 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~  268 (407)
T 2zc0_A          190 VTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKV  268 (407)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHH
Confidence            99999966666554    999999999999876432   1222333468999999999999 999999999999999998


Q ss_pred             HHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          306 WRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       306 ~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      ......  ++.+++.|.++.++|++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~l~~~  294 (407)
T 2zc0_A          269 LMQKQPIDFCAPAISQYIALEYLKRG  294 (407)
T ss_dssp             HHHHTTTTSSSCHHHHHHHHHHHHTT
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHcC
Confidence            877665  567999999999999875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=1.5e-32  Score=261.15  Aligned_cols=236  Identities=15%  Similarity=0.154  Sum_probs=188.9

Q ss_pred             CCCeeecCCCC---CC--CCCCHHHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhc---C---CCCCCEEE--eCCHH
Q 019868           94 PEDIVKIDANE---NP--YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHILV--GCGAD  156 (334)
Q Consensus        94 ~~~~i~l~~~~---~~--~~~~~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~---~---~~~~~I~~--t~G~~  156 (334)
                      +.++|+|+.|+   +.  .++++.+.+++.+. .  ..+.| +..|..++|+++++++   +   +++++|++  |+|++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~  104 (396)
T 2q7w_A           25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT  104 (396)
T ss_dssp             ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred             CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence            35689999998   22  25668999888753 2  34678 6678999999999998   2   35789998  99999


Q ss_pred             HHHHHHHHHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccC--CceEEEEeCCCCc
Q 019868          157 ELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNP  230 (334)
Q Consensus       157 ~~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NP  230 (334)
                      +++..+++.+  +++||+|+++.|+|..|...++..|++++.++.+  +++.+|++++++.+++.  +++++++++||||
T Consensus       105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np  184 (396)
T 2q7w_A          105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP  184 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9999998765  3699999999999999999999999999999863  56889999999998642  4678888999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC--C--chh-hhcCCCcEEEEcCCchhhcccccchheeEc---C
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P  298 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~--~--~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~---~  298 (334)
                      ||.+++.+++++|++.    ++++|+||+|.+|.+++  .  ... .....+++++++||||.||++|+|+||+++   +
T Consensus       185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~  264 (396)
T 2q7w_A          185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAAD  264 (396)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCC
Confidence            9999999988888764    89999999999987642  1  122 222357899999999999999999999997   5


Q ss_pred             H----HHHHHHHHhc-CCC-CCcHHHHHHHHHHhcCc
Q 019868          299 L----SIIEYLWRAK-QPY-NVSVAAEVAACAALQNP  329 (334)
Q Consensus       299 ~----~~i~~l~~~~-~~~-~~~~~~q~aa~~~L~~~  329 (334)
                      +    ++++.+.+.. ..+ +++.++|.++.++|++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  301 (396)
T 2q7w_A          265 SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSND  301 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcCh
Confidence            5    4555555432 334 45999999999999875

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=8.1e-33  Score=263.74  Aligned_cols=233  Identities=16%  Similarity=0.238  Sum_probs=194.0

Q ss_pred             CCeeecCCCCC-CCCCCHHHHHHHhc-CcC--CCCC-CCcChHHHHHHHHHhc----CCC--C-CCEEEeCCHHHHHHHH
Q 019868           95 EDIVKIDANEN-PYGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLI  162 (334)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v~~al~~-~~~--~~~Y-p~~g~~~lr~~lA~~~----~~~--~-~~I~~t~G~~~~i~~~  162 (334)
                      .++|||+.|++ ++++++.+++++.+ +..  ...| +..|..++++++++++    |++  + ++|++|+|+++++..+
T Consensus        39 ~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~  118 (407)
T 3nra_A           39 GRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLA  118 (407)
T ss_dssp             SCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred             CceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence            35899999754 58888999988876 321  2357 4557788888777664    653  4 7999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC------CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR------KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~------~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      +.+++++||+|+++.|+|..+...++..|++++.++.      ++++.+|+++++++++ .++++|++++||||||.+++
T Consensus       119 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~  197 (407)
T 3nra_A          119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK-AGARVFLFSNPNNPAGVVYS  197 (407)
T ss_dssp             HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH-TTCCEEEEESSCTTTCCCCC
T ss_pred             HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh-hCCcEEEEcCCCCCCCcccC
Confidence            9999999999999999999999999999999999996      4678999999999997 48999999999999999999


Q ss_pred             HHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhh--cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          237 DEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      .+++++|++.    ++++|+||+|..+.+.+..   ....  ...+++++++||||.||++|+|+||+++++++++.+.+
T Consensus       198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~  277 (407)
T 3nra_A          198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK  277 (407)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH
Confidence            7777777664    9999999999998764322   2222  24678999999999999999999999999999998877


Q ss_pred             hcCC--CCCcHHHHHHHHHHhcC
Q 019868          308 AKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       308 ~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ....  ++.++++|.++.++|++
T Consensus       278 ~~~~~~~~~~~~~~~a~~~~l~~  300 (407)
T 3nra_A          278 LQAIVSLRAAGYSQAVLRGWFDE  300 (407)
T ss_dssp             HHHHHTSSSCHHHHGGGGGTTCC
T ss_pred             HHhhhccCCChHHHHHHHHHHhc
Confidence            6554  56788999999988875

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=2.9e-32  Score=260.89  Aligned_cols=238  Identities=16%  Similarity=0.189  Sum_probs=194.0

Q ss_pred             CCCCeeecCCCCC--C---CCCCHHHHHHHhcCc----CCCCC-CCcChHHHHHHHHHhc-CC-----CCCCEEE--eCC
Q 019868           93 KPEDIVKIDANEN--P---YGPPPEVREALGQLK----FPYIY-PDPESRRLRAALAKDS-GL-----ESDHILV--GCG  154 (334)
Q Consensus        93 ~~~~~i~l~~~~~--~---~~~~~~v~~al~~~~----~~~~Y-p~~g~~~lr~~lA~~~-~~-----~~~~I~~--t~G  154 (334)
                      ++.++|+|+.|.+  +   ..+++.+.+++.+..    ..+.| +..|..++|+++++++ +.     ++++|++  |+|
T Consensus        28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g  107 (412)
T 1ajs_A           28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG  107 (412)
T ss_dssp             CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence            3567899999984  2   246688988887632    33678 6778999999999998 54     6789999  999


Q ss_pred             HHHHHHHHHH--HhcCCC-----CEEEEcCCCChhHHHHHHHCCCe-EEEeeC--CCCCCCCHHHHHHhccc--CCceEE
Q 019868          155 ADELIDLIMR--CVLDPG-----DKIVDCPPTFTMYEFDAAVNGAA-VVKVPR--KSDFSLNVELIADAVER--EKPKCI  222 (334)
Q Consensus       155 ~~~~i~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~G~~-v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i  222 (334)
                      +++++..+++  .++++|     |+|+++.|+|..|...++..|++ ++.++.  ++++.+|++++++++++  .+++++
T Consensus       108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v  187 (412)
T 1ajs_A          108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFV  187 (412)
T ss_dssp             HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEE
T ss_pred             cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEE
Confidence            9999999964  456899     99999999999999999999999 999986  36688999999998864  256788


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---C--chh-hhcCCCcEEEEcCCchhhcccccch
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RME-WVKKHDNLIVLRTFSKRAGLAGLRV  292 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~--~~~-~~~~~~~~i~i~S~SK~~gl~G~R~  292 (334)
                      ++++||||||.+++.+++++|++.    ++++|+||+|.+|.+.+   .  ... .....+++++++||||.||++|+|+
T Consensus       188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri  267 (412)
T 1ajs_A          188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV  267 (412)
T ss_dssp             EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence            889999999999999988888764    99999999999998653   2  122 2224678999999999999999999


Q ss_pred             heeEc---CHH----HHHHHHH-hcCCCC-CcHHHHHHHHHHhcCch
Q 019868          293 GYGAF---PLS----IIEYLWR-AKQPYN-VSVAAEVAACAALQNPI  330 (334)
Q Consensus       293 G~l~~---~~~----~i~~l~~-~~~~~~-~~~~~q~aa~~~L~~~~  330 (334)
                      ||+++   +++    +++.+.+ ....++ ++.++|.++.++|++.+
T Consensus       268 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  314 (412)
T 1ajs_A          268 GNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPE  314 (412)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHH
T ss_pred             EEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcc
Confidence            99999   887    5555555 334454 69999999999998763

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.5e-33  Score=266.68  Aligned_cols=233  Identities=21%  Similarity=0.283  Sum_probs=194.0

Q ss_pred             CCeeecCCCCCCCC--CCHHHHHHHhc-CcC----CCCCCC-cChHHHHHHHHHhc----C---CCCCCEEEeCCHHHHH
Q 019868           95 EDIVKIDANENPYG--PPPEVREALGQ-LKF----PYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADELI  159 (334)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~-~~~----~~~Yp~-~g~~~lr~~lA~~~----~---~~~~~I~~t~G~~~~i  159 (334)
                      .++|+|+.|.++..  +++.+.+++.+ +..    ...|+. .+..++|+++|+++    |   +++++|++|+|+++++
T Consensus        43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al  122 (425)
T 1vp4_A           43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL  122 (425)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred             CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence            46899999876543  56788888765 221    256754 58899999999999    8   6688999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-------CCceEEE-EeCCCCcc
Q 019868          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIF-LTSPNNPD  231 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------~~~~~i~-l~~p~NPt  231 (334)
                      ..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++++++       .++++|+ +++|+|||
T Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~npt  201 (425)
T 1vp4_A          123 DLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPA  201 (425)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTT
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCC
Confidence            9999999999999999999999999999999999999986544 4899999998864       2688885 68999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      |.+++.+++++|++.    ++++|+||+|.++.+.+.   ....++..+++++++||||.|| +|+|+||+++++++++.
T Consensus       202 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~  280 (425)
T 1vp4_A          202 GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRK  280 (425)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHH
Confidence            999999888877664    899999999999876432   2223344578999999999999 99999999999999998


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          305 LWRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       305 l~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      +......  ++.++++|.++.++|++.
T Consensus       281 l~~~~~~~~~~~~~~~~~a~~~~l~~~  307 (425)
T 1vp4_A          281 IVQAKQSADLCSPAITHRLAARYLERY  307 (425)
T ss_dssp             HHHHHHHHHSSCCHHHHHHHHHHHHHS
T ss_pred             HHHHhhhhcCCCCHHHHHHHHHHHhcC
Confidence            8766544  678999999999999864

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=1.2e-32  Score=265.91  Aligned_cols=238  Identities=20%  Similarity=0.291  Sum_probs=199.2

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcCcC--C------------CCCC-CcChHHHHHHHHHhcC--------CCCCCEE
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------------YIYP-DPESRRLRAALAKDSG--------LESDHIL  150 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------------~~Yp-~~g~~~lr~~lA~~~~--------~~~~~I~  150 (334)
                      +..+|+|+.+++++. .+.+.+++.+...  .            .+|+ ..|..+||++++++++        +++++|+
T Consensus        37 p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~  115 (435)
T 3piu_A           37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV  115 (435)
T ss_dssp             TTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred             CCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEE
Confidence            456899999999887 5677777765311  0            3574 4578999999999987        6789999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCCC--CCCCCHHHHHHhccc-----CCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRKS--DFSLNVELIADAVER-----EKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~~--~~~~d~~~l~~~l~~-----~~~~~i  222 (334)
                      +|+|+++++..++.+++++||+|+++.|+|..+...+. ..|++++.++.++  +|.+|++++++++++     .++++|
T Consensus       116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v  195 (435)
T 3piu_A          116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV  195 (435)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence            99999999999999999999999999999999988877 6899999999643  577999999999863     378999


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc----hhhhcC---------CCcEEEEcCCchhh
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKK---------HDNLIVLRTFSKRA  285 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~----~~~~~~---------~~~~i~i~S~SK~~  285 (334)
                      ++++||||||.+++.+++++|++.    ++++|+||+|.++.+.+..    .....+         .+++++++||||.|
T Consensus       196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~  275 (435)
T 3piu_A          196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  275 (435)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence            999999999999999888888764    9999999999987654321    122222         67899999999999


Q ss_pred             cccccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       286 gl~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      |++|+|+||+++ ++++++.+.+....+..++++|.++.++|++.+|+
T Consensus       276 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  323 (435)
T 3piu_A          276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLT  323 (435)
T ss_dssp             CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHH
T ss_pred             CCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHH
Confidence            999999999999 57788888888777889999999999999987653

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=6.9e-33  Score=264.13  Aligned_cols=234  Identities=23%  Similarity=0.369  Sum_probs=193.9

Q ss_pred             CCeeecCCCCCCCC--CCHHHHHHHhc-Cc----CCCCCCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           95 EDIVKIDANENPYG--PPPEVREALGQ-LK----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~-~~----~~~~Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      +++|+|+.|.++..  +++.+.+++.+ +.    ....|+. .+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~  111 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF  111 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence            46899998875432  56778887765 22    1256754 47899999999999988899999999999999999999


Q ss_pred             cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE-EeCCCCccccCCcHHHHHHHHh
Q 019868          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~-l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                      +++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++++++.++++|+ +++||||||.+++.+++++|++
T Consensus       112 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~  190 (397)
T 2zyj_A          112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ  190 (397)
T ss_dssp             CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence            999999999999999999999999999999986444 48999999999754788885 6799999999999997777765


Q ss_pred             C----CCeEEEccCCcCccCCCC---chhhhcCC---CcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868          246 M----PILVVLDEAYTEFSGLES---RMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (334)
Q Consensus       246 ~----~~~lIvDeay~~~~~~~~---~~~~~~~~---~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~  313 (334)
                      .    ++++|+||+|.++.+.+.   .....+..   +++++++|+||.|| +|+|+||+++++++++.+......  ++
T Consensus       191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~  269 (397)
T 2zyj_A          191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH  269 (397)
T ss_dssp             HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred             HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence            4    999999999999876332   12222223   78999999999999 999999999999999988766544  67


Q ss_pred             CcHHHHHHHHHHhcCch
Q 019868          314 VSVAAEVAACAALQNPI  330 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~~  330 (334)
                      .+.++|.++.++|++.+
T Consensus       270 ~~~~~~~a~~~~l~~~~  286 (397)
T 2zyj_A          270 TPMLNQMLVHELLKEGF  286 (397)
T ss_dssp             CCHHHHHHHHHHHTTTH
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            79999999999999863

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=3.1e-32  Score=259.01  Aligned_cols=236  Identities=14%  Similarity=0.121  Sum_probs=188.9

Q ss_pred             CCCeeecCCCCC---C--CCCCHHHHHHHhcC-c--CCCCCC-CcChHHHHHHHHHhc-CC--CCCCEEE--eCCHHHHH
Q 019868           94 PEDIVKIDANEN---P--YGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS-GL--ESDHILV--GCGADELI  159 (334)
Q Consensus        94 ~~~~i~l~~~~~---~--~~~~~~v~~al~~~-~--~~~~Yp-~~g~~~lr~~lA~~~-~~--~~~~I~~--t~G~~~~i  159 (334)
                      +.++|+|+.|++   .  .++++.+.+++.+. .  ....|+ ..+..++|+++|+++ +.  ++++|++  |+|+++++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~  104 (394)
T 2ay1_A           25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGAL  104 (394)
T ss_dssp             CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHH
T ss_pred             CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHH
Confidence            456899999984   2  35678899888763 1  346784 468899999999997 55  7889999  99999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccC--CceEEEEeCCCCcccc
Q 019868          160 DLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS  233 (334)
Q Consensus       160 ~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~  233 (334)
                      ..+++.+..  +||+|+++.|+|..|...++..|++++.++.+  +++.+|++++++.+++.  +++++++++||||||.
T Consensus       105 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~  184 (394)
T 2ay1_A          105 RQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA  184 (394)
T ss_dssp             HHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence            999987754  99999999999999999999999999999864  56889999999998642  3567777999999999


Q ss_pred             CCcHHHHHHHHhC----CCeEEEccCCcCccCCC--C--chh-hhcCCCcEEEEcCCchhhcccccchheeEc---CHHH
Q 019868          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSI  301 (334)
Q Consensus       234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~--~--~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~---~~~~  301 (334)
                      +++.+++++|++.    ++++|+||+|.+|.+++  .  ... .....+++++++||||.||++|+|+||+++   ++++
T Consensus       185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~  264 (394)
T 2ay1_A          185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT  264 (394)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence            9999988887764    89999999999987642  1  122 222356899999999999999999999998   6665


Q ss_pred             HHH----HHHh-cCCC-CCcHHHHHHHHHHhcCc
Q 019868          302 IEY----LWRA-KQPY-NVSVAAEVAACAALQNP  329 (334)
Q Consensus       302 i~~----l~~~-~~~~-~~~~~~q~aa~~~L~~~  329 (334)
                      ++.    +.+. ...+ +++.++|.++.++|++.
T Consensus       265 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  298 (394)
T 2ay1_A          265 RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTP  298 (394)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcCh
Confidence            443    3322 2334 45899999999999875

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=1.9e-32  Score=264.15  Aligned_cols=228  Identities=21%  Similarity=0.327  Sum_probs=184.8

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCCC-CcChHHHHHHHHHhc----CCCCCCEEEeCCHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELIDL  161 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Yp-~~g~~~lr~~lA~~~----~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.++|+|++|++++++++.+.+++.+ +.      ...+|+ ..+..+||+++++++    ++++++|++|+|+++++..
T Consensus        55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~  134 (432)
T 3ei9_A           55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR  134 (432)
T ss_dssp             TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence            46799999999999999999988765 21      224674 568899999999997    7888999999999999997


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCC------------eEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~------------~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      + ..++++||+|++++|+|..|...++..|.            +++.++.++  ++..|+++      .+++++|++++|
T Consensus       135 l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p  207 (432)
T 3ei9_A          135 L-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSP  207 (432)
T ss_dssp             H-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESS
T ss_pred             H-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCC
Confidence            5 66889999999999999999988887774            567777542  34455332      257899999999


Q ss_pred             CCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh---hhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      |||||.+++.+++++|++.    ++++|+||+|.+|..++....   .....+++++++||||.||++|+|+||++++++
T Consensus       208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~  287 (432)
T 3ei9_A          208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK  287 (432)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence            9999999999999998664    999999999999876432211   112346899999999999999999999999888


Q ss_pred             H--------HHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          301 I--------IEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       301 ~--------i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +        ++.+.+...  .++++.++|.++.++|.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  325 (432)
T 3ei9_A          288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTP  325 (432)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSH
T ss_pred             HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence            7        676665433  356899999999999975

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=3.6e-32  Score=267.91  Aligned_cols=207  Identities=20%  Similarity=0.364  Sum_probs=177.1

Q ss_pred             CCCC-CCcChHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeE
Q 019868          123 PYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAV  194 (334)
Q Consensus       123 ~~~Y-p~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v  194 (334)
                      ...| +..|..++|++++++++      +++++|++|+|+++++..++..++ ++||+|+++.|+|+.|...++..|+++
T Consensus       127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~  206 (500)
T 3tcm_A          127 TGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGAL  206 (500)
T ss_dssp             SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEE
T ss_pred             CCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEE
Confidence            3568 45689999999999873      678999999999999999999998 899999999999999999999999999


Q ss_pred             EEeeCC--CCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC
Q 019868          195 VKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE  263 (334)
Q Consensus       195 ~~v~~~--~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~  263 (334)
                      +.++.+  .+|.+|++++++++++.     ++++|++++||||||.+++.+++++|+++    ++++|+||+|.++.+++
T Consensus       207 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~  286 (500)
T 3tcm_A          207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVD  286 (500)
T ss_dssp             EEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCT
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCC
Confidence            999854  35799999999998742     68999999999999999999999999664    99999999999987632


Q ss_pred             --Cchh------hh---cCCCcEEEEcCCchhh-cccccchheeEc---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHhc
Q 019868          264 --SRME------WV---KKHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       264 --~~~~------~~---~~~~~~i~i~S~SK~~-gl~G~R~G~l~~---~~~~i~~l~~~~~-~~~~~~~~q~aa~~~L~  327 (334)
                        ....      .+   ....++++++||||+| |++|+|+||+++   ++++++.+.+... .++.+.++|.++..+|+
T Consensus       287 ~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~  366 (500)
T 3tcm_A          287 NKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMN  366 (500)
T ss_dssp             TCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred             CCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhc
Confidence              1111      11   2334689999999999 999999999998   8999998887664 47889999999999998


Q ss_pred             Cc
Q 019868          328 NP  329 (334)
Q Consensus       328 ~~  329 (334)
                      ++
T Consensus       367 ~~  368 (500)
T 3tcm_A          367 PP  368 (500)
T ss_dssp             CC
T ss_pred             Cc
Confidence            54

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=2.7e-32  Score=260.67  Aligned_cols=229  Identities=24%  Similarity=0.394  Sum_probs=183.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCC-CCcChHHHHHHHHHh--cC-CCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKD--SG-LESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~lA~~--~~-~~~~~I~~t~G~~~~i~~~  162 (334)
                      +.++|+|+.|++++++++.+.+++.+ +.      ....| +..+..+||+++|++  +| +++++|++|+|+++++..+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~  111 (400)
T 3asa_A           32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL  111 (400)
T ss_dssp             TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred             CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence            46789999999999999998888765 21      13568 456899999999999  57 7889999999999999997


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCe-EEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~-v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      +. ++++||+|+++.|+|..+...++..|++ ++.++.++  ++..|++   + .  +++++|++++||||||.+++.++
T Consensus       112 ~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~---~-~--~~~~~v~l~~p~nptG~~~~~~~  184 (400)
T 3asa_A          112 LS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFP---E-D--THIDILCLCSPNNPTGTVLNKDQ  184 (400)
T ss_dssp             HH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCC---T-T--CCCSEEEEESSCTTTCCCCCHHH
T ss_pred             HH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChh---h-c--cCccEEEEeCCCCCCCCcCCHHH
Confidence            65 5689999999999999999999999998 99998643  3344432   1 1  46899999999999999999998


Q ss_pred             HHHHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHH-------HHH
Q 019868          240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-------IEY  304 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~-------i~~  304 (334)
                      +++|++.    ++++|+||+|.++.+.+.   ....++ ..+++++++||||.||++|+|+||+++++++       ++.
T Consensus       185 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~  264 (400)
T 3asa_A          185 LRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQ  264 (400)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHH
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHH
Confidence            8887764    899999999998875432   122222 1457899999999999999999999998887       665


Q ss_pred             HHHhc--CC-CCCcHHHHHHHHHHhcCc
Q 019868          305 LWRAK--QP-YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       305 l~~~~--~~-~~~~~~~q~aa~~~L~~~  329 (334)
                      +.+..  .. .+++.++|.++.++|++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~  292 (400)
T 3asa_A          265 DWERFLSTTFNGASIPAQEAGVAGLSIL  292 (400)
T ss_dssp             HHHHHHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHhccCccCCChHHHHHHHHHhCcH
Confidence            54322  22 368999999999999764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=7.3e-32  Score=259.45  Aligned_cols=234  Identities=20%  Similarity=0.311  Sum_probs=195.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHh----cC--CCCCCEEEeCCHHHHHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~----~~--~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      +.++|+|+.++++++++|++.+++.+ +. ..+.|+... .+++++++++    ++  +++++|++++|+++++..+++.
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~  138 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN-DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQA  138 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC-HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            56899999999999999999999876 32 235664432 5666666665    45  6788999999999999999999


Q ss_pred             hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      ++++||+|+++.|+|..+...+...|.+++.+|.+   .+|.+|+++++++++++++++|++++|+||||.+++.+++++
T Consensus       139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~  218 (421)
T 3l8a_A          139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK  218 (421)
T ss_dssp             HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred             hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence            99999999999999999999999999999999853   345689999999997568999999999999999999988888


Q ss_pred             HHhC----CCeEEEccCCcCccCCCC---chhhhc--CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhc---
Q 019868          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK---  309 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~~~~~---~~~~~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~---  309 (334)
                      |++.    ++++|+||+|.++.+.+.   ....+.  ..++++++.|+||.||++|+|+||++++ +++++.+....   
T Consensus       219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~  298 (421)
T 3l8a_A          219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN  298 (421)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence            8765    999999999999886442   222221  2478899999999999999999999998 88888887654   


Q ss_pred             CCCCCcHHHHHHHHHHhcC
Q 019868          310 QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~~  328 (334)
                      ..++.+++++.++.++|++
T Consensus       299 ~~~~~n~~~~~a~~aal~~  317 (421)
T 3l8a_A          299 NQHEVPTVGMIATQAAFQY  317 (421)
T ss_dssp             TCSCCCHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHhc
Confidence            3357899999999999874

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-31  Score=256.61  Aligned_cols=238  Identities=18%  Similarity=0.214  Sum_probs=189.6

Q ss_pred             CCCCeeecCCCCC-CC----CCCHHHHHHHhc-Cc---CCCCC-CCcChHHHHHHHHHhc-C-----CCCCCEEE--eCC
Q 019868           93 KPEDIVKIDANEN-PY----GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDS-G-----LESDHILV--GCG  154 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~----~~~~~v~~al~~-~~---~~~~Y-p~~g~~~lr~~lA~~~-~-----~~~~~I~~--t~G  154 (334)
                      .+.++|+|+.|.+ ++    .+++.+.+++.+ ..   ..+.| +..|..++|+++++++ +     +++++|++  |+|
T Consensus        27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g  106 (412)
T 1yaa_A           27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS  106 (412)
T ss_dssp             CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence            3467899999974 22    467889888776 42   23568 6678999999999998 4     36889999  999


Q ss_pred             HHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-C-CCCCCCHHHHHHhcccC--CceEEEEeCCC
Q 019868          155 ADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVERE--KPKCIFLTSPN  228 (334)
Q Consensus       155 ~~~~i~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~-~~~~~d~~~l~~~l~~~--~~~~i~l~~p~  228 (334)
                      +++++..++  ..++++||+|+++.|+|..|...++..|++++.++. + +++.+|++++++++++.  +..++++++||
T Consensus       107 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~  186 (412)
T 1yaa_A          107 GTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH  186 (412)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred             hHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            999999884  344579999999999999999999999999999986 3 36889999999998643  23445558999


Q ss_pred             CccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---C--ch-hhhcCCC---cEEEEcCCchhhcccccchhee
Q 019868          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RM-EWVKKHD---NLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       229 NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~--~~-~~~~~~~---~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      ||||.+++.+++++|++.    ++++|+||+|.+|.+++   .  .. ......+   ++++++||||.||++|+|+||+
T Consensus       187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~  266 (412)
T 1yaa_A          187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF  266 (412)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence            999999999988888764    89999999999987653   1  12 2222344   8999999999999889999999


Q ss_pred             E--c-----CHH----HHHHHHHh-cCCC-CCcHHHHHHHHHHhcCch
Q 019868          296 A--F-----PLS----IIEYLWRA-KQPY-NVSVAAEVAACAALQNPI  330 (334)
Q Consensus       296 ~--~-----~~~----~i~~l~~~-~~~~-~~~~~~q~aa~~~L~~~~  330 (334)
                      +  +     +++    +++.+.+. ...+ +++.++|.++.++|++.+
T Consensus       267 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~  314 (412)
T 1yaa_A          267 HLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPE  314 (412)
T ss_dssp             EEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHH
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHH
Confidence            8  7     566    78877763 3334 568999999999998863

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.98  E-value=2.7e-32  Score=262.81  Aligned_cols=231  Identities=15%  Similarity=0.142  Sum_probs=191.3

Q ss_pred             CeeecCCCCCCCCC---CHHHHHHH--hc-Cc----CCCCCCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHH--HHH
Q 019868           96 DIVKIDANENPYGP---PPEVREAL--GQ-LK----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELI--DLI  162 (334)
Q Consensus        96 ~~i~l~~~~~~~~~---~~~v~~al--~~-~~----~~~~Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i--~~~  162 (334)
                      ..|+|+.|.++...   ++.+.+++  .+ +.    ....|++ .|..+||+++|+++++++++|++|+|+++++  ..+
T Consensus        34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  113 (427)
T 3ppl_A           34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI  113 (427)
T ss_dssp             CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence            46999999887542   23466665  43 21    2367865 5899999999999999999999999999999  588


Q ss_pred             HHHhcC--C----------CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCC
Q 019868          163 MRCVLD--P----------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNN  229 (334)
Q Consensus       163 ~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~N  229 (334)
                      +.++++  +          ||+|++++|+|..|...++..|++++.+|.+++ ++|+++++++++..++++|+++ +|||
T Consensus       114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~N  192 (427)
T 3ppl_A          114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSN  192 (427)
T ss_dssp             HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCT
T ss_pred             HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCC
Confidence            888877  6          899999999999999999999999999996554 5999999999965688999877 8899


Q ss_pred             ccccCCcHHHHHHHHh----C-CCeEEEccCCcCccCCCC---chhhh------cCCCcEEEEcCCchhhcccccchhee
Q 019868          230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLES---RMEWV------KKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~----~-~~~lIvDeay~~~~~~~~---~~~~~------~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      |||.+++.+++++|++    . ++++|+||+|.++.+.+.   .....      +..+++++++||||. +++|+|+||+
T Consensus       193 PtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~  271 (427)
T 3ppl_A          193 PTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFF  271 (427)
T ss_dssp             TTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEE
T ss_pred             CCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEE
Confidence            9999999997777764    3 899999999999654321   11221      256899999999998 7899999999


Q ss_pred             EcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       296 ~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++++++.+.+...  .++++.+.|.++.++|++
T Consensus       272 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  306 (427)
T 3ppl_A          272 LTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGD  306 (427)
T ss_dssp             ECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred             EcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence            999999999887765  378999999999999998

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.96  E-value=2.6e-34  Score=273.77  Aligned_cols=236  Identities=19%  Similarity=0.280  Sum_probs=197.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      ++++|+.+++++++++++.+++.+ +. ....|++. ..++|+++++++    +  +++++|++|+|+++++..++++++
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~  110 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT  110 (392)
Confidence            789999999999999999999876 32 23667665 789999999976    4  568899999999999999999999


Q ss_pred             CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-C--CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      ++||+|+++.|+|..+...++..|++++.++.+ +  +|.+|++++++.+++.++++|++++||||||.+++.+++++|+
T Consensus       111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~  190 (392)
T 3b1d_A          111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG  190 (392)
Confidence            999999999999999999988899999998853 2  3669999999998745789999999999999999988887777


Q ss_pred             hC----CCeEEEccCCcCccCCCC---chhhhcC--CCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCCC--
Q 019868          245 EM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY--  312 (334)
Q Consensus       245 ~~----~~~lIvDeay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~~--  312 (334)
                      +.    ++++|+||+|.++.+.+.   ....+..  .+++++++||||.||++|+|+||+++++ ++++.+.+....+  
T Consensus       191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  270 (392)
T 3b1d_A          191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNH  270 (392)
Confidence            64    899999999999886432   1111222  6789999999999999999999999975 5888888777665  


Q ss_pred             -CCcHHHHHHHHHHhcC-chhh
Q 019868          313 -NVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       313 -~~~~~~q~aa~~~L~~-~~~~  332 (334)
                       +++.++|.++.++|++ .+++
T Consensus       271 ~~~~~~~~~a~~~~l~~~~~~~  292 (392)
T 3b1d_A          271 HEVSSLGYIATETAYRYGKPWL  292 (392)
Confidence             5688999999999986 3443

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.97  E-value=4.6e-32  Score=267.05  Aligned_cols=205  Identities=20%  Similarity=0.287  Sum_probs=171.7

Q ss_pred             CCCC-CcChHHHHHHHHHhc-----CC--CCCCEEEeCCHHHHHHHHHHHhcCCCC----EEEEcCCCChhHHHHHHHCC
Q 019868          124 YIYP-DPESRRLRAALAKDS-----GL--ESDHILVGCGADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNG  191 (334)
Q Consensus       124 ~~Yp-~~g~~~lr~~lA~~~-----~~--~~~~I~~t~G~~~~i~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~G  191 (334)
                      ..|+ ..|..++|+++++++     |+  ++++|++|+|+++++..++.+++++||    +|+++.|+|+.|...++..|
T Consensus       123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g  202 (498)
T 3ihj_A          123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELD  202 (498)
T ss_dssp             -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcC
Confidence            5685 458999999999987     34  688999999999999999999998875    99999999999999999999


Q ss_pred             CeEEEeeCC--CCCCCCHHHHHHhcccC----CceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccC
Q 019868          192 AAVVKVPRK--SDFSLNVELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSG  261 (334)
Q Consensus       192 ~~v~~v~~~--~~~~~d~~~l~~~l~~~----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~  261 (334)
                      ++++.++.+  .+|.+|++++++++++.    ++++|++++||||||.+++.+++++|+++    +++||+||+|.++.+
T Consensus       203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~  282 (498)
T 3ihj_A          203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY  282 (498)
T ss_dssp             CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence            999999854  36899999999998742    58999999999999999999999888875    999999999999886


Q ss_pred             CCC--c--hh-hhc-------CCCcEEEEcCCchhh-cccccchheeE---cCHHHHHHHHHhcCC-CCCcHHHHHHHHH
Q 019868          262 LES--R--ME-WVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQP-YNVSVAAEVAACA  324 (334)
Q Consensus       262 ~~~--~--~~-~~~-------~~~~~i~i~S~SK~~-gl~G~R~G~l~---~~~~~i~~l~~~~~~-~~~~~~~q~aa~~  324 (334)
                      ++.  .  .. ...       ...++++++||||.| |++|+|+||++   .++++++.+.+.... ++.+.++|.++..
T Consensus       283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~  362 (498)
T 3ihj_A          283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI  362 (498)
T ss_dssp             CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence            431  1  11 111       234589999999999 89999999998   589999988776544 6789999999999


Q ss_pred             HhcC
Q 019868          325 ALQN  328 (334)
Q Consensus       325 ~L~~  328 (334)
                      ++++
T Consensus       363 ~l~~  366 (498)
T 3ihj_A          363 VVNP  366 (498)
T ss_dssp             HTCC
T ss_pred             HhcC
Confidence            9975

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.97  E-value=6.7e-32  Score=259.43  Aligned_cols=231  Identities=16%  Similarity=0.176  Sum_probs=193.0

Q ss_pred             CeeecCCCCCC---CCCCHHHHHHHh--cC-c---CCCCC-CC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH--HH
Q 019868           96 DIVKIDANENP---YGPPPEVREALG--QL-K---FPYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELID--LI  162 (334)
Q Consensus        96 ~~i~l~~~~~~---~~~~~~v~~al~--~~-~---~~~~Y-p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~--~~  162 (334)
                      +.|+|+.|.++   ++.++.+.+++.  +. .   ....| +. .|.++||+++|+++++++++|++|+|+++++.  .+
T Consensus        26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  105 (423)
T 3ez1_A           26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL  105 (423)
T ss_dssp             CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence            46999999998   788888888875  32 2   12678 43 57899999999999999999999999999998  88


Q ss_pred             HHHhcC--C---------CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc-cCCceEEEEe-CCCC
Q 019868          163 MRCVLD--P---------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNN  229 (334)
Q Consensus       163 ~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~~i~l~-~p~N  229 (334)
                      ++++++  +         ||+|+++.|+|..|...++..|++++.++.+++ ++|+++++++++ .+++++|++. +|||
T Consensus       106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~N  184 (423)
T 3ez1_A          106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSN  184 (423)
T ss_dssp             HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCT
T ss_pred             HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCC
Confidence            888887  8         599999999999999999999999999996544 699999999995 3678999865 8999


Q ss_pred             ccccCCcHHHHHHHHh----C-CCeEEEccCCcCccCCC----Cc---hhh---hcCCCcEEEEcCCchhhcccccchhe
Q 019868          230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLE----SR---MEW---VKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~----~-~~~lIvDeay~~~~~~~----~~---~~~---~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      |||.+++.+++++|++    . ++++|+||+|..+.+..    ..   ...   .+..+++++++||||. +++|+|+||
T Consensus       185 PtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~  263 (423)
T 3ez1_A          185 PGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGF  263 (423)
T ss_dssp             TTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEE
T ss_pred             CCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEE
Confidence            9999999998887765    2 89999999999644321    11   111   1356899999999998 679999999


Q ss_pred             eEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       295 l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++++.+.+...  .++++.+.|.++.++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  299 (423)
T 3ez1_A          264 VASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE  299 (423)
T ss_dssp             EEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred             EEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence            9999999999887664  378899999999999987

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.97  E-value=4.2e-31  Score=249.59  Aligned_cols=213  Identities=21%  Similarity=0.301  Sum_probs=180.0

Q ss_pred             HHHHHHhcCcCCCCC-CCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH
Q 019868          112 EVREALGQLKFPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV  189 (334)
Q Consensus       112 ~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~  189 (334)
                      ++.+++...  ...| +..|..+||+++++++ ++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++.
T Consensus        47 ~~~~~~~~~--~~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~  124 (375)
T 3op7_A           47 DFYKKLQGT--KLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKS  124 (375)
T ss_dssp             HHHHHHHTS--CCSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHH
T ss_pred             HHHHHHhcC--CcCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHH
Confidence            444444432  2446 5668999999999998 57889999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH---hC-CCeEEEccCCcCccCCC
Q 019868          190 NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL---EM-PILVVLDEAYTEFSGLE  263 (334)
Q Consensus       190 ~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~---~~-~~~lIvDeay~~~~~~~  263 (334)
                      .|++++.++.+  ++|.+|+++++++++ +++++|++++||||||.+++.+++++|+   +. ++++|+||+|.++... 
T Consensus       125 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-  202 (375)
T 3op7_A          125 LGAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-  202 (375)
T ss_dssp             TTCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-
T ss_pred             cCCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-
Confidence            99999999853  456789999999997 6899999999999999999966555554   44 9999999999998865 


Q ss_pred             CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       264 ~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .........+++++++||||.+|++|+|+||+++++++++.+.+....  ++.+.+.|.++..+|++
T Consensus       203 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  269 (375)
T 3op7_A          203 DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAH  269 (375)
T ss_dssp             CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT
T ss_pred             CCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc
Confidence            222233446789999999999999999999999999999998876654  56789999999999886

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.97  E-value=3e-32  Score=260.26  Aligned_cols=218  Identities=21%  Similarity=0.272  Sum_probs=175.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-C--c---CCCCCCC-cCh-----HHHHHHHHHhcC-----CCC-CCEEEeCC
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-L--K---FPYIYPD-PES-----RRLRAALAKDSG-----LES-DHILVGCG  154 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~---~~~~Yp~-~g~-----~~lr~~lA~~~~-----~~~-~~I~~t~G  154 (334)
                      .+.++|+|+.|++++++++.+.+++.+ .  .   ...+|++ .|.     ++||+++|++++     +++ ++|++|+|
T Consensus        20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G   99 (391)
T 3bwn_A           20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG   99 (391)
T ss_dssp             TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred             CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence            456789999999998777777777633 1  1   2356854 477     999999999985     245 69999999


Q ss_pred             HHHHHHHHHHHhcCCCC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          155 ADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       155 ~~~~i~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +++++.+++.+++++||    +|++++|+|..|...++..|++++.++.+.+ .++         .+++++|++++||||
T Consensus       100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~k~v~l~~p~NP  169 (391)
T 3bwn_A          100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD---------KKGPYIELVTSPNNP  169 (391)
T ss_dssp             HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC---------CCSCEEEEEESSCTT
T ss_pred             hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC---------CCCCEEEEECCCCCC
Confidence            99999999999999999    9999999999999999999999988885322 222         257899999999999


Q ss_pred             cccCCcHHHHHHHHhC--C--CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHH
Q 019868          231 DGSIINDEDLLKILEM--P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL  305 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~--~--~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l  305 (334)
                      ||.+++  +   |++.  +  ++||+||+|.+  .......  ...+++++++||||.||++|+|+||+++ ++++++.+
T Consensus       170 tG~~~~--~---l~~~~~~~~~~ii~De~y~~--~~~~~l~--~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l  240 (391)
T 3bwn_A          170 DGTIRE--T---VVNRPDDDEAKVIHDFAYYW--PHYTPIT--RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKM  240 (391)
T ss_dssp             TCCCCC--C---CC-----CCCEEEEECTTCS--TTTSCCC--CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHH
T ss_pred             CchhHH--H---HHHHhhcCCCEEEEeCCCCC--CCCCccc--cCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHH
Confidence            999997  3   3433  4  99999999984  1111111  2457899999999999999999999997 89999999


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHhcCc
Q 019868          306 WRAKQ--PYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       306 ~~~~~--~~~~~~~~q~aa~~~L~~~  329 (334)
                      .+.+.  .++++.++|.++.++|++.
T Consensus       241 ~~~~~~~~~~~~~~~q~a~~~~l~~~  266 (391)
T 3bwn_A          241 VEYIIVNSIGVSKESQVRTAKILNVL  266 (391)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcccccCCCHHHHHHHHHHHhCc
Confidence            88776  3789999999999999863

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.97  E-value=2.3e-31  Score=264.74  Aligned_cols=207  Identities=17%  Similarity=0.255  Sum_probs=165.9

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCc-ChHHHHHHHHHhc-------CC---CCCCEEEeCCHHHHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GL---ESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~-g~~~lr~~lA~~~-------~~---~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      +|+|++|++.+++ +.+.+++.+......||++ |..++|+++++.+       ++   ++++|++|+|+++++..++.+
T Consensus       106 ~i~l~~g~~~~~~-~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~  184 (546)
T 2zy4_A          106 SLSYVRDQLGLDP-AAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES  184 (546)
T ss_dssp             HHHHHHHTSCCCH-HHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred             hhecccCCCCCCC-hHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence            6899999988754 5565565542123679765 7889999987754       22   358999999999999999987


Q ss_pred             -----hcCCCCEEEEcCCCChhHHHHHHH--CCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          166 -----VLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       166 -----l~~~gd~Vl~~~p~y~~~~~~~~~--~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                           ++++||+|++++|+|+.|...+..  .|++++.++.+  .+|.+|++++++.+. .++++|++++||||||.+++
T Consensus       185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~  263 (546)
T 2zy4_A          185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMD  263 (546)
T ss_dssp             HHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCC
T ss_pred             hhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCC
Confidence                 478999999999999999987665  46889998853  457799999998875 68999999999999999999


Q ss_pred             HHHHHHHHh-----C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH-HHHHHH
Q 019868          237 DEDLLKILE-----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLW  306 (334)
Q Consensus       237 ~~~l~~l~~-----~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-~i~~l~  306 (334)
                      .+++++|++     . +++||+||+|.+|.++....... ..+++++++||||.||++|+|+||++++++ +++.+.
T Consensus       264 ~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~  339 (546)
T 2zy4_A          264 QRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLAL  339 (546)
T ss_dssp             HHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHH
Confidence            988877653     3 89999999999988643222222 236899999999999999999999999775 777763

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.97  E-value=5.1e-31  Score=252.25  Aligned_cols=234  Identities=19%  Similarity=0.217  Sum_probs=178.8

Q ss_pred             CCeeecCCCCCCCCCC--HHHHHHHhcC-cC------CCCCC-CcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868           95 EDIVKIDANENPYGPP--PEVREALGQL-KF------PYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~~------~~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~  158 (334)
                      .++|+|+.|.++..++  +.+.+++.+. ..      ...|+ ..|..+||+++|+++      ++++++|++|+|++++
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a  110 (417)
T 3g7q_A           31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA  110 (417)
T ss_dssp             -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence            5789999998877433  4556666542 11      13684 558999999999997      5788999999999999


Q ss_pred             HHHHHHHhcCCCC-----EEEEc-CCCChhHHHHHHH------CCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEe
Q 019868          159 IDLIMRCVLDPGD-----KIVDC-PPTFTMYEFDAAV------NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       159 i~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~------~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +..+++.++++||     +|+++ +|+|..|...+..      .+..+..++.+ .++.+|+++++  +. +++++|+++
T Consensus       111 l~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~  187 (417)
T 3g7q_A          111 FFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVS  187 (417)
T ss_dssp             HHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEE
T ss_pred             HHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-cCceEEEEC
Confidence            9999999999987     89997 9999988776532      34455555532 24678988887  54 689999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh-hhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||||||.+++.+++++|++.    ++++|+||+|..+........ .....+++++++|||| ++++|+|+||++++++
T Consensus       188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~  266 (417)
T 3g7q_A          188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDK  266 (417)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHH
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHH
Confidence            999999999998888887664    999999999986442211111 1123578999999999 7899999999999999


Q ss_pred             HHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868          301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       301 ~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +++.+......  ++.++++|.++.++|++.+|.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  300 (417)
T 3g7q_A          267 TITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL  300 (417)
T ss_dssp             HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchH
Confidence            99998876654  668899999999999886553

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.97  E-value=1.9e-31  Score=264.66  Aligned_cols=202  Identities=20%  Similarity=0.220  Sum_probs=166.2

Q ss_pred             CeeecCCCCCCCCCCHHHHHH-HhcCcCCCCC-CCcChHHHHHHHHHhc-----C-CC---CCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREA-LGQLKFPYIY-PDPESRRLRAALAKDS-----G-LE---SDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~a-l~~~~~~~~Y-p~~g~~~lr~~lA~~~-----~-~~---~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++|+|+.|++++++ ++++++ ...+.....| |..|..++|+++++++     + +.   +++|++|+|+++++..++.
T Consensus       104 ~~i~l~~g~~~~~~-~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~  182 (533)
T 3f6t_A          104 DAVNYCHTELGLNR-DKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH  182 (533)
T ss_dssp             HHHHHHHHTTCCCH-HHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred             hheeccCCCCCcCC-cHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence            46889999988864 555444 4444332333 5568999999999987     2 22   3699999999999999999


Q ss_pred             H-----hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC----CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~----~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      +     ++++||+|+++.|+|..|...++..|++++.++.    ++++.+|+++++++++ +++++|++++||||||.++
T Consensus       183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-~~~k~v~l~~p~NPtG~~~  261 (533)
T 3f6t_A          183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEF  261 (533)
T ss_dssp             HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-TTEEEEEEESSCTTTCBCC
T ss_pred             HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-CCCeEEEEeCCCCCCcccc
Confidence            8     7899999999999999999988889999999885    3568899999999997 6899999999999999999


Q ss_pred             cHHHHHHHHh----C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          236 NDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       236 ~~~~l~~l~~----~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +.+++++|++    . ++++|+||+|.+|.++....... ..+++++++||||.||++|+|+||++++++
T Consensus       262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~  330 (533)
T 3f6t_A          262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNEK  330 (533)
T ss_dssp             CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred             CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECcH
Confidence            9997777665    5 89999999999988654333222 347899999999999999999999999765

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.97  E-value=1.7e-30  Score=251.19  Aligned_cols=235  Identities=18%  Similarity=0.182  Sum_probs=185.7

Q ss_pred             CCee-ecCCCCCCCCCC--HHHHHHHhcC-cC-------C------CCCC-CcChHHHHHHHHHhc------CCCCCCEE
Q 019868           95 EDIV-KIDANENPYGPP--PEVREALGQL-KF-------P------YIYP-DPESRRLRAALAKDS------GLESDHIL  150 (334)
Q Consensus        95 ~~~i-~l~~~~~~~~~~--~~v~~al~~~-~~-------~------~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~  150 (334)
                      .++| +|+.+.++..++  +.+.+++.+. ..       .      ..|+ ..|.++||+++|+++      ++++++|+
T Consensus        31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~  110 (444)
T 3if2_A           31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA  110 (444)
T ss_dssp             SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred             chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence            4689 999998877433  3455555542 22       1      4584 457899999999998      67889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCC--------------EEEEc-CCCChhHHHH------HHHCCCeEEEeeCCC-----CCC
Q 019868          151 VGCGADELIDLIMRCVLDPGD--------------KIVDC-PPTFTMYEFD------AAVNGAAVVKVPRKS-----DFS  204 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~------~~~~G~~v~~v~~~~-----~~~  204 (334)
                      +|+|+++++..++++++++||              +|+++ .|+|..|...      ....|..++.++.+.     ++.
T Consensus       111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  190 (444)
T 3if2_A          111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYR  190 (444)
T ss_dssp             EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEE
T ss_pred             EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccC
Confidence            999999999999999999988              78876 9999988763      234688888888543     357


Q ss_pred             CCHHHHHHh---cccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh-hhcCCCcEE
Q 019868          205 LNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLI  276 (334)
Q Consensus       205 ~d~~~l~~~---l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~-~~~~~~~~i  276 (334)
                      +|+++++++   +. +++++|++++||||||.+++.+++++|+++    ++++|+||+|..+........ .....++++
T Consensus       191 ~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i  269 (444)
T 3if2_A          191 VDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTI  269 (444)
T ss_dssp             CCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred             CCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEE
Confidence            999999998   44 689999999999999999998887777653    999999999986432111111 112357899


Q ss_pred             EEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchh
Q 019868          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +++||||. +++|+|+||+++++++++.+......  ++.+++.|.++.+++++.++
T Consensus       270 ~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  325 (444)
T 3if2_A          270 LCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRI  325 (444)
T ss_dssp             EEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH
T ss_pred             EEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCch
Confidence            99999996 88999999999999999988876654  67899999999999988654

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.96  E-value=4.5e-31  Score=255.10  Aligned_cols=218  Identities=17%  Similarity=0.169  Sum_probs=179.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-C-cC-CCC--CCC-c-C---hHHHHHHHHHhcC------CCCCCEEEeCCHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-L-KF-PYI--YPD-P-E---SRRLRAALAKDSG------LESDHILVGCGADE  157 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~-~~~--Yp~-~-g---~~~lr~~lA~~~~------~~~~~I~~t~G~~~  157 (334)
                      +..+|+|+.|++++++++.+.+++.+ + .. ...  |++ . |   ..+||+++|++++      +++++|++|+|+++
T Consensus        55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~  134 (427)
T 2hox_A           55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ  134 (427)
T ss_dssp             TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred             CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence            45679999999999887888877764 3 12 233  854 4 6   8999999999985      67899999999999


Q ss_pred             HHHHHHHHh--------cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       158 ~i~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      ++.+++.++        +++||+|+++.|+|+.|...++..|++++.+      .+|++.++++++ +++|+|++++|||
T Consensus       135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~-~~~k~v~l~~p~N  207 (427)
T 2hox_A          135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW------AGNAANYVNVSN-PEQYIEMVTSPNN  207 (427)
T ss_dssp             HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE------EEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred             HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee------cCCHHHHHHhhc-CCceEEEEcCCCC
Confidence            999999999        8999999999999999999999999987743      467788888886 5789999999999


Q ss_pred             ccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHh
Q 019868          230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~  308 (334)
                      |||.+++ +.+    + ++..|.|+.|.+  ...+... +. .+++++++||||.||++|+|+||+++ ++++++.+.+.
T Consensus       208 PtG~~~~-~~l----~-~~~~i~d~~~~~--~~~s~~~-~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~  277 (427)
T 2hox_A          208 PEGLLRH-AVI----K-GCKSIYDMVYYW--PHYTPIK-YK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY  277 (427)
T ss_dssp             TTCCCCC-CSS----T-TCEEEEECTTCS--TTTSCCC-SC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred             CcccccH-HHH----c-CCCEEEeecccC--CCCCccc-cC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH
Confidence            9999999 432    2 567888888753  1111111 12 57899999999999999999999999 58999999887


Q ss_pred             cCC--CCCcHHHHHHHHHHhcC
Q 019868          309 KQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 ~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +..  ++++.++|.++..+|++
T Consensus       278 ~~~~~~~~~~~~q~a~~~~L~~  299 (427)
T 2hox_A          278 MTKNTEGTPRETQLRSLKVLKE  299 (427)
T ss_dssp             HHHHTSSCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCHHHHHHHHHHhhc
Confidence            654  67999999999999986

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.96  E-value=1.6e-28  Score=235.45  Aligned_cols=219  Identities=15%  Similarity=0.080  Sum_probs=181.4

Q ss_pred             eecCCCCCCCCCCHHHHH----HHh---cCcCCCCCCCcCh---HHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           98 VKIDANENPYGPPPEVRE----ALG---QLKFPYIYPDPES---RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~----al~---~~~~~~~Yp~~g~---~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      ..++++++++.+++.+.+    ++.   .-...+.|+..+.   .++|+++++++|.+  ++++++|+++++..++.+++
T Consensus        21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~   98 (404)
T 1e5e_A           21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL   98 (404)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh
Confidence            568889999987755443    332   1122356755444   48999999999974  67788888899999999999


Q ss_pred             CCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          168 DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      ++||+|++++|.|+.+..    .++..|++++.++.+     |+++++++++ +++++|++++|+||||.+++.+++.++
T Consensus        99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~t~~v~l~~p~NptG~v~~l~~i~~l  172 (404)
T 1e5e_A           99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKD  172 (404)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-CCCcEEEEECCCCCCCcccCHHHHHHH
Confidence            999999999999998887    678899999999864     7789999997 689999999999999999999999999


Q ss_pred             HhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccch-heeEcCHHHHH-HHHHhcCCC---CCcH
Q 019868          244 LEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQPY---NVSV  316 (334)
Q Consensus       244 ~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~-G~l~~~~~~i~-~l~~~~~~~---~~~~  316 (334)
                      ++.  ++++|+||+|..+.... +.    ..+++++++|+||.|+++|+|+ ||+++++++++ .+.+....+   ++++
T Consensus       173 a~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~  247 (404)
T 1e5e_A          173 AHSQEGVLVIADNTFCSPMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISP  247 (404)
T ss_dssp             HHTSTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred             HHhhcCCEEEEECCCchhhhCC-cc----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence            975  89999999999877532 22    2367899999999999999998 99999999988 888776655   5789


Q ss_pred             HHHHHHHHHhcCc
Q 019868          317 AAEVAACAALQNP  329 (334)
Q Consensus       317 ~~q~aa~~~L~~~  329 (334)
                      +.|.++.++|++.
T Consensus       248 ~~~~~~~~~l~~~  260 (404)
T 1e5e_A          248 HDAWLITRGLSTL  260 (404)
T ss_dssp             HHHHHHHHHHTTH
T ss_pred             HHHHHHHHhHhHH
Confidence            9999999999863

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.96  E-value=1.6e-28  Score=230.93  Aligned_cols=226  Identities=18%  Similarity=0.134  Sum_probs=181.2

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-cCC----------CCC-CCcChHHHHHH-HHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-KFP----------YIY-PDPESRRLRAA-LAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~----------~~Y-p~~g~~~lr~~-lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +++++|+.+.+..++++.+.+++.+. ...          ..| +..+..++|++ ++++++.+  +|++|+|+++++..
T Consensus         7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~   84 (371)
T 2e7j_A            7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFA   84 (371)
T ss_dssp             -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHH
T ss_pred             CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHH
Confidence            45789988777777889999998763 211          122 56678999999 99999987  99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhccc----CCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~----~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++.+++++||+|++++|+|..+...++..|++++.++  .++++.+|++++++++++    +++++|++++|+||||.++
T Consensus        85 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~  164 (371)
T 2e7j_A           85 VMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP  164 (371)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC
Confidence            9999999999999999999999988999999999999  777789999999999863    4789999999999999999


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH-HHHhcC---
Q 019868          236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQ---  310 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~-l~~~~~---  310 (334)
                      +.+++.++++. ++++|+||+|..+......    ...+..++++|+||.++. |.|+||+++++++++. +.....   
T Consensus       165 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~di~~~s~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~  239 (371)
T 2e7j_A          165 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVSL----KEIGADFIVGSGHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYKN  239 (371)
T ss_dssp             CHHHHHHHHHTTTCCEEEECTTTBTTBCCCH----HHHTCSEEEEEHHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred             CHHHHHHHHHHcCCeEEEECccccCCCCCCh----hhcCCCEEEecCCcCCCC-CCCcEEEEEechhhhhhccccccCcc
Confidence            99999999998 9999999999986542121    122345999999999884 4599999999988777 655443   


Q ss_pred             ------CCCCcHHHHHHHHHHhc
Q 019868          311 ------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       311 ------~~~~~~~~q~aa~~~L~  327 (334)
                            .++.+...+.++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~a~~~~l~  262 (371)
T 2e7j_A          240 KEVELLGCTARGATIITLMASFP  262 (371)
T ss_dssp             SBGGGTTCCCCSHHHHHHHHHHH
T ss_pred             cccccccCCcCHHHHHHHHHHHH
Confidence                  34455565555555543

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=9.5e-28  Score=229.13  Aligned_cols=207  Identities=19%  Similarity=0.162  Sum_probs=173.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC--------CCCCCC---cChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF--------PYIYPD---PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~--------~~~Yp~---~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~  161 (334)
                      +++|+|+.++++ ++|+.+.+++.+ +..        .+.|+.   .+..++|++++++++. ++++|++|+|+++++..
T Consensus        27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  105 (420)
T 1t3i_A           27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL  105 (420)
T ss_dssp             EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence            457999999988 677888888765 211        123542   4678999999999998 78899999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++.++    +++||+|+++.|+|..    +...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.
T Consensus       106 ~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  184 (420)
T 1t3i_A          106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLGC  184 (420)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTCB
T ss_pred             HHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC-CCceEEEEeCCcccccC
Confidence            99999    8999999999999987    566777789999999987778899999999997 68999999999999999


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++.+++.++++. ++++|+||+|..+.....    +...+.++++.|+||.+|.+|  +||+++++++++.+....
T Consensus       185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~  255 (420)
T 1t3i_A          185 VNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD----VQLIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFF  255 (420)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCS
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhccCCccCc----hhhcCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCcee
Confidence            9999999999987 999999999986543211    112246799999999888777  999999999988876544

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.95  E-value=7.6e-28  Score=226.93  Aligned_cols=223  Identities=21%  Similarity=0.213  Sum_probs=177.0

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-CcCCC-------C--C-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LKFPY-------I--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~-------~--Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      +.|+.+.+. ++++++++++.+ +...+       .  | +..+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus         3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~   81 (384)
T 1eg5_A            3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (384)
T ss_dssp             EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence            567777766 677889888876 32211       0  1 1224578999999999998899999999999999999998


Q ss_pred             c----CCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          167 L----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      .    ++||+|+++.|+|+.+...+   +..|++++.++.++++.+|+++++++++ +++++|++++|+||||.+++.++
T Consensus        82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  160 (384)
T 1eg5_A           82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (384)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-CCCeEEEEECCCCCcccccCHHH
Confidence            7    79999999999999876655   6789999999977778899999999997 58999999999999999999999


Q ss_pred             HHHHHhC-C--CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH--HHHHHHh-----c
Q 019868          240 LLKILEM-P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--IEYLWRA-----K  309 (334)
Q Consensus       240 l~~l~~~-~--~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~--i~~l~~~-----~  309 (334)
                      +.++++. +  +++|+||+|. +...+  .. +...+.++++.|+||.+|++|  +||+++++++  ...+...     .
T Consensus       161 i~~l~~~~~~~~~li~Dea~~-~~~~~--~~-~~~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~  234 (384)
T 1eg5_A          161 VTRIVKKKNKETLVHVDAVQT-IGKIP--FS-LEKLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGL  234 (384)
T ss_dssp             HHHHHHHHCTTCEEEEECTTT-TTTSC--CC-CTTTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTT
T ss_pred             HHHHHHhcCCceEEEEEhhhh-cCCcc--cC-chhcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccc
Confidence            9999987 8  9999999997 22111  11 222356799999999999888  7999998875  2222111     1


Q ss_pred             CCCCCcHHHHHHHHHHhcC
Q 019868          310 QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~~  328 (334)
                      ..++++.+.|.++.++|++
T Consensus       235 ~~~~~~~~~~~a~~~al~~  253 (384)
T 1eg5_A          235 RSGTQNVPGIVGAARAMEI  253 (384)
T ss_dssp             BCSCCCHHHHHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHH
Confidence            2357889999988888875

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.95  E-value=2.4e-27  Score=224.96  Aligned_cols=220  Identities=15%  Similarity=0.136  Sum_probs=181.7

Q ss_pred             CCCCCCCCHHHHHHHhcCcCCCCCCCc---ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          103 NENPYGPPPEVREALGQLKFPYIYPDP---ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Yp~~---g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      +.++.++++++.+++.+... ..|+..   ...++++.+++++|++++ +|++|+|+++++..++.+++++||+|++++|
T Consensus        39 ~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~  117 (393)
T 1vjo_A           39 GPGPSNAHPSVLQAMNVSPV-GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVA  117 (393)
T ss_dssp             SSSCCCCCHHHHHHHSSCCC-CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             cCCCCCCCHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcC
Confidence            34566788999999987432 246432   246788888888999888 9999999999999999999999999999999


Q ss_pred             CChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      +|..  +...++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+.+.+++.++++. ++++|+||+
T Consensus       118 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea  197 (393)
T 1vjo_A          118 GYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV  197 (393)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred             ChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence            9998  8888899999999999777778999999999973278999999999999999999999999988 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh---------------------cCCC-C
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------------KQPY-N  313 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~---------------------~~~~-~  313 (334)
                      |. +...+  . .+...++++++.|+||.++.+| |+||+++++++++.+.+.                     ...+ +
T Consensus       198 ~~-~g~~~--~-~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  272 (393)
T 1vjo_A          198 TS-LGGVP--I-FLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHT  272 (393)
T ss_dssp             TT-TTTSC--C-CTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSC
T ss_pred             cc-ccCcC--C-cccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCC
Confidence            98 32211  1 1234466799999999998787 999999999999887542                     1223 7


Q ss_pred             CcHHHHHHHHHHhcC
Q 019868          314 VSVAAEVAACAALQN  328 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~  328 (334)
                      ++.++|.++.++|+.
T Consensus       273 ~~~~~~~a~~~al~~  287 (393)
T 1vjo_A          273 APINLYYALREALRL  287 (393)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH
Confidence            789999998888875

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.95  E-value=5.1e-27  Score=223.40  Aligned_cols=226  Identities=17%  Similarity=0.106  Sum_probs=177.3

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc---CC-CCCCC-cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK---FP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~---~~-~~Yp~-~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.++|+|+.|++ ++++++.+.+++.+ +.   .. ..|+. .|    ..++++.++++++.  +++++|+|+++++..
T Consensus        41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~  118 (398)
T 3a2b_A           41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG  118 (398)
T ss_dssp             TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred             CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            3456899999988 67688888888765 21   11 22322 23    35677777777885  589999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC---CceEEEEeCCCCccccCCcHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ++++++++||+|++++|+|+.+...++..|++++.++.     +|++++++.+++.   ++++|++++|+||||.+.+.+
T Consensus       119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~  193 (398)
T 3a2b_A          119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP  193 (398)
T ss_dssp             HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred             HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence            99999999999999999999999999999999999985     5899999988742   789999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCC---CchhhhcCCCc-EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC---
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---  310 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~~~~~~-~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~---  310 (334)
                      ++.++++. ++++|+||+|..+.++.   ......+..++ +++++||||.|+++|   ||+++++++++.+.+...   
T Consensus       194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~  270 (398)
T 3a2b_A          194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVM  270 (398)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccce
Confidence            99999988 99999999998876432   12222222345 699999999999878   999999999998876431   


Q ss_pred             CCCCcHHHHH-HHHHHhcC
Q 019868          311 PYNVSVAAEV-AACAALQN  328 (334)
Q Consensus       311 ~~~~~~~~q~-aa~~~L~~  328 (334)
                      ..+.+.+.|. ++.++|++
T Consensus       271 ~~~~~~~~~~a~~~~~l~~  289 (398)
T 3a2b_A          271 FSASMTPASVASTLKALEI  289 (398)
T ss_dssp             SSBCCCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHHHHHHHHHHH
Confidence            2234445554 55677765

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.95  E-value=4.1e-27  Score=222.88  Aligned_cols=225  Identities=14%  Similarity=0.101  Sum_probs=178.0

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-CcC------CCCCCC---cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LKF------PYIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~~------~~~Yp~---~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.+++||+.|++ ++++++.+.+++.+ +..      ...|+.   .+..++|+++++++|++ +.|++++| ++++..
T Consensus        37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-t~a~~~  114 (384)
T 1bs0_A           37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS-RALLFISG-FAANQA  114 (384)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHH
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-cEEEeCCc-HHHHHH
Confidence            3556899999986 55678888888765 211      123432   46789999999999985 56666666 799999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++++++++||.|+++.|+|+.+...++..|++++.+|.     .|++++++.+++.  ++++|++++||||||.+++.++
T Consensus       115 ~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~  189 (384)
T 1bs0_A          115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  189 (384)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence            99999999999999999999999999999999999973     4789999988643  3788888999999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCC---CCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC----
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~---~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~----  311 (334)
                      +.++++. ++++|+||+|..+...   .......+ .+..++++||||.+|++|   ||+++++++++.+.+....    
T Consensus       190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~  265 (384)
T 1bs0_A          190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS  265 (384)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHHcCcEEEEECCcccceecCCCCchHHhcC-CCCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcC
Confidence            9999987 9999999999876532   11122222 234499999999999777   9999999999988765322    


Q ss_pred             CCCcHHHHHHHHHHhcC
Q 019868          312 YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~  328 (334)
                      .+.+++.+.++.++|+.
T Consensus       266 ~~~~~~~~~~~~~al~~  282 (384)
T 1bs0_A          266 TSMPPAQAQALRASLAV  282 (384)
T ss_dssp             BCCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence            36888999888877764

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.95  E-value=1.8e-27  Score=225.07  Aligned_cols=205  Identities=15%  Similarity=0.063  Sum_probs=166.6

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcC----C-C---CCCC--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKF----P-Y---IYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~----~-~---~Yp~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      +.++|+.+.. .+.|+.+.+++.+ +..    . .   .|+.  .+..++|+++++++|+++++|++|+|+++++..+++
T Consensus        16 ~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~   94 (390)
T 1elu_A           16 NKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW   94 (390)
T ss_dssp             TSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHh
Confidence            4688888763 3566788888765 211    1 1   4655  568899999999999988899999999999999999


Q ss_pred             Hh-cCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          165 CV-LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       165 ~l-~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ++ +++||+|+++.|+|..+...    ++..|++++.++.+  +++.+|++++++.++ +++++|++++|+||||.+++.
T Consensus        95 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~  173 (390)
T 1elu_A           95 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPL  173 (390)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCH
T ss_pred             CCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-CCceEEEEeccccCCceecCH
Confidence            98 79999999999999987643    46679999999965  578899999999997 689999999999999999999


Q ss_pred             HHHHHHHh----C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          238 EDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       238 ~~l~~l~~----~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      +++.++++    . ++++|+||+|......   . .+...+.++++.|+||. ..+|.|+||+++++++++.+..
T Consensus       174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~-~~~~~~~d~~~~s~~K~-~~~~~g~G~~~~~~~~~~~~~~  243 (390)
T 1elu_A          174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---L-DFSRLEVDYYAFTGHKW-FAGPAGVGGLYIHGDCLGEINP  243 (390)
T ss_dssp             HHHHHHHHHCCSSSCCEEEEECTTTBTTBC---C-CTTTSCCSEEEEESSST-TCCCTTCEEEEECTTTGGGCCC
T ss_pred             HHHHHHHhhhhhhcCcEEEEEcccccCCcC---C-ChhhcCCCEEEcccccc-ccCCCceEEEEECHHhHhhcCC
Confidence            99999999    7 9999999999843211   1 12234567999999993 3457789999999988776653

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.94  E-value=2.5e-26  Score=216.82  Aligned_cols=218  Identities=17%  Similarity=0.148  Sum_probs=178.0

Q ss_pred             CCCCCCHHHHHHHhcCcCCCCCCC---cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868          105 NPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Yp~---~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y  180 (334)
                      .+.+.++.+.+++.+... ..|+.   .-..++++.+++++|++ +++|++|+|+++++..++.+++++||+|++++|+|
T Consensus        27 ~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~  105 (386)
T 2dr1_A           27 GPVACFPEVLEIMKVQMF-SHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGA  105 (386)
T ss_dssp             SSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSH
T ss_pred             CCcCCcHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCc
Confidence            345667889999877432 24532   23567888888888987 67899999999999999999999999999999999


Q ss_pred             hh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCC
Q 019868          181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (334)
Q Consensus       181 ~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay  256 (334)
                      ..  +...++..|++++.++.+.++.+|++++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|
T Consensus       106 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~  185 (386)
T 2dr1_A          106 FGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVS  185 (386)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred             hhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccc
Confidence            87  8888888999999999877788999999999952 578999999999999999999999999987 9999999999


Q ss_pred             cCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH----------------H----hcCCCCCcH
Q 019868          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW----------------R----AKQPYNVSV  316 (334)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~----------------~----~~~~~~~~~  316 (334)
                      ..+.....    +...++++++.|+||.++.++ ++||+++++++++.+.                .    ....++.+.
T Consensus       186 ~~~~~~~~----~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (386)
T 2dr1_A          186 AMGGADIK----FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPM  260 (386)
T ss_dssp             TBTTBCCC----TTTTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCH
T ss_pred             cccCcccc----ccccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCH
Confidence            87654211    223467899999999998652 4999999999887762                1    133467889


Q ss_pred             HHHHHHHHHhcC
Q 019868          317 AAEVAACAALQN  328 (334)
Q Consensus       317 ~~q~aa~~~L~~  328 (334)
                      +.|.++.++|+.
T Consensus       261 ~~~~a~~~~l~~  272 (386)
T 2dr1_A          261 PQVFGINVALRI  272 (386)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988888864

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.94  E-value=4.4e-27  Score=223.30  Aligned_cols=207  Identities=16%  Similarity=0.169  Sum_probs=170.1

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcC----CCC------C-CCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKF----PYI------Y-PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~------Y-p~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~  161 (334)
                      .++++|+.+.++ +.++.+.+++.+ +..    .+.      | +..+..++|++++++++. ++++|++|+|+++++..
T Consensus        22 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  100 (406)
T 1kmj_A           22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL  100 (406)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence            357999999887 577888888765 211    111      1 234578999999999998 67899999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++.++    +++||+|+++.|+|..    |...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  179 (406)
T 1kmj_A          101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  179 (406)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc-cCCeEEEEeCCCccccC
Confidence            99999    8999999999999864    445567789999999977778899999999997 68999999999999999


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++.+++.++++. ++++|+||+|..+.....    +...++++++.|+||.+|++|  +||+++++++++.+....
T Consensus       180 ~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~----~~~~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~  250 (406)
T 1kmj_A          180 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWE  250 (406)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSS
T ss_pred             cCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc----ccccCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcc
Confidence            9999999999987 999999999986542111    122356799999999998888  899999999988776443

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.94  E-value=1.6e-26  Score=221.30  Aligned_cols=227  Identities=14%  Similarity=0.079  Sum_probs=179.3

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc-----------ChHHHHHHHHHhcCCCCCCEEEeCCHHHH
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-----------ESRRLRAALAKDSGLESDHILVGCGADEL  158 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~-----------g~~~lr~~lA~~~~~~~~~I~~t~G~~~~  158 (334)
                      ++++.|.|+.+.+. ++++.+++++.+ +.  ..+.+|..           ...++++.+++++++++++|++|+|++++
T Consensus        19 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a   97 (423)
T 3lvm_A           19 AMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATES   97 (423)
T ss_dssp             -CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHH
T ss_pred             ccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHH
Confidence            45678999887765 678999999987 33  22222221           24689999999999999999999999999


Q ss_pred             HHHHHHHhcC----CCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc
Q 019868          159 IDLIMRCVLD----PGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (334)
Q Consensus       159 i~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt  231 (334)
                      +..+++++++    +||+|+++.|+|+.+...+   ...|++++.++.+.++.+|+++++++++ +++++|++++|+|||
T Consensus        98 ~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~npt  176 (423)
T 3lvm_A           98 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEI  176 (423)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTT
T ss_pred             HHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC-CCcEEEEEeCCCCCC
Confidence            9999998874    7999999999999887766   4569999999987788999999999997 688999999999999


Q ss_pred             ccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       232 G~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      |.+++.+++.++++. ++++|+||+|......    ......+.++++.|+||.+|.+|  +||++++++.++.+.+...
T Consensus       177 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~  250 (423)
T 3lvm_A          177 GVVQDIAAIGEMCRARGIIYHVDATQSVGKLP----IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMH  250 (423)
T ss_dssp             CBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC----CCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSC
T ss_pred             ccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC----cChhhcCCCEEEechHHhcCCCC--eEEEEEeccccCCCCcccc
Confidence            999999999999988 9999999998753221    11223356799999999888666  8999998877665544322


Q ss_pred             ---------CCCCcHHHHHHHHHHhc
Q 019868          311 ---------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       311 ---------~~~~~~~~q~aa~~~L~  327 (334)
                               ..+.+...+.++.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~a~~~al~  276 (423)
T 3lvm_A          251 GGGHERGMRSGTLPVHQIVGMGEAYR  276 (423)
T ss_dssp             SSCTTTTTCCSCCCHHHHHHHHHHHH
T ss_pred             CCcccccccCCCCCHHHHHHHHHHHH
Confidence                     24566777666655554

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.94  E-value=7.6e-27  Score=224.59  Aligned_cols=225  Identities=21%  Similarity=0.158  Sum_probs=161.2

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcC----------hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPE----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g----------~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+.+.|+.+.+. ++++.+++++.+ +.....||...          ..++|+++|+++++++++|++|+|+++++..++
T Consensus        17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~   95 (432)
T 3a9z_A           17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI   95 (432)
T ss_dssp             -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred             CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence            457899988887 778889988875 32234454422          368999999999998899999999999999999


Q ss_pred             HHhc--------CCCCEEEEcCCCChhH-----------------HHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccC
Q 019868          164 RCVL--------DPGDKIVDCPPTFTMY-----------------EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVERE  217 (334)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~  217 (334)
                      .+++        ++||+|+++.|+|..|                 ...++..|++++.++.+. ++.+|+++++++++ +
T Consensus        96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~-~  174 (432)
T 3a9z_A           96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-P  174 (432)
T ss_dssp             HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC-T
T ss_pred             HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc-C
Confidence            9876        5899999999999765                 344455799999999654 67799999999997 6


Q ss_pred             CceEEEEeCCCCccccCCcHHHHHHHHhC-C----------CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-P----------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~----------~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      ++++|++++|+||||.+++.+++.++++. +          +++|+||+|..+..... ....   +..+++.|+||.+ 
T Consensus       175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~~---~~d~~~~s~~K~~-  249 (432)
T 3a9z_A          175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VEDL---GVDFLTIVGHKFY-  249 (432)
T ss_dssp             TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHHH---CCSEEEEEGGGTT-
T ss_pred             CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhhc---CCCEEEEehhHhc-
Confidence            79999999999999999999999999987 7          99999999976532111 1111   2236789999976 


Q ss_pred             ccccchheeEcCHHH-HHHHH---------HhcCCCCCcHHHHHHHHHHhcC
Q 019868          287 LAGLRVGYGAFPLSI-IEYLW---------RAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       287 l~G~R~G~l~~~~~~-i~~l~---------~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                        |+|+||++++++. ...+.         +....++.+.+++.++.++|+.
T Consensus       250 --g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~  299 (432)
T 3a9z_A          250 --GPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL  299 (432)
T ss_dssp             --CCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH
T ss_pred             --CCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH
Confidence              4679999998765 22222         1222356788888777666653

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.94  E-value=4e-26  Score=216.56  Aligned_cols=224  Identities=17%  Similarity=0.189  Sum_probs=177.3

Q ss_pred             cCCCCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 019868          100 IDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC  176 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~  176 (334)
                      +..++++.++++.+.+++.+......++.  ....++|++++++++.+++ +|++|+|+++++..++.+++++||+|+++
T Consensus        20 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~   99 (396)
T 2ch1_A           20 IMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA   99 (396)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             eeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEE
Confidence            44567788889999999887432222232  2378999999999999888 89999999999999999999999999999


Q ss_pred             CCCChhHH--HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEc
Q 019868          177 PPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (334)
Q Consensus       177 ~p~y~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvD  253 (334)
                      +|+|..|.  ..++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+++.+++.++++. ++++|+|
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D  179 (396)
T 2ch1_A          100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD  179 (396)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred             cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence            99999885  46778999999999877788999999999973378999999999999999999999999987 9999999


Q ss_pred             cCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh-------------------------
Q 019868          254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------  308 (334)
Q Consensus       254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-------------------------  308 (334)
                      |+|.... .+  . .+...+..+++.|++|.++ .+.++||+++++++++.+...                         
T Consensus       180 ea~~~g~-~~--~-~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (396)
T 2ch1_A          180 AVASLCG-VP--F-YMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK  254 (396)
T ss_dssp             CTTTBTT-BC--C-CTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred             ccccccC-Cc--c-chhhcCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence            9998321 11  1 1222334577899999764 335579999999988877532                         


Q ss_pred             cCCCCCcHHHHHHHHHHhcC
Q 019868          309 KQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 ~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ...++.+..+|.++.++|+.
T Consensus       255 ~~~~~~~~~~~~a~~~al~~  274 (396)
T 2ch1_A          255 RYHHTVASNLIFALREALAQ  274 (396)
T ss_dssp             CCCCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHH
Confidence            11245788888888887764

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.9e-26  Score=218.42  Aligned_cols=223  Identities=14%  Similarity=0.089  Sum_probs=173.6

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcC-----CCCCC-----CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKF-----PYIYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~Yp-----~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      +.+.|+.+.+. ++++.+.+++.+ +..     ...|+     .....++|+++++++++++++|++|+|+++++..++.
T Consensus        26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~  104 (406)
T 3cai_A           26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAE  104 (406)
T ss_dssp             SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHH
T ss_pred             CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHH
Confidence            47888888877 677888888765 221     11243     2357899999999999988999999999999999999


Q ss_pred             Hh---cCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          165 CV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       165 ~l---~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++   +++||+|+++.|+|..+...+.    ..|++++.++.+ +++.+|++++++.++ +++++|++++|+||||.+++
T Consensus       105 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~  183 (406)
T 3cai_A          105 ASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTD  183 (406)
T ss_dssp             HTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-TTEEEEEEESBCTTTCBBCC
T ss_pred             HHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-CCceEEEEeCCcCCccccCC
Confidence            87   7899999999999987544433    369999999975 667899999999997 68999999999999999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchh-eeEcCHHHHHHHHHhcC----
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQ----  310 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G-~l~~~~~~i~~l~~~~~----  310 (334)
                      .+++.++++. ++++|+||+|........    +...+.++++.|+||.+| ++  +| |+++++++++.+.....    
T Consensus       184 l~~i~~l~~~~~~~li~D~a~~~g~~~~~----~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~  256 (406)
T 3cai_A          184 LRAMTKLVHDVGALVVVDHSAAAPYRLLD----IRETDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYA  256 (406)
T ss_dssp             CHHHHHHHHHTTCEEEEECTTTTTTCCCC----HHHHCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTC
T ss_pred             HHHHHHHHHHcCCEEEEEcccccCCCCCC----chhcCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCC
Confidence            9999999987 999999999974321111    112246799999999776 44  99 99999998877654432    


Q ss_pred             -------CCCCcHHHHHHHHHHhc
Q 019868          311 -------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       311 -------~~~~~~~~q~aa~~~L~  327 (334)
                             ..+.+..++.++.++++
T Consensus       257 ~~~~~~~~~t~~~~~~~a~~~al~  280 (406)
T 3cai_A          257 TGPARLEIGVHQFGLLAGVVASIE  280 (406)
T ss_dssp             CGGGGGCCSCCCHHHHHHHHHHHH
T ss_pred             CccccccCCCccHHHHHHHHHHHH
Confidence                   24466666655555553

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.94  E-value=2.4e-25  Score=212.48  Aligned_cols=218  Identities=17%  Similarity=0.159  Sum_probs=172.9

Q ss_pred             eecCCCCCCCCCCH----HHHHHHhcC---cCCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868           98 VKIDANENPYGPPP----EVREALGQL---KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        98 i~l~~~~~~~~~~~----~v~~al~~~---~~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      ..++++++++..++    .+.+++...   ...+.|   +++...++++++++++|.+  +.++++++++++..++.+++
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~  100 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLC  100 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh
Confidence            35677888777654    344444411   112333   4556789999999999976  44555555699999999999


Q ss_pred             CCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          168 DPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      ++||+|+++.|+|+.+...+    +..|++++.++.+     |+++++++++ +++++|++++|+||||.+++.+++.++
T Consensus       101 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l  174 (398)
T 2rfv_A          101 QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGI  174 (398)
T ss_dssp             CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred             CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHH
Confidence            99999999999999887765    7789999999853     8999999997 589999999999999999999999999


Q ss_pred             HhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccch-heeEcCHHHHH-HHHHhcC---CCCCcHH
Q 019868          244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVA  317 (334)
Q Consensus       244 ~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~-G~l~~~~~~i~-~l~~~~~---~~~~~~~  317 (334)
                      ++. ++++|+||+|..+.... ..    ..+.++++.|+||.|+.+|+|+ ||+++++++++ .+.....   ..+.+++
T Consensus       175 ~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (398)
T 2rfv_A          175 AHQQGALLVVDNTFMSPYCQQ-PL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPF  249 (398)
T ss_dssp             HHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHH
T ss_pred             HHHcCCEEEEECCCcccccCC-ch----hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHH
Confidence            987 99999999999766532 21    2356799999999999899998 99999998887 5554333   3478899


Q ss_pred             HHHHHHHHhcC
Q 019868          318 AEVAACAALQN  328 (334)
Q Consensus       318 ~q~aa~~~L~~  328 (334)
                      .+.++.++|++
T Consensus       250 ~~~~~~~~l~~  260 (398)
T 2rfv_A          250 NAWLTLRGVKT  260 (398)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHhhhhh
Confidence            99999999976

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.94  E-value=2.1e-26  Score=217.15  Aligned_cols=225  Identities=13%  Similarity=0.185  Sum_probs=170.2

Q ss_pred             CCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc----CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~----~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++..++||+.+.  ++++ +++.+.+++.+ +.    ....|+..+..++++++++++|+ +++|++++|+++++..+++
T Consensus        26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~  104 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK  104 (375)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHH
Confidence            345689998876  4777 88999888765 21    12467777789999999999998 4899999999999999987


Q ss_pred             H---hc---CCC-CEEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868          165 C---VL---DPG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       165 ~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      .   +.   ++| |+|++++|+|..+...+...+..             +..++.     .|+++++++++ +++++|++
T Consensus       105 ~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  178 (375)
T 2eh6_A          105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD-EETAGIII  178 (375)
T ss_dssp             HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC-TTEEEEEE
T ss_pred             HHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc-CCeEEEEE
Confidence            4   35   788 99999999998876655443221             333331     48999999997 68999999


Q ss_pred             eCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       225 ~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      ++|+||||.+.+    .+++.++++. ++++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||+++
T Consensus       179 ~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~  254 (375)
T 2eh6_A          179 EVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILA  254 (375)
T ss_dssp             CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             eCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE---EEccccc-CCCCeEEEEE
Confidence            999999999966    5555555555 9999999999987643321  22222223333   7889999 7999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhcC
Q 019868          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       298 ~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++++.+.+  ....++.+++.|.++.++|++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (375)
T 2eh6_A          255 REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE  287 (375)
T ss_dssp             EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH
T ss_pred             cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9988887765  233467899999998888865

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.94  E-value=9.2e-26  Score=213.87  Aligned_cols=204  Identities=17%  Similarity=0.144  Sum_probs=164.6

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcCCCCCC--CcChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      .+.+..  .++++++.+.+++.+....+.++  .....++|+++++++|++++ +|++|+|+++++..++.+++++||+|
T Consensus        20 ~~~~~~--g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v   97 (393)
T 2huf_A           20 KLLMGP--GPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVI   97 (393)
T ss_dssp             CEECSS--SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             eEEecC--CCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence            455544  46778899999988742222222  34578999999999999876 89999999999999999999999999


Q ss_pred             EEcCCCChhHH--HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeE
Q 019868          174 VDCPPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (334)
Q Consensus       174 l~~~p~y~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~l  250 (334)
                      ++++|+|..+.  ..++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+++.+++.++++. ++++
T Consensus        98 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l  177 (393)
T 2huf_A           98 LIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLL  177 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred             EEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEE
Confidence            99999998743  34566899999999776778999999999973278999999999999999999999999987 9999


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchh-hcccccchheeEcCHHHHHHHHHh
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      |+||+|.....   ... +...+.++++.|+||. +|++|+  ||+++++++++.+.+.
T Consensus       178 i~D~a~~~~~~---~~~-~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~  230 (393)
T 2huf_A          178 IVDTVASLGGA---PMF-MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRR  230 (393)
T ss_dssp             EEECTTTBTTB---CCC-TTTTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTC
T ss_pred             EEEcccccCCC---Ccc-hhhcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhc
Confidence            99999863221   111 2234577999999997 567786  9999999999988764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.94  E-value=6.5e-26  Score=215.84  Aligned_cols=225  Identities=19%  Similarity=0.223  Sum_probs=177.8

Q ss_pred             CCCCeeecCCCCCCCC--CCHHHHHHHhc-Cc-CC-----CCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FP-----YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~-----~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ++.++|||+.| ++++  +++++.+++.+ +. ..     +.|+   ..+..++|+++++++|++ ++|++++| ++++.
T Consensus        43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~  119 (401)
T 1fc4_A           43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSC-FDANG  119 (401)
T ss_dssp             TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred             CCccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCCh-HHHHH
Confidence            45678999998 5676  48888888765 22 12     1332   346789999999999987 67777666 56888


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCC
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~  235 (334)
                      .++++++++||+|+++.|+|..+...++..|++++.++.     .|++++++.+++.     ++++|++++||||||.++
T Consensus       120 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~  194 (401)
T 1fc4_A          120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA  194 (401)
T ss_dssp             TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred             HHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC
Confidence            889989999999999999998888888889999999873     4789999888631     689999999999999999


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCc-CccC-CCCc-hhhhc-CCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHhc
Q 019868          236 NDEDLLKILEM-PILVVLDEAYT-EFSG-LESR-MEWVK-KHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~-~~~~-~~~~~-~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +.+++.++++. ++++|+||+|. ++.+ .+.. ....+ ..+.+++++||||.| |++|   ||+++++++++.+.+..
T Consensus       195 ~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~~~~l~~~~  271 (401)
T 1fc4_A          195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEVVEWLRQRS  271 (401)
T ss_dssp             CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHHHHHHHHhC
Confidence            99999999987 99999999995 7753 2222 21122 224579999999999 6555   99999999999887755


Q ss_pred             C----CCCCcHHHHHHHHHHhcC
Q 019868          310 Q----PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ~----~~~~~~~~q~aa~~~L~~  328 (334)
                      .    .++.+.++|.++.++|+.
T Consensus       272 ~~~~~~~~~~~~~~~a~~~~l~~  294 (401)
T 1fc4_A          272 RPYLFSNSLAPAIVAASIKVLEM  294 (401)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             cCceeCCCCCHHHHHHHHHHHHH
Confidence            2    347899999999888864

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.93  E-value=1.1e-25  Score=211.98  Aligned_cols=198  Identities=14%  Similarity=0.078  Sum_probs=162.1

Q ss_pred             CCCCCCCCCHHHHHHHhcCcCCCCCC--CcChHHHHHHHHHhcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 019868          102 ANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (334)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~~~~~~Yp--~~g~~~lr~~lA~~~~~~~--~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~  177 (334)
                      .+..+.++++++.+++.+....+.++  .....++++++++++++++  ++|++|+|+++++. ++..++++||+|++++
T Consensus         6 ~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~   84 (384)
T 3zrp_A            6 LHVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVS   84 (384)
T ss_dssp             CCSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEEC
T ss_pred             ccCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEec
Confidence            34556778899999988732222222  2346789999999999987  89999999999999 9988999999999999


Q ss_pred             CCChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEcc
Q 019868          178 PTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (334)
Q Consensus       178 p~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDe  254 (334)
                      |+|..  +...++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+++.+++.++++. ++++|+|+
T Consensus        85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~  164 (384)
T 3zrp_A           85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDG  164 (384)
T ss_dssp             SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEEC
T ss_pred             CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEEC
Confidence            99965  5566677899999999877788999999999985579999999999999999999999999998 99999999


Q ss_pred             CCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      +|.......    .+...+.++++.|+||.++ .+.++||+++++++++.+
T Consensus       165 a~~~~~~~~----~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~  210 (384)
T 3zrp_A          165 VSSVGAEEV----KAEEWNVDVYLTASQKALG-SAAGLGLLLLSPKALSIL  210 (384)
T ss_dssp             TTTTTTSCC----CTTTTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHH
T ss_pred             cccccCccc----cccccCCCEEEecCccccc-CCCceEEEEECHHHHHHh
Confidence            987543211    1123356799999999874 234589999999998877

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.93  E-value=1.7e-25  Score=211.91  Aligned_cols=204  Identities=11%  Similarity=0.077  Sum_probs=163.0

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl  174 (334)
                      .+.|+.+. +.++++.+++++.+....+.|+.  .+..++|+++++++++++++|++|+|+++++..++++++++||+|+
T Consensus         9 ~~yl~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl   87 (392)
T 2z9v_A            9 PVITLTAG-PVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVL   87 (392)
T ss_dssp             CSEECSSS-CCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEE
T ss_pred             cceeecCC-CcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEE
Confidence            46666553 56778999999887322233332  3478999999999999889999999999999999999999999999


Q ss_pred             EcCCCChhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeE
Q 019868          175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (334)
Q Consensus       175 ~~~p~y~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~l  250 (334)
                      +++|+|..+  ...++..|++++.++.++++.+|++++++++++ +++++|++++|+||||.+++.+++.++++. ++++
T Consensus        88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l  167 (392)
T 2z9v_A           88 NLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYL  167 (392)
T ss_dssp             EEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred             EecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence            999999865  344455799999999766677999999999953 578999999999999999999999999987 9999


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHH
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      |+||+|......   .. +...+.++++.|+||.+ |.+|  +||+++++++++.+..
T Consensus       168 i~D~a~~~g~~~---~~-~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~  219 (392)
T 2z9v_A          168 IVDAVSSFGGMK---TH-PEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKA  219 (392)
T ss_dssp             EEECTTTBTTBS---CC-GGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHT
T ss_pred             EEEcccccCCcc---cc-cccccceEEEecCcccccCCCc--eeEEEECHHHHHHhhh
Confidence            999999742211   11 12234569999999954 4455  5999999999888864

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.93  E-value=1.9e-26  Score=218.80  Aligned_cols=227  Identities=17%  Similarity=0.164  Sum_probs=174.2

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhc-Cc---C---CCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQ-LK---F---PYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~~---~---~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      +.++|||+.|.+ .+.+++++.+++.+ +.   .   ...|+   .....++|++++++++.+ ++|++++| ++++..+
T Consensus        42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~  119 (399)
T 3tqx_A           42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-DTILYSSC-FDANGGL  119 (399)
T ss_dssp             TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHTT
T ss_pred             CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-cEEEECch-HHHHHHH
Confidence            456899999843 22457888887764 21   1   12232   224789999999999975 56777666 6789999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +.+++++||+|+++.|+|+.+...++..|++++.++.     .|++++++.+++.     ++++|++++|+||||.+++.
T Consensus       120 l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l  194 (399)
T 3tqx_A          120 FETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADL  194 (399)
T ss_dssp             HHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCH
T ss_pred             HHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCH
Confidence            9999999999999999999999999999999999985     3567777777531     78999999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCC---Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC-
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~-  311 (334)
                      +++.++++. ++++|+||+|.......   ......+ ..+++++++||||.|+  |++.||+++++++++.+...... 
T Consensus       195 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~~  272 (399)
T 3tqx_A          195 KSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRPY  272 (399)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcce
Confidence            999999987 99999999996332221   1122222 2356799999999987  45559999999999988876433 


Q ss_pred             ---CCCcHHHHHHHHHHhcCc
Q 019868          312 ---YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       312 ---~~~~~~~q~aa~~~L~~~  329 (334)
                         .+.+.+.+.++.++++..
T Consensus       273 ~~~~~~~~~~~~~~~~~l~~~  293 (399)
T 3tqx_A          273 LFSNTVAPVIVATSLKVLELL  293 (399)
T ss_dssp             HSSCCCCHHHHHHHHHHHHHH
T ss_pred             eccCCCcHHHHHHHHHHHHHH
Confidence               367888888888887643

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.93  E-value=1.4e-25  Score=209.22  Aligned_cols=226  Identities=19%  Similarity=0.202  Sum_probs=166.8

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcCc-CCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQLK-FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~-~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd  171 (334)
                      +.++|+|+.+.+++ +++.+++++.+.. ....| ++++..+||+++|++++.+  ++++++|+++++..++.+++++||
T Consensus         2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~~~~~~~~gd   78 (347)
T 1jg8_A            2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHTQRGD   78 (347)
T ss_dssp             ---CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTC
T ss_pred             CceEEEeccccCCC-CCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCc--eEEEecCcHHHHHHHHHHhcCCCC
Confidence            35679999999988 6688999987632 22345 6778899999999999974  677888888999999998899999


Q ss_pred             EEEEcCCCChh-HH--HHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCcc-ccCCcHHHHHH
Q 019868          172 KIVDCPPTFTM-YE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLK  242 (334)
Q Consensus       172 ~Vl~~~p~y~~-~~--~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~  242 (334)
                      +|++++|+|.. |.  ..+...|++++.+ .++++.+|++++++++++     +++++|++++||||| |.+++.+++++
T Consensus        79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~  157 (347)
T 1jg8_A           79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE  157 (347)
T ss_dssp             EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence            99999999965 33  2567789999998 545666899999999974     268999999999999 99999987776


Q ss_pred             HHhC----CCeEEEccCCcCcc--C-CCCchhhhcCCCcEEEEcCCchhhcccccchh-eeEcCHHHHHHHHHhcCC---
Q 019868          243 ILEM----PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP---  311 (334)
Q Consensus       243 l~~~----~~~lIvDeay~~~~--~-~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G-~l~~~~~~i~~l~~~~~~---  311 (334)
                      |++.    ++++|+||+|..+.  . ...........+.  ++.|+||.++++   +| |+++++++++.+.+.+..   
T Consensus       158 i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~--~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 1jg8_A          158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADS--VMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGG  232 (347)
T ss_dssp             HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSE--EEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccE--EEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCC
Confidence            6654    89999999985321  1 1222222223343  345899988743   67 466788888877654433   


Q ss_pred             -CCCcHHHHHHHHHHhcC
Q 019868          312 -YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 -~~~~~~~q~aa~~~L~~  328 (334)
                       ...+...+.++..+|++
T Consensus       233 ~~~~~~~~~~~~~~~l~~  250 (347)
T 1jg8_A          233 GMRQAGVLAAAGIIALTK  250 (347)
T ss_dssp             CCSSTHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHH
Confidence             23456667766666653

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.93  E-value=1.2e-25  Score=210.19  Aligned_cols=225  Identities=11%  Similarity=0.049  Sum_probs=174.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC---cChHHHHHHHHHhcCCC--CCCEEEeCCHHHHHHHHHHHhcCCC
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPG  170 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~---~g~~~lr~~lA~~~~~~--~~~I~~t~G~~~~i~~~~~~l~~~g  170 (334)
                      ++++|+.|  |+++++++.+++.+. ..+.|+.   .+..++|++++++++..  +++|++|+|+++++..++++++++|
T Consensus         4 ~~~~~~~g--p~~~~~~v~~a~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~g   80 (366)
T 1m32_A            4 NYLLLTPG--PLTTSRTVKEAMLFD-SCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQ   80 (366)
T ss_dssp             -CEECSSS--SCCCCHHHHHTTCCC-CCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTT
T ss_pred             ccccccCC--CcCCCHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCC
Confidence            35888877  667889999998773 2244543   56889999999999932  2479999999999999999999999


Q ss_pred             CEEEEcC-CCChh-HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-CceEEEEeCCCCccccCCcHHHHHHHHhC-
Q 019868          171 DKIVDCP-PTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM-  246 (334)
Q Consensus       171 d~Vl~~~-p~y~~-~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-  246 (334)
                      |+|++.+ ++|+. +...+...|++++.++.+.++.+|++++++++++. ++++|++++|+||||.+++.+++.++++. 
T Consensus        81 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~  160 (366)
T 1m32_A           81 DKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRY  160 (366)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred             CeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHc
Confidence            9988775 66664 66677778999999997777789999999999753 58999999999999999999999999988 


Q ss_pred             CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc-----------------
Q 019868          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-----------------  309 (334)
Q Consensus       247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~-----------------  309 (334)
                      ++++|+||+|..+...   .. +...+.++++.|+||.++ .+.++||+++++++++.+....                 
T Consensus       161 ~~~li~Dea~~~~~~~---~~-~~~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (366)
T 1m32_A          161 GKTYIVDAMSSFGGIP---MD-IAALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDN  235 (366)
T ss_dssp             TCEEEEECTTTTTTSC---CC-TTTTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHT
T ss_pred             CCEEEEECCccccCcC---cc-ccccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhccc
Confidence            9999999999854321   11 223346799999999763 2345699999998887654321                 


Q ss_pred             -C--CCCCcHHHHHHHHHHhcC
Q 019868          310 -Q--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 -~--~~~~~~~~q~aa~~~L~~  328 (334)
                       .  .++.+..++.++.++|+.
T Consensus       236 ~~~~~~~~~~~~~~a~~~al~~  257 (366)
T 1m32_A          236 HGKWRFTSPTHTVLAFAQALKE  257 (366)
T ss_dssp             TTCCSSCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHH
Confidence             1  256778877777776653

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.93  E-value=5.5e-25  Score=209.54  Aligned_cols=203  Identities=16%  Similarity=0.058  Sum_probs=165.9

Q ss_pred             CCCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCCCC-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          102 ANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~~-I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      .+..|.++++++.+++.+....+.++.  ....++++.++++++.+.++ |++++|+++++..++..++++||+|++++|
T Consensus        17 ~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~   96 (411)
T 3nnk_A           17 MGPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVF   96 (411)
T ss_dssp             ESSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             ecCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecC
Confidence            345678889999999987433232332  23578999999999987765 788899999999999999999999999999


Q ss_pred             CChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      +|..  +...++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+.+.+++.++++. ++++|+||+
T Consensus        97 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea  176 (411)
T 3nnk_A           97 GRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDAT  176 (411)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred             CchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence            9976  8888889999999999877888999999999974489999999999999999999999999987 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      |......    ......+.++++.|++|.++ .+.++||+++++++++.+.+..
T Consensus       177 ~~~~~~~----~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~  225 (411)
T 3nnk_A          177 ASLGGNP----LETDVWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRK  225 (411)
T ss_dssp             TTBTTBC----CCTTTTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTC
T ss_pred             cccCCcc----cchhccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcc
Confidence            8643211    11123356799999999743 3446899999999999887654

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=2.6e-25  Score=207.27  Aligned_cols=216  Identities=15%  Similarity=0.143  Sum_probs=167.4

Q ss_pred             CCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868          103 NENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y  180 (334)
                      +..+.++++++++++.+....+.|+.  .+..++|+++++++|+++++|++|+|+++++..++.+++++||+|++++|+|
T Consensus         6 ~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~   85 (352)
T 1iug_A            6 TPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGK   85 (352)
T ss_dssp             SSSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSH
T ss_pred             cCCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCc
Confidence            34567788999999987432234443  2468999999999999888999999999999999999999999999999999


Q ss_pred             hhHH--HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccC
Q 019868          181 TMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA  255 (334)
Q Consensus       181 ~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDea  255 (334)
                      +.+.  ..++..|++++.++.+.++.+|++++++    +++++|++++|+||||.+++.+++.++++.   ++++|+||+
T Consensus        86 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a  161 (352)
T 1iug_A           86 FSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMV  161 (352)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECT
T ss_pred             hhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECC
Confidence            8865  4456689999999976677789888766    468999999999999999999999999974   899999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchh-hcccccchheeEcCHHHHHH---------HH-------HhcCCCCCcHHH
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEY---------LW-------RAKQPYNVSVAA  318 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~gl~G~R~G~l~~~~~~i~~---------l~-------~~~~~~~~~~~~  318 (334)
                      |..... +  .. +...+.++++.|+||. +|.+|  +||+++++++++.         +.       +....++++...
T Consensus       162 ~~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (352)
T 1iug_A          162 TSLLVG-E--VA-LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINL  235 (352)
T ss_dssp             TTBTTB-C--CC-SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred             ccccCc-c--ee-ccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence            973221 1  11 1222456889999994 44344  7999999987754         22       112235678888


Q ss_pred             HHHHHHHhcC
Q 019868          319 EVAACAALQN  328 (334)
Q Consensus       319 q~aa~~~L~~  328 (334)
                      +.++.++|+.
T Consensus       236 ~~a~~~al~~  245 (352)
T 1iug_A          236 VLAVAAVLEE  245 (352)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8777777654

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.93  E-value=1.2e-24  Score=209.12  Aligned_cols=200  Identities=13%  Similarity=0.101  Sum_probs=167.7

Q ss_pred             ecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 019868           99 KIDANENPYGPPPEVREALGQ-LKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (334)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~  175 (334)
                      +|+.|++++++|+++.+++.+ +.. ..|+.  .+..++|++++++++.  ++|++|+|+++++..++.++. +||+|++
T Consensus        20 ~l~~~~p~~~~p~~~~~a~~~~~~~-~~y~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~l~~l~-~gd~Vlv   95 (424)
T 2po3_A           20 PLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGV--RHAVATCNATAGLQLLAHAAG-LTGEVIM   95 (424)
T ss_dssp             CEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHHT-CCSEEEE
T ss_pred             cccccCCCCCChHHHHHHHHHHHhc-CCcccCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcC-CCCEEEE
Confidence            688999999998899888876 333 35765  6789999999999986  489999999999999999874 7899999


Q ss_pred             cCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEc
Q 019868          176 CPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (334)
Q Consensus       176 ~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvD  253 (334)
                      ++|+|..+...+...|++++.++.+. ++.+|++++++.++ +++++|+++   ||||...+.+++.++++. ++++|+|
T Consensus        96 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~D  171 (424)
T 2po3_A           96 PSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-PRTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFD  171 (424)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-TTEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             CCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-cCCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEE
Confidence            99999999999999999999999654 67899999999997 578999986   489999999999999987 9999999


Q ss_pred             cCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcC
Q 019868          254 EAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ  310 (334)
Q Consensus       254 eay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~  310 (334)
                      |+|. ++.+......   ...+ +++.||||..+++|+|+||++++ +++++.+.....
T Consensus       172 ea~~~g~~~~~~~~~---~~~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~  226 (424)
T 2po3_A          172 AAHALGCAVDGRPAG---SLGD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHN  226 (424)
T ss_dssp             CTTCTTCEETTEETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHB
T ss_pred             CccccCCeECCeecc---cccC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHh
Confidence            9998 4554332221   1122 99999997777888999999998 899888876544

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.93  E-value=3.6e-25  Score=215.97  Aligned_cols=219  Identities=15%  Similarity=0.183  Sum_probs=173.1

Q ss_pred             CeeecCCC-CCCCCCCHHHHHHHhc-----Cc-CCCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           96 DIVKIDAN-ENPYGPPPEVREALGQ-----LK-FPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        96 ~~i~l~~~-~~~~~~~~~v~~al~~-----~~-~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      ++|+|+.+ +++++.++.+.++...     .. ..+.|.   ++...++++.+++++|.+  ++++++|+++++..++. 
T Consensus        90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-  166 (464)
T 1ibj_A           90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-  166 (464)
T ss_dssp             HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-
T ss_pred             eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-
Confidence            46888887 7777777777766542     11 124453   333567888888888864  67777777889998886 


Q ss_pred             hcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          166 VLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++||+|++++|.|..+...    ++..|++++.++..     |+++++++++ +++++|++++|+||||.+++.+++.
T Consensus       167 ~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~-~~tk~v~l~~p~NptG~v~~l~~i~  240 (464)
T 1ibj_A          167 LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIS  240 (464)
T ss_dssp             TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHH
T ss_pred             HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-cCceEEEEeCCCCCCCEeecHHHHH
Confidence            789999999999999988754    45579999999853     8999999997 6899999999999999999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc-cccchheeEcC-HHHHHHHHHhc--CCCCCcH
Q 019868          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAK--QPYNVSV  316 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl-~G~R~G~l~~~-~~~i~~l~~~~--~~~~~~~  316 (334)
                      ++++. ++++|+||+|...... ...    ..+++++++|+||.|+. .|+|+||++++ +++++.+....  ..+++++
T Consensus       241 ~la~~~gi~livDea~~~g~~~-~~~----~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~  315 (464)
T 1ibj_A          241 EMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAP  315 (464)
T ss_dssp             HHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCH
T ss_pred             HHHHHcCCEEEEECCCcccccC-Chh----hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCH
Confidence            99988 9999999999753211 111    24678999999998864 48999999998 58888887765  3466789


Q ss_pred             HHHHHHHHHhcC
Q 019868          317 AAEVAACAALQN  328 (334)
Q Consensus       317 ~~q~aa~~~L~~  328 (334)
                      +.|.++.++|++
T Consensus       316 ~~~~a~~~al~~  327 (464)
T 1ibj_A          316 FDCWLCLRGIKT  327 (464)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHhchhh
Confidence            999998888875

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.93  E-value=3e-25  Score=206.51  Aligned_cols=218  Identities=15%  Similarity=0.022  Sum_probs=169.8

Q ss_pred             CCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCC--CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          103 NENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~--~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      +..+.++++.+++++.+....+.|+.  .+..++|+++++++|++  +++|++|+|+++++..+++.+++  |+|+++++
T Consensus         5 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~   82 (353)
T 2yrr_A            5 TPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVN   82 (353)
T ss_dssp             SSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEEC
T ss_pred             CCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcC
Confidence            45577888999999887322244553  34789999999999985  67899999999999999998776  89999999


Q ss_pred             CChhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      .|..+  ...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. ++++|+||+
T Consensus        83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a  162 (353)
T 2yrr_A           83 GAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV  162 (353)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred             CCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence            99875  455677899999999877778999999999973378999999999999999999999999988 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHH-----------------HhcCCCCCcHH
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW-----------------RAKQPYNVSVA  317 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~-----------------~~~~~~~~~~~  317 (334)
                      |..... +..   +...+..+++.|++|.+ |.+|  +||+++++++++.+.                 .....++.+..
T Consensus       163 ~~~~~~-~~~---~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (353)
T 2yrr_A          163 TTLGML-PFS---MRAMGVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL  236 (353)
T ss_dssp             TTTTTS-CCC---HHHHTCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred             cccccc-ccc---ccccCceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH
Confidence            963222 111   11223458889999954 5456  799999999887663                 11223567777


Q ss_pred             HHHHHHHHhcC
Q 019868          318 AEVAACAALQN  328 (334)
Q Consensus       318 ~q~aa~~~L~~  328 (334)
                      .+.++.++|+.
T Consensus       237 ~~~a~~~al~~  247 (353)
T 2yrr_A          237 LHYALLEALDL  247 (353)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77776666653

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.92  E-value=5.9e-25  Score=206.53  Aligned_cols=219  Identities=16%  Similarity=0.097  Sum_probs=163.9

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc----------ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~----------g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      |.|+.+.+ .++++.+.+++.+ +.....+|..          ...++++++++++++++++|++++|+++++..+++++
T Consensus         2 iyld~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~   80 (382)
T 4hvk_A            2 AYFDYTSA-KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTC-CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             EeecCCCc-CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence            34444433 3567888888775 3222222321          2348999999999999899999999999999999988


Q ss_pred             c----CCCCEEEEcCCCChhHHHHHHH---CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      +    ++||+|++++++|+.+...+..   .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+.+.++
T Consensus        81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  159 (382)
T 4hvk_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-cCceEEEEECCCCCceeeCCHHH
Confidence            8    9999999999999988765544   69999999987788899999999997 68899999999999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc---------
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------  309 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~---------  309 (334)
                      +.++++. ++ +|+|++|........    ....+.++++.|+||.+|.+|  +|+++++++.  .+....         
T Consensus       160 i~~l~~~~~~-li~D~a~~~~~~~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~  230 (382)
T 4hvk_A          160 ISEVLAGKAA-LHIDATASVGQIEVD----VEKIGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL  230 (382)
T ss_dssp             HHHHHSSSSE-EEEECTTTBTTBCCC----HHHHTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred             HHHHHHHcCE-EEEEhHHhcCCCCCC----chhcCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence            9999998 99 999999874321111    112245699999999877666  7777775543  111111         


Q ss_pred             CCCCCcHHHHHHHHHHhc
Q 019868          310 QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~  327 (334)
                      ...+.+...+.++.++++
T Consensus       231 ~~~~~~~~~~~~~~~al~  248 (382)
T 4hvk_A          231 RSGSENVPSIVGFGKAAE  248 (382)
T ss_dssp             SCSCCCHHHHHHHHHHHH
T ss_pred             ccCCcCHHHHHHHHHHHH
Confidence            123456666666666554

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.92  E-value=8.9e-25  Score=206.35  Aligned_cols=222  Identities=18%  Similarity=0.087  Sum_probs=169.5

Q ss_pred             CCCCCHHHHHHHhc-CcCCCCCCC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCC---------
Q 019868          106 PYGPPPEVREALGQ-LKFPYIYPD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP---------  169 (334)
Q Consensus       106 ~~~~~~~v~~al~~-~~~~~~Yp~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~---------  169 (334)
                      ..++++++.+++.+ +......+.  ++    ..++++.+++++++++++|++|+|+++++..++.++..+         
T Consensus        39 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~  118 (397)
T 3f9t_A           39 CSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGL  118 (397)
T ss_dssp             CCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc
Confidence            34556788888865 332211111  11    347888999999999999999999999999999988766         


Q ss_pred             ----CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868          170 ----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       170 ----gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                          ||+|+++.|+|..+...++..|++++.++.++++.+|++++++++++.++++|++++|+||||.+.+.+++.++++
T Consensus       119 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~  198 (397)
T 3f9t_A          119 SKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAK  198 (397)
T ss_dssp             CCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             cCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHH
Confidence                9999999999999999999999999999987788999999999997437899999999999999999999999998


Q ss_pred             C-CCeEEEccCCcCccCC--CC--------chhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCCC-
Q 019868          246 M-PILVVLDEAYTEFSGL--ES--------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-  312 (334)
Q Consensus       246 ~-~~~lIvDeay~~~~~~--~~--------~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~~-  312 (334)
                      . ++++|+||+|..+...  +.        ....... +..+++.|++|.+ .+|.|+||+++++ .+++.+......+ 
T Consensus       199 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~  276 (397)
T 3f9t_A          199 ENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMG-HCPIPSGGILFKDIGYKRYLDVDAPYLT  276 (397)
T ss_dssp             HHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTT-CCCSSCEEEEESSGGGGGGTCEECTTSS
T ss_pred             HhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEcccccc-CCCCCceEEEEeCHHHHHhhccCCcccc
Confidence            8 9999999999875421  11        0111122 5568999999965 4788999998855 4544443222221 


Q ss_pred             ------------CCcHHHHHHHHHHhcCc
Q 019868          313 ------------NVSVAAEVAACAALQNP  329 (334)
Q Consensus       313 ------------~~~~~~q~aa~~~L~~~  329 (334)
                                  ..+..++.++...+.+.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  305 (397)
T 3f9t_A          277 ETRQATILGTRVGFGGACTYAVLRYLGRE  305 (397)
T ss_dssp             SSEECSSCSSCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccccccchHHHHHHHHHHHhHH
Confidence                        12567777777776543

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.92  E-value=4.4e-25  Score=208.00  Aligned_cols=221  Identities=16%  Similarity=0.108  Sum_probs=166.5

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-CcCC-----CCCCC-----cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LKFP-----YIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~-----~~Yp~-----~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      +.|+.+.+. ++++.+++++.+ +...     ..|+.     ....++|+++++++|+++++|++|+|+++++..++.++
T Consensus         2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l   80 (382)
T 4eb5_A            2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence            345555543 677888888765 2211     12431     24678999999999998889999999999999999998


Q ss_pred             c----CCCCEEEEcCCCChhHHHHHHH---CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      .    ++||+|++++|+|+.+...+..   .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~  159 (382)
T 4eb5_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-CCCeEEEEeccCCCccccCCHHH
Confidence            8    8999999999999988766653   79999999977778899999999997 57899999999999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH-HHHHH------HhcCC
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP  311 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~-i~~l~------~~~~~  311 (334)
                      +.++++. +++ |+||+|..... +  .. +...+.++++.|+||.+|++|  +||++++++. +..+.      +....
T Consensus       160 i~~l~~~~~~~-i~D~a~~~g~~-~--~~-~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~  232 (382)
T 4eb5_A          160 ISEVLAGKAAL-HIDATASVGQI-E--VD-VEKIGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRS  232 (382)
T ss_dssp             HHHHHTTSSEE-EEECTTTBTTB-C--CC-HHHHTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSC
T ss_pred             HHHHHHHCCCE-EEEcchhcCCc-c--cC-ccccCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccC
Confidence            9999998 999 99999983211 1  11 112245699999999887666  7999987663 21110      11122


Q ss_pred             CCCcHHHHHHHHHHhc
Q 019868          312 YNVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~  327 (334)
                      ++.+...+.++.++|+
T Consensus       233 ~~~~~~~~~~~~~al~  248 (382)
T 4eb5_A          233 GSENVPSIVGFGKAAE  248 (382)
T ss_dssp             SCCCHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHH
Confidence            4566666666655554

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.92  E-value=6.2e-25  Score=209.22  Aligned_cols=224  Identities=20%  Similarity=0.136  Sum_probs=170.6

Q ss_pred             CCCeeecCCCCC-CCCCCHHHHHHHhc-Cc---C-----CCCCCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANEN-PYGPPPEVREALGQ-LK---F-----PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~~---~-----~~~Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      +.+++++..|++ +++++|++.+++.+ +.   .     ...|+. .+..++|+++|++++. +++|++++|++ ++..+
T Consensus        45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~  122 (401)
T 2bwn_A           45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDAT  122 (401)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHH
T ss_pred             CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHH
Confidence            345788888776 67677888888765 21   1     123444 3688999999999996 57899988887 66666


Q ss_pred             HHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcH
Q 019868          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +..+.  .+||+|+++.|+|+.+...++..|++++.++.+     |++++++.++.   +++++|++++|+||||.+++.
T Consensus       123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l  197 (401)
T 2bwn_A          123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI  197 (401)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred             HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence            66543  589999999999999998889999999999853     78888887752   478999999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCC--C-chhhhcC-CCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC-
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLE--S-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~--~-~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~-  311 (334)
                      +++.++++. ++++|+||+|..+.+.+  . ....... .+.+++++||||.||++|   ||+++++++++.+...... 
T Consensus       198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~  274 (401)
T 2bwn_A          198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF  274 (401)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCc
Confidence            999999988 99999999999543322  1 1111111 134699999999999888   9999999999887654322 


Q ss_pred             ---CCCcHHHHHHHHHHhc
Q 019868          312 ---YNVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ---~~~~~~~q~aa~~~L~  327 (334)
                         .+.+++++.++.++|+
T Consensus       275 ~~~~~~~~~~~~a~~~al~  293 (401)
T 2bwn_A          275 IFSTSLPPAIAAGAQASIA  293 (401)
T ss_dssp             HTSBCCCHHHHHHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHHH
Confidence               2345677777777665

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.92  E-value=2e-25  Score=211.75  Aligned_cols=215  Identities=13%  Similarity=0.106  Sum_probs=167.8

Q ss_pred             CCC-CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcCCC
Q 019868           93 KPE-DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPG  170 (334)
Q Consensus        93 ~~~-~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~~g  170 (334)
                      .+. +++|++.++++.++++++++++..    +..|..-...+++.+++++|.+ ++++++++|+++++..++.++  +|
T Consensus        25 ~g~~~v~~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~g   98 (374)
T 2aeu_A           25 KGRDALYDLSGLSGGFLIDEKDKALLNT----YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KP   98 (374)
T ss_dssp             TCGGGCEECSSCCCCCCCCHHHHHHHTS----TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CC
T ss_pred             cCccceeeecccCCCCCCCHHHHHHHHH----hcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CC
Confidence            344 689999999999999999999872    1112111245667777788873 478999999999999999977  99


Q ss_pred             CEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceE-EEEeCCCCccc-cCCcHHHHHHHHh
Q 019868          171 DKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDG-SIINDEDLLKILE  245 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~-i~l~~p~NPtG-~~~~~~~l~~l~~  245 (334)
                      |+|+++.|+|+.+..   .++..|++++.+       .|+++++++ + +++++ |++++|||||| ...+.+++.++++
T Consensus        99 d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~  169 (374)
T 2aeu_A           99 KKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-DKDTLVIITGSTMDLKVIELENFKKVINTAK  169 (374)
T ss_dssp             SEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCcccHHHHHHHHH
Confidence            999999998765332   567789999888       388999988 5 68999 99999999999 6666777777776


Q ss_pred             C-CCeEEEccCCcCccC--C-CC-chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC--CCcHHH
Q 019868          246 M-PILVVLDEAYTEFSG--L-ES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAA  318 (334)
Q Consensus       246 ~-~~~lIvDeay~~~~~--~-~~-~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~--~~~~~~  318 (334)
                      . ++++|+||+|..+..  . .. ...    .+.+++++|+||.  ++|+|+||+++++++++.+.+....+  +++++.
T Consensus       170 ~~~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~--l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~  243 (374)
T 2aeu_A          170 NKEAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPL  243 (374)
T ss_dssp             HHTCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHH
T ss_pred             HcCCEEEEECCcccccccccccCCccc----cCCcEEEecCccc--ccCcceEEEEECHHHHHHHHHhhccccCCCCHHH
Confidence            6 999999999987641  1 11 111    2346899999997  56899999999999999888766543  578899


Q ss_pred             HHHHHHHhcC
Q 019868          319 EVAACAALQN  328 (334)
Q Consensus       319 q~aa~~~L~~  328 (334)
                      +.++.++|++
T Consensus       244 ~~a~~~al~~  253 (374)
T 2aeu_A          244 LAGIYRALKN  253 (374)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888865

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.92  E-value=1.5e-25  Score=215.01  Aligned_cols=231  Identities=13%  Similarity=0.121  Sum_probs=166.7

Q ss_pred             CCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcC-C----CCCCCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~-~----~~Yp~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ++..++|+..+.+  +++ +++++.+++.+ +.. .    ..|+..+..+||++|++++ +-.+++|++|+|+++++..+
T Consensus        39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~  118 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENA  118 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHH
Confidence            4566899987764  555 67889988875 322 1    2246778899999999999 52248999999999999999


Q ss_pred             HH---HhcCCCCEEEEcCCCChhHH-HHHHHCCCe-------------EEEeeCCC-----CCCCCHHHHHHhccc----
Q 019868          163 MR---CVLDPGDKIVDCPPTFTMYE-FDAAVNGAA-------------VVKVPRKS-----DFSLNVELIADAVER----  216 (334)
Q Consensus       163 ~~---~l~~~gd~Vl~~~p~y~~~~-~~~~~~G~~-------------v~~v~~~~-----~~~~d~~~l~~~l~~----  216 (334)
                      ++   .+.++| +|++++|+|..+. ......|.+             ++.++.+.     ++.+|++++++++++    
T Consensus       119 ~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~  197 (426)
T 1sff_A          119 VKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAP  197 (426)
T ss_dssp             HHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCC
Confidence            88   677776 8999999997654 455555543             66666532     233689999998863    


Q ss_pred             CCceEEEEe-CCCCccc-cCCcHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccccc
Q 019868          217 EKPKCIFLT-SPNNPDG-SIINDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       217 ~~~~~i~l~-~p~NPtG-~~~~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                      .++++|+++ +++| || .+++.+++++|++   . ++++|+||+|.+|...+.... ....+..+.+.||||.||. |+
T Consensus       198 ~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~di~s~sK~~~~-Gl  274 (426)
T 1sff_A          198 EDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFA-MEQMGVAPDLTTFAKSIAG-GF  274 (426)
T ss_dssp             GGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTSCCSEEEECGGGGT-SS
T ss_pred             CceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhh-hhhcCCCCCEEEEcccccC-CC
Confidence            456777775 5678 99 5666666666655   3 999999999998765432211 1112222334499999996 99


Q ss_pred             chheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       291 R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+||+++++++++.+...  ...++.++++|.++.++|+
T Consensus       275 riG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~  313 (426)
T 1sff_A          275 PLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLK  313 (426)
T ss_dssp             CCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             ceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence            999999999988877542  2346789999999997775

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.92  E-value=7.9e-25  Score=206.85  Aligned_cols=221  Identities=13%  Similarity=0.106  Sum_probs=174.0

Q ss_pred             CCCCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          102 ANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      .+..|.++++++.+++.+....+.++.  ....++++.++++++.+.+ +|++|+|+++++..++++++++||+|+++.+
T Consensus        27 ~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~  106 (393)
T 3kgw_A           27 LGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTN  106 (393)
T ss_dssp             CSSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEES
T ss_pred             ccCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeC
Confidence            445677889999999887322233332  2467899999999998655 5999999999999999999999999999988


Q ss_pred             CCh--hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~--~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      +|.  .+...++..|++++.++.+.++.+|++++++++++.++++|++++||||||.+++.+++.++++. ++++|+||+
T Consensus       107 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~  186 (393)
T 3kgw_A          107 GIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV  186 (393)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred             CchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence            875  33667778999999999777778999999999974489999999999999999999999999987 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC-------------------------
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------------------  310 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~-------------------------  310 (334)
                      |.......    .....+.++++.|+||.++ .+.++||+++++++++.+.+...                         
T Consensus       187 ~~~g~~~~----~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (393)
T 3kgw_A          187 ASLGGVPI----YMDQQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVI  261 (393)
T ss_dssp             TTTTTSCC----CTTTTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCC
T ss_pred             ccccCccc----chhhcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCC
Confidence            87332111    1123455789999999763 23448999999999998875432                         


Q ss_pred             CCCCcHHHHHHHHHHhc
Q 019868          311 PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       311 ~~~~~~~~q~aa~~~L~  327 (334)
                      .++.+..++.++.++++
T Consensus       262 ~~~~~~~~~~a~~~al~  278 (393)
T 3kgw_A          262 HHTTPVTSLYCLRESLA  278 (393)
T ss_dssp             CCCCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHH
Confidence            13557777777766665

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.92  E-value=9.6e-25  Score=207.48  Aligned_cols=226  Identities=19%  Similarity=0.195  Sum_probs=169.1

Q ss_pred             CCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc---C-CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~-~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      .+..++|++.+.  ++++ +++.+.+++.+ +.   . ...|+.....++++++++++++++++|++++|+++++..+++
T Consensus        43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~  122 (395)
T 1vef_A           43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK  122 (395)
T ss_dssp             TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence            455688998876  6776 88888888765 21   1 233566678899999999998888999999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCChh-HHHHHHHCCCe------------EEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          165 CVL--DPGDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~-~~~~~~~~G~~------------v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      ++.  .+||+|++++|+|.. +...+...|.+            +..++     ..|+++++++++ +++++|+++.++|
T Consensus       123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~~~v~~~~~~~  196 (395)
T 1vef_A          123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVD-EETAAVILEPVQG  196 (395)
T ss_dssp             HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCC-TTEEEEEECSEET
T ss_pred             HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-----CCcHHHHHHHhc-cCEEEEEEeCccC
Confidence            764  678999999999864 45556666765            33333     148999999997 5788888777789


Q ss_pred             ccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       230 PtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      |||.+.+    .+++.++++. ++++|+||+|.+|...+..  ....+...+++   ||||.++. |+|+||++++++++
T Consensus       197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~~~~  272 (395)
T 1vef_A          197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMREEVA  272 (395)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE---EEcccccC-CCceEEEEehHHHH
Confidence            9998876    5666666665 9999999999976543222  22222223333   88999995 99999999999888


Q ss_pred             HHHHH--hcCCCCCcHHHHHHHHHHhcC
Q 019868          303 EYLWR--AKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       303 ~~l~~--~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +.+..  ....++.+++++.++.++|+.
T Consensus       273 ~~l~~~~~~~~~~~~~~~~~a~~~al~~  300 (395)
T 1vef_A          273 RSMPKGGHGTTFGGNPLAMAAGVAAIRY  300 (395)
T ss_dssp             HTSCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred             hhhccCCcCCCcCCCHHHHHHHHHHHHH
Confidence            77655  233467899999988888764

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.92  E-value=2.4e-24  Score=205.49  Aligned_cols=199  Identities=12%  Similarity=0.029  Sum_probs=162.1

Q ss_pred             CCCCCCCCHHHHHHHhcCcCCCCCC---CcChHHHHHHHHHhcCCCCCCEE-EeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          103 NENPYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHIL-VGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~-~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      +..|.+.++.+.+++.+... ..|+   .....++++++++++++++++++ +++|+++++..++.+++++||+|++++|
T Consensus        16 ~p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~   94 (416)
T 3isl_A           16 TPGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIY   94 (416)
T ss_dssp             SSSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             cCCCcCcCHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecC
Confidence            34566778899988877322 2232   12367899999999999887766 8899999999999999999999999999


Q ss_pred             CChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      +|..  +...++..|++++.++.+.++.+|+++++++++++++++|++++|+||||.+.+.+++.++++. ++++|+|++
T Consensus        95 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a  174 (416)
T 3isl_A           95 GRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAV  174 (416)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECT
T ss_pred             CcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence            9987  7777888999999999877788999999999974578999999999999999999999999987 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      |.......    .....+.++++.|++|.++ .+.++||+++++++++.+..
T Consensus       175 ~~~~~~~~----~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~  221 (416)
T 3isl_A          175 ATIGGCEV----KVDEWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAA  221 (416)
T ss_dssp             TTTTTSCC----CTTTTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHT
T ss_pred             ccccCCCc----chhhcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhc
Confidence            87432211    1123346799999999743 34458999999999988874

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.92  E-value=8.1e-25  Score=208.80  Aligned_cols=220  Identities=17%  Similarity=0.200  Sum_probs=177.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD  171 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd  171 (334)
                      .+++||+.+.++++  +++++++.+ +.. ..| +..+..++|++++++++.+  ++++++|+++++..++.++ +++||
T Consensus        30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd  104 (399)
T 2oga_A           30 VPFLDLKAAYEELR--AETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGD  104 (399)
T ss_dssp             BCSCCHHHHHHHTH--HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CcccccCcCCCCCC--HHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcC
Confidence            46789998888765  788888776 322 245 5567899999999999975  5777777799999999998 89999


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCe
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~  249 (334)
                      +|+++.|+|..+...++..|++++.++.++ ++.+|+++++++++ +++++|+   |+||||.+.+.+++.++++. +++
T Consensus       105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~  180 (399)
T 2oga_A          105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-PRTRALL---PVHLYGHPADMDALRELADRHGLH  180 (399)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred             EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCE
Confidence            999999999999999999999999999654 57899999999997 5788877   67899999999999999988 999


Q ss_pred             EEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHHhcCC--------------
Q 019868          250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------  311 (334)
Q Consensus       250 lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~--------------  311 (334)
                      +|+||+|..+. ++.....   .. ..+++.|+  ||.+|.+| |+||++++ +++++.+......              
T Consensus       181 li~Dea~~~g~~~~~~~~~---~~-~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~  255 (399)
T 2oga_A          181 IVEDAAQAHGARYRGRRIG---AG-SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTN  255 (399)
T ss_dssp             ECEECTTCTTCEETTEETT---CT-TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCB
T ss_pred             EEEECcccccCccCCeecc---cc-cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccC
Confidence            99999998663 2222111   11 24888998  79999779 99999986 8888887765432              


Q ss_pred             CCCcHHHHHHHHHHhcC
Q 019868          312 YNVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~~~~~~~q~aa~~~L~~  328 (334)
                      +.++.+.++++.++|+.
T Consensus       256 ~~~~~~~~a~~~~~l~~  272 (399)
T 2oga_A          256 SRLDEMQAAVLRIRLAH  272 (399)
T ss_dssp             CCCCHHHHHHHHHHHHT
T ss_pred             CCcCHHHHHHHHHHHHH
Confidence            35678888888777765

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.92  E-value=1.9e-24  Score=208.20  Aligned_cols=226  Identities=16%  Similarity=0.093  Sum_probs=173.9

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCC---C-----CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYI---Y-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~---Y-----p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.++|||+.|++ .+.+++.+.+++.+ +. ....   |     +.....+|++++++++|.+ + .++++++++++..
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~-~-~i~~~sGs~a~~~  139 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT-G-AIVFSTGYMANLG  139 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHHH
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC-c-eEEecCcHHHHHH
Confidence            3566899999975 44578888888765 21 1111   2     1233589999999999974 4 4445555568888


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC---CceEEEEeCCCCccccCCcHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      ++.+++++||.|+++.|+|..+...++..|++++.++.     .|++++++.+++.   ++++|++++++||||.+.+.+
T Consensus       140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~  214 (427)
T 2w8t_A          140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK  214 (427)
T ss_dssp             HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            88889999999999999999999999999999999873     5899999988642   789999999999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCC---Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc----
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~----  309 (334)
                      ++.++++. ++++|+||+|..+....   ......+ ..+.++++.||||.+|++|   ||+++++++++.+....    
T Consensus       215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~  291 (427)
T 2w8t_A          215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYI  291 (427)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHH
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhccccc
Confidence            99999987 99999999999876532   1111122 2345899999999998777   99999998888776542    


Q ss_pred             CCCCCcHHHHHHHHHHhcC
Q 019868          310 QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~~  328 (334)
                      ..++.+++.+.++.++|+.
T Consensus       292 ~~~~~~~~~~aa~~~al~~  310 (427)
T 2w8t_A          292 FTASLPPSVVATATTSIRK  310 (427)
T ss_dssp             SSCCCCHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHH
Confidence            2245777777777677654

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.92  E-value=3.6e-24  Score=203.00  Aligned_cols=196  Identities=21%  Similarity=0.253  Sum_probs=158.5

Q ss_pred             CCCCCCC-C---HHHHHHHhc-CcCC-CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEE
Q 019868          103 NENPYGP-P---PEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIV  174 (334)
Q Consensus       103 ~~~~~~~-~---~~v~~al~~-~~~~-~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl  174 (334)
                      .+++|++ |   +++++++.+ +... ..| +..+..++|++++++++.+ ++|++++| ++++..++.++ +++||+|+
T Consensus         5 ~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi   82 (388)
T 1b9h_A            5 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVI   82 (388)
T ss_dssp             CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEE
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEE
Confidence            4667776 5   888888765 3222 334 6677899999999999975 67888877 89999999998 89999999


Q ss_pred             EcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEE
Q 019868          175 DCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (334)
Q Consensus       175 ~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIv  252 (334)
                      ++.|+|..+...++..|++++.++.+. ++.+|+++++++++ +++++|+   |+||||.+.+.+++.++++. ++++|+
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~  158 (388)
T 1b9h_A           83 VPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQ  158 (388)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCE
T ss_pred             ECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEE
Confidence            999999999999999999999999654 48899999999997 5788777   99999999999999999988 999999


Q ss_pred             ccCCcCcc-CCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH-H--HHHHHHh
Q 019868          253 DEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I--IEYLWRA  308 (334)
Q Consensus       253 Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-~--i~~l~~~  308 (334)
                      |++|..+. +.+....   ..+ ++++.||||..+++|.|+||++++++ +  ++.+...
T Consensus       159 D~a~~~g~~~~~~~~~---~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~  214 (388)
T 1b9h_A          159 DAAHAHGARWQGKRVG---ELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLR  214 (388)
T ss_dssp             ECTTCTTCEETTEEGG---GSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHH
T ss_pred             ecchhcCCccCCeecc---ccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHH
Confidence            99998643 3222221   112 58899999877788889999999875 6  6666543

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.92  E-value=4.1e-25  Score=212.78  Aligned_cols=231  Identities=15%  Similarity=0.143  Sum_probs=156.2

Q ss_pred             CCCCeeecCCC--CCCCCC-CHHHHHHHhc-Cc-CC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~-~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ++..++|+..+  .++++. +|++++++.+ +. ..    ..|++....+++++++++++.+.++|++|+|+++++..++
T Consensus        27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al  106 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAV  106 (430)
T ss_dssp             TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHH
T ss_pred             CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHH
Confidence            45678999887  566764 7888888765 22 11    2344555678999999999988899999999999999999


Q ss_pred             HHhc--------CCCCEEEEcCCCChhHHHHHHHCCC---------------eEEEeeCCCC---CCCCHHHHHHhccc-
Q 019868          164 RCVL--------DPGDKIVDCPPTFTMYEFDAAVNGA---------------AVVKVPRKSD---FSLNVELIADAVER-  216 (334)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~G~---------------~v~~v~~~~~---~~~d~~~l~~~l~~-  216 (334)
                      +.++        .++++|++.+|+|..+...+...+.               .+..++..+.   ...|++++++++++ 
T Consensus       107 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~  186 (430)
T 3i4j_A          107 KLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE  186 (430)
T ss_dssp             HHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhc
Confidence            9876        4478999999999887765544433               2223332221   11356888888763 


Q ss_pred             --CCceEEEEeCCCC-ccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhh-cCCCcEEEEcCCchhh
Q 019868          217 --EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWV-KKHDNLIVLRTFSKRA  285 (334)
Q Consensus       217 --~~~~~i~l~~p~N-PtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~-~~~~~~i~i~S~SK~~  285 (334)
                        +++++|+++.+|| ++|....    .+++.++++. ++++|+||+|.+|...+...  ... +...+   +.+|||.+
T Consensus       187 ~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d---i~t~sK~l  263 (430)
T 3i4j_A          187 GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD---IAVLGKGL  263 (430)
T ss_dssp             CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS---EEEECGGG
T ss_pred             CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc---EEEEcccc
Confidence              3445555545567 8998554    4555555655 99999999999886543321  111 11222   33689999


Q ss_pred             cccc-cchheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868          286 GLAG-LRVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       286 gl~G-~R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~  327 (334)
                      + .| +|+||+++++++++.+.+.      ...++.++++|+++.++|+
T Consensus       264 ~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  311 (430)
T 3i4j_A          264 A-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD  311 (430)
T ss_dssp             T-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             c-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence            9 59 9999999999999999863      2347899999999999997

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.92  E-value=2.7e-24  Score=206.16  Aligned_cols=191  Identities=17%  Similarity=0.171  Sum_probs=156.3

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~  199 (334)
                      .+|++++..+||+++|++++.+ +.|++++|+ +++..++. ++++||+|++++|.|......    ++..|++++.++.
T Consensus        62 ~r~~~p~~~~l~~~la~~~g~~-~~i~~~sG~-~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  138 (403)
T 3cog_A           62 SRSGNPTRNCLEKAVAALDGAK-YCLAFASGL-AATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC  138 (403)
T ss_dssp             ----CHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             cCCCCchHHHHHHHHHHHhCCC-cEEEECCHH-HHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence            4578888899999999999975 677777775 89999999 899999999999999864433    3457999999985


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C-CeEEEccCCcCccCCCCchhhhcCCCcEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~-~~lIvDeay~~~~~~~~~~~~~~~~~~~i~  277 (334)
                      +     |+++++++++ +++++|++++|+||||.+++.+++.++++. + +++|+||+|..+....+ .    ..+.+++
T Consensus       139 ~-----d~~~l~~~i~-~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~-~----~~~~div  207 (403)
T 3cog_A          139 S-----KIKLLEAAIT-PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRP-L----ALGADIS  207 (403)
T ss_dssp             T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCT-T----TTTCSEE
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCc-c----ccCCeEE
Confidence            3     8999999997 689999999999999999999999999988 8 99999999998764222 1    1356799


Q ss_pred             EcCCchhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          278 LRTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ++|+||.|+.+| .|+||+++ ++++++.+......  ...+++.+.++...|+.
T Consensus       208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~  262 (403)
T 3cog_A          208 MYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT  262 (403)
T ss_dssp             EEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred             EEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence            999999998766 47999999 47888888766554  45788898888888875

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.92  E-value=1.5e-24  Score=205.99  Aligned_cols=225  Identities=15%  Similarity=0.191  Sum_probs=170.2

Q ss_pred             CCCCCeeecCCCCCCCC---CCHHHHHHHhc-CcC-C---CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~-~---~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++.+++|+..+.++..   .+|++.+++.+ +.. .   ..|+.+...++++.++++++  ++++++++|+++++..++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al  110 (392)
T 3ruy_A           33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAI  110 (392)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHH
Confidence            35667899988765544   57889888765 221 1   22455567899999999998  679999999999999999


Q ss_pred             HHhcCC----------CCEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          164 RCVLDP----------GDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       164 ~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +.+..+          +|+|+++.|+|..+...+...+.             .+..++.     .|+++++++++ ++++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~  184 (392)
T 3ruy_A          111 KTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAIT-PNTA  184 (392)
T ss_dssp             HHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCC-TTEE
T ss_pred             HHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhc-cCeE
Confidence            976644          68999999999766555544322             2444442     17999999997 7899


Q ss_pred             EEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cch
Q 019868          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LRV  292 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R~  292 (334)
                      +|++++|+||||.+++    .+++.++++. ++++|+||+|.+|...+....  ..+...+++   +|||.++ +| +|+
T Consensus       185 ~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---~~SK~l~-gG~~~~  260 (392)
T 3ruy_A          185 AFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY---ILGKALG-GGVFPI  260 (392)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTTSCC
T ss_pred             EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE---EEchhhh-CChhhh
Confidence            9999999999999998    8888888887 999999999988765433221  112223333   6789765 35 999


Q ss_pred             heeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       293 G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      ||+++++++++.+.+...  .++.+++++.++.++|+.
T Consensus       261 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  298 (392)
T 3ruy_A          261 SCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEV  298 (392)
T ss_dssp             EEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred             EEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH
Confidence            999999999887765544  478899999999998874

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.92  E-value=1.6e-24  Score=208.23  Aligned_cols=230  Identities=16%  Similarity=0.170  Sum_probs=161.3

Q ss_pred             CCCCeeecCCCC--CCCCC--CHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANE--NPYGP--PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~~--~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~  161 (334)
                      ++..++|+..+.  ++++.  +|++++++.+ +...     ..|+.....+++++++++++++ +++|++|+|+++++..
T Consensus        40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~  119 (419)
T 2eo5_A           40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEA  119 (419)
T ss_dssp             TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHH
Confidence            456689998887  56664  6999988865 3221     2366555678999999999987 7899999999999999


Q ss_pred             HHHHhcC-CCCEEEEcCCCChhHHHHHH-HCC-------------CeEEEeeCCCCCC----------------CCHHHH
Q 019868          162 IMRCVLD-PGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS----------------LNVELI  210 (334)
Q Consensus       162 ~~~~l~~-~gd~Vl~~~p~y~~~~~~~~-~~G-------------~~v~~v~~~~~~~----------------~d~~~l  210 (334)
                      +++.+.. +||+|++.+|+|..+...+. ..|             ..++.++.++++.                +|++++
T Consensus       120 ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l  199 (419)
T 2eo5_A          120 SIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFI  199 (419)
T ss_dssp             HHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHH
Confidence            9987654 48999999999975443322 222             3567777544332                368899


Q ss_pred             H-Hhccc----CCceEEEEeCCC-CccccC-CcHHHHHH---HHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEE
Q 019868          211 A-DAVER----EKPKCIFLTSPN-NPDGSI-INDEDLLK---ILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (334)
Q Consensus       211 ~-~~l~~----~~~~~i~l~~p~-NPtG~~-~~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~  277 (334)
                      + +++++    ++++ +++++|+ ||||.. .+.+++++   +++. ++++|+||+|.+|...+..  ........+++ 
T Consensus       200 ~~~~i~~~~~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~-  277 (419)
T 2eo5_A          200 EDYIFVNLVPPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI-  277 (419)
T ss_dssp             HHTHHHHTCCGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE-
T ss_pred             HHHHHhhccCCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE-
Confidence            9 88863    2344 4445665 678974 45554554   4544 9999999999988653321  22222334433 


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHH-HhcCCCCCcHHHHHHHHHHhcC
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~-~~~~~~~~~~~~q~aa~~~L~~  328 (334)
                        ||||.|+ +| +|+||++++++++ .+. .....++.|+++|.++.++|+.
T Consensus       278 --t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~  326 (419)
T 2eo5_A          278 --TLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDI  326 (419)
T ss_dssp             --EECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHH
T ss_pred             --Eeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHH
Confidence              7999999 59 9999999998877 652 2334578899999999999874

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.92  E-value=4.4e-25  Score=209.70  Aligned_cols=197  Identities=16%  Similarity=0.084  Sum_probs=154.7

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc----CCC-CCC-----CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK----FPY-IYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~----~~~-~Yp-----~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      +++.|.|+.+.+. ++++.+++++.+ +.    ... .|.     .....++++++++++++++++|++|+|+++++..+
T Consensus        18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~   96 (400)
T 3vax_A           18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA   96 (400)
T ss_dssp             ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred             cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence            4557888877765 677888888765 21    111 121     12357899999999999989999999999999999


Q ss_pred             HHHhc----CCCC-EEEEcCCCChhHHHHHHH---CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          163 MRCVL----DPGD-KIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       163 ~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      +++++    ++|| +|+++.++|+.+...+..   .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+
T Consensus        97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~  175 (400)
T 3vax_A           97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-PDTLLVSLMHVNNETGVI  175 (400)
T ss_dssp             HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-TTEEEEECCSBCTTTCBB
T ss_pred             HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-CCceEEEEECCCCCceee
Confidence            99887    8999 999999999887655443   69999999987788999999999997 689999999999999999


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCH
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL  299 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~  299 (334)
                      .+.+++.++++. ++++|+||+|.....   .. .+... .++++.|+||.+|.+|  +|+++ +++
T Consensus       176 ~~l~~i~~la~~~~~~li~D~a~~~~~~---~~-~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~  235 (400)
T 3vax_A          176 QPVAELAQQLRATPTYLHVDAAQGYGKV---PG-DLTTP-IDMISISGHKIGAPKG--VGALVTRRR  235 (400)
T ss_dssp             CCHHHHHHHHTTSSCEEEEECTTTTTTS---GG-GGGSC-CSEEEEETGGGTSCSS--CEEEEECBC
T ss_pred             CcHHHHHHHHHhcCCEEEEEhhhhcCCC---Cc-Chhhc-CcEEEEeHHHhCCCCc--eEEEEEecc
Confidence            999999999988 999999999974322   11 12222 5589999999777555  67777 655

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.92  E-value=3.9e-24  Score=201.43  Aligned_cols=198  Identities=8%  Similarity=0.025  Sum_probs=158.4

Q ss_pred             CCCCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC-C-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~-~-I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      +..|.++++++.+++.+....+.++..  ...++++.++++++++.+ + +++++|+++++..++++++++||+|++++|
T Consensus        24 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~  103 (376)
T 3f0h_A           24 TVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDG  103 (376)
T ss_dssp             SSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEES
T ss_pred             cCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeC
Confidence            455678899999999873332334432  356789999999998653 4 455999999999999999999999999998


Q ss_pred             CChhHH--HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868          179 TFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (334)
Q Consensus       179 ~y~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea  255 (334)
                      .|..+.  ..+...|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+|++
T Consensus       104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~  182 (376)
T 3f0h_A          104 GSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV  182 (376)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred             ChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence            765543  3466789999999987778999999999876 689999999999999999999999999987 999999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHH
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~  307 (334)
                      |..+.....    ....+.++++.|+||.++ .+|  +|++++++++++.+..
T Consensus       183 ~~~~~~~~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~  229 (376)
T 3f0h_A          183 SAFLADPFN----MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEK  229 (376)
T ss_dssp             TTTTTSCCC----HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHT
T ss_pred             ccccCcccc----ccccCccEEEecCcccccCCCc--eEEEEECHHHHHHhhc
Confidence            986543211    112234589999999997 555  6889999999988875

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.92  E-value=2.6e-24  Score=204.86  Aligned_cols=224  Identities=17%  Similarity=0.209  Sum_probs=170.1

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..+  .++++ .+|++.+++.+ +..    ...|+.+...++++.++++++.  ++|++++|+++++..++
T Consensus        36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~~al  113 (406)
T 4adb_A           36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAAL  113 (406)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHHHHH
Confidence            356678999877  24444 47888888765 222    2345666678999999999985  49999999999999999


Q ss_pred             HHhcC-------CC-CEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868          164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (334)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i  222 (334)
                      +.++.       +| |+|++++|+|..+...+...+.             ++..++.     .|+++++++++ +++++|
T Consensus       114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v  187 (406)
T 4adb_A          114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID-DSTCAV  187 (406)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS-TTEEEE
T ss_pred             HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc-CCeEEE
Confidence            98764       66 9999999999887655544333             3444442     37999999997 689999


Q ss_pred             EEeCCCCccccCC--cHHHHHHHHhC----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          223 FLTSPNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       223 ~l~~p~NPtG~~~--~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      +++ |+||||.++  +.+++++|++.    ++++|+||+|.+|...+...  ...+...+++   ||||.|+ +|+|+||
T Consensus       188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~  262 (406)
T 4adb_A          188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGA  262 (406)
T ss_dssp             EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEE
T ss_pred             EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEE
Confidence            998 999999988  77777776654    99999999999876543322  2223334444   6799999 9999999


Q ss_pred             eEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       295 l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      +++++++++.+.+...  .++.++++|.++.++|+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  298 (406)
T 4adb_A          263 LLATEECARVMTVGTHGTTYGGNPLASAVAGKVLEL  298 (406)
T ss_dssp             EEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred             EEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH
Confidence            9999999988776543  378899999999988863

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.92  E-value=1.6e-23  Score=199.70  Aligned_cols=191  Identities=15%  Similarity=0.120  Sum_probs=160.0

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~  200 (334)
                      +|+++...+|++++|+++|.+  ++++++++++++..++.+++++||+|+++.|+|..+...    ++..|++++.++. 
T Consensus        55 ~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-  131 (389)
T 3acz_A           55 RLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-  131 (389)
T ss_dssp             TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence            456677889999999999975  556666677999999998899999999999999976554    5778999999985 


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          .|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+||+|..+.... +.    ..+.+++++
T Consensus       132 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-~~----~~~~di~~~  201 (389)
T 3acz_A          132 ----SDVEKVKAAWK-PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-PL----ELGADIALH  201 (389)
T ss_dssp             ----TCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GTTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-cc----ccCCeEEEE
Confidence                38999999997 689999999999999999999999999988 99999999998765422 22    245679999


Q ss_pred             CCchhhcccccch-heeEcCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          280 TFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       280 S~SK~~gl~G~R~-G~l~~~~-~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      |+||.++.+|.|+ ||+++++ ++++.+.....  ..+.++..+.++...|+.
T Consensus       202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~  254 (389)
T 3acz_A          202 SVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT  254 (389)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred             CChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH
Confidence            9999999999998 9999988 99888876653  245678888888887765

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.91  E-value=5.6e-24  Score=204.77  Aligned_cols=231  Identities=13%  Similarity=0.153  Sum_probs=162.9

Q ss_pred             CCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc-CC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ++..++|+..+.  ++++ .+|++++++.+ +. ..    ..|+.....++++++++++++++++|++|+|+++++..++
T Consensus        41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai  120 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAM  120 (429)
T ss_dssp             TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Confidence            456689998886  4665 57889888765 22 11    2455555678999999999988999999999999999998


Q ss_pred             HHhc---C----CCCEEEEcCCCChhHHHHHHHC----------------CCeEEEeeCC---CCC-CCCHHHHHHhccc
Q 019868          164 RCVL---D----PGDKIVDCPPTFTMYEFDAAVN----------------GAAVVKVPRK---SDF-SLNVELIADAVER  216 (334)
Q Consensus       164 ~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~----------------G~~v~~v~~~---~~~-~~d~~~l~~~l~~  216 (334)
                      +.+.   +    |||+|++.+|+|..+...+...                +...+.++..   +.+ .+|++++++++++
T Consensus       121 ~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  200 (429)
T 1s0a_A          121 KMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA  200 (429)
T ss_dssp             HHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH
T ss_pred             HHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHh
Confidence            8653   2    6899999999998765433321                2334443321   133 4899999998863


Q ss_pred             --CCceEEEEeCC-CCccccCCc-HH---HHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhc
Q 019868          217 --EKPKCIFLTSP-NNPDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       217 --~~~~~i~l~~p-~NPtG~~~~-~~---~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g  286 (334)
                        .++++|+++.. |||||...+ .+   ++.++++. ++++|+||+|.+|...+..  ........+++   ||||.++
T Consensus       201 ~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~---t~sK~l~  277 (429)
T 1s0a_A          201 HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKALT  277 (429)
T ss_dssp             HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG
T ss_pred             CCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE---Eeccccc
Confidence              34555554433 699997554 44   44455554 9999999999987643321  22222223333   7899998


Q ss_pred             ccc-cchheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868          287 LAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       287 l~G-~R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~  327 (334)
                       +| +|+||+++++++++.+...       ...++.|++++.++.++|+
T Consensus       278 -~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~  325 (429)
T 1s0a_A          278 -GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLA  325 (429)
T ss_dssp             -TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             -CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence             68 9999999999999988763       2347789999999988886

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.91  E-value=4.7e-24  Score=202.60  Aligned_cols=192  Identities=18%  Similarity=0.154  Sum_probs=159.4

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~  199 (334)
                      .+|++++..+++++++++++.+ +.|++++| ++++..+++.++++||+|+++.|+|.....    .++..|++++.++.
T Consensus        47 ~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  124 (386)
T 1cs1_A           47 SRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  124 (386)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             eCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence            4567778899999999999976 67777766 899999999999999999999999986333    34568999999875


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      +     |++++++.++ +++++|++++|+||||.+++.+++.++++. ++++|+||+|..+.... ..    ..++++++
T Consensus       125 ~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~  193 (386)
T 1cs1_A          125 G-----DEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN-PL----ALGADLVL  193 (386)
T ss_dssp             T-----CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEE
T ss_pred             C-----CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-cc----ccCceEEE
Confidence            2     8999999997 689999999999999999999999999987 99999999999876532 11    24577999


Q ss_pred             cCCchhhcccccch-heeEcCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~-G~l~~~~-~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      .|+||.++.+|.|+ ||+++++ ++++.+......  ...++++++++.+.++.
T Consensus       194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  247 (386)
T 1cs1_A          194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT  247 (386)
T ss_dssp             EETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT
T ss_pred             EcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH
Confidence            99999999899997 9999975 888888765544  44788888877776653

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.91  E-value=3.1e-24  Score=204.19  Aligned_cols=223  Identities=15%  Similarity=0.146  Sum_probs=167.9

Q ss_pred             CCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---C-CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~-~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++..++|++.+  .++++ ++|++.+++.+ +.   . ...|+.+...++++.+++++|  .++|++++|+++++..+++
T Consensus        38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~  115 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIK  115 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHH
Confidence            45568899776  35554 57888888765 21   1 123555557899999999998  5799999999999999999


Q ss_pred             HhcC------C-CCEEEEcCCCChh-HHHHHHHCCCe------------EEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868          165 CVLD------P-GDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       165 ~l~~------~-gd~Vl~~~p~y~~-~~~~~~~~G~~------------v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      .+..      + +++|++.+|+|.. +...+...|.+            ++.++.     .|+++++++++ +++++|++
T Consensus       116 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  189 (397)
T 2ord_A          116 IARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMS-EDVCAVFL  189 (397)
T ss_dssp             HHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCC-TTEEEEEE
T ss_pred             HHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhh-cCeEEEEE
Confidence            7753      5 4789999999864 44466777776            667764     28999999997 68999999


Q ss_pred             eCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          225 TSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       225 ~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      ++|+||||. +++.+++++|++.    ++++|+||+|.++...+...  ...+...+++   ||||.++ +|+|+||+++
T Consensus       190 ~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~  265 (397)
T 2ord_A          190 EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIV  265 (397)
T ss_dssp             CSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee---eeccccC-CCcCeEEEEE
Confidence            999999999 8888888887764    99999999999876533222  2222222332   7899999 8999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhcC
Q 019868          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       298 ~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      +++++ .+..  ....++.++++|.++.++|+.
T Consensus       266 ~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~  297 (397)
T 2ord_A          266 NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKE  297 (397)
T ss_dssp             CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred             chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHH
Confidence            88876 5542  223367899999999988864

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.91  E-value=1e-23  Score=201.50  Aligned_cols=226  Identities=12%  Similarity=0.071  Sum_probs=172.7

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-CcC-C---CCC----CC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LKF-P---YIY----PD-PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~~-~---~~Y----p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      ++.+++||+.++. .++++|++.+++.+ +.. .   ..|    .. ....+++++++++++.+. .+++ +++++++..
T Consensus        57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~-~sGt~a~~~  134 (409)
T 3kki_A           57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE-CLLS-QSGWNANVG  134 (409)
T ss_dssp             CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE-EEEE-SCHHHHHHH
T ss_pred             CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe-EEEe-cchHHHHHH
Confidence            4677899988753 36678999888765 221 1   112    11 235689999999999753 4555 445699999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                      ++++++++||.|++++|+|+.+...+...|++++.++.     .|++++++++++.++++|++++|+||||.+++.+++.
T Consensus       135 ~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~  209 (409)
T 3kki_A          135 LLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELV  209 (409)
T ss_dssp             HHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHH
T ss_pred             HHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHH
Confidence            99999999999999999999999999999999998864     5899999999755689999999999999999999999


Q ss_pred             HHHhC-CCeEEEccCCcCccCC--CC-chhhhcC-CCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC----C
Q 019868          242 KILEM-PILVVLDEAYTEFSGL--ES-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (334)
Q Consensus       242 ~l~~~-~~~lIvDeay~~~~~~--~~-~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~----~  312 (334)
                      ++++. ++++|+||+|..+.+.  +. .....+. .+.++++.||||.|+++|   ||+++++++++.+.+....    .
T Consensus       210 ~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~~~~~~~~~~~~~~~  286 (409)
T 3kki_A          210 NISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRCVPFISYPAIFSS  286 (409)
T ss_dssp             HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGTHHHHCHHHHHSB
T ss_pred             HHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHHHHHHHhCcCccccC
Confidence            99988 9999999999885432  11 1111111 244599999999998664   9999999888877664432    2


Q ss_pred             CCcHHHHHHHHHHhcC
Q 019868          313 NVSVAAEVAACAALQN  328 (334)
Q Consensus       313 ~~~~~~q~aa~~~L~~  328 (334)
                      ..++..++++.++|+.
T Consensus       287 ~~~~~~~aa~~aal~~  302 (409)
T 3kki_A          287 TLLPYEAAGLETTLEI  302 (409)
T ss_dssp             CCCHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHH
Confidence            4667777777777653

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.91  E-value=1.1e-23  Score=195.38  Aligned_cols=182  Identities=16%  Similarity=0.098  Sum_probs=152.4

Q ss_pred             HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCCCCCCHH
Q 019868          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVE  208 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~  208 (334)
                      +|++++|+++|.+ +.|++++| ++++..++.+++++||+|+++.|+|..+...+    +..|++++.++.     .|++
T Consensus         2 ~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~   74 (331)
T 1pff_A            2 ALEGKIAKLEHAE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG   74 (331)
T ss_dssp             HHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred             hHHHHHHHHhCCC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHH
Confidence            6899999999986 56666666 89999999999999999999999999876654    458999999874     4788


Q ss_pred             HHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       209 ~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      ++++.++ +++++|++++|+||||.+++.+++.++++.  ++++|+||+|..+..... .    ..++++++.|+||.|+
T Consensus        75 ~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~~d~~~~s~~K~~~  148 (331)
T 1pff_A           75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNP-L----DLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCG-G----GGTCSEEEEETTTTTS
T ss_pred             HHHHhhc-CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCCh-h----hcCCcEEEEECccccC
Confidence            9999997 689999999999999999999999999976  899999999986553211 1    3467899999999999


Q ss_pred             ccccc-hheeEcCH-HHHHHHHHhcCC-C--CCcHHHHHHHHHHhc
Q 019868          287 LAGLR-VGYGAFPL-SIIEYLWRAKQP-Y--NVSVAAEVAACAALQ  327 (334)
Q Consensus       287 l~G~R-~G~l~~~~-~~i~~l~~~~~~-~--~~~~~~q~aa~~~L~  327 (334)
                      .+|.| +||+++++ ++++.+...... +  +.+++.+.++...++
T Consensus       149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~  194 (331)
T 1pff_A          149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL  194 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence            99999 79999998 999988877665 3  578888877666654

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.91  E-value=2.2e-23  Score=196.59  Aligned_cols=199  Identities=15%  Similarity=0.101  Sum_probs=155.8

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCC----CCCCEEEeCCHHHHHHHHHHHhc---
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---  167 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~----~~~~I~~t~G~~~~i~~~~~~l~---  167 (334)
                      .+.|.-  .|.++++++.+++.+....+++|..  ...+++++++++++.    ++++|++|+|+++++..++.++.   
T Consensus         6 ~~~~~p--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~   83 (385)
T 2bkw_A            6 DTLLIP--GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSK   83 (385)
T ss_dssp             CEECSS--SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTT
T ss_pred             ceeecC--CCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccC
Confidence            344544  3667789999998874332334433  366899999999864    46899999999999999999987   


Q ss_pred             CCCCEEEEc-CCCChhH-HHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          168 DPGDKIVDC-PPTFTMY-EFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       168 ~~gd~Vl~~-~p~y~~~-~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      ++||+|+++ .|.|..+ ...++..|++++.++. ++++.+|++++++++++.++++|++++|+||||.+++.+++.+++
T Consensus        84 ~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~  163 (385)
T 2bkw_A           84 APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAI  163 (385)
T ss_dssp             CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHH
T ss_pred             CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHH
Confidence            899999888 5566655 3567789999999997 777889999999999744789999999999999999999999999


Q ss_pred             hC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHH
Q 019868          245 EM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       245 ~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~  303 (334)
                      +.   ++++|+||+|......   .. +...+.++++.|+||.+ |++|+  ||++++++.++
T Consensus       164 ~~~~~~~~li~D~a~~~~~~~---~~-~~~~~~d~~~~s~~K~~~~~~G~--G~~~~~~~~~~  220 (385)
T 2bkw_A          164 KQTSPETFFVVDAVCSIGCEE---FE-FDEWGVDFALTASQKAIGAPAGL--SISLCSSRFMD  220 (385)
T ss_dssp             HHHCTTSEEEEECTTTTTTSC---CC-TTTTTCSEEEEESSSTTCCCSCE--EEEEECHHHHH
T ss_pred             HhhCCCCEEEEECccccCCcc---cc-ccccCceEEEecCccccccCCcc--eEEEEcHHHHH
Confidence            75   7999999999743211   11 22335678999999965 45674  99999988776

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.91  E-value=3.4e-23  Score=199.22  Aligned_cols=190  Identities=15%  Similarity=0.138  Sum_probs=154.5

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~  200 (334)
                      +|+++...+|++.+++++|.  +++++++|+++++..++.+++++||+|++++|+|..+...+..    .|++++.++.+
T Consensus        77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  154 (414)
T 3ndn_A           77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD  154 (414)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence            34666778999999999985  5788899999999999999999999999999999987766644    89999999853


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|........ .    ..+.++++.
T Consensus       155 -----d~~~l~~ai~-~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-~----~~g~div~~  223 (414)
T 3ndn_A          155 -----DLSQWERALS-VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQG-F----PLGVDVVVY  223 (414)
T ss_dssp             -----CHHHHHHHTS-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCC-G----GGTCSEEEE
T ss_pred             -----CHHHHHHhcC-CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCCeEec
Confidence                 8999999997 689999999999999999999999999987 999999999984332111 1    223469999


Q ss_pred             CCchhhcccc-cchheeEcCHHHHH-HHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIE-YLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~-~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      |+||.+|.+| +|+||++++++.+. .+......  ...++...+++...++
T Consensus       224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~  275 (414)
T 3ndn_A          224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE  275 (414)
T ss_dssp             ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG
T ss_pred             cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            9999999888 89999999988776 55533332  3456666666655554

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.90  E-value=5.4e-24  Score=205.16  Aligned_cols=225  Identities=18%  Similarity=0.173  Sum_probs=164.4

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++.+++|+..+.  ++++ .+|++.+++.+ +.  ..+.||+....+|+++++++++ .+++|++++|+++++..+++.
T Consensus        52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~~  130 (434)
T 3l44_A           52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIRV  130 (434)
T ss_dssp             TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHH
Confidence            3567789998764  5666 57899988765 32  2245788788899999999997 688999999999999999987


Q ss_pred             hcC--CCCEEEEcCCCChhHHHHHHHCCC--------------------eEEEeeCCCCCCCCHHHHHHhccc--CCceE
Q 019868          166 VLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------------AVVKVPRKSDFSLNVELIADAVER--EKPKC  221 (334)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~~G~--------------------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~  221 (334)
                      +..  ++++|++.+|+|..+...+...+.                    .++.+|.     -|++++++++++  +++++
T Consensus       131 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~  205 (434)
T 3l44_A          131 ARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVAA  205 (434)
T ss_dssp             HHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEE
T ss_pred             HHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEEE
Confidence            654  779999999999765543332222                    1222221     188999998863  34556


Q ss_pred             EEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868          222 IFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       222 i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      |+++.++|++|.+.+    .+++.++++. ++++|+||+|.+| ..+..  ....+....   +.||||.|| +|+|+||
T Consensus       206 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~  280 (434)
T 3l44_A          206 ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD---LTALGKVIG-GGLPIGA  280 (434)
T ss_dssp             EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS---EEEEEGGGG-TTSSCEE
T ss_pred             EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC---eeehhhhhc-CCcCeee
Confidence            665555667777775    6777777776 9999999999988 43322  112222222   447999998 8999999


Q ss_pred             eEcCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhc
Q 019868          295 GAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       295 l~~~~~~i~~l~~-----~~~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++++.+.+     ....++.++++++++.++|+
T Consensus       281 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~  318 (434)
T 3l44_A          281 YGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLE  318 (434)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             EEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence            9999999988766     23358899999999999887

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.90  E-value=7.6e-24  Score=197.68  Aligned_cols=229  Identities=11%  Similarity=0.091  Sum_probs=164.3

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCC--C-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYI--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~--Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~  172 (334)
                      ++|+|+.+.+. ++++.+.+++.+....+.  + ...-..++++.+++++|+++++|++|+|+++++..+++.++++||+
T Consensus        14 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~   92 (359)
T 1svv_A           14 KPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA   92 (359)
T ss_dssp             -CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred             eeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence            47999997776 778999999876322111  1 1122467788888888988899999999999999999999999999


Q ss_pred             EEEcCCCChhHHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC------CceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          173 IVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       173 Vl~~~p~y~~~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~------~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      |++++|+|..+..  .++..|++++.++.+ ++.+|++++++.+++.      ++++|++++| ||||.+++.+++++|+
T Consensus        93 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~  170 (359)
T 1svv_A           93 VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDIS  170 (359)
T ss_dssp             EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHH
T ss_pred             EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHH
Confidence            9999999998877  477899999999974 6889999999998743      3899999999 7999999966666665


Q ss_pred             h---C-CCeEEEccCCcCccCC--CCchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh---cCC-CC
Q 019868          245 E---M-PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---KQP-YN  313 (334)
Q Consensus       245 ~---~-~~~lIvDeay~~~~~~--~~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~---~~~-~~  313 (334)
                      +   . ++++|+||+|..|...  +.....+. .....+++.|++|..+  ..++|++++++++++.+...   ... +.
T Consensus       171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T 1svv_A          171 ASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMA  248 (359)
T ss_dssp             HHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred             HHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence            5   3 9999999999554311  11111100 0112377888999533  34578999898887766654   222 22


Q ss_pred             CcHHHHHHHHHHhcCc
Q 019868          314 VSVAAEVAACAALQNP  329 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~~  329 (334)
                      .+.....++.++|++.
T Consensus       249 ~~~~~~~~~~~~l~~~  264 (359)
T 1svv_A          249 KGWLLGIQFEVLMKDN  264 (359)
T ss_dssp             TTHHHHHHHHHHTSTT
T ss_pred             cchhhHHHHHHHHhhh
Confidence            2333333344567653

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.90  E-value=3.8e-24  Score=203.64  Aligned_cols=225  Identities=17%  Similarity=0.142  Sum_probs=166.3

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc----ChH---HH----HHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----ESR---RL----RAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~----g~~---~l----r~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      .++|+|..|++++  ++.+.+++.+ +.  ...+||..    |.+   .+    |+.+++++|+++++|++++|+. ++.
T Consensus        23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~-a~~   99 (407)
T 2dkj_A           23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQ-ANM   99 (407)
T ss_dssp             HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH-HHH
T ss_pred             hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHH-HHH
Confidence            4579999999988  7999999876 32  23556543    322   22    3488899998877777888765 999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhH---HHHHHHCCC--eEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      .++.+++++||+|++++|+|+.+   ...++..|.  .++.++.+ +++.+|++++++++++.++++|++++|+||  ..
T Consensus       100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~  177 (407)
T 2dkj_A          100 AVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RF  177 (407)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SC
T ss_pred             HHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CC
Confidence            99999999999999999999877   333344455  45555433 467899999999997447899999999998  77


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~  311 (334)
                      .+.+++.++++. ++++|+||+|.. +.+.+.......  ..+++++|+||.  ++|+|+||++++ +++++.+......
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~--l~g~~~G~~~~~~~~~~~~l~~~~~~  253 (407)
T 2dkj_A          178 WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT--LRGPRGGLILSNDPELGKRIDKLIFP  253 (407)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG--GCCCSCEEEEESCHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc--CCCCCceEEEECCHHHHHHHHhhhcc
Confidence            889999999988 999999999987 443221111111  257999999994  569999999999 8999988877655


Q ss_pred             C---CCcHHHHHHHHHHhcC
Q 019868          312 Y---NVSVAAEVAACAALQN  328 (334)
Q Consensus       312 ~---~~~~~~q~aa~~~L~~  328 (334)
                      +   +.+.....++.++|+.
T Consensus       254 ~~~~~~~~~~~~a~~~al~~  273 (407)
T 2dkj_A          254 GIQGGPLEHVIAGKAVAFFE  273 (407)
T ss_dssp             TTCSSCCHHHHHHHHHHHHH
T ss_pred             cccCCCcHHHHHHHHHHHHH
Confidence            3   2344444455555543

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.90  E-value=7.7e-23  Score=193.86  Aligned_cols=199  Identities=17%  Similarity=0.151  Sum_probs=160.4

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~V  173 (334)
                      ++|+|+.  +.+  ++++.+++.+ +.....++.++..++|++++++++.+  ++++++|+++++..++.++ +++||+|
T Consensus         9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~al~~~~~~~~~~~gd~V   82 (393)
T 1mdo_A            9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQ--YAVAVSSATAGMHIALMALGIGEGDEV   82 (393)
T ss_dssp             CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHHHHhCCC--cEEEecChHHHHHHHHHHcCCCCCCEE
Confidence            4688875  433  4677777765 32222236667899999999999964  8999999999999999999 8999999


Q ss_pred             EEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEE
Q 019868          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (334)
Q Consensus       174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lI  251 (334)
                      +++.|+|..+...++..|++++.++.++ ++.+|+++++++++ +++++|+++   ||||.+.+.+++.++++. ++++|
T Consensus        83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li  158 (393)
T 1mdo_A           83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVI  158 (393)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred             EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence            9999999999999999999999999654 47899999999997 578998865   589999999999999988 99999


Q ss_pred             EccCCcCcc-CCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       252 vDeay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      +||+|..+. +.....   ..  +++++.||||..+++|.|+||++++ +++++.+....
T Consensus       159 ~D~a~~~g~~~~~~~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~  213 (393)
T 1mdo_A          159 EDAAHATGTSYKGRHI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLK  213 (393)
T ss_dssp             EECTTCTTCEETTEET---TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHT
T ss_pred             EECccccCCeECCeec---CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHH
Confidence            999998642 322211   11  6799999995445567799999996 78988887654

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.90  E-value=1.3e-22  Score=193.72  Aligned_cols=191  Identities=15%  Similarity=0.084  Sum_probs=159.8

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~  200 (334)
                      +|+++...+|++++|++++.+  ++++++|+++++..++..++++||+|+++.|.|+.+...+    +..|.+++.++.+
T Consensus        62 r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  139 (392)
T 3qhx_A           62 RTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA  139 (392)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC
Confidence            346667889999999999865  6888899999999999999999999999999998776655    5579999999853


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|..+... ...    ..+.+++++
T Consensus       140 -----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~----~~~~di~~~  208 (392)
T 3qhx_A          140 -----DLDAVRAAIR-PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPL----SLGADVVLH  208 (392)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HhCCcEEEE
Confidence                 8999999997 689999999999999999999999999988 9999999999865332 111    224569999


Q ss_pred             CCchhhcccc-cchheeEcC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868          280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      |++|.+|.+| +|+||++++ +++++.+.....  .+..++..++++...++.
T Consensus       209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~  261 (392)
T 3qhx_A          209 STTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT  261 (392)
T ss_dssp             ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred             cCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence            9999999777 799999997 688887776554  356788888888887764

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.90  E-value=3e-23  Score=193.58  Aligned_cols=228  Identities=15%  Similarity=0.126  Sum_probs=165.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcCc--CCCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCC
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQLK--FPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG  170 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~--~~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g  170 (334)
                      .+++|+|+.+ ++.++++++++++.+..  +...|+ .....++++.+++++| .+++|++++|+++++..++.+++++|
T Consensus         6 ~~~~id~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~~g   83 (356)
T 1v72_A            6 RPPALGFSSD-NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTPPW   83 (356)
T ss_dssp             CCCCCBCSCG-GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCCTT
T ss_pred             CCceEeeccC-CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcCCC
Confidence            3567999876 45677899999987632  234564 4457899999999999 44469999999999999999988999


Q ss_pred             CEEEEcCCCChhHHHH--HHHC--CCeEEEeeCCCCCCCCHHHHHH-hcccC------CceEEEEeCCCCccccCCcHHH
Q 019868          171 DKIVDCPPTFTMYEFD--AAVN--GAAVVKVPRKSDFSLNVELIAD-AVERE------KPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~~--~~~~--G~~v~~v~~~~~~~~d~~~l~~-~l~~~------~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      |+|+++.|+|..+...  +...  |++++.++.+ ++.+|++++++ ++++.      ++++|++++||| ||.+++.++
T Consensus        84 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~  161 (356)
T 1v72_A           84 GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDE  161 (356)
T ss_dssp             EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHH
T ss_pred             CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHH
Confidence            9999999999765544  5555  9999999864 47899999999 88741      689999999987 999999888


Q ss_pred             HHHHHhC----CCeEEEccCCcCccC--CCCchhhhc-CCCcEEEEcCCchhhcccccchh--eeEcCHHHHHHHHHhcC
Q 019868          240 LLKILEM----PILVVLDEAYTEFSG--LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVG--YGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       240 l~~l~~~----~~~lIvDeay~~~~~--~~~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G--~l~~~~~~i~~l~~~~~  310 (334)
                      +++|++.    ++++|+|++|..+..  .+....... .....+++.|+||. |   .|+|  |+++++++++.+.....
T Consensus       162 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g---~~~G~g~~~~~~~~~~~~~~~~~  237 (356)
T 1v72_A          162 IEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-G---VLAAEAIVLFNTSLATEMSYRRK  237 (356)
T ss_dssp             HHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-T---CSSCEEEEESSGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-C---CcCccEEEEECHHHHhhHHHHhh
Confidence            8887764    899999999976431  111111111 01122455699996 3   3666  88889888887665432


Q ss_pred             ---CC-CCcHHHHHHHHHHhcCc
Q 019868          311 ---PY-NVSVAAEVAACAALQNP  329 (334)
Q Consensus       311 ---~~-~~~~~~q~aa~~~L~~~  329 (334)
                         .. ..+..++.++...+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~l~~~  260 (356)
T 1v72_A          238 RAGHLSSKMRFLSAQIDAYLTDD  260 (356)
T ss_dssp             HTTCCCSSTHHHHHHHHHHTSTT
T ss_pred             ccCchhhhHHHHHHHHHHHHHhh
Confidence               11 22445555556666654

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.90  E-value=3.7e-23  Score=199.10  Aligned_cols=230  Identities=18%  Similarity=0.172  Sum_probs=160.3

Q ss_pred             CCCCeeecCCCCC--CCC-CCHHHHHHHhc-Cc----CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        93 ~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~----~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ++..++|+..+..  +++ .+|++.+++.+ +.    ....|+.....++++.+++++++++++|++|+|+++++..+++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~  120 (433)
T 1zod_A           41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIR  120 (433)
T ss_dssp             TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence            4566889877653  455 47888888765 22    1235665556789999999999888999999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHHHHC--------------CCeEEEeeCC--CCCC--------CCHHHHHHhccc--
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDAAVN--------------GAAVVKVPRK--SDFS--------LNVELIADAVER--  216 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~~--------------G~~v~~v~~~--~~~~--------~d~~~l~~~l~~--  216 (334)
                      .+.  ..+++|++.+|+|..+...+...              |+..+.++..  ..++        +|++++++.+++  
T Consensus       121 ~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~  200 (433)
T 1zod_A          121 MAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS  200 (433)
T ss_dssp             HHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC
Confidence            653  34589999999997655433321              3333333321  1122        368999998863  


Q ss_pred             -CCceEEEEeCC-CCccccC-CcH---HHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcc
Q 019868          217 -EKPKCIFLTSP-NNPDGSI-IND---EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       217 -~~~~~i~l~~p-~NPtG~~-~~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl  287 (334)
                       .++++|+ ++| +||||.. ++.   +++.++++. ++++|+||+|.+|...+..  ....+...+   +.||||.|+.
T Consensus       201 ~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d---i~s~sK~~~~  276 (433)
T 1zod_A          201 SGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD---ILTLSKTLGA  276 (433)
T ss_dssp             CSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECHHHHT
T ss_pred             CCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC---EEEecccccC
Confidence             3455555 556 5889965 554   445555554 9999999999988643321  122222223   3389999995


Q ss_pred             cccchheeEcCHHHHHHHHHh--c--CCCCCcHHHHHHHHHHhc
Q 019868          288 AGLRVGYGAFPLSIIEYLWRA--K--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~--~--~~~~~~~~~q~aa~~~L~  327 (334)
                       |+|+||+++++++++.+.+.  .  ..++.++++|.++.++|+
T Consensus       277 -G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~  319 (433)
T 1zod_A          277 -GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLD  319 (433)
T ss_dssp             -TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             -CCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence             99999999999999988763  2  347789999999888885

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.90  E-value=1.9e-22  Score=195.44  Aligned_cols=206  Identities=12%  Similarity=0.116  Sum_probs=157.6

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V  173 (334)
                      ..++|+..+.++.+.++.+.+++...  ...| +.++..+||++++++++.  +++++++|+++++..++++++++||  
T Consensus        42 ~~ylD~~~~~~~~~~~~~~~~a~~~~--~~~y~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~al~~l~~~gd--  115 (456)
T 2ez2_A           42 DIYIDLLTDSGTNAMSDKQWAGMMMG--DEAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQ--  115 (456)
T ss_dssp             GCSEECSCSSSCCCCCHHHHHHHTTC--CCCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTC--
T ss_pred             cceeeeccccCCccCCHHHHHHhhcc--hhhcccChhHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhCCCCC--
Confidence            34678877777777788888888742  2346 566789999999999986  4899999999999999999999999  


Q ss_pred             EEcCCCC-hhHHHHHHHCCCeEEEeeCCC----------CCCCCHHHHHHhcccCC---ceEEEEeCCCC-ccccCCcHH
Q 019868          174 VDCPPTF-TMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREK---PKCIFLTSPNN-PDGSIINDE  238 (334)
Q Consensus       174 l~~~p~y-~~~~~~~~~~G~~v~~v~~~~----------~~~~d~~~l~~~l~~~~---~~~i~l~~p~N-PtG~~~~~~  238 (334)
                      +++.|+| +.|...+...|++++.++.+.          ++.+|++++++++++..   +++|++++|+| |||.+++.+
T Consensus       116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~  195 (456)
T 2ez2_A          116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMA  195 (456)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred             EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHH
Confidence            7888999 888888889999999998542          36899999999986321   38999999999 999999966


Q ss_pred             HHHHHHhC----CCeEEEccCCcC----------ccCCCCchh----hhcCCCcEEEEcCCchhhcccccchheeEc-CH
Q 019868          239 DLLKILEM----PILVVLDEAYTE----------FSGLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PL  299 (334)
Q Consensus       239 ~l~~l~~~----~~~lIvDeay~~----------~~~~~~~~~----~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~  299 (334)
                      ++++|++.    ++++|+||+|..          +.+.+....    ......+++++ |++|. +++| |+||+++ ++
T Consensus       196 ~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~~  272 (456)
T 2ez2_A          196 NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMNDD  272 (456)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESCH
T ss_pred             HHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECCH
Confidence            66666553    999999999986          233332211    11223345555 78885 4477 8999998 78


Q ss_pred             HHHHHHHHhc
Q 019868          300 SIIEYLWRAK  309 (334)
Q Consensus       300 ~~i~~l~~~~  309 (334)
                      ++++.+.+..
T Consensus       273 ~~~~~~~~~~  282 (456)
T 2ez2_A          273 EMFSSAKELV  282 (456)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888776543

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.90  E-value=8.3e-23  Score=195.09  Aligned_cols=191  Identities=16%  Similarity=0.148  Sum_probs=155.4

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~  200 (334)
                      +|+.+...++++.++++++.+ +.+ +++++++++..++.+++++||+|+++.|.|..+...+    ...|++++.++. 
T Consensus        61 r~~~~~~~~l~~~la~~~g~~-~~i-~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-  137 (398)
T 1gc0_A           61 RISNPTLNLLEARMASLEGGE-AGL-ALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-  137 (398)
T ss_dssp             --CCHHHHHHHHHHHHHHTCS-EEE-EESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC-cEE-EECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence            346667889999999999975 444 4455579999999999999999999999999877665    557999999875 


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          .|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|..+.... ..    ..+.++++.
T Consensus       138 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~-~~----~~~~d~~~~  207 (398)
T 1gc0_A          138 ----ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR-PL----ELGADLVVH  207 (398)
T ss_dssp             ----TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC-GG----GGTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCceEEEE
Confidence                28999999997 689999999999999999999999999988 99999999998765322 11    235679999


Q ss_pred             CCchhhcccccch-heeEcCHHHHH-HHHHhcC---CCCCcHHHHHHHHHHhcC
Q 019868          280 TFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       280 S~SK~~gl~G~R~-G~l~~~~~~i~-~l~~~~~---~~~~~~~~q~aa~~~L~~  328 (334)
                      |+||.++.+|+|+ ||++++++.++ .+.....   ....+++.++++.+.|+.
T Consensus       208 S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  261 (398)
T 1gc0_A          208 SATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT  261 (398)
T ss_dssp             ETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT
T ss_pred             CCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch
Confidence            9999999999998 99999988765 4543332   245788888888888875

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.90  E-value=4.4e-23  Score=197.02  Aligned_cols=189  Identities=15%  Similarity=0.121  Sum_probs=151.9

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~  200 (334)
                      +|+++...++|+++|++++.+ + +++++++++++..++. ++++||+|+++.|.|.....    .++..|++++.++.+
T Consensus        51 ~~~~~~~~~lr~~la~~~g~~-~-~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~  127 (393)
T 1n8p_A           51 RSQNPNRENLERAVAALENAQ-Y-GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL  127 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS-E-EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred             cCCChhHHHHHHHHHHHhCCC-c-EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence            356667889999999999976 4 4555555899999999 89999999999999984333    345579999998853


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-----CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-----~~~lIvDeay~~~~~~~~~~~~~~~~~~~  275 (334)
                           | ++++++++ +++++|++++|+||||.+++.+++.++++.     ++++|+||+|..+... ...    ..+.+
T Consensus       128 -----d-~~l~~~i~-~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~----~~~~d  195 (393)
T 1n8p_A          128 -----L-NDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGAD  195 (393)
T ss_dssp             -----H-HHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCS
T ss_pred             -----h-HHHHHhcc-cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH----HcCCe
Confidence                 7 89999997 689999999999999999999999999974     7999999999877642 222    22567


Q ss_pred             EEEcCCchhhcccccch-heeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          276 IVLRTFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       276 i~i~S~SK~~gl~G~R~-G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +++.|+||.+|.+|+|+ ||+++ ++++++.+......  ...++..+.++...++.
T Consensus       196 i~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~  252 (393)
T 1n8p_A          196 IVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT  252 (393)
T ss_dssp             EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred             EEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch
Confidence            99999999999999999 99998 58888888766442  34567777766666654

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.89  E-value=4.3e-23  Score=196.19  Aligned_cols=226  Identities=17%  Similarity=0.157  Sum_probs=165.4

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-C---CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~---~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++++|++.|  .++++ .+|++.+++.+ +.. .   ..|+.+...++++.++++++  +++|++++|+++++..++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al  110 (395)
T 3nx3_A           33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAM  110 (395)
T ss_dssp             TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHH
Confidence            356678999988  66776 57889888765 322 1   22455557789999999988  679999999999999999


Q ss_pred             HHhc-------CCCCEEEEcCCCChhHHHHHHHCC-------------CeEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868          164 RCVL-------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (334)
Q Consensus       164 ~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~G-------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~  223 (334)
                      +.+.       .++|+|++.+|+|..+...+...+             .++..++.     .|+++++++++ +++++|+
T Consensus       111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~  184 (395)
T 3nx3_A          111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVN-EKTCAII  184 (395)
T ss_dssp             HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCC-TTEEEEE
T ss_pred             HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhcc-CCeEEEE
Confidence            8765       457999999999986654444332             34555543     27999999997 6788999


Q ss_pred             EeCCCCccccCC-cHHHHH---HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868          224 LTSPNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       224 l~~p~NPtG~~~-~~~~l~---~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      ++.++|++|... +.++++   ++++. ++++|+||+|.+|...+.... ....+....+.||||.++ .|+|+||++++
T Consensus       185 ~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~-~~~~~~~~d~~t~sK~~~-~G~~~G~~~~~  262 (395)
T 3nx3_A          185 LESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFA-YEHAQILPDIMTSAKALG-CGLSVGAFVIN  262 (395)
T ss_dssp             EESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSEEEECGGGT-TTSCCEEEEEC
T ss_pred             EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchh-HHhcCCCCCEEEeccccc-CCCceEEEEEc
Confidence            888888888875 544444   45554 999999999998864332211 111122222447899998 49999999999


Q ss_pred             HHH-HHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          299 LSI-IEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       299 ~~~-i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +++ ++.+.+..  ..++.++++++++.++|+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~  294 (395)
T 3nx3_A          263 QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFE  294 (395)
T ss_dssp             HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred             hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence            998 88776543  347889999999999887

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.89  E-value=3e-23  Score=193.85  Aligned_cols=217  Identities=16%  Similarity=0.063  Sum_probs=163.3

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-Cc-----CCCCCCCc--ChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhc
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LK-----FPYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVL  167 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~-----~~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~  167 (334)
                      .+.+.  ..|.++++++.+++.+ +.     ..+.|+..  ...++++.++++++++ +++|++|+|+++++..++.+++
T Consensus         5 ~~~~~--p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~   82 (362)
T 3ffr_A            5 KIYFT--PGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV   82 (362)
T ss_dssp             CEEEC--SSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred             ceecc--CCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence            34443  3456667777755543 21     11233332  2568999999999884 6789999999999999999999


Q ss_pred             CCCCEEEEcCCCChh-HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          168 DPGDKIVDCPPTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~-~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      ++ +.+++..+.|.. +...++..|++++.++.+.++.+|+++++  ++ +++++|++++|+||||.+++.+++.++++.
T Consensus        83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~  158 (362)
T 3ffr_A           83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-ADAEIICLTHNETSSGVSMPVEDINTFRDK  158 (362)
T ss_dssp             SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-TTCCEEEEESEETTTTEECCHHHHTTSGGG
T ss_pred             CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-CCccEEEEEcCCCCcceeCCHHHHHHHHHh
Confidence            88 656666667762 34566778999999998777899999998  54 689999999999999999999999999874


Q ss_pred             --CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcC-------------
Q 019868          247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ-------------  310 (334)
Q Consensus       247 --~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~-------------  310 (334)
                        ++++|+|++|..+......      .+..+++.|+||.|+ ++|  +|++++++++++.+.+...             
T Consensus       159 ~p~~~li~D~a~~~~~~~~~~------~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~  230 (362)
T 3ffr_A          159 NKDALIFVDAVSSLPYPKFDW------TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPS  230 (362)
T ss_dssp             STTSEEEEECTTTTTSSCCCT------TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred             CCCCEEEEecccccCCcccCh------hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHH
Confidence              8999999999865432111      114589999999998 677  5888899999888876543             


Q ss_pred             ----------CCCCcHHHHHHHHHHhc
Q 019868          311 ----------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       311 ----------~~~~~~~~q~aa~~~L~  327 (334)
                                .++++..++.++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~al~  257 (362)
T 3ffr_A          231 MLEKARVNQTPETPNAMNIFLLGKVTG  257 (362)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCchHHHHHHHHHHHH
Confidence                      45677777777766665

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.89  E-value=4.1e-23  Score=199.30  Aligned_cols=230  Identities=14%  Similarity=0.153  Sum_probs=164.7

Q ss_pred             CCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCCCCC-----CCcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHH
Q 019868           93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLES-DHILVGCGADELIDLI  162 (334)
Q Consensus        93 ~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~  162 (334)
                      ++.+++|+..|.+  +++ .+|++.+++.+ +.....|     +.....++++.++++++... ++|++++|+++++..+
T Consensus        41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~a  120 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA  120 (439)
T ss_dssp             TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHH
T ss_pred             CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHH
Confidence            5667899998876  555 78899888765 3222222     33446788889999887666 7999999999999999


Q ss_pred             HHHh--cCCCCEEEEcCCCChhHHHHHHHCCCe-E--------------EEeeCCCCCCC-----CHHHHHHhcc---cC
Q 019868          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAA-V--------------VKVPRKSDFSL-----NVELIADAVE---RE  217 (334)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~-v--------------~~v~~~~~~~~-----d~~~l~~~l~---~~  217 (334)
                      ++.+  ..++++|++.+|.|..+...+...+.. .              ..++.++.+..     |+++++++++   .+
T Consensus       121 l~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (439)
T 3dxv_A          121 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAG  200 (439)
T ss_dssp             HHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCC
Confidence            9975  346678888899886655444443322 1              22232221112     6899999883   35


Q ss_pred             CceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhccccc
Q 019868          218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                      ++++|+++.++|++|.+.+    .+++.++++. ++++|+||+|.+|...+..  ....+...+++   ||||.|+ +|+
T Consensus       201 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~---s~sK~~~-~G~  276 (439)
T 3dxv_A          201 SIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GGL  276 (439)
T ss_dssp             CEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TTS
T ss_pred             CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE---EEcchhc-CCc
Confidence            6788888888999999988    7777777776 9999999999987543321  12222223333   8999999 699


Q ss_pred             chheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       291 R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+||+++++++++.+.+.  ...+ .+++++.++.++|+
T Consensus       277 riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~  314 (439)
T 3dxv_A          277 PLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLE  314 (439)
T ss_dssp             CCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred             ceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence            999999999999887655  3347 89999999999886

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.89  E-value=1.8e-22  Score=194.51  Aligned_cols=194  Identities=18%  Similarity=0.125  Sum_probs=157.7

Q ss_pred             HHHHHHHhcC---------cCCCCCCCcChHHHHHHHHHhcCCCCCCEEE--eCCHHHHHHHHHHHhcCCCCEEEEcC-C
Q 019868          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P  178 (334)
Q Consensus       111 ~~v~~al~~~---------~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~--t~G~~~~i~~~~~~l~~~gd~Vl~~~-p  178 (334)
                      ++|.+++.+.         ..++.|++.+..+|++.+|+++|.+.. ++.  ++|+++++..++.++++|||+|++++ |
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~  124 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGE  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSS
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4566776531         123667888889999999999997644 442  77888999999999999999999999 9


Q ss_pred             CChhHHHHH-----------HHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeC----CCCccccCCcHHHHHH
Q 019868          179 TFTMYEFDA-----------AVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLLK  242 (334)
Q Consensus       179 ~y~~~~~~~-----------~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~----p~NPtG~~~~~~~l~~  242 (334)
                      .|..+....           +..|++++.++.++++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.+
T Consensus       125 ~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~  204 (427)
T 3i16_A          125 PYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVD  204 (427)
T ss_dssp             CCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHH
T ss_pred             ccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHH
Confidence            998877443           45699999999767778999999999974 5899999998    9999999999999999


Q ss_pred             HHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHhc
Q 019868          243 ILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       243 l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~  309 (334)
                      +++.   ++++|+|++|..+.....+..    .+.+++++|+||.+|.+| .+.||+++++++++.+....
T Consensus       205 la~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~  271 (427)
T 3i16_A          205 CVKNIRKDIICFVDNCYGEFMDTKEPTD----VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRL  271 (427)
T ss_dssp             HHHHHCTTSEEEEECTTTTTSSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHH
T ss_pred             HHHHhCCCCEEEEECCCccccccCCccc----cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhc
Confidence            9975   899999999998763322222    234599999999998665 67899999999999998754

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.89  E-value=9.9e-23  Score=191.87  Aligned_cols=201  Identities=17%  Similarity=0.169  Sum_probs=161.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCE
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDK  172 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~  172 (334)
                      .++++++.+.+++.+   +.+++.+. .....|+.++..++|++++++++.+  ++++++|+++++..++.++ +++||+
T Consensus         6 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~~gd~   80 (374)
T 3uwc_A            6 VPYSYLERQFADIEP---YLNDLREFIKTADFTLGAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIGAGDE   80 (374)
T ss_dssp             BCSCCHHHHTSSCHH---HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred             ceeeccccCCCCchH---HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCCCE
Confidence            346788888777653   77777653 3323347778999999999999965  7889999999999999999 899999


Q ss_pred             EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEE
Q 019868          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (334)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lI  251 (334)
                      |+++.|+|..+...++..|++++.++.++++.+|+++++++++ +++++|+   |+||||...+.+++.++++. ++++|
T Consensus        81 v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li  156 (374)
T 3uwc_A           81 VITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIV  156 (374)
T ss_dssp             EEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEE
T ss_pred             EEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEE
Confidence            9999999999999999999999999977778899999999997 5788877   99999999999999999987 99999


Q ss_pred             EccCCcCccC-CCCchhhhcCCCcEEEEcCCc--hhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          252 LDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       252 vDeay~~~~~-~~~~~~~~~~~~~~i~i~S~S--K~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      +||+|..+.. ........    .++++.|+|  |.++.+|. .|+++++ +++++.+....
T Consensus       157 ~D~~~~~g~~~~~~~~~~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~  213 (374)
T 3uwc_A          157 EDACQTILGRINDKFVGSW----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYR  213 (374)
T ss_dssp             EECTTCTTCEETTEETTSS----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHT
T ss_pred             EeCCCccCceeCCeecccc----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHH
Confidence            9999986542 22111111    247788866  98875465 8888875 57777777654

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.89  E-value=1.7e-22  Score=194.28  Aligned_cols=225  Identities=16%  Similarity=0.204  Sum_probs=165.9

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..+.  ++++ .+|++.+++.+ +..    ...|+.+...++++.++++++  .++|++++|+++++..++
T Consensus        54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al  131 (420)
T 2pb2_A           54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAF  131 (420)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHH
Confidence            3566789998763  5554 57888888765 222    123555557889999999987  579999999999999999


Q ss_pred             HHhcC-------CC-CEEEEcCCCChhHHH-HHHHCCCe------------EEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868          164 RCVLD-------PG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI  222 (334)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~-~~~~~G~~------------v~~v~~~~~~~~d~~~l~~~l~~~~~~~i  222 (334)
                      +.+..       +| ++|++++|+|..+.. .....|.+            +..++.     .|+++++++++ +++++|
T Consensus       132 ~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~-~~~~~v  205 (420)
T 2pb2_A          132 KLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMD-DHTCAV  205 (420)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCC-TTEEEE
T ss_pred             HHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhc-cCceEE
Confidence            98765       67 599999999976543 34445543            455543     28999999997 689999


Q ss_pred             EEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchhee
Q 019868          223 FLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       223 ~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      +++.++|++|. +++.+++++|.+.    ++++|+||+|.+|...+...  ...+...+++   ||||.++ +|+|+||+
T Consensus       206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii---t~sK~l~-~G~~iG~~  281 (420)
T 2pb2_A          206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAM  281 (420)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEE
T ss_pred             EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE---Eeccccc-CCCceEEE
Confidence            99888888884 5777777776654    99999999998876543322  2222233443   7899999 89999999


Q ss_pred             EcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhcC
Q 019868          296 AFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       296 ~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++++++.+..  ....++.++++++++.++|+.
T Consensus       282 ~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~  316 (420)
T 2pb2_A          282 LTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDI  316 (420)
T ss_dssp             EECHHHHTTCC----CCEECCCHHHHHHHHHHHHH
T ss_pred             EEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHH
Confidence            999998776654  233478899999999888763

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.89  E-value=8.2e-23  Score=198.12  Aligned_cols=232  Identities=13%  Similarity=0.072  Sum_probs=164.5

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++++|+..|  .++++ .+|++++++.+ +...    ..|+.....++++.++++++.+.+ |++|+|+++++..++
T Consensus        46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al  124 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAF  124 (452)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHH
Confidence            456778999887  45565 46889988765 3221    234444567899999999887666 999999999999999


Q ss_pred             HHhc-----C---CCCEEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCC---C---------HHHH
Q 019868          164 RCVL-----D---PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSL---N---------VELI  210 (334)
Q Consensus       164 ~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~---d---------~~~l  210 (334)
                      +.+.     .   ++++|++.+|+|..+...+...+..             +..++....+..   |         ++++
T Consensus       125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  204 (452)
T 3n5m_A          125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV  204 (452)
T ss_dssp             HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence            9876     5   7899999999998776555544322             333432111111   1         8999


Q ss_pred             HHhcc---cCCceEEEEeCC-CCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          211 ADAVE---REKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       211 ~~~l~---~~~~~~i~l~~p-~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                      +++++   .+++++|+++.+ +| ||.+.+    .+++.++++. ++++|+||+|.+|...+.... ....+...-+.+|
T Consensus       205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~-~~~~~~~~di~t~  282 (452)
T 3n5m_A          205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFG-FMNYDVKPDIITM  282 (452)
T ss_dssp             HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTCCCSEEEE
T ss_pred             HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccch-hhhcCCCCCEEee
Confidence            98886   245677887777 89 998774    4555555655 999999999998865433211 1111211223369


Q ss_pred             chhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868          282 SKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       282 SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ||.++. | +|+||+++++++++.+.+        ....++.++++++++.++|+
T Consensus       283 sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  336 (452)
T 3n5m_A          283 AKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLE  336 (452)
T ss_dssp             CGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHH
T ss_pred             cccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHH
Confidence            999985 9 999999999999988843        22347889999999999987

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.89  E-value=1.8e-22  Score=192.59  Aligned_cols=222  Identities=17%  Similarity=0.106  Sum_probs=157.2

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-------cChH----HHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-------PESR----RLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-------~g~~----~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.|+|..++++.  ++.+++++.+ +.  ...+||.       ....    .+++.+++++++++++|++++| ++++..
T Consensus        26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~  102 (417)
T 3n0l_A           26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQG  102 (417)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHH
Confidence            458888887765  7899999876 31  2223332       1222    3555888999998888999888 699999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHH---HHHH--CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEF---DAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~--~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.+++++||+|+++.|+|..+..   ....  .+..++.++.++++.+|++++++++++.++++|++++|+|  |...+
T Consensus       103 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~  180 (417)
T 3n0l_A          103 VYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID  180 (417)
T ss_dssp             HHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC
T ss_pred             HHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC
Confidence            999999999999999999976544   2223  4556677776677889999999999755899999888886  88999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCCC-
Q 019868          237 DEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-  312 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~~-  312 (334)
                      .+++.++++. ++++|+||+|. ++.+.+.....+.  ..++++.|+||.+  +|+|+||++++ +++++.+.+..... 
T Consensus       181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~  256 (417)
T 3n0l_A          181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGI  256 (417)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc--cceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcc
Confidence            9999999988 99999999964 3322221111111  3458999999976  78999999998 79999888776553 


Q ss_pred             --CCcHHHHHHHHHHh
Q 019868          313 --NVSVAAEVAACAAL  326 (334)
Q Consensus       313 --~~~~~~q~aa~~~L  326 (334)
                        +++...+.++..++
T Consensus       257 ~~~~~~~~~aa~~~a~  272 (417)
T 3n0l_A          257 QGGPLMHVIAAKAVGF  272 (417)
T ss_dssp             CSSCCHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHH
Confidence              34455444444444

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.89  E-value=2.1e-22  Score=193.30  Aligned_cols=179  Identities=19%  Similarity=0.193  Sum_probs=151.1

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHH----------HH
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDA----------AV  189 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~---t~G~~~~i~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~----------~~  189 (334)
                      +.|++.+..+|++.+|+++|.+.  .++   ++|+++++..++.+++++||+|++++ |.|..+...+          +.
T Consensus        54 ~~y~~~~~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~  131 (409)
T 3jzl_A           54 YGYDDEGRDTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKD  131 (409)
T ss_dssp             TCTTCHHHHHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGG
T ss_pred             CCCChhHHHHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHH
Confidence            66788888999999999999753  344   78889999999999999999999998 9999887543          45


Q ss_pred             CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeC----CCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCC
Q 019868          190 NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS----PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGL  262 (334)
Q Consensus       190 ~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~----p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~  262 (334)
                      .|++++.++.++++.+|+++++++++ +++++|++++    |+||||.+.+.+++.++++.   ++++|+|++|..+...
T Consensus       132 ~G~~~~~v~~~~~g~~d~e~l~~ai~-~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~  210 (409)
T 3jzl_A          132 FHIGYSSVPLLENGDVDFPRIAKKMT-PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY  210 (409)
T ss_dssp             GTCEEEECCCCTTSCCCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS
T ss_pred             cCCEEEEeCCCCCCCcCHHHHHHhcc-CCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc
Confidence            79999999987778899999999997 6899999999    99999999999999999975   8999999999987642


Q ss_pred             CCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHhc
Q 019868          263 ESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~  309 (334)
                      ..+..    .+.+++++|+||.+|.+| .+.||+++++++++.+.+..
T Consensus       211 ~~p~~----~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~  254 (409)
T 3jzl_A          211 QEPPE----VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRL  254 (409)
T ss_dssp             CCSGG----GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHH
T ss_pred             CCccc----cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHh
Confidence            22222    234599999999998665 45699999999999988754

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.89  E-value=8.9e-22  Score=188.85  Aligned_cols=179  Identities=20%  Similarity=0.269  Sum_probs=145.5

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh
Q 019868          106 PYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM  182 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~  182 (334)
                      .++.++.+.+++.. ...+.|.   .+...++|++++++++.+  ++++++|+++++..++.+++++||+|+++.|.|..
T Consensus        31 ~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~  107 (412)
T 2cb1_A           31 GFKTLEEGQERFAT-GEGYVYARQKDPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQ  107 (412)
T ss_dssp             CCSSHHHHHHHHHH-CCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHH
T ss_pred             ecCChHHHHHHhcc-ccCcCcCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchh
Confidence            45666667666652 2335553   245789999999999964  89999999999999999999999999999999986


Q ss_pred             HHHH----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868          183 YEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (334)
Q Consensus       183 ~~~~----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~  257 (334)
                      +...    ++..|++++.++.      |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|.
T Consensus       108 ~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~  180 (412)
T 2cb1_A          108 TIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFG  180 (412)
T ss_dssp             HHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG
T ss_pred             HHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCc
Confidence            5544    3347999999874      3899999997 689999999999999999999999999988 99999999998


Q ss_pred             CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~  298 (334)
                      .+.......    ..+.++++.|+||.++.+|.|+|++++.
T Consensus       181 ~~~~~~~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~  217 (412)
T 2cb1_A          181 AAGALCRPL----AWGAHVVVESLTKWASGHGSVLGGAVLS  217 (412)
T ss_dssp             TTTTSCCGG----GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             cccccCCcc----ccCCeEEEECCcccccCCCCcEEEEEEe
Confidence            762211111    2356799999999999899999999863

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.89  E-value=1.4e-22  Score=193.58  Aligned_cols=199  Identities=16%  Similarity=0.138  Sum_probs=150.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCC--------C--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP--------D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp--------~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+.+.|+.+.+. ++|+.+.+++.+ +.....++        .  ....++++++++++|+++++|++|+|+++++..++
T Consensus        27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al  105 (416)
T 1qz9_A           27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  105 (416)
T ss_dssp             TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence            346888888776 556777777765 32211111        1  23578999999999998899999999999999888


Q ss_pred             HHhc------CCCCE-EEEcCCCChhHHHH----HHHC--CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          164 RCVL------DPGDK-IVDCPPTFTMYEFD----AAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       164 ~~l~------~~gd~-Vl~~~p~y~~~~~~----~~~~--G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      ..++      ++||+ |+++.++|+.+...    ++..  |++++.++.       +++++++++ +++++|++++|+||
T Consensus       106 ~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~-~~~~~v~~~~~~np  177 (416)
T 1qz9_A          106 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID-QDTAVVMLTHVNYK  177 (416)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS-TTEEEEEEESBCTT
T ss_pred             HhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC-CCceEEEEeccccC
Confidence            8776      89987 55556688865443    2334  999999875       678888887 58999999999999


Q ss_pred             cccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccch-heeEcCHHHHHHHHH
Q 019868          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWR  307 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~  307 (334)
                      ||.+++.+++.++++. ++++|+||+|..... +...   ...+..+++.|++|.++ +|.|+ ||+++++++++.+..
T Consensus       178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~---~~~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~  251 (416)
T 1qz9_A          178 TGYMHDMQALTALSHECGALAIWDLAHSAGAV-PVDL---HQAGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQ  251 (416)
T ss_dssp             TCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-CCCH---HHHTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCC
T ss_pred             cccccCHHHHHHHHHHcCCEEEEEccccccCc-CCCh---hhcCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCC
Confidence            9999999999999988 999999999974221 1111   11234589999999864 68888 999999888765543

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.88  E-value=2.4e-22  Score=193.76  Aligned_cols=192  Identities=17%  Similarity=0.125  Sum_probs=156.8

Q ss_pred             HHHHHHHhcC---------cCCCCCCCcChHHHHHHHHHhcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-
Q 019868          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP-  177 (334)
Q Consensus       111 ~~v~~al~~~---------~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~---t~G~~~~i~~~~~~l~~~gd~Vl~~~-  177 (334)
                      +.|.+++.+.         ..++.|++.+..+|++.+|+++|.+.  .++   ++|+++++..++.++++|||+|++++ 
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~  124 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICG  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSS
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            5677777652         12356778888999999999999754  355   77888999999999999999999999 


Q ss_pred             CCChhHHHH-----------HHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeC----CCCccccCCcHHHHH
Q 019868          178 PTFTMYEFD-----------AAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLL  241 (334)
Q Consensus       178 p~y~~~~~~-----------~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~----p~NPtG~~~~~~~l~  241 (334)
                      |.|..+...           ++..|++++.++. +++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.
T Consensus       125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~  203 (427)
T 3hvy_A          125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEII  203 (427)
T ss_dssp             SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHH
T ss_pred             CCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHH
Confidence            999877633           3457999999997 6788999999999974 5899999998    999999999999999


Q ss_pred             HHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHhc
Q 019868          242 KILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       242 ~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~  309 (334)
                      ++++.   ++++|+|++|..+.....+..    .+.+++++|+||.+|.+| .+.||+++++++++.+....
T Consensus       204 ~ia~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~  271 (427)
T 3hvy_A          204 KSIREVNENVIVFVDNCYGEFVEEKEPTD----VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRV  271 (427)
T ss_dssp             HHHHHHCSSSEEEEECTTCTTTSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHhCCCCEEEEECCccccccCCCCcc----cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHh
Confidence            99986   899999999988763323222    234599999999988555 56799999999999998754

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.88  E-value=2.5e-22  Score=189.31  Aligned_cols=208  Identities=16%  Similarity=0.170  Sum_probs=167.2

Q ss_pred             CHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHH
Q 019868          110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (334)
Q Consensus       110 ~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (334)
                      ++++.+++.+. .....++.++..++|+++|++++.+  ++++++|+++++..++.++ +++||+|+++.++|..+...+
T Consensus        15 ~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~   92 (367)
T 3nyt_A           15 KDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV   92 (367)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH
Confidence            46677777653 3323346778899999999999975  8999999999999999998 899999999999999999999


Q ss_pred             HHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCC
Q 019868          188 AVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (334)
Q Consensus       188 ~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~  264 (334)
                      ...|++++.++.+. ++.+|+++++++++ +++++|+   |+||||...+.+++.++++. ++++|+|++|..+. +.+.
T Consensus        93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~  168 (367)
T 3nyt_A           93 ALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK  168 (367)
T ss_dssp             HHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE
T ss_pred             HHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe
Confidence            99999999999654 48999999999996 6888888   88999999999999999987 99999999998543 2222


Q ss_pred             chhhhcCCCcEEEEcCC--chhhcccccchheeEc-CHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhc
Q 019868          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~--------------~~~~~~~~q~aa~~~L~  327 (334)
                      .....   + .+++.||  +|.+|.+|. .|++++ ++++++.+.....              .+..+.+.++++...++
T Consensus       169 ~~~~~---~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~  243 (367)
T 3nyt_A          169 RSCNL---S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE  243 (367)
T ss_dssp             ETTSS---S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred             eccCC---C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence            22111   1 4888897  899986576 889888 5788888876554              25577888887777766


Q ss_pred             C
Q 019868          328 N  328 (334)
Q Consensus       328 ~  328 (334)
                      .
T Consensus       244 ~  244 (367)
T 3nyt_A          244 I  244 (367)
T ss_dssp             T
T ss_pred             H
Confidence            4

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.88  E-value=3.9e-22  Score=193.07  Aligned_cols=231  Identities=17%  Similarity=0.176  Sum_probs=163.3

Q ss_pred             CCCCeeecCCCC--CCCCC-CHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           93 KPEDIVKIDANE--NPYGP-PPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ++..++|+..+.  ++++. +|++.+++.+ +...    . .|+.....++++.++++++.++++|++++|+++++..++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al  127 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAV  127 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHH
Confidence            456688987664  45543 7899998876 3321    1 455555678999999999888899999999999999999


Q ss_pred             HHhcC--------CCCEEEEcCCCChhHHH-HHHHCCC------------eEEEeeCCCCC-----CCC--------HHH
Q 019868          164 RCVLD--------PGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSDF-----SLN--------VEL  209 (334)
Q Consensus       164 ~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~G~------------~v~~v~~~~~~-----~~d--------~~~  209 (334)
                      +.+..        +||+|++.+|+|..+.. .....|.            .+..++.+..+     ++|        +++
T Consensus       128 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~  207 (449)
T 3a8u_X          128 KMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE  207 (449)
T ss_dssp             HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence            87764        67999999999986543 3444331            23444422111     256        999


Q ss_pred             HHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEc
Q 019868          210 IADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (334)
Q Consensus       210 l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~  279 (334)
                      +++++++   +++++|+++..+|+||.+.+    .+++.++++. ++++|+||+|.+|...+..  ....+...+++   
T Consensus       208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~---  284 (449)
T 3a8u_X          208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM---  284 (449)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---
T ss_pred             HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE---
Confidence            9998863   24555554433578998777    7777777776 9999999999877643321  22222223333   


Q ss_pred             CCchhhcccc-cchheeEcCHHHHHHHHHhc-----------CCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAK-----------QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~-----------~~~~~~~~~q~aa~~~L~  327 (334)
                      ||||.++ +| +|+||+++++++++.+.+..           ..++.++++++++.++|+
T Consensus       285 s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~  343 (449)
T 3a8u_X          285 CIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC  343 (449)
T ss_dssp             EECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH
T ss_pred             EEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH
Confidence            8999998 57 99999999999999887641           236789999999988886

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.88  E-value=2.3e-23  Score=195.69  Aligned_cols=214  Identities=14%  Similarity=0.076  Sum_probs=154.5

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcC-----------CCCCCCc--ChHHHHHHHHHhcCCCCC-C-EEEeCCHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELID  160 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~Yp~~--g~~~lr~~lA~~~~~~~~-~-I~~t~G~~~~i~  160 (334)
                      ++.+..+  +.++|+.+++++.+ +..           .++|+..  -..++|+.+++++|++++ + |++|+|+++++.
T Consensus         5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~   82 (362)
T 2c0r_A            5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   82 (362)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence            4555544  57888999999876 321           2233332  246789999999999764 6 467899999999


Q ss_pred             HHHHHhcCCCCEEEEcCCC-ChhH-HHHHHHCCCeEEEeeCC--CCCC--CCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          161 LIMRCVLDPGDKIVDCPPT-FTMY-EFDAAVNGAAVVKVPRK--SDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~-y~~~-~~~~~~~G~~v~~v~~~--~~~~--~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      .++.+++++||+|+++++. |..+ ...++..| +++.++.+  ++++  +|.++++  ++ +++|+|++++|+||||.+
T Consensus        83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~~n~tG~~  158 (362)
T 2c0r_A           83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSNETIEGAQ  158 (362)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESEETTTTEE
T ss_pred             HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCCcCcccee
Confidence            9999999999999988765 4432 35666779 99988854  2233  4665543  54 689999999999999997


Q ss_pred             CcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh------
Q 019868          235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------  308 (334)
Q Consensus       235 ~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~------  308 (334)
                      ++  ++++|  .++++|+|++|..+.....    +.+.  .+++.|+||.||++|  +||+++++++++.+.+.      
T Consensus       159 ~~--~l~~i--~~~~vivD~a~~~~~~~~~----~~~~--d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~  226 (362)
T 2c0r_A          159 FK--AFPDT--GSVPLIGDMSSDILSRPFD----LNQF--GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLR  226 (362)
T ss_dssp             CS--SCCCC--TTSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGC
T ss_pred             cc--ccccc--CCCEEEEEChhhccCCccc----hhHC--cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHh
Confidence            54  23333  4899999999986643211    2222  488889999999888  99999998887655431      


Q ss_pred             --------cCCCCCcHHHHHHHHHHhcC
Q 019868          309 --------KQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       309 --------~~~~~~~~~~q~aa~~~L~~  328 (334)
                              ...++++.+.|.++.++|+.
T Consensus       227 ~~~~~~~~~~~~t~~~~~~~a~~~al~~  254 (362)
T 2c0r_A          227 YDTYVKNNSLYNTPPSFGIYMVNEVLKW  254 (362)
T ss_dssp             HHHHHHTTTCSSCCCHHHHHHHHHHHHH
T ss_pred             HHHHhhccCcCCCchHHHHHHHHHHHHH
Confidence                    22367888889888888863

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.88  E-value=5.3e-23  Score=192.67  Aligned_cols=205  Identities=16%  Similarity=0.028  Sum_probs=152.0

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE--
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~--  172 (334)
                      ..+.+..++++++++|++.+++.+......| ++++..+|+++++++++.+..  ++++|+++++..++++++.+||+  
T Consensus        14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~--i~~~~g~~a~~~a~~~~~~~g~~~v   91 (359)
T 3pj0_A           14 PYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQSA--VFFPSGTMAQQIALRIWADRKENRR   91 (359)
T ss_dssp             SEESSSSSCCBHHHHHHHTTTSCTTCBCCBTTBSHHHHHHHHHHHHHHTCSEE--EEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred             chhhcCCCccccCCCHHHHHHHHhhcccCcccCCHHHHHHHHHHHHHhCCCcE--EEeCCHHHHHHHHHHHHHhcCCCcE
Confidence            4577778899999899999998763222345 677889999999999997543  44577788999999998888886  


Q ss_pred             EEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc-ccCCcHHHHHHHHhC--
Q 019868          173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM--  246 (334)
Q Consensus       173 Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~--  246 (334)
                      |+++.+.|..+.   ......|++++.++. +++.+|+++++++ . +++++|++++||||+ |.+++.+++++|++.  
T Consensus        92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~  168 (359)
T 3pj0_A           92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCH  168 (359)
T ss_dssp             EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S-SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred             EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c-CCceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence            555555544321   122456999999986 5678999999998 4 689999999999998 799999999666653  


Q ss_pred             --CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          247 --PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       247 --~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                        ++++|+|++|..+..   ........ . ...+++.||||.++.++ + ||++.++++++.+.+.+
T Consensus       169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~-~-~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~  232 (359)
T 3pj0_A          169 EQGISLHLDGARLWEITPFYQKSAEEIC-A-LFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWK  232 (359)
T ss_dssp             HHTCEEEEEETTCGGGHHHHTCCHHHHH-T-TCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHH
T ss_pred             HcCCEEEEECcchhcchhhhCCCHHHhh-c-cCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHH
Confidence              999999999875541   11222222 1 22355679999887553 2 88889999999887643

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.88  E-value=2.9e-22  Score=194.25  Aligned_cols=188  Identities=16%  Similarity=0.200  Sum_probs=150.9

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~  202 (334)
                      +++...++|+++|+++|.+ +.|++++|+ +++..++.+++++||+|+++.+.|..+...    ++..|++++.++.+  
T Consensus       112 ~~~~~~~l~~~lA~l~g~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--  187 (445)
T 1qgn_A          112 GNPTTVVLEEKISALEGAE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA--  187 (445)
T ss_dssp             CCHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS--
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC--
Confidence            4556779999999999975 567777666 999999999999999999999999876654    44579999999753  


Q ss_pred             CCCCHHHHHHhcccCCc-eEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868          203 FSLNVELIADAVEREKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~-~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S  280 (334)
                         |+++++++++ +++ ++|++++|+||||.+.+.+++.++++. ++++|+|++|..+.... ..    ..+.+++++|
T Consensus       188 ---d~~~l~~ai~-~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-~~----~~g~Div~~S  258 (445)
T 1qgn_A          188 ---DVGALELALN-QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-AL----ALGADLVLHS  258 (445)
T ss_dssp             ---CHHHHHHHHH-HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-TT----TTTCSEEEEC
T ss_pred             ---CHHHHHHHhc-cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-cc----ccCCEEEEEC
Confidence               8999999997 467 999999999999999999999999987 99999999998654211 11    2345699999


Q ss_pred             Cchhhcccc-cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          281 FSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       281 ~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      ++|.+|..| .|+||+++++++++.+......  ...+++..+++...|+
T Consensus       259 ~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~  308 (445)
T 1qgn_A          259 ATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK  308 (445)
T ss_dssp             TTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG
T ss_pred             CcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH
Confidence            999988555 4799999999999888765543  2356666666666655

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.88  E-value=1e-21  Score=187.14  Aligned_cols=190  Identities=15%  Similarity=0.113  Sum_probs=150.9

Q ss_pred             HHHHHHHhc-CcCCCCCCCcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHH
Q 019868          111 PEVREALGQ-LKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFD  186 (334)
Q Consensus       111 ~~v~~al~~-~~~~~~Yp~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~  186 (334)
                      +++.+++.+ +.. ..|+..|  ..++|+++|++++.  ++|++++|+++++..++.++ +++||+|+++.|+|..+...
T Consensus        12 ~~v~~a~~~~~~~-~~~~~~g~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~   88 (394)
T 1o69_A           12 GNELKYIEEVFKS-NYIAPLGEFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAP   88 (394)
T ss_dssp             CCHHHHHHHHHHH-TTTSCTTHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHH
T ss_pred             HHHHHHHHHHHHc-CCccCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH
Confidence            445566554 222 2234345  88999999999986  68999999999999999999 89999999999999999999


Q ss_pred             HHHCCCeEEEeeCCCCCCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCC
Q 019868          187 AAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGL  262 (334)
Q Consensus       187 ~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~  262 (334)
                      ++..|++++.++.++++.+|++++++++++.  ++++|++++   |||...+.+++.++++. ++++|+||+|. ++.+.
T Consensus        89 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~  165 (394)
T 1o69_A           89 ICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYK  165 (394)
T ss_dssp             HHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred             HHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeC
Confidence            9999999999997777889999999998742  689999885   89999999999999987 99999999998 44432


Q ss_pred             CCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcC
Q 019868          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ  310 (334)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~  310 (334)
                      +......  .+  +.+.||||..+++|.|+||++++ +++++.+.....
T Consensus       166 ~~~~~~~--~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~  210 (394)
T 1o69_A          166 NKALGTF--GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYST  210 (394)
T ss_dssp             TEETTSS--SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTB
T ss_pred             Ccccccc--cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHH
Confidence            2111111  12  55666654445668899999995 899988877644

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.88  E-value=5.1e-23  Score=198.24  Aligned_cols=231  Identities=16%  Similarity=0.160  Sum_probs=163.3

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++++++|+..|.  ++++ .+|++.+++.+ +.  ..+.||+....+|+++++++++ .+++|++++|+++++..+++.
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~  128 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRL  128 (429)
T ss_dssp             TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHH
Confidence            4577899998774  5676 58999988875 32  2245788888999999999997 678999999999999999987


Q ss_pred             hcC--CCCEEEEcCCCChhHHHHHHH-CCCeE--EEeeCCCCCC------------CCHHHHHHhccc--CCceEEEEeC
Q 019868          166 VLD--PGDKIVDCPPTFTMYEFDAAV-NGAAV--VKVPRKSDFS------------LNVELIADAVER--EKPKCIFLTS  226 (334)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~-~G~~v--~~v~~~~~~~------------~d~~~l~~~l~~--~~~~~i~l~~  226 (334)
                      +..  ++++|++.+|+|..+...+.. .|..+  ..++....+.            -|++++++++++  +++++|+++.
T Consensus       129 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep  208 (429)
T 3k28_A          129 ARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP  208 (429)
T ss_dssp             HHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             HHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence            653  678999999999754433222 22111  1122111110            178999988863  3455666555


Q ss_pred             CCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       227 p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ++|++|.+.+    .+++.++++. ++++|+||+|.+| ..+...  ...+....   +.+|||.|+ .|+|+||+++++
T Consensus       209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~  283 (429)
T 3k28_A          209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD---LTCLGKVIG-GGLPVGAYGGKA  283 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS---EEEECGGGG-TTSCCEEEEECH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc---eehhhhhhc-CCCCeEEEEEcH
Confidence            5667777776    6667777766 9999999999988 433221  11222222   347999998 599999999999


Q ss_pred             HHHHHHHHh-----cCCCCCcHHHHHHHHHHhcC
Q 019868          300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       300 ~~i~~l~~~-----~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++.+.+.     ...++.++++++++.++|+.
T Consensus       284 ~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~  317 (429)
T 3k28_A          284 EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ  317 (429)
T ss_dssp             HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT
T ss_pred             HHHhhhccCCCccccCCCCCChHHHHHHHHHHHH
Confidence            999887652     23478999999999999985

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.88  E-value=1.2e-21  Score=184.24  Aligned_cols=190  Identities=17%  Similarity=0.124  Sum_probs=154.6

Q ss_pred             CCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCChhH
Q 019868          108 GPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMY  183 (334)
Q Consensus       108 ~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l---~~~gd~Vl~~~p~y~~~  183 (334)
                      ++++++++++.+ +.....+|.+...++|++++++++.+  ++++++|+++++..++.++   +++||+|+++.|+|..+
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~   87 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVAT   87 (375)
T ss_dssp             CCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHH
T ss_pred             CCCHHHHHHHHHHHHcCcccCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhH
Confidence            356888888876 33333346667889999999999976  8999999999999999999   89999999999999999


Q ss_pred             HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC
Q 019868          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL  262 (334)
Q Consensus       184 ~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~  262 (334)
                      ...+...|++++.++.++++.+|+++++++++ +++++|++++|   ||.+.+.+++.++++. ++++|+||+|..+...
T Consensus        88 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~  163 (375)
T 2fnu_A           88 ANMLLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEY  163 (375)
T ss_dssp             HHHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred             HHHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeE
Confidence            99999999999999976556799999999997 57899888776   9999999999999988 9999999999865421


Q ss_pred             CCchhhhcCCCcEEEEcCCc--hhhcccccchheeEc-C-HHHHHHHHHhc
Q 019868          263 ESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-P-LSIIEYLWRAK  309 (334)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~S--K~~gl~G~R~G~l~~-~-~~~i~~l~~~~  309 (334)
                      ..  ..+...+ .+++.|||  |.+|. |  +|++++ + +++++.+....
T Consensus       164 ~~--~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~  208 (375)
T 2fnu_A          164 QN--KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFR  208 (375)
T ss_dssp             TT--EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHT
T ss_pred             CC--eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHH
Confidence            11  1122222 48888888  98875 6  788887 4 77888877654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.88  E-value=1e-21  Score=186.56  Aligned_cols=220  Identities=16%  Similarity=0.083  Sum_probs=168.9

Q ss_pred             cCCCCCCCCCCHHHHHHHhc-CcCCCCCC-CcChHHHHHHH-HHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Q 019868          100 IDANENPYGPPPEVREALGQ-LKFPYIYP-DPESRRLRAAL-AKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVD  175 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~-~~~~~~Yp-~~g~~~lr~~l-A~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~  175 (334)
                      +..+++++++++++++++.+ +..+..++ .+...+|++++ |+++| ..+++++++|+++++..++.++ +++||+|++
T Consensus         5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~   83 (377)
T 3ju7_A            5 IPFLRASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALM   83 (377)
T ss_dssp             BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEE
T ss_pred             eeccCCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEE
Confidence            34568999999988888776 33333233 55688999999 99999 3567899999999999999988 899999999


Q ss_pred             cCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCC--ceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEE
Q 019868          176 CPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVL  252 (334)
Q Consensus       176 ~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~--~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIv  252 (334)
                      +.|+|..+...+...|++++.++.+ +++.+|++++++++.+++  +|+|+   |+||+|...+.+++.++++.+++||+
T Consensus        84 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~~~~~vi~  160 (377)
T 3ju7_A           84 PSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEKKGVPVVV  160 (377)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHHTTCCBEE
T ss_pred             CCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHhcCCEEEE
Confidence            9999999999999999999999965 578999999999883245  88887   78899999999999999987799999


Q ss_pred             ccCCcCccC-CCCchhhhcCCCcEEEEcCC--chhhcccccchheeEc-CHHHHHHHHHhcC--------------CCCC
Q 019868          253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNV  314 (334)
Q Consensus       253 Deay~~~~~-~~~~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~--------------~~~~  314 (334)
                      |++|..... ......  ... ..+.+.||  +|.++. | +.|++++ ++++++.++..+.              .+.+
T Consensus       161 D~a~a~g~~~~~~~~g--~~~-~d~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~  235 (377)
T 3ju7_A          161 DAAPGFGLMNGGMHYG--QDF-SGMIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM  235 (377)
T ss_dssp             ECTTCTTCEETTEETT--TTC-SSEEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred             ECCCccCCeECCEecc--CCC-CcEEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence            999975432 111110  000 12555555  698874 5 6788776 5688888876654              2446


Q ss_pred             cHHHHHHHHHHhcC
Q 019868          315 SVAAEVAACAALQN  328 (334)
Q Consensus       315 ~~~~q~aa~~~L~~  328 (334)
                      +.+.++++...|++
T Consensus       236 ~~~~aa~~~~~l~~  249 (377)
T 3ju7_A          236 SEYAAAIGIATMKK  249 (377)
T ss_dssp             CHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHH
Confidence            77777777776654

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.88  E-value=1.5e-22  Score=196.89  Aligned_cols=232  Identities=16%  Similarity=0.162  Sum_probs=162.3

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-CC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      .+++.++|+..|  .++++ .+|++++++.+ +. ..     ..|+.....++++.++++++.+.++|++++|+++++..
T Consensus        47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~  126 (459)
T 4a6r_A           47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT  126 (459)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence            356778999887  56666 46888888765 22 11     13455556789999999998888899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCC-----CCCCCC--------H
Q 019868          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRK-----SDFSLN--------V  207 (334)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~-----~~~~~d--------~  207 (334)
                      +++.+..        ++++|++.+|+|..+...+...+.             .+..++..     .++ .|        +
T Consensus       127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~  205 (459)
T 4a6r_A          127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA  205 (459)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence            9998775        579999999999877655544322             23333321     112 45        7


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCC-c---HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~  277 (334)
                      +++++.+++   +++++|+++.++|++|... +   .+++.++++. ++++|+||+|.+|...+...  ...+...++  
T Consensus       206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi--  283 (459)
T 4a6r_A          206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDL--  283 (459)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE--
T ss_pred             HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe--
Confidence            888888753   3445555544456666655 4   4555555555 99999999999886544221  222222333  


Q ss_pred             EcCCchhhcccccchheeEcCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~-----~~~~~~~~~~~q~aa~~~L~  327 (334)
                       .+|||.++..|+|+||+++++++++.+..     ....|+.++++|+++.++|+
T Consensus       284 -~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  337 (459)
T 4a6r_A          284 -FTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA  337 (459)
T ss_dssp             -EEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred             -eehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence             36899987555999999999999998873     22347899999999999997

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.88  E-value=5.7e-22  Score=188.15  Aligned_cols=202  Identities=15%  Similarity=0.153  Sum_probs=154.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCC
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPG  170 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~g  170 (334)
                      .+++++..+.++++  +++.+++.+. .. ..|  +.++..+||+++|++++.+  ++++++|+++++..++..+ +++|
T Consensus        22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~~g   96 (391)
T 3dr4_A           22 SDLPRISVAAPRLD--GNERDYVLECMDT-TWISSVGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIGPG   96 (391)
T ss_dssp             ------CCCCCCCC--SSHHHHHHHHHHH-TCCSSCSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCCTT
T ss_pred             CCCceeccCCCCCC--HHHHHHHHHHHHc-CCccCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCc
Confidence            46788888888765  5566666552 22 234  4567899999999999975  7888899999999999999 8999


Q ss_pred             CEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CC
Q 019868          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~  248 (334)
                      |+|+++.|+|..+...++..|++++.++.+ +++.+|+++++++++ +++++|+   |+||||...+.+++.++++. ++
T Consensus        97 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~  172 (391)
T 3dr4_A           97 DEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-PRTKAIM---PVHLYGQICDMDPILEVARRHNL  172 (391)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTC
T ss_pred             CEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-CCceEEE---EECCCCChhhHHHHHHHHHHcCC
Confidence            999999999999999999999999999965 678999999999997 6788888   67899999999999999987 99


Q ss_pred             eEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          249 LVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       249 ~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      ++|+|++|..+. +.+.......    .+.+.||||..+++|.+.||++++ +++++.+....
T Consensus       173 ~li~D~a~~~g~~~~~~~~~~~~----di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~  231 (391)
T 3dr4_A          173 LVIEDAAEAVGATYRGKKSGSLG----DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLR  231 (391)
T ss_dssp             EEEEECTTCTTCEETTEETTSSS----SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHH
T ss_pred             EEEEECcccccceECCeeecccC----CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHH
Confidence            999999998643 2221111111    277888773334456788999875 56777776554

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.88  E-value=6.7e-22  Score=191.03  Aligned_cols=225  Identities=15%  Similarity=0.133  Sum_probs=155.9

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..|  .++++ .+|++.+++.+ +...    ..|+.+...++++.++++++  .++|++++|+++++..++
T Consensus        62 ~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al  139 (433)
T 1z7d_A           62 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAY  139 (433)
T ss_dssp             TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHHH
Confidence            356678999875  45777 88999998875 3221    23444456789999999997  579999999999999999


Q ss_pred             HHhc---------CCC-CEEEEcCCCChhHHHH-HHHCC------------CeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          164 RCVL---------DPG-DKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       164 ~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +.+.         .+| |+|++.+|+|..+... ....|            ..++.+|.     .|+++++++++.++++
T Consensus       140 ~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~  214 (433)
T 1z7d_A          140 KLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNVC  214 (433)
T ss_dssp             HHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTEE
T ss_pred             HHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEE
Confidence            8653         467 9999999999765432 22223            24445543     2899999999535677


Q ss_pred             EEEEeCCCCccccCC----cHHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccc-cch
Q 019868          221 CIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRV  292 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~----~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G-~R~  292 (334)
                      +|+++..+|++|.+.    ..+++.++++. ++++|+||+|.+|...+...  ...+....+ +  ||||.+| +| +|+
T Consensus       215 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di-~--t~sK~l~-~G~~~~  290 (433)
T 1z7d_A          215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDV-I--LLGKALS-GGHYPI  290 (433)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE-E--EECGGGG-TTSSCC
T ss_pred             EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCE-E--EECcccc-CCCCCe
Confidence            777665567899865    45556666655 99999999998875433221  112222222 2  8999999 89 999


Q ss_pred             heeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          293 GYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       293 G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      ||+++++++++.+...  ...++.|+++++++.++|+
T Consensus       291 G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~  327 (433)
T 1z7d_A          291 SAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALN  327 (433)
T ss_dssp             EEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred             EEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHH
Confidence            9999999988876543  2337789999999988886

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.88  E-value=2.1e-22  Score=193.63  Aligned_cols=227  Identities=19%  Similarity=0.150  Sum_probs=163.6

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++++++|+..|.  ++++ .+|++.+++.+ +...  +.|+.....+|++.++++++ ++++|++++|+++++..+++.
T Consensus        49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~  127 (427)
T 3fq8_A           49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRI  127 (427)
T ss_dssp             TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            3567789998875  5666 58999988875 3322  33555567889999999998 788999999999999999953


Q ss_pred             hc--CCCCEEEEcCCCChhHHHHHHHC-CC-------------------eEEEeeCCCCCCCCHHHHHHhcccC--CceE
Q 019868          166 VL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------------AVVKVPRKSDFSLNVELIADAVERE--KPKC  221 (334)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~~~-G~-------------------~v~~v~~~~~~~~d~~~l~~~l~~~--~~~~  221 (334)
                      ..  ..+++|++.+|+|..+...+... |.                   .++.++..     |++++++++++.  ++++
T Consensus       128 a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~  202 (427)
T 3fq8_A          128 MRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAG  202 (427)
T ss_dssp             HHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEE
T ss_pred             HHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEE
Confidence            32  34588999999986543322111 11                   13333321     899999988642  5677


Q ss_pred             EEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868          222 IFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       222 i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      |+++.++|++|.+.+    .+++.++++. ++++|+||+|.+| ..+.... ....+...-+.||||.|+ +|+|+||++
T Consensus       203 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~-~~~~~~~~di~t~sK~~~-~G~~~G~~~  279 (427)
T 3fq8_A          203 VILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGV-QEKFGVTPDLTTLGKIIG-GGLPVGAYG  279 (427)
T ss_dssp             EEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHH-HHHTTCCCSEEEECGGGG-TTSSCEEEE
T ss_pred             EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchh-hHhcCCCCChhhhhhhhh-CCcceEEEE
Confidence            777777888999988    7788888876 9999999999988 4332211 111111122458999999 899999999


Q ss_pred             cCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhc
Q 019868          297 FPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       297 ~~~~~i~~l~~~-----~~~~~~~~~~q~aa~~~L~  327 (334)
                      +++++++.+.+.     ...++.++++++++.++|+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~  315 (427)
T 3fq8_A          280 GKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE  315 (427)
T ss_dssp             ECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             EcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHH
Confidence            999999888652     2346789999999999885

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.88  E-value=1.6e-22  Score=196.77  Aligned_cols=232  Identities=13%  Similarity=0.107  Sum_probs=162.7

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CC---CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FP---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~---~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      .+++++||+..|  .++++ .+|++++++.+ +.   ..   ..|+.....+|++.++++++.+.++|++++|+++++..
T Consensus        48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~  127 (460)
T 3gju_A           48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET  127 (460)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            356778999877  45665 45888888764 21   11   23445456789999999988788899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCC-----CCCCCC--------H
Q 019868          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRK-----SDFSLN--------V  207 (334)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~-----~~~~~d--------~  207 (334)
                      +++.+..        ++++|++.+|+|..+...+...+.             .+..++..     ++++.+        +
T Consensus       128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~  207 (460)
T 3gju_A          128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA  207 (460)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence            9998763        569999999999876655443221             34444422     222344        5


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCC-c---HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~  277 (334)
                      +++++++++   +++++|+++.++|++|... +   .+++.++++. ++++|+||+|.+|...+...  ...+....   
T Consensus       208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pd---  284 (460)
T 3gju_A          208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPD---  284 (460)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS---
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC---
Confidence            888888753   3566777766678888744 5   4555555555 99999999999886443221  12222222   


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +.+|||.++ .| +|+||+++++++++.+...         ...|+.++++|+++.++|+
T Consensus       285 i~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  343 (460)
T 3gju_A          285 LITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE  343 (460)
T ss_dssp             EEEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             eeeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence            336899987 45 8999999999999988632         2347899999999999997

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.88  E-value=1.9e-21  Score=186.47  Aligned_cols=196  Identities=17%  Similarity=0.153  Sum_probs=153.5

Q ss_pred             CCCCCCCC-CHHHHHHHhc-Cc-CC-CCCC-CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 019868          102 ANENPYGP-PPEVREALGQ-LK-FP-YIYP-DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD  171 (334)
Q Consensus       102 ~~~~~~~~-~~~v~~al~~-~~-~~-~~Yp-~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd  171 (334)
                      .|.+.+++ ++++++++.+ +. .. ..|+ ..|    ..++++.+++++|++  ++++++++++++..++.++ +++||
T Consensus         6 ~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd   83 (418)
T 2c81_A            6 DHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD   83 (418)
T ss_dssp             --CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence            34455544 6888888765 22 11 2253 334    688999999999976  4666677789999999998 89999


Q ss_pred             EEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCe
Q 019868          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (334)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~  249 (334)
                      +|+++.|+|..+...++..|++++.++.+. ++.+|+++++++++ +++++|++   +||||...+.+++.++++. +++
T Consensus        84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~  159 (418)
T 2c81_A           84 EVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-DKTKAIIP---VHLFGSMANMDEINEIAQEHNLF  159 (418)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-TTEEEECC---BCCTTCCCCHHHHHHHHHHTTCE
T ss_pred             EEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-CCCeEEEE---eCCcCCcccHHHHHHHHHHCCCE
Confidence            999999999999999999999999999654 78999999999997 57888885   4689999999999999987 999


Q ss_pred             EEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHHhc
Q 019868          250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (334)
Q Consensus       250 lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~~~  309 (334)
                      +|+||+|..+. ++.......   . .+++.||  ||.++. | |+||++++ +++++.+....
T Consensus       160 li~D~a~~~~~~~~~~~~~~~---~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~  217 (418)
T 2c81_A          160 VIEDCAQSHGSVWNNQRAGTI---G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLR  217 (418)
T ss_dssp             EEEECTTCTTCEETTEETTSS---S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHH
T ss_pred             EEEECcccccCccCCEecccc---c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHH
Confidence            99999999875 332222111   1 2777788  999986 8 99999994 78888777543

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.88  E-value=3.6e-23  Score=193.69  Aligned_cols=214  Identities=12%  Similarity=0.052  Sum_probs=154.3

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcC-----------CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEEeCCH-HHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGA-DELID  160 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~t~G~-~~~i~  160 (334)
                      +++++.|.  .++|+.+++++.+ +..           .++|+..  ...++|+.+++++|++ +++|++++|+ ++++.
T Consensus         4 ~~~~~~g~--~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~   81 (360)
T 1w23_A            4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eEeecCCC--cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHH
Confidence            46666554  4778999999876 321           0112221  2568999999999986 5699999999 99999


Q ss_pred             HHHHHhcCC---CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHH-hcccCCceEEEEeCCCCccccCC
Q 019868          161 LIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       161 ~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~-~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      .++..++.+   ||.|+++.++|..+ ..++..| +++.++.+. ++.+|++++++ +++ +++|+|++++|+||||.++
T Consensus        82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-~~~k~v~~~~~~nptG~~~  158 (360)
T 1w23_A           82 MLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-ENDAYLHITSNNTIYGTQY  158 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-TTEEEEEEESEETTTTEEC
T ss_pred             HHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCcCCccchHhhccC-CCCCEEEEeCCCCCcceec
Confidence            999988865   56677766666543 3456789 999998643 44578899988 885 6899999999999999998


Q ss_pred             cHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc------
Q 019868          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------  309 (334)
Q Consensus       236 ~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~------  309 (334)
                      +  ++.+  +.++++|+||+|..+.....    +...  .++++|+||.||++|  +||+++++++++.+.+..      
T Consensus       159 ~--~i~~--~~~~~li~D~a~~~~~~~~~----~~~~--di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~  226 (360)
T 1w23_A          159 Q--NFPE--INHAPLIADMSSDILSRPLK----VNQF--GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQY  226 (360)
T ss_dssp             S--SCCC--CCSSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCH
T ss_pred             c--cccc--cCCceEEEechhhcCCCCcC----cccC--CEEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhh
Confidence            7  3333  33999999999987653211    1122  389999999999666  899999998887654432      


Q ss_pred             -------CC-CCCcHHHHHHHHHHhc
Q 019868          310 -------QP-YNVSVAAEVAACAALQ  327 (334)
Q Consensus       310 -------~~-~~~~~~~q~aa~~~L~  327 (334)
                             .. .+.+..++.++.++|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~al~  252 (360)
T 1w23_A          227 ATHIKSDSLYNTPPTFSIYMLRNVLD  252 (360)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHH
T ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHH
Confidence                   11 2456666666666654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.87  E-value=2.5e-21  Score=187.38  Aligned_cols=225  Identities=13%  Similarity=0.085  Sum_probs=162.9

Q ss_pred             CCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..++|+..|.+  +++ .+|++.+++.+ +...    ..|+.+...++++.++++++  .++|++++|+++++..++
T Consensus        73 ~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al  150 (439)
T 2oat_A           73 VEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETAC  150 (439)
T ss_dssp             TTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHHH
Confidence            35677899988644  566 88999998875 3221    23444567899999999997  579999999999999999


Q ss_pred             HHhc---------CCC-CEEEEcCCCChhHHH-HHHHCC------------CeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          164 RCVL---------DPG-DKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       164 ~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +.+.         .+| |+|++.+|+|..+.. .....|            .+++.+|.     .|+++++++++.++++
T Consensus       151 ~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~  225 (439)
T 2oat_A          151 KLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNVA  225 (439)
T ss_dssp             HHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTEE
T ss_pred             HHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEE
Confidence            8764         357 899999999976533 333334            45666653     2899999999535677


Q ss_pred             EEEEeCCCCccccCC----cHHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccc-cch
Q 019868          221 CIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRV  292 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~----~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G-~R~  292 (334)
                      +|+++..+|++|.+.    ..+++.++++. ++++|+||+|.+|...+...  ...+.... ++  ||||.++ +| +|+
T Consensus       226 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~D-i~--t~sK~l~-~G~~~~  301 (439)
T 2oat_A          226 AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPD-IV--LLGKALS-GGLYPV  301 (439)
T ss_dssp             EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS-EE--EECGGGG-TTSSCC
T ss_pred             EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCc-EE--Eeccccc-CCCCCe
Confidence            777655567799765    45666666665 99999999998776433221  12222223 32  8999998 68 999


Q ss_pred             heeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868          293 GYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       293 G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      ||+++++++++.+...  ...++.|+++++++.++|+
T Consensus       302 G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~  338 (439)
T 2oat_A          302 SAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALE  338 (439)
T ss_dssp             EEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             EEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHH
Confidence            9999999988877542  2347789999998888876

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.87  E-value=4.4e-22  Score=193.73  Aligned_cols=231  Identities=13%  Similarity=0.161  Sum_probs=166.0

Q ss_pred             CCC--CeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPE--DIVKIDAN--ENPYG-PPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~--~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +++  .+||+..|  .+.++ .+|++.+++.+ +.   ..  ..|+.....+|++.++++++...++|++++|+++++..
T Consensus        71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~  150 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEV  150 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred             CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHH
Confidence            667  78999876  56666 57888888765 22   11  23455567899999999998878899999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCChhHHHHHHHCCC--------------eEEEee--CCCCCCCCHHHHHHhccc-
Q 019868          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA--------------AVVKVP--RKSDFSLNVELIADAVER-  216 (334)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~G~--------------~v~~v~--~~~~~~~d~~~l~~~l~~-  216 (334)
                      +++.+..       +| ++|++.+++|..+...+...+.              .+..++  .......|++++++++++ 
T Consensus       151 Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~  230 (457)
T 3tfu_A          151 AAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH  230 (457)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC
Confidence            9997764       55 5899999999766554444311              222222  211112478999988863 


Q ss_pred             -CCceEEEEeC-CCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcc
Q 019868          217 -EKPKCIFLTS-PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       217 -~~~~~i~l~~-p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl  287 (334)
                       +++++|+++. ++|++|.+.+    .+++.++++. ++++|+||+|.+|...+..  ....+...+++   ||||.++ 
T Consensus       231 ~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii---t~sK~l~-  306 (457)
T 3tfu_A          231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALT-  306 (457)
T ss_dssp             GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-
T ss_pred             CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE---EEChhhh-
Confidence             4677888887 8999998875    5556666665 9999999999988654332  12222233333   8999876 


Q ss_pred             cc-cchheeEcCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhc
Q 019868          288 AG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G-~R~G~l~~~~~~i~~l~~-------~~~~~~~~~~~q~aa~~~L~  327 (334)
                      .| +|+||+++++++++.+..       ....++.|+++++++.++|+
T Consensus       307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~  354 (457)
T 3tfu_A          307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVE  354 (457)
T ss_dssp             TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHH
Confidence            35 799999999999998862       12347889999999999886

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.86  E-value=7.3e-21  Score=185.85  Aligned_cols=224  Identities=14%  Similarity=0.092  Sum_probs=163.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCC----CcCh----HHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYP----DPES----RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp----~~g~----~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      .++.|+ +..+. ..|++.+++.+ ....+.|+    ..|.    .++++.+++++|++. .+++++|+++++...+.++
T Consensus        67 ~~~~lg-~~~~~-~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~  143 (474)
T 1wyu_B           67 TFYPLG-SCTMK-YNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILII  143 (474)
T ss_dssp             SCCCBT-TTCCC-CCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHH
T ss_pred             Cccccc-ccccc-CCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHH
Confidence            457777 44332 23455555543 22223342    2233    456666777778764 4678899999998755543


Q ss_pred             ----cCCCC-----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-Cc
Q 019868          167 ----LDPGD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-IN  236 (334)
Q Consensus       167 ----~~~gd-----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~  236 (334)
                          .++||     +|+++.|.|+.+...++..|++++.++.++++.+|+++++++++ +++++|++++| ||||.+ -+
T Consensus       144 ~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-~~t~~v~~~~p-n~~G~~~~~  221 (474)
T 1wyu_B          144 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNP-NTLGLFERR  221 (474)
T ss_dssp             HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSS-CTTSCCCTT
T ss_pred             HHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-CCceEEEEECC-CCCcccCCC
Confidence                35887     99999999999999999999999999987778999999999997 67999999998 589998 58


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc-c---cchheeEcCHHHHHHHHH-h--
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-G---LRVGYGAFPLSIIEYLWR-A--  308 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~-G---~R~G~l~~~~~~i~~l~~-~--  308 (334)
                      .+++.++++. ++++|+||+|..+..+....   ...+.++++.|++|.|+.+ |   +|+||+++++++++.+.. .  
T Consensus       222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~  298 (474)
T 1wyu_B          222 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVE  298 (474)
T ss_dssp             HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEE
T ss_pred             HHHHHHHHHHcCCEEEEeCchhhhhccCCCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeee
Confidence            9999999987 99999999997655321111   1224568999999999776 4   599999999988776541 0  


Q ss_pred             ------------------cCCCCCcHHHHHHHHHHhc
Q 019868          309 ------------------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       309 ------------------~~~~~~~~~~q~aa~~~L~  327 (334)
                                        ...++.+.+++.++...++
T Consensus       299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~  335 (474)
T 1wyu_B          299 RGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIR  335 (474)
T ss_dssp             ECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHH
T ss_pred             ccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHH
Confidence                              0113467788888888775

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.86  E-value=2.7e-21  Score=185.95  Aligned_cols=188  Identities=10%  Similarity=0.051  Sum_probs=148.7

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCC
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKS  201 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~  201 (334)
                      |+++...++++.+|+++|.+  ++++++|+++++..++.+++++||+|+++.+.|......+    +..|+++..++.+ 
T Consensus        79 ~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-  155 (415)
T 2fq6_A           79 RGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-  155 (415)
T ss_dssp             TCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred             CCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-
Confidence            45566789999999999964  5677788899999999999999999999999998766544    3479999998742 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                          |+++++++++ +++++|++++|+||||.+++.+++.++++.   ++++|+|++|..+.... +.    ..+.++++
T Consensus       156 ----d~~~le~ai~-~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~-p~----~~g~Div~  225 (415)
T 2fq6_A          156 ----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFK-AL----DFGIDVSI  225 (415)
T ss_dssp             ----CGGGGGGGCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSC-GG----GGTCSEEE
T ss_pred             ----CHHHHHHhhc-cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCC-cc----ccCCeEEE
Confidence                7899999997 689999999999999999999999999975   89999999998654321 22    23456999


Q ss_pred             cCCchhhcccccc-hheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHh
Q 019868          279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAAL  326 (334)
Q Consensus       279 ~S~SK~~gl~G~R-~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L  326 (334)
                      .|++|.+|.+|.+ +||+++++++++.+......  ...++..++++...+
T Consensus       226 ~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l  276 (415)
T 2fq6_A          226 QAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL  276 (415)
T ss_dssp             EETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             EeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence            9999999988865 59999988888777654432  334555555444444

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.86  E-value=1.8e-21  Score=187.05  Aligned_cols=223  Identities=17%  Similarity=0.110  Sum_probs=157.8

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC--CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++..+|||..|.  ++++ ++|++.+++.+ +..  .+.|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus        49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~  127 (424)
T 2e7u_A           49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRL  127 (424)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            3566789998775  4555 57899988875 332  234565557889999999986 678999999999999999885


Q ss_pred             ---hcCCCCEEEEcCCCChhHHHHHH--------------HCCC------eEEEeeCCCCCCCCHHHHHHhccc--CCce
Q 019868          166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (334)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~G~------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~  220 (334)
                         +. ++++|++.+|+|..+...+.              ..|.      +++.++.     .|++++++.+++  ++++
T Consensus       128 ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  201 (424)
T 2e7u_A          128 ARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIA  201 (424)
T ss_dssp             HHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEE
Confidence               44 45888999999986543221              1232      3455542     389999998863  2344


Q ss_pred             EEEEeCCCCc-cccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchh
Q 019868          221 CIFLTSPNNP-DGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (334)
Q Consensus       221 ~i~l~~p~NP-tG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G  293 (334)
                       +++++|+|+ ||.+.+    .+++.++ +. ++++|+||+|.+|..+... ....+...++   .||||.+| +|+|+|
T Consensus       202 -~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G  275 (424)
T 2e7u_A          202 -AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL---VTLGKILG-GGLPAA  275 (424)
T ss_dssp             -EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE---EEECGGGG-TTSSCE
T ss_pred             -EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch---hhhhhhhh-CCcceE
Confidence             455567655 898776    5666666 65 9999999999988322211 1122222332   38999999 599999


Q ss_pred             eeEcCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhc
Q 019868          294 YGAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       294 ~l~~~~~~i~~l~~~-----~~~~~~~~~~q~aa~~~L~  327 (334)
                      |+++++++++.+...     ...++.|+++++++.++|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  314 (424)
T 2e7u_A          276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLE  314 (424)
T ss_dssp             EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHH
T ss_pred             EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHH
Confidence            999999998877652     2246889999999998886

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.86  E-value=1.1e-21  Score=190.20  Aligned_cols=232  Identities=15%  Similarity=0.156  Sum_probs=153.3

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+++.++|+..|  .+.++ .+|++.+++.+ +...     ..|+.+...++++.++++++...++|++++|+++++..+
T Consensus        41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~a  120 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIA  120 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHH
Confidence            356778999876  44454 46888888775 3322     223334456788888888877778999999999999999


Q ss_pred             HHHhcC----CC----CEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCCCCCCC-----------CHHHH
Q 019868          163 MRCVLD----PG----DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSL-----------NVELI  210 (334)
Q Consensus       163 ~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~-----------d~~~l  210 (334)
                      ++.+..    +|    |+|++.+|+|..+...+...+.             .+..++..+.+..           |++++
T Consensus       121 l~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l  200 (448)
T 3dod_A          121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL  200 (448)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence            998765    44    9999999999876644433322             2233443333332           48889


Q ss_pred             HHhcc--cCCceEEEEeCCC-CccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcC
Q 019868          211 ADAVE--REKPKCIFLTSPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRT  280 (334)
Q Consensus       211 ~~~l~--~~~~~~i~l~~p~-NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S  280 (334)
                      +++++  .+++++|+++.++ |++|...+    .+++.++++. ++++|+||+|.+|...+...  ...+....   +.+
T Consensus       201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---i~t  277 (448)
T 3dod_A          201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---LMA  277 (448)
T ss_dssp             HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred             HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC---EEE
Confidence            98886  2456677776666 88886654    5556666655 99999999999886433321  11111222   336


Q ss_pred             Cchhhcccc-cchheeEcCHHHHHHHHH-------h--cCCCCCcHHHHHHHHHHhc
Q 019868          281 FSKRAGLAG-LRVGYGAFPLSIIEYLWR-------A--KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       281 ~SK~~gl~G-~R~G~l~~~~~~i~~l~~-------~--~~~~~~~~~~q~aa~~~L~  327 (334)
                      |||.++ .| +|+||+++++++++.+.+       .  ...++.++++++++.++|+
T Consensus       278 ~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  333 (448)
T 3dod_A          278 AGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA  333 (448)
T ss_dssp             ECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             eccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence            899998 59 599999999999998865       2  2347889999999999986

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.86  E-value=1.8e-21  Score=187.51  Aligned_cols=226  Identities=18%  Similarity=0.133  Sum_probs=158.7

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC--CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .++..++|+..|.  ++++ .+|++.+++.+ +..  .+.|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus        53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~  131 (434)
T 2epj_A           53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRL  131 (434)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            3566789998875  4555 67889988875 322  245666567889999999986 578999999999999999986


Q ss_pred             h--cCCCCEEEEcCCCChhHHHHHH--------------HCCC------eEEEeeCCCCCCCCHHHHHHhccc--CCceE
Q 019868          166 V--LDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPKC  221 (334)
Q Consensus       166 l--~~~gd~Vl~~~p~y~~~~~~~~--------------~~G~------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~  221 (334)
                      .  +.++++|++.+|+|..+...+.              ..|+      +++.++.     .|++++++++++  +++++
T Consensus       132 ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~  206 (434)
T 2epj_A          132 ARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIAG  206 (434)
T ss_dssp             HHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEEE
T ss_pred             HHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEEE
Confidence            1  3345788888899876433211              1232      3555553     289999998863  25666


Q ss_pred             EEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchhee
Q 019868          222 IFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       222 i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      |+++..+|+||.+.+    .+++.++++. ++++|+||+|.+|..+... ....+....   +.||||.++. |+|+||+
T Consensus       207 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d---i~s~sK~l~~-G~~~G~v  282 (434)
T 2epj_A          207 VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD---IIVLGKIIGG-GFPVGAV  282 (434)
T ss_dssp             EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS---EEEEEGGGGT-TSSCEEE
T ss_pred             EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC---eeeecchhcC-Ccceeee
Confidence            665544678999886    5566666665 9999999999987322211 111122222   3489999995 9999999


Q ss_pred             EcCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhc
Q 019868          296 AFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       296 ~~~~~~i~~l~~~-----~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++++++++.+...     ...|+.|+++++++.++|+
T Consensus       283 ~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~  319 (434)
T 2epj_A          283 AGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLK  319 (434)
T ss_dssp             EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             eecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence            9999998877652     1236789999999888876

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.86  E-value=1.9e-21  Score=187.10  Aligned_cols=230  Identities=16%  Similarity=0.139  Sum_probs=155.7

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .+++.++|+..+.  +.++ .+|++.+++.+ +...  +.||++...+|+++++++++ .+++|++++|+++++..+++.
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~~  128 (429)
T 4e77_A           50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIRL  128 (429)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHHH
Confidence            4567889998775  4565 57999998875 3322  44677778899999999997 688999999999999999985


Q ss_pred             hc--CCCCEEEEcCCCChhHHHHHHH-C--CCeEEEeeCCCCC------------CCCHHHHHHhcccC-CceEEEEeCC
Q 019868          166 VL--DPGDKIVDCPPTFTMYEFDAAV-N--GAAVVKVPRKSDF------------SLNVELIADAVERE-KPKCIFLTSP  227 (334)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~~-~--G~~v~~v~~~~~~------------~~d~~~l~~~l~~~-~~~~i~l~~p  227 (334)
                      ..  .++++|++.++.|..+...+.. .  |......+...+.            .-|++++++++++. +...+++++|
T Consensus       129 a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep  208 (429)
T 4e77_A          129 ARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEP  208 (429)
T ss_dssp             HHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECS
T ss_pred             HHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECC
Confidence            43  3568899999998765542211 1  1111111111110            11899999988642 2334555667


Q ss_pred             CCcc-ccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          228 NNPD-GSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       228 ~NPt-G~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +|++ |.+.+    .+++.++++. ++++|+||+|.+| ..+..  ....+....   +.||||.++ +|+|+||+++++
T Consensus       209 ~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~~~  283 (429)
T 4e77_A          209 VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGGRR  283 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEECH
T ss_pred             ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC---eeeeccccc-CCCCeEEEEECH
Confidence            6554 55555    6788888877 9999999999988 43221  111222222   348999999 899999999999


Q ss_pred             HHHHHHHHh-----cCCCCCcHHHHHHHHHHhc
Q 019868          300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       300 ~~i~~l~~~-----~~~~~~~~~~q~aa~~~L~  327 (334)
                      ++++.+...     ...|+.++++++++.++|+
T Consensus       284 ~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~  316 (429)
T 4e77_A          284 EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLT  316 (429)
T ss_dssp             HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCccccCCCCCCHHHHHHHHHHHH
Confidence            999887652     2347899999999999886

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.86  E-value=4e-21  Score=181.20  Aligned_cols=208  Identities=15%  Similarity=0.152  Sum_probs=160.0

Q ss_pred             CHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHH
Q 019868          110 PPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (334)
Q Consensus       110 ~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (334)
                      ++++.+++.+ +.....++.++..++|+++|++++.+  ++++++|+++++..++.++ +++||+|+++.|+|..+...+
T Consensus        16 ~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~   93 (373)
T 3frk_A           16 EYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV   93 (373)
T ss_dssp             HHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            3566666665 22222236678899999999999974  8999999999999999999 899999999999999999999


Q ss_pred             HHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCC
Q 019868          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (334)
Q Consensus       188 ~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~  264 (334)
                      +..|++++.++.+ +++.+|+++++++++ +++++|+   |+||||...+.+++.++++. ++++|+|++|..+.. ...
T Consensus        94 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~  169 (373)
T 3frk_A           94 SYTGAKPIFVEPDIRTYNIDPSLIESAIT-EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM  169 (373)
T ss_dssp             HHHSCEEEEECEETTTTEECGGGTGGGCC-TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             HHcCCEEEEEeccccccCcCHHHHHHhcC-CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE
Confidence            9999999999864 668899999999997 5788888   78899999999999999988 999999999986432 222


Q ss_pred             chhhhcCCCcEEEEcCCc--hhhcccccchheeEcC-HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhc
Q 019868          265 RMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       265 ~~~~~~~~~~~i~i~S~S--K~~gl~G~R~G~l~~~-~~~i~~l~~~~~--------------~~~~~~~~q~aa~~~L~  327 (334)
                      .....    ..+++.||+  |.++..| +.|+++++ +++++.+.....              .+..+.+.++++...++
T Consensus       170 ~~~~~----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~  244 (373)
T 3frk_A          170 KVGSL----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLK  244 (373)
T ss_dssp             ETTSS----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHH
T ss_pred             ecccc----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHH
Confidence            11111    238888877  8775324 47888885 567777765443              13356666666665554


Q ss_pred             C
Q 019868          328 N  328 (334)
Q Consensus       328 ~  328 (334)
                      .
T Consensus       245 ~  245 (373)
T 3frk_A          245 Y  245 (373)
T ss_dssp             T
T ss_pred             H
Confidence            4

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.86  E-value=4.9e-22  Score=194.23  Aligned_cols=232  Identities=15%  Similarity=0.192  Sum_probs=165.3

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-CC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      .+++++||+..|  .++++ .+|++++++.+ +. ..     ..|+.+...+|.+.++++++.+.++|++++|+++++..
T Consensus        52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~  131 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDT  131 (472)
T ss_dssp             TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Confidence            456788999877  56676 57899888765 22 11     23445556789999999998778899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCChhHHHHHHHCCC------------eEEEeeCCC-----CCCCC--------HH
Q 019868          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS-----DFSLN--------VE  208 (334)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~G~------------~v~~v~~~~-----~~~~d--------~~  208 (334)
                      +++.+..        ++++|++.+++|..+...+...+.            .+..++...     ++ .|        ++
T Consensus       132 aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~  210 (472)
T 3hmu_A          132 NIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARAR  210 (472)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHH
Confidence            9997764        468999999999877655544332            244444221     12 34        78


Q ss_pred             HHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEE
Q 019868          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (334)
Q Consensus       209 ~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i  278 (334)
                      ++++.+++   +++.+|+++.++|++|.+.+    .+++.++++. ++++|+||+|.+|...+...  ...+....++  
T Consensus       211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--  288 (472)
T 3hmu_A          211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM--  288 (472)
T ss_dssp             HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred             HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence            88887752   34566666666788888775    5666666665 99999999999986544321  1222223333  


Q ss_pred             cCCchhhcccccchheeEcCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~----~~~~~~~~~~~q~aa~~~L~  327 (334)
                       +|||.++..|+|+||+++++++++.+..    ....|+.|+++++++.++|+
T Consensus       289 -t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~  340 (472)
T 3hmu_A          289 -TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLR  340 (472)
T ss_dssp             -EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             -eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence             5899987555999999999999998831    11247899999999999987

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.86  E-value=6.3e-21  Score=182.22  Aligned_cols=219  Identities=16%  Similarity=0.115  Sum_probs=143.6

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCC--CCCC------CcC----hHH-HHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFP--YIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Yp------~~g----~~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.++|..++++.  +|++++++.+ +...  .+|+      ...    ..+ .++.++++++.+.. .++++|+++++..
T Consensus        33 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~v~~~~Gs~a~~~  109 (425)
T 3ecd_A           33 SQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA-NVQPHSGAQANGA  109 (425)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred             cceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc-eeecCchHHHHHH
Confidence            468898888766  7999999876 3221  2222      111    122 34667788887653 2457788889999


Q ss_pred             HHHHhcCCCCEEEEcCCCChh---HHHHHHHCCC--eEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTM---YEFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++.+++++||+|+++.|+|..   +.......|.  +++.++.+ +++.+|++++++.+++.++++|++++|+||  ...
T Consensus       110 al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~  187 (425)
T 3ecd_A          110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKL  187 (425)
T ss_dssp             HHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCC
T ss_pred             HHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcC
Confidence            999999999999999999987   3222223444  55566643 458899999999997557999999999996  567


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCCC
Q 019868          236 NDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY  312 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~~  312 (334)
                      +.+++.++++. |+++|+||+|. ++.+.+........  ..++++|+||.+  +|+|+||++++ +++.+.+.......
T Consensus       188 ~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~  263 (425)
T 3ecd_A          188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPG  263 (425)
T ss_dssp             CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCcc
Confidence            78999999987 99999999953 33322222222221  238899999986  68899999997 57777777655542


Q ss_pred             ---CCcHHHHHHHH
Q 019868          313 ---NVSVAAEVAAC  323 (334)
Q Consensus       313 ---~~~~~~q~aa~  323 (334)
                         +.+...+.++.
T Consensus       264 ~~~~~~~~~~~a~~  277 (425)
T 3ecd_A          264 LQGGPLMHVIAGKA  277 (425)
T ss_dssp             ---CCCHHHHHHHH
T ss_pred             ccCCccHHHHHHHH
Confidence               34444444333

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.86  E-value=1.5e-21  Score=189.64  Aligned_cols=233  Identities=13%  Similarity=0.152  Sum_probs=159.4

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~  161 (334)
                      .+++.+||+..|  .++++ .+|++++++.+ +...     ..|+.....+|++.++++++.. .++|++|+|+++++..
T Consensus        61 ~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~  140 (453)
T 4ffc_A           61 ADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVEN  140 (453)
T ss_dssp             TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHH
Confidence            456778999887  56676 47888888765 2211     1245555678999999988754 5799999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCChhHHHHHHHCCC--------------eEEEeeCC----CCCCCC--------HHHHHHh
Q 019868          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRK----SDFSLN--------VELIADA  213 (334)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~--------------~v~~v~~~----~~~~~d--------~~~l~~~  213 (334)
                      +++...  ..+++|++.+++|..+...+...+.              .+..++..    +.++.+        ++.+++.
T Consensus       141 alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~  220 (453)
T 4ffc_A          141 AIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQ  220 (453)
T ss_dssp             HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHh
Confidence            998654  2458999999999876655443221              34455532    223333        3556666


Q ss_pred             cccCCceEEEEeCCCCccc-cCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc
Q 019868          214 VEREKPKCIFLTSPNNPDG-SII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       214 l~~~~~~~i~l~~p~NPtG-~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl  287 (334)
                      +. .+..+++++.|+|++| .+. +.   +++.++++. ++++|+||+|.+|...+.... ....+....+.+|||.++.
T Consensus       221 i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a-~~~~~~~pdi~t~sK~~~~  298 (453)
T 4ffc_A          221 IG-AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFA-SEHEGIVPDIVTMAKGIAG  298 (453)
T ss_dssp             TC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST-HHHHTCCCSEEEECGGGGT
T ss_pred             cC-CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccch-hhhcCCCcchHhhhhhhcC
Confidence            64 3456677778877776 333 44   445555555 999999999998864332211 1111112224479999985


Q ss_pred             cccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          288 AGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                       |+|+||+++++++++.+.+..  ..++.|+++|+++.++|+
T Consensus       299 -G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~  339 (453)
T 4ffc_A          299 -GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALG  339 (453)
T ss_dssp             -TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             -CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence             999999999999998876443  347899999999999987

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.85  E-value=4.7e-21  Score=186.02  Aligned_cols=178  Identities=16%  Similarity=0.185  Sum_probs=136.5

Q ss_pred             CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCE---EEEcCCCChhHHHHHHHCCCeEE
Q 019868          124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDK---IVDCPPTFTMYEFDAAVNGAAVV  195 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~----~gd~---Vl~~~p~y~~~~~~~~~~G~~v~  195 (334)
                      ..| +.++..+||++++++++.  ++|++|+|+++++..+++++++    +||+   |+++.+.|..+...+...|++++
T Consensus        70 ~~y~~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~  147 (467)
T 1ax4_A           70 EAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAI  147 (467)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEE
T ss_pred             cccccCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCcee
Confidence            356 556789999999999985  6899999999999999999888    9998   99887777888888888999988


Q ss_pred             EeeCC----------CCCCCCHHHHHHhccc---CCceEEEEeCCCCcc-ccCCcHHHHHHHHhC----CCeEEEccCCc
Q 019868          196 KVPRK----------SDFSLNVELIADAVER---EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYT  257 (334)
Q Consensus       196 ~v~~~----------~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~----~~~lIvDeay~  257 (334)
                      .++..          .++.+|++++++++++   .++++|++++||||| |.+++.+++++|++.    |+++|+||++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~  227 (467)
T 1ax4_A          148 NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF  227 (467)
T ss_dssp             ECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred             cccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhh
Confidence            77531          1356899999999974   268999999999999 899998877777664    99999999864


Q ss_pred             C--c--------cCCCCchhhh-----cCCCcEEEEcCCchhhccc-ccchheeEcC-H-HHHHHHHHh
Q 019868          258 E--F--------SGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-GLRVGYGAFP-L-SIIEYLWRA  308 (334)
Q Consensus       258 ~--~--------~~~~~~~~~~-----~~~~~~i~i~S~SK~~gl~-G~R~G~l~~~-~-~~i~~l~~~  308 (334)
                      .  .        .+.+.....+     ...+  +++.|+||.+|++ |   ||++.+ + ++++.+.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~  291 (467)
T 1ax4_A          228 CENAYFIKARDPKYKNATIKEVIFDMYKYAD--ALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQR  291 (467)
T ss_dssp             HHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS--EEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHH
T ss_pred             hhcchhccccccccCCCchhhhhhhhccccc--eEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhh
Confidence            3  0        1112111111     1122  5668999998765 3   677777 6 888776544

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.85  E-value=1.5e-20  Score=181.54  Aligned_cols=181  Identities=17%  Similarity=0.150  Sum_probs=145.7

Q ss_pred             CCCCCcChHHHHHHHHHhcCCCCCC--EEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHHH----------HC
Q 019868          124 YIYPDPESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAA----------VN  190 (334)
Q Consensus       124 ~~Yp~~g~~~lr~~lA~~~~~~~~~--I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~~----------~~  190 (334)
                      +.|++.+..++++.+++++|.+...  ++++ |+++++..++.+++++||+|++++ |.|..+...+.          ..
T Consensus        60 ~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~  138 (431)
T 3ht4_A           60 YGYDDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY  138 (431)
T ss_dssp             TCCSCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG
T ss_pred             CCCChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHc
Confidence            5677777889999999999976442  3355 558999999999999999999998 99998886553          36


Q ss_pred             CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHh------CCCeEEEccCCcCccCCC
Q 019868          191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE------MPILVVLDEAYTEFSGLE  263 (334)
Q Consensus       191 G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~------~~~~lIvDeay~~~~~~~  263 (334)
                      |++++.++.++++.+|+++++++++ +++++|+++ +||||+|...+.+++++|++      .++++|+||+|..+....
T Consensus       139 G~~~~~v~~~~~~~~d~e~l~~~l~-~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~  217 (431)
T 3ht4_A          139 NIGYNAVPLTEGGLVDFEAVAAAIH-SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQ  217 (431)
T ss_dssp             TCEEEECCBCTTSSBCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSC
T ss_pred             CCEEEEeCCCCCCCcCHHHHHhhcC-CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCC
Confidence            9999999987778999999999997 689999999 59999999998888877764      279999999999887533


Q ss_pred             CchhhhcCCCcEEEEcCCchhhcc-cccchheeEcCHHHHHHHHHhcC
Q 019868          264 SRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQ  310 (334)
Q Consensus       264 ~~~~~~~~~~~~i~i~S~SK~~gl-~G~R~G~l~~~~~~i~~l~~~~~  310 (334)
                      .+...    +.+++++|+||.+|. .+...||+++++++++.+.....
T Consensus       218 ~~~~~----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~  261 (431)
T 3ht4_A          218 EPCHV----GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLT  261 (431)
T ss_dssp             CGGGT----TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHS
T ss_pred             Ccccc----CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhc
Confidence            32222    345999999998653 22444999999999999877443

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.85  E-value=6.6e-21  Score=184.72  Aligned_cols=224  Identities=15%  Similarity=0.148  Sum_probs=144.0

Q ss_pred             CCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH-
Q 019868           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (334)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~-  165 (334)
                      ++..+||+..+.  ++++ .+|++.+++.+ +...  +.|+..-..++.+.+++.++ ++++|++++|+++++..+++. 
T Consensus        55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~a  133 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRVA  133 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHHH
Confidence            456789998886  4454 67899988876 3322  23443334455555655555 678999999999999999987 


Q ss_pred             --hcCCCCEEEEcCCCChhHHHHHHH-----------CCC------eEEEeeCCCCCCCCHHHHHHhccc--CCceEEEE
Q 019868          166 --VLDPGDKIVDCPPTFTMYEFDAAV-----------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIFL  224 (334)
Q Consensus       166 --l~~~gd~Vl~~~p~y~~~~~~~~~-----------~G~------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l  224 (334)
                        +.++ ++|++.+|+|..+...+..           .|.      .++.++.     .|++++++++++  +++++|++
T Consensus       134 r~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~  207 (453)
T 2cy8_A          134 RAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFIA  207 (453)
T ss_dssp             HHHHCC-CEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEEE
T ss_pred             HHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEEE
Confidence              5554 6888888999865543221           132      1333332     389999998863  35566665


Q ss_pred             eCCCCccccCCc-H---HHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          225 TSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       225 ~~p~NPtG~~~~-~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      +..+||||.+.+ .   +++.++++. ++++|+||+|.+| ..+...  ...+....   +.||||.++ +|+|+||+++
T Consensus       208 ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d---i~s~sK~l~-~G~~~G~v~~  282 (453)
T 2cy8_A          208 EPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD---LTCLAKASA-GGLPGGILGG  282 (453)
T ss_dssp             CSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS---EEEEEGGGG-TTSSCEEEEE
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc---EEEEChhhh-CCcceEEEec
Confidence            444578998765 4   455555554 9999999999987 333211  11222222   238999998 5999999999


Q ss_pred             CHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhcC
Q 019868          298 PLSIIEYLWR-------AKQPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       298 ~~~~i~~l~~-------~~~~~~~~~~~q~aa~~~L~~  328 (334)
                      ++++++.+..       ....++.|+++++++.++|+.
T Consensus       283 ~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~  320 (453)
T 2cy8_A          283 REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDT  320 (453)
T ss_dssp             CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHH
Confidence            9998887654       122478899999999888864

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.85  E-value=4.1e-20  Score=179.24  Aligned_cols=189  Identities=15%  Similarity=0.038  Sum_probs=148.1

Q ss_pred             CCCHHHHHHHhc-CcC-CCCC-CCcChH----HHHHHHHHhcCCCCCC-----EEEeCCHHHHHHHHHHHhcC-------
Q 019868          108 GPPPEVREALGQ-LKF-PYIY-PDPESR----RLRAALAKDSGLESDH-----ILVGCGADELIDLIMRCVLD-------  168 (334)
Q Consensus       108 ~~~~~v~~al~~-~~~-~~~Y-p~~g~~----~lr~~lA~~~~~~~~~-----I~~t~G~~~~i~~~~~~l~~-------  168 (334)
                      .+++.+.+++.+ +.. ...| ..++..    ++++.+++++|++.++     +++|+|+++++.+++.++.+       
T Consensus        53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~  132 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME  132 (452)
T ss_dssp             CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            455788888875 322 2233 233433    5666678888988765     99999999999999887754       


Q ss_pred             -CC-----CEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868          169 -PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (334)
Q Consensus       169 -~g-----d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (334)
                       +|     ++|++++ +|..|...++..|++++.++.++ ++.+|+++++++++ +++++|++++|+||||.+.+.+++.
T Consensus       133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I~  210 (452)
T 2dgk_A          133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFGVTYTGNYEFPQPLH  210 (452)
T ss_dssp             HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBSCTTTCBBCCHHHHH
T ss_pred             hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHH
Confidence             55     5999999 99999999999999999999765 68999999999997 6789999999999999999999999


Q ss_pred             HHHhC-------CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          242 KILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       242 ~l~~~-------~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ++++.       ++++++|++|..+..   .+.....+....-.+++.+++| |+++|+|+||+++++
T Consensus       211 ~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~  277 (452)
T 2dgk_A          211 DALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRD  277 (452)
T ss_dssp             HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESS
T ss_pred             HHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcC
Confidence            99976       899999999998642   1211111112234567888999 778999999999954

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.85  E-value=5.4e-21  Score=182.42  Aligned_cols=206  Identities=17%  Similarity=0.108  Sum_probs=143.0

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcCC--CCCCC------cC-----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKFP--YIYPD------PE-----SRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Yp~------~g-----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+.+..+++.  .+|.+++++.+ +...  .+||.      ..     ....++.+++++++++++|++++| ++++..+
T Consensus        32 ~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~a  108 (420)
T 3gbx_A           32 HIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFAV  108 (420)
T ss_dssp             SEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHHH
T ss_pred             ceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHHH
Confidence            4777666665  58999999876 3221  23322      11     223456888889998888878777 6799999


Q ss_pred             HHHhcCCCCEEEEcCCCChhHH---HHHHH--CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          163 MRCVLDPGDKIVDCPPTFTMYE---FDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~---~~~~~--~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      +.+++++||+|+++.|+|..+.   .....  .+...+.++.++++.+|++++++++++.++++|++++|+||+  ..+.
T Consensus       109 ~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~l  186 (420)
T 3gbx_A          109 YTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVDW  186 (420)
T ss_dssp             HHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCCH
T ss_pred             HHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccCH
Confidence            9999999999999999997633   11112  334566666666788999999999975568999999999974  7889


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCc-cCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH---HHHHHHHHhcCC
Q 019868          238 EDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---SIIEYLWRAKQP  311 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~---~~i~~l~~~~~~  311 (334)
                      +++.++++. ++++|+||+|... ...+.......  ..+++++|+||.++  |.|.||+++++   ++.+.+......
T Consensus       187 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~  261 (420)
T 3gbx_A          187 AKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFP  261 (420)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCC
Confidence            999999987 9999999997533 22221111111  24599999999885  66679999987   888877765544

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.85  E-value=3.6e-20  Score=177.31  Aligned_cols=190  Identities=13%  Similarity=0.065  Sum_probs=149.3

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-----HHCCCeEEEeeC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPR  199 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~G~~v~~v~~  199 (334)
                      +|+++...+|++.++++++.+  ++++++++++++..+ ..++++||+|++++|.|......+     ...|++++.++.
T Consensus        63 r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~  139 (400)
T 3nmy_A           63 RTHNPTRFAYERCVAALEGGT--RAFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL  139 (400)
T ss_dssp             TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred             cCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence            456667889999999999864  566667779999984 568899999999999998544433     335999999985


Q ss_pred             CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (334)
Q Consensus       200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i  278 (334)
                      +     |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|....... +.    ..+.++++
T Consensus       140 ~-----d~~~l~~~i~-~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div~  208 (400)
T 3nmy_A          140 T-----DPAAFKAAIR-ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-PL----SLGADLVV  208 (400)
T ss_dssp             T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-GG----GGTCSEEE
T ss_pred             C-----CHHHHHHHhc-cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-hh----hcCCcEEE
Confidence            3     8999999997 689999999999999999999999999987 99999999997543221 11    12456999


Q ss_pred             cCCchhhcccccchhe--eEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRVGY--GAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~--l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||.++.+|.++|.  +++ ++++++.+......  ...++..++++...++.
T Consensus       209 ~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~  263 (400)
T 3nmy_A          209 HSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT  263 (400)
T ss_dssp             EETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT
T ss_pred             ecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH
Confidence            9999999888888866  343 77888877665543  45677877777776654

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.84  E-value=8.1e-21  Score=180.89  Aligned_cols=213  Identities=11%  Similarity=0.038  Sum_probs=151.8

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcC---cC--CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEE-eCCHHHHHHHHHHHhc
Q 019868           97 IVKIDANENPYGPPPEVREALGQL---KF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCVL  167 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~--~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~-t~G~~~~i~~~~~~l~  167 (334)
                      ++++.  ..+.++|+.+++++.+.   ..  .+.||..  ...++|+.+++++|++ +++|++ |+|+++++..++.+++
T Consensus        41 ~~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~  118 (398)
T 2fyf_A           41 DGRFG--SGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI  118 (398)
T ss_dssp             SCBCC--SSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC
T ss_pred             Ccccc--CCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc
Confidence            45554  34567889999998762   11  1344543  3578999999999997 468999 9999999999999999


Q ss_pred             CCCCEEEEcCCCChh-HHHHHHHC--CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          168 DPGDKIVDCPPTFTM-YEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       168 ~~gd~Vl~~~p~y~~-~~~~~~~~--G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      ++| .+++..+.|.. ....+...  |++++.++.++++..+.     .++ +++++|++++|+||||.+++.+++.++ 
T Consensus       119 ~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~-  190 (398)
T 2fyf_A          119 DKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-----QTD-PSVDVIAWAHNETSTGVAVAVRRPEGS-  190 (398)
T ss_dssp             SSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCC-TTCSEEEEESEETTTTEECCCCCCTTC-
T ss_pred             CCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-----ccc-CCCCEEEEeCcCCCcceecchHHhhhh-
Confidence            887 23333334431 12245555  88888888654444442     244 678999999999999999999888776 


Q ss_pred             hCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh----------------
Q 019868          245 EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----------------  308 (334)
Q Consensus       245 ~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~----------------  308 (334)
                       .++++|+||+|..+.....    +.  +..+++.|+||.||++| ++||+++++++++.+.+.                
T Consensus       191 -~~~~vivD~a~~~~~~~~~----~~--~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  262 (398)
T 2fyf_A          191 -DDALVVIDATSGAGGLPVD----IA--ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIA  262 (398)
T ss_dssp             -C-CEEEEECTTTTTTSCCC----GG--GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHH
T ss_pred             -cCCeEEEEeccccCCcccC----cc--cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHHH
Confidence             5899999999987653211    11  23488999999999776 699999999998877532                


Q ss_pred             -------cCCCCCcHHHHHHHHHHhc
Q 019868          309 -------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       309 -------~~~~~~~~~~q~aa~~~L~  327 (334)
                             ..+++++..++.++.++|+
T Consensus       263 ~~~~~~~~~~~t~~~~~~~a~~~al~  288 (398)
T 2fyf_A          263 VENSLKNQTYNTPAIATLALLAEQID  288 (398)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred             hhhcccCCCCCCCCHHHHHHHHHHHH
Confidence                   1224577777777776664

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.84  E-value=1.9e-20  Score=184.53  Aligned_cols=170  Identities=15%  Similarity=0.096  Sum_probs=141.9

Q ss_pred             HHHHHHHHhcCCCC--CCE--EEeCCHHHHHHHHHHHhcCCC--------CEEEEcCCCChhHHHHHHHCCCeEEEeeCC
Q 019868          133 RLRAALAKDSGLES--DHI--LVGCGADELIDLIMRCVLDPG--------DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK  200 (334)
Q Consensus       133 ~lr~~lA~~~~~~~--~~I--~~t~G~~~~i~~~~~~l~~~g--------d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~  200 (334)
                      ++++.+++++|.++  +++  ++|+|+++++..+++++.++|        |+|+++.|+|..+...++..|++++.++.+
T Consensus       143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~  222 (514)
T 3mad_A          143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD  222 (514)
T ss_dssp             HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred             HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC
Confidence            45566688888764  688  999999999999999988776        999999999999999999999999999987


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-----CC--chhhhcCC
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKH  272 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-----~~--~~~~~~~~  272 (334)
                      +++.+|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|.++...     +.  ........
T Consensus       223 ~~~~~d~~~Le~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~  301 (514)
T 3mad_A          223 ADYRADVAAMREAIT-PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLE  301 (514)
T ss_dssp             TTSCBCHHHHHHHCC-TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTST
T ss_pred             CCCCCCHHHHHHHhc-cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCC
Confidence            788999999999997 689999999999999999999999999988 9999999999987431     11  01111223


Q ss_pred             CcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       273 ~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      +.++++.|++|.+ .+|.++||++++++....
T Consensus       302 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~  332 (514)
T 3mad_A          302 GVTSVSADTHKYG-YGAKGTSVILYRRPDLLH  332 (514)
T ss_dssp             TCCEEEECTTTTT-CCCSSCEEEEESSHHHHT
T ss_pred             CCcEEEECchhcc-CCCCCeEEEEEeCHHHhc
Confidence            4578899999964 478899999987765543

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.84  E-value=1e-20  Score=183.91  Aligned_cols=171  Identities=14%  Similarity=0.095  Sum_probs=137.5

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE---EEEcCCCChhH----HHHHHHCCCeE-----EEee
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK---IVDCPPTFTMY----EFDAAVNGAAV-----VKVP  198 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~---Vl~~~p~y~~~----~~~~~~~G~~v-----~~v~  198 (334)
                      ..++++.+++++|+++++|++|+|+++++.+++.+++++|++   |+++.|+|+.+    ...++..|+++     ..++
T Consensus       113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~  192 (465)
T 3e9k_A          113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP  192 (465)
T ss_dssp             THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred             HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence            467999999999999999999999999999999999876654   99999999874    33666789885     2335


Q ss_pred             CCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868          199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (334)
Q Consensus       199 ~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~  275 (334)
                      .++++.+|++++++++++  +++++|++++|+||||.+++.+++.++++. |+++|+|++|.......    .+...+..
T Consensus       193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~----~~~~~~~D  268 (465)
T 3e9k_A          193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL----YLHDWGVD  268 (465)
T ss_dssp             CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCC
T ss_pred             CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC----chhhcCCC
Confidence            556788999999999962  478999999999999999999999999987 99999999987533211    11223456


Q ss_pred             EEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       276 i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      +++.|++|.++....++|++++++++++.+
T Consensus       269 ~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~  298 (465)
T 3e9k_A          269 FACWCSYKYLNAGAGGIAGAFIHEKHAHTI  298 (465)
T ss_dssp             EEEECSSSTTCCCTTCCCEEEECGGGTTTS
T ss_pred             EEEECcccccccCCCceEEEEEcHHHHhhc
Confidence            899999998832233789999988876544

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.84  E-value=7.7e-21  Score=186.36  Aligned_cols=170  Identities=12%  Similarity=0.067  Sum_probs=139.5

Q ss_pred             HHHHHHHHhcCCC--CCCEEEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-
Q 019868          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD-----PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-  201 (334)
Q Consensus       133 ~lr~~lA~~~~~~--~~~I~~t~G~~~~i~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-  201 (334)
                      ++++.+++++|++  ++++++++|+++++..+++++++     +|   |+|+++.|+|..+...++..|++++.++.++ 
T Consensus       111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~  190 (497)
T 3mc6_A          111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT  190 (497)
T ss_dssp             HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred             HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence            4555667778887  78999999999999999998865     56   8999999999999999999999999999766 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-------CCc-hhhhcCC
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-------ESR-MEWVKKH  272 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-------~~~-~~~~~~~  272 (334)
                      ++.+|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..+...       +.. .......
T Consensus       191 ~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~  269 (497)
T 3mc6_A          191 TYQVDLGKVKKFIN-KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP  269 (497)
T ss_dssp             TCSBCTTTTGGGCC-SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred             cCcCCHHHHHHHHh-hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence            78899999999997 579999999999999999999999999987 9999999999854310       001 0111223


Q ss_pred             CcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       273 ~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      +..+++.|++|.+ .+|.++||++++++.+..
T Consensus       270 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~  300 (497)
T 3mc6_A          270 GVTSISCDTHKYG-FAPKGSSVIMYRNSDLRM  300 (497)
T ss_dssp             TCCEEEEETTTTT-CCCSSCEEEECSSHHHHT
T ss_pred             CCcEEEECchhhc-CCCCCceeEEecCHHHHh
Confidence            4568899999954 578899999997766543

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.84  E-value=1.8e-20  Score=175.39  Aligned_cols=194  Identities=16%  Similarity=0.066  Sum_probs=138.3

Q ss_pred             CCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC--EEEEcCCCChhHHH---HHHHCCCeEEEe
Q 019868          124 YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEF---DAAVNGAAVVKV  197 (334)
Q Consensus       124 ~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd--~Vl~~~p~y~~~~~---~~~~~G~~v~~v  197 (334)
                      ..|+ +++..+|+++++++++.+  ..++++|+++++..++++++.+||  .|+++.+.|..+..   .+...|++++.+
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~~~--~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v  118 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLGMD--DAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV  118 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred             ccccCChHHHHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence            4574 467899999999999974  334446677899999998888888  67776666543322   345679999999


Q ss_pred             eCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc-ccCCcHHHHHHHHhC----CCeEEEccCCcCcc---CCCCchhhh
Q 019868          198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYTEFS---GLESRMEWV  269 (334)
Q Consensus       198 ~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~----~~~lIvDeay~~~~---~~~~~~~~~  269 (334)
                      +. +++.+|+++++++.   ++++|++++||||| |.+++.+++++|++.    ++++|+||+|....   .........
T Consensus       119 ~~-~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  194 (357)
T 3lws_A          119 GA-ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA  194 (357)
T ss_dssp             SC-TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred             cC-CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence            85 45689999999873   38999999999998 999998888877664    99999999987211   122222222


Q ss_pred             cCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHhcCC----CCCcHHHHHHHHHHhcC
Q 019868          270 KKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAAEVAACAALQN  328 (334)
Q Consensus       270 ~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~~~~----~~~~~~~q~aa~~~L~~  328 (334)
                      ...+  +++.|+||.| ++.|   ||+++++++++.+.+.+..    .......+.++.++|++
T Consensus       195 ~~~d--~~~~s~sK~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  253 (357)
T 3lws_A          195 GLFD--SIYISFYKGLGGIAG---AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL  253 (357)
T ss_dssp             TTSS--EEEEESSSTTCCSSC---EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred             hcCC--EEEEeccccCCCCce---EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence            2223  4578999998 4334   9999999999988765432    22234444555566653

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.84  E-value=7.6e-20  Score=176.61  Aligned_cols=160  Identities=21%  Similarity=0.160  Sum_probs=131.2

Q ss_pred             CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCC
Q 019868          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (334)
Q Consensus       125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~  200 (334)
                      +|+++...+|++++|+++|.+.  .++++++++++..++.+++++||+|++++|+|..+..    .+...|++++.++.+
T Consensus        78 r~~~p~~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~  155 (430)
T 3ri6_A           78 RSSNPTVEDLEQRLKNLTGALG--VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM  155 (430)
T ss_dssp             --CCHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCCHHHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence            3467778999999999999643  5555566799999999999999999999999987776    566799999999854


Q ss_pred             CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... ...    ..+.+++++
T Consensus       156 -----d~~~l~~ai~-~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~----~~g~div~~  224 (430)
T 3ri6_A          156 -----DSLAVEHACD-ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAK----RLGVDIEVL  224 (430)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HcCCEEEEE
Confidence                 8999999997 689999999999999999999999999998 9999999999854431 111    233469999


Q ss_pred             CCchhhcccccchheeEc
Q 019868          280 TFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~  297 (334)
                      |+||.++.+|..+|.+++
T Consensus       225 S~sK~l~g~g~~~gG~vv  242 (430)
T 3ri6_A          225 SSTKFISGGGTSVGGVLI  242 (430)
T ss_dssp             ECCCEEETTEEECCEEEE
T ss_pred             CCcccccCCCCceEEEEE
Confidence            999999877766665554

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.84  E-value=4.7e-21  Score=186.04  Aligned_cols=233  Identities=14%  Similarity=0.121  Sum_probs=156.2

Q ss_pred             CCCCCCeeecCCC--CCCCCC-CHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..++..++|+..|  .++++. +|++++++.+ +....     .|+.....+|++.++++++.. .++|++++|+++++.
T Consensus        57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  136 (451)
T 3oks_A           57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE  136 (451)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred             ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence            3456778999877  566664 7889888765 32221     234444567888888888654 579999999999999


Q ss_pred             HHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCC--------------eEEEeeCCCCC-----CC--------CHHHHH
Q 019868          161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKSDF-----SL--------NVELIA  211 (334)
Q Consensus       161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~--------------~v~~v~~~~~~-----~~--------d~~~l~  211 (334)
                      .+++....  .+++|++.+++|..+...+...+.              .+..++....+     +.        +++.++
T Consensus       137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  216 (451)
T 3oks_A          137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI  216 (451)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence            99986653  458999999999876655443221              34555532110     11        244444


Q ss_pred             Hhccc---CCceEEEEeCCCCccc-cCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcC
Q 019868          212 DAVER---EKPKCIFLTSPNNPDG-SIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRT  280 (334)
Q Consensus       212 ~~l~~---~~~~~i~l~~p~NPtG-~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S  280 (334)
                      +.+++   .+..+++++.|.|++| .+.+    .+++.++++. ++++|+||+|.+|...+...  ...+....   +.|
T Consensus       217 ~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t  293 (451)
T 3oks_A          217 TVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPD---LIV  293 (451)
T ss_dssp             HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred             HHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCC---eee
Confidence            44431   2345566666766655 4444    5666666665 99999999999886443321  11122222   228


Q ss_pred             CchhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       281 ~SK~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      |||.++. |+|+||+++++++++.+.+..  ..++.|+++|+++.++|+
T Consensus       294 ~sK~l~~-G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  341 (451)
T 3oks_A          294 TAKGIAG-GLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIE  341 (451)
T ss_dssp             ECGGGGT-TSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             ehhhhhC-CcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence            9999985 999999999999988776433  347899999999999986

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.83  E-value=1.3e-20  Score=184.66  Aligned_cols=197  Identities=16%  Similarity=0.098  Sum_probs=145.2

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCC--CCCC-------cChH----HHHHHHHHhcCCCCCC----EEEeCCHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPY--IYPD-------PESR----RLRAALAKDSGLESDH----ILVGCGAD  156 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~--~Yp~-------~g~~----~lr~~lA~~~~~~~~~----I~~t~G~~  156 (334)
                      .+.|+|..++++  +++.+++++.+ +...+  +||.       ....    .+++.+++++|+++++    |++++|+ 
T Consensus        44 ~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-  120 (483)
T 1rv3_A           44 RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-  120 (483)
T ss_dssp             HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-
T ss_pred             hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-
Confidence            356999888874  57899999876 33222  3442       1223    4458888899988754    8899999 


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHHH--------HHHCC--CeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEe
Q 019868          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD--------AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~G--~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +++..++.++++|||+|++++|.|..+...        +...|  .+++.++.+ +++.+|++++++++++.++|+|++ 
T Consensus       121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-  199 (483)
T 1rv3_A          121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-  199 (483)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-
T ss_pred             HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-
Confidence            888887888999999999999998765421        22233  566666544 568899999999997568999999 


Q ss_pred             CCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +++|++ .+++.+++.+|++. ++++|+|++|.. +...+.....+.  ...+++.|++|++  +|+|.||++++++
T Consensus       200 ~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~div~~s~~K~l--~GprgG~i~~~~~  271 (483)
T 1rv3_A          200 GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HCHVVTTTTHKTL--RGCRAGMIFYRRG  271 (483)
T ss_dssp             CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TCSEEEEESSGGG--CCCSCEEEEEECS
T ss_pred             eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CCcEEEecCcccC--CCCCceEEEEcch
Confidence            899999 99999999999987 999999999863 322111111111  2348899999976  6899999999763

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.83  E-value=2.9e-20  Score=181.78  Aligned_cols=232  Identities=18%  Similarity=0.175  Sum_probs=163.6

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-CCC----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~~----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+++.+||+..|  .+.++ .+|++++++.+ +. ..+    .|+.....+|.+.++++++.+.++|++++|+++++..+
T Consensus        51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A  130 (476)
T 3i5t_A           51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSA  130 (476)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHH
Confidence            356778999877  56676 57899988765 32 111    24444566788888888877778999999999999999


Q ss_pred             HHHhcC--------CCCEEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCC---CCCC--------HHHH
Q 019868          163 MRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSD---FSLN--------VELI  210 (334)
Q Consensus       163 ~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~---~~~d--------~~~l  210 (334)
                      ++.+..        .+++|++.+|.|..+...+...+..             +..++....   +..|        ++++
T Consensus       131 ik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l  210 (476)
T 3i5t_A          131 LRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEF  210 (476)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHH
Confidence            997753        3579999999998777665543322             223331110   1222        7888


Q ss_pred             HHhccc---CCceEEEEeCCCCcccc-CCcHHH---HHHHHhC-CCeEEEccCCcCccCCCCch--h-hhcCCCcEEEEc
Q 019868          211 ADAVER---EKPKCIFLTSPNNPDGS-IINDED---LLKILEM-PILVVLDEAYTEFSGLESRM--E-WVKKHDNLIVLR  279 (334)
Q Consensus       211 ~~~l~~---~~~~~i~l~~p~NPtG~-~~~~~~---l~~l~~~-~~~lIvDeay~~~~~~~~~~--~-~~~~~~~~i~i~  279 (334)
                      ++.+++   +++++|+++.++|++|. +++.+.   +.++++. ++++|+||+|.+|...+...  . ..+....++   
T Consensus       211 e~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~---  287 (476)
T 3i5t_A          211 EDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII---  287 (476)
T ss_dssp             HHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE---
T ss_pred             HHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh---
Confidence            888753   45678887778888886 556544   4555554 99999999999886544322  1 222223333   


Q ss_pred             CCchhhcccc-cchheeEcCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHhc
Q 019868          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~-------~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +|||.++ .| +|+||+++++++++.+.+.       .  ..|+.++++++++.++|+
T Consensus       288 t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~  344 (476)
T 3i5t_A          288 TFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIE  344 (476)
T ss_dssp             EECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred             hhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence            6899998 58 9999999999999988753       1  347899999999999997

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.83  E-value=2.9e-20  Score=180.24  Aligned_cols=207  Identities=15%  Similarity=0.084  Sum_probs=149.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc----Ch------HHHH-HHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----ES------RRLR-AALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~----g~------~~lr-~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +.|+|..++++.  +|++++++.+ +.  +..+||..    |.      .++. +.+++++|++.. .++++|+++++..
T Consensus        46 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~-~v~~~sGs~a~~~  122 (447)
T 3h7f_A           46 DTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFA-NVQPHSGAQANAA  122 (447)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred             CceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCce-EEEeCCHHHHHHH
Confidence            468997777764  8999999876 32  22334321    21      3344 788888997653 2326677889999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhH-HH----HHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMY-EF----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~-~~----~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++.+++++||+|++++|+|..+ ..    .....+..++.++.+ +++.+|++++++++++.++++|++++|+||++.  
T Consensus       123 a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--  200 (447)
T 3h7f_A          123 VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--  200 (447)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--
T ss_pred             HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--
Confidence            9999999999999999998762 11    111135566777643 567899999999986557899999999999887  


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          236 NDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      +.+++.++++. ++++|+||+|. ++.+.+.......  ...+++.|+||++  +|+|.||+++++++++.+.+...+
T Consensus       201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~  274 (447)
T 3h7f_A          201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HADVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFP  274 (447)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTT
T ss_pred             CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CCcEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCC
Confidence            88999999988 99999999974 3332221111111  2248899999986  489999999999998888776554

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.82  E-value=8.6e-20  Score=175.64  Aligned_cols=159  Identities=18%  Similarity=0.165  Sum_probs=131.6

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEe-eCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKV-PRKS  201 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v-~~~~  201 (334)
                      +++...+++++++++++.+ +.|++++ +++++..++..++++||+|+++.+.|..+...+    +..|++++.+ +.+ 
T Consensus        56 ~~~~~~~l~~~la~~~g~~-~~v~~~s-Gt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-  132 (421)
T 2ctz_A           56 MNPTVDVLEKRLAALEGGK-AALATAS-GHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-  132 (421)
T ss_dssp             BCHHHHHHHHHHHHHHTCS-EEEEESS-HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-
T ss_pred             CChHHHHHHHHHHHHhCCC-ceEEecC-HHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-
Confidence            3445689999999999975 4455555 599999999988999999999999998776654    6789999998 642 


Q ss_pred             CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCC-cCccCCCCchhhhcCCCcEEEEc
Q 019868          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLR  279 (334)
Q Consensus       202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay-~~~~~~~~~~~~~~~~~~~i~i~  279 (334)
                          |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++| ... ......    ..+.++++.
T Consensus       133 ----d~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~----~~~~Di~~~  202 (421)
T 2ctz_A          133 ----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-YLLRPL----AWGAALVTH  202 (421)
T ss_dssp             ----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG----GGTCSEEEE
T ss_pred             ----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-ccCCcc----ccCCeEEEE
Confidence                8999999997 689999999999999999999999999988 9999999999 533 222222    123569999


Q ss_pred             CCchhhcccccchheeEcC
Q 019868          280 TFSKRAGLAGLRVGYGAFP  298 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~~  298 (334)
                      |++|.++.+|.|+|++++.
T Consensus       203 s~~K~l~~~g~~~G~~~~~  221 (421)
T 2ctz_A          203 SLTKWVGGHGAVIAGAIVD  221 (421)
T ss_dssp             ETTTTTTCSSCCCCEEEEE
T ss_pred             CCcccccCCCCcEEEEEEe
Confidence            9999999899999998873

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.82  E-value=3.2e-20  Score=176.37  Aligned_cols=222  Identities=18%  Similarity=0.085  Sum_probs=153.9

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-Cc-C-CCCCC------C-cChHH----HHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LK-F-PYIYP------D-PESRR----LRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~-~~~Yp------~-~g~~~----lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..++++ .+++++  ++++++++.+ +. . ..+|+      . +...+    +|+++++++|+++++|++++| ++++.
T Consensus        24 ~~~~~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~~   99 (405)
T 2vi8_A           24 AKIELI-ASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQANM   99 (405)
T ss_dssp             HSEECC-TTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHH
T ss_pred             cceeec-cCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHHH
Confidence            345555 445655  8999999876 32 2 22222      1 22334    456999999988665666777 99999


Q ss_pred             HHHHHhcCCCCEEEEcCCCChhHHH-H--HHHC--CCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868          161 LIMRCVLDPGDKIVDCPPTFTMYEF-D--AAVN--GAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~--G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~  234 (334)
                      .++.+++++||+|+++.|+|+.+.. .  +...  +.+++.++.+ +++.+|++++++++++.++++|++ +|+|. |..
T Consensus       100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~  177 (405)
T 2vi8_A          100 AVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRI  177 (405)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSC
T ss_pred             HHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-Ccc
Confidence            9999999999999999999987643 1  1122  3478888753 567899999999997437888887 45553 577


Q ss_pred             CcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcCC
Q 019868          235 INDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       235 ~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      .+.+++.++++. ++++|+||+|..+. ..+.....+.  ...++++|+||.|+ +.|   ||+++++++++.+.+....
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~  252 (405)
T 2vi8_A          178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFP  252 (405)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccc--cCCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcc
Confidence            789999999987 99999999998432 1111111111  23389999999986 566   9999999999988876554


Q ss_pred             C--C-CcHHHHHHHHHHhc
Q 019868          312 Y--N-VSVAAEVAACAALQ  327 (334)
Q Consensus       312 ~--~-~~~~~q~aa~~~L~  327 (334)
                      +  + .+.....++.++|+
T Consensus       253 ~~~~~~~~~~~aa~~~al~  271 (405)
T 2vi8_A          253 GIQGGPLMHVIAAKAVAFG  271 (405)
T ss_dssp             TTCSSCCHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHH
Confidence            3  2 24444444445554

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.80  E-value=3.2e-19  Score=175.51  Aligned_cols=194  Identities=15%  Similarity=0.050  Sum_probs=147.5

Q ss_pred             CCCCHHHHHHHhcC-cCC-CCC-CCcChH----HHHHHHHHhcCCC--CCCEE---EeCCHHHHHHHHHHHhcCC-----
Q 019868          107 YGPPPEVREALGQL-KFP-YIY-PDPESR----RLRAALAKDSGLE--SDHIL---VGCGADELIDLIMRCVLDP-----  169 (334)
Q Consensus       107 ~~~~~~v~~al~~~-~~~-~~Y-p~~g~~----~lr~~lA~~~~~~--~~~I~---~t~G~~~~i~~~~~~l~~~-----  169 (334)
                      ..+++.+.+++.+. ... ..| ..++..    ++++.+++++|++  ++++.   +|+|+++++.+++.++..+     
T Consensus        66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~  145 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR  145 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence            45678888888763 221 112 222322    5677788889987  55554   4899999999998877655     


Q ss_pred             ---CC-----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868          170 ---GD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (334)
Q Consensus       170 ---gd-----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (334)
                         |+     +|+++.++|..+...++..|++++.++.+++ +.+|+++++++++ +++++|++++|+||||.+.+.+++
T Consensus       146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I  224 (502)
T 3hbx_A          146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD-ENTICVAAILGSTLNGEFEDVKLL  224 (502)
T ss_dssp             HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC-TTEEEEEEEBSCTTTCCBCCHHHH
T ss_pred             HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh-hCCEEEEEecCCCCCCcccCHHHH
Confidence               76     9999999999999999999999999996554 8999999999997 688999999999999999999999


Q ss_pred             HHHHhC-------CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHH
Q 019868          241 LKILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSII  302 (334)
Q Consensus       241 ~~l~~~-------~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i  302 (334)
                      .++++.       ++++++|++|..+..   .+.....+....-.++..+.+| |++++.++||+++. ++.+
T Consensus       225 ~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK-~l~~p~g~G~~~~~~~~~l  296 (502)
T 3hbx_A          225 NDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHK-YGLVYAGIGWVIWRNKEDL  296 (502)
T ss_dssp             HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGS
T ss_pred             HHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECccc-ccCCCCCeEEEEEeCHHHh
Confidence            999973       899999999987641   1111111222344677888999 45578899998874 4444

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.80  E-value=2.7e-19  Score=173.93  Aligned_cols=193  Identities=14%  Similarity=0.083  Sum_probs=145.7

Q ss_pred             HHHHHHHHHhcCCCCCCEEEeCCHHH-HHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCC
Q 019868          132 RRLRAALAKDSGLESDHILVGCGADE-LIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSL  205 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I~~t~G~~~-~i~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~  205 (334)
                      .++|+.+++++|++++ +++|+|+++ ++..++.++..  +|+.|+++++.|..+...++..|++++.++.   ++++.+
T Consensus       136 ~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~  214 (456)
T 2z67_A          136 NKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYV  214 (456)
T ss_dssp             HHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCc
Confidence            4588999999999877 999999994 55444544433  6788999999999999999999999999885   567889


Q ss_pred             CHHHHHHhc-cc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC--CchhhhcCCCcEEEE
Q 019868          206 NVELIADAV-ER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVL  278 (334)
Q Consensus       206 d~~~l~~~l-~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i  278 (334)
                      |++++++++ +.   .++.+|++++||||||.+.+.+++.++++. ++++++|++|..+..+.  ........ ...+++
T Consensus       215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~  293 (456)
T 2z67_A          215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVV  293 (456)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEE
T ss_pred             CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEE
Confidence            999999999 42   467788889999999999999999999998 99999999998765311  11111111 334788


Q ss_pred             cCCchhhcccccchheeEc-CHHHHHHHHHhcCCCC--CcHHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--VSVAAEVAACAALQ  327 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~~~--~~~~~q~aa~~~L~  327 (334)
                      .|++|.+ ++++|+||+++ ++++++.+......+.  .+.+++.++...+.
T Consensus       294 ~s~hK~~-~~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~  344 (456)
T 2z67_A          294 SSSDKNL-LTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG  344 (456)
T ss_dssp             EEHHHHH-CCCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH
T ss_pred             EcCCCCc-CCCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH
Confidence            9999955 46799999999 6788887743322221  22455666665554

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.79  E-value=1.3e-19  Score=175.68  Aligned_cols=228  Identities=12%  Similarity=0.097  Sum_probs=155.3

Q ss_pred             CCCCCeeecCCCC--CCCC-CCHHHH-H-HHhc---C-cCC----CCCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHH
Q 019868           92 RKPEDIVKIDANE--NPYG-PPPEVR-E-ALGQ---L-KFP----YIYPDPESRRLRAALAKDSG-LESDHILVGCGADE  157 (334)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~-~-al~~---~-~~~----~~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~  157 (334)
                      .++..++|+..+.  ++++ .+|+++ + ++.+   . ...    ..|+.....++++.++++++ ..+++|++++|+++
T Consensus        51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gse  130 (449)
T 2cjg_A           51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGAL  130 (449)
T ss_dssp             TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHH
T ss_pred             CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHH
Confidence            4456688986653  4565 478888 7 7655   2 221    23555556789999999997 56789999999999


Q ss_pred             HHHHHHHHhc---C-----------CCCEEEEcCCCChhHHHHHHH---------CCC-----eEEEeeCCC--CC----
Q 019868          158 LIDLIMRCVL---D-----------PGDKIVDCPPTFTMYEFDAAV---------NGA-----AVVKVPRKS--DF----  203 (334)
Q Consensus       158 ~i~~~~~~l~---~-----------~gd~Vl~~~p~y~~~~~~~~~---------~G~-----~v~~v~~~~--~~----  203 (334)
                      ++..+++.+.   .           +||+|++.+|.|..+...+..         .|.     .++.+|.++  ..    
T Consensus       131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  210 (449)
T 2cjg_A          131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM  210 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence            9999987543   2           289999999999765432211         122     456666433  11    


Q ss_pred             ----CCCHHHHHHhccc--CCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhhc
Q 019868          204 ----SLNVELIADAVER--EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVK  270 (334)
Q Consensus       204 ----~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~~  270 (334)
                          ..+++++++.+++  +++++|+++.++||||. +++.+++++|.+.    ++++|+||+|.+|...+..  ....+
T Consensus       211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~  290 (449)
T 2cjg_A          211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD  290 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred             chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence                1456668888852  46777776655799995 7777777776654    9999999999987654332  12222


Q ss_pred             CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH-----H--hcCCCCCcHHHHHHHHHHhc
Q 019868          271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----R--AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       271 ~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~-----~--~~~~~~~~~~~q~aa~~~L~  327 (334)
                      ...++   .||||.|     |+||+++++++++.+.     .  ....++.|+++|.++.++|+
T Consensus       291 ~~~di---~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~  346 (449)
T 2cjg_A          291 VAPDI---VAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILE  346 (449)
T ss_dssp             CCCSE---EEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             CCceE---EEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHH
Confidence            22333   2789987     8999999998887522     1  11236789999999999886

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.79  E-value=1.3e-19  Score=175.75  Aligned_cols=169  Identities=16%  Similarity=0.065  Sum_probs=130.6

Q ss_pred             CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCC-
Q 019868          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSD-  202 (334)
Q Consensus       126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~-  202 (334)
                      ++.....++++.+|+ +|.+ +++++++|+++++..++.+++++||+|+++.|+|..+...+...|++++.++.  +++ 
T Consensus        54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~  131 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT  131 (446)
T ss_dssp             SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTT
T ss_pred             CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeecccc
Confidence            356668899999999 9986 78999999999999999999999999999999999999988889999999886  544 


Q ss_pred             ---CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEE
Q 019868          203 ---FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV  277 (334)
Q Consensus       203 ---~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~  277 (334)
                         +.+|++++   +. +++++|++++| |+||.+.+.+++.++++. ++++|+||+|.. +.+.+...... ..+..++
T Consensus       132 ~~~~~~d~~~l---~~-~~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~-~~g~Di~  205 (446)
T 2x3l_A          132 NHYNKVNLSRL---NN-DGHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL-NYQADYV  205 (446)
T ss_dssp             SSEEEEEC-----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG-GGTCSEE
T ss_pred             CcCCCCCHHHH---cC-CCceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH-HcCCCEE
Confidence               46788877   33 57899999994 559999999999999987 999999999986 22322211111 1123499


Q ss_pred             EcCCchhhcccccchheeEcCHHHHH
Q 019868          278 LRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       278 i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      +.|+||.++ ++.++||++++++.++
T Consensus       206 ~~S~~K~l~-~~~g~g~l~~~~~~i~  230 (446)
T 2x3l_A          206 VQSFHKTLP-ALTMGSVLYIHKNAPY  230 (446)
T ss_dssp             EECHHHHSS-SCTTCEEEEEETTCTT
T ss_pred             EECCccccc-cccccEEEEEcCCcCC
Confidence            999999643 3345899999766543

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.79  E-value=3.2e-19  Score=173.13  Aligned_cols=183  Identities=16%  Similarity=0.150  Sum_probs=129.3

Q ss_pred             HHHHHHHhc-CcCC-CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCC-----C----CEEEEcCC
Q 019868          111 PEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP-----G----DKIVDCPP  178 (334)
Q Consensus       111 ~~v~~al~~-~~~~-~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~-----g----d~Vl~~~p  178 (334)
                      +++++++.+ +... ..| +.++..+||++++++++.  +++++|+|+++++..++++++++     |    |+|++..+
T Consensus        53 ~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~  130 (467)
T 2oqx_A           53 GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNY  130 (467)
T ss_dssp             SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESS
T ss_pred             HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEeccc
Confidence            555555544 3322 357 456788999999999985  68999999999999999998888     8    99888754


Q ss_pred             CChhHHHHHHHCCCeEEEee------CC----CCCCCCHHHHHHhccc---CCceEEEEeCCCCcc-ccCCcHHHHHHHH
Q 019868          179 TFTMYEFDAAVNGAAVVKVP------RK----SDFSLNVELIADAVER---EKPKCIFLTSPNNPD-GSIINDEDLLKIL  244 (334)
Q Consensus       179 ~y~~~~~~~~~~G~~v~~v~------~~----~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPt-G~~~~~~~l~~l~  244 (334)
                      .|..+.......|+.++...      .+    .++.+|++++++++++   +++++|++++|+||| |.+++.+++++|+
T Consensus       131 h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~  210 (467)
T 2oqx_A          131 FFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMY  210 (467)
T ss_dssp             CCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHH
T ss_pred             ccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHH
Confidence            44555666666788776542      11    2456899999999974   368999999999998 8999988777666


Q ss_pred             hC----CCeEEEccCCcC----------ccCCCCchhhh-----cCCCcEEEEcCCchhhccc-ccchheeEcCHH
Q 019868          245 EM----PILVVLDEAYTE----------FSGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLS  300 (334)
Q Consensus       245 ~~----~~~lIvDeay~~----------~~~~~~~~~~~-----~~~~~~i~i~S~SK~~gl~-G~R~G~l~~~~~  300 (334)
                      +.    ++++|+|+++..          ..+.+.....+     ...+  +++.|+||.+|++ |   ||++++++
T Consensus       211 ~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~~  281 (467)
T 2oqx_A          211 SIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKDD  281 (467)
T ss_dssp             HHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECSG
T ss_pred             HHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecCh
Confidence            54    999999966532          12222222221     1223  4578999999876 4   78887655

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.78  E-value=2.1e-17  Score=156.67  Aligned_cols=185  Identities=16%  Similarity=0.126  Sum_probs=140.0

Q ss_pred             CCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-------cCCCCEEEEcCCCC
Q 019868          109 PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-------LDPGDKIVDCPPTF  180 (334)
Q Consensus       109 ~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-------~~~gd~Vl~~~p~y  180 (334)
                      .++++.+++.+ +.....|+..+..++|+++|++++.+  ++++++++++++..++.++       +++||+|+++.|+|
T Consensus        13 ~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~   90 (390)
T 3b8x_A           13 WDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW   90 (390)
T ss_dssp             CCHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred             CCHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCc
Confidence            45777777765 33233346677899999999999975  5666677778999999988       78999999999999


Q ss_pred             hhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868          181 TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       181 ~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      ..+...++..|++++.++.+.+ +.+|+++++++++ +++++|++++   ++|...+.+++.++++. ++++|+|++|..
T Consensus        91 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~  166 (390)
T 3b8x_A           91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESM  166 (390)
T ss_dssp             HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred             HHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence            9999999999999999996544 8999999999997 5889999874   67777999999999998 999999999985


Q ss_pred             cc-CCCCchhhhcCCCcEEEEcCC----chhhcccccchheeEcCH-HHHHHHHH
Q 019868          259 FS-GLESRMEWVKKHDNLIVLRTF----SKRAGLAGLRVGYGAFPL-SIIEYLWR  307 (334)
Q Consensus       259 ~~-~~~~~~~~~~~~~~~i~i~S~----SK~~gl~G~R~G~l~~~~-~~i~~l~~  307 (334)
                      +. ....      ..+....+.+|    +|.++ +| +.|++++++ ++.+.+..
T Consensus       167 g~~~~~~------~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~  213 (390)
T 3b8x_A          167 GATFNNK------CAGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLC  213 (390)
T ss_dssp             TCEETTE------ETTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHH
T ss_pred             cCEECCc------ccccccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHH
Confidence            43 2111      11221122333    45443 23 449999875 67666654

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.64  E-value=2e-20  Score=182.03  Aligned_cols=227  Identities=16%  Similarity=0.082  Sum_probs=161.7

Q ss_pred             CCCCCCeeecCCCCCC--CC-CCHHHHHHHhc-CcC--CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~--~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++++||+..|..+  ++ .+|++++++.+ +..  ...|+.+...+|.+.|+++++ ..+.+++++++++++..+++
T Consensus        96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik  174 (465)
T 2yky_A           96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALA  174 (465)
Confidence            4567889999887653  44 46888888875 332  245677777899999999996 56789999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHHH----HCCC--eEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccC
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDAA----VNGA--AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~----~~G~--~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~  234 (334)
                      ...  ..+++|++.+++|..+...+.    ..|.  .++.++.     -|++.+++++++  +++++|++...+|++|.+
T Consensus       175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~  249 (465)
T 2yky_A          175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCV  249 (465)
Confidence            542  345899999999976554332    1233  2333332     278889888863  467888877556669977


Q ss_pred             Cc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH--
Q 019868          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--  307 (334)
Q Consensus       235 ~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~--  307 (334)
                      .+    .+++.++++. ++++|+||+|. |... . .......+...-+.||||.+|. |+|+||+++++++++.+..  
T Consensus       250 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~-~~a~~~~gv~pDi~t~sK~lg~-G~piG~v~~~~~i~~~l~~~~  325 (465)
T 2yky_A          250 PAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-G-GGAQEMLGISADLTTLGKYIGG-GMSFGAFGGRRDLMERFDPAR  325 (465)
Confidence            65    4555555555 99999999999 7322 1 1111222223345689999995 9999999999999998876  


Q ss_pred             -----hcCCCCCcHHHHHHHHHHhc
Q 019868          308 -----AKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       308 -----~~~~~~~~~~~q~aa~~~L~  327 (334)
                           ....++.|+++|+++.++|+
T Consensus       326 ~g~~~~~~T~~~npla~aAa~aaL~  350 (465)
T 2yky_A          326 DGAFAHAGTFNNNILTMSAGHAALT  350 (465)
Confidence                 12347889999999988875

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.74  E-value=1.7e-17  Score=163.17  Aligned_cols=172  Identities=10%  Similarity=-0.003  Sum_probs=137.7

Q ss_pred             HHHHHHHHhcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------CC-----C-EEEEcCCCChhHHHHHHHCCC---e
Q 019868          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNGA---A  193 (334)
Q Consensus       133 ~lr~~lA~~~~~~--~~~I~~t~G~~~~i~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~G~---~  193 (334)
                      ++++.+++++|++  .+++++|+|+++++..++.++..        +|     + +|+++.+.|..+...++..|.   +
T Consensus       136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~  215 (504)
T 2okj_A          136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN  215 (504)
T ss_dssp             HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCccc
Confidence            4556668888987  78999999999999999887653        56     6 799999999999999988877   8


Q ss_pred             EEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCch
Q 019868          194 VVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRM  266 (334)
Q Consensus       194 v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~  266 (334)
                      ++.+|.++++.+|+++|++++++.     ++++|++++|+||||.+.+.+++.++++. ++++++|++|..+... +...
T Consensus       216 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~  295 (504)
T 2okj_A          216 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR  295 (504)
T ss_dssp             EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence            999998778999999999998632     58899999999999999999999999988 9999999999887642 1111


Q ss_pred             hhhcC-CCcEEEEcCCchhhcccccchheeEcCH-HHHHHH
Q 019868          267 EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYL  305 (334)
Q Consensus       267 ~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l  305 (334)
                      ..+.. ....+++.+++|.++.+ .++|++++++ ++++..
T Consensus       296 ~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~  335 (504)
T 2okj_A          296 HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGC  335 (504)
T ss_dssp             GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHH
T ss_pred             hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHH
Confidence            11211 12347788999988755 7899999865 465543

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.73  E-value=2.5e-17  Score=168.17  Aligned_cols=166  Identities=12%  Similarity=0.133  Sum_probs=130.1

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHCCCeEEEeeCC-CCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDFS  204 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~G~~v~~v~~~-~~~~  204 (334)
                      |+....++++.+|+++|.+. .+++++|+++++..++.+++++||+|+++.++|..+... +...|++++.++.. ++|+
T Consensus       171 ~~~~i~e~e~~lA~~~gae~-~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~  249 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYNADK-TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  249 (730)
T ss_dssp             TBTHHHHHHHHHHHHTTCSE-EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             ChHHHHHHHHHHHHHHCCCc-EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence            44447899999999999864 488999999999999999999999999999999988777 77889999988742 2333


Q ss_pred             ----CCHHHH-----HHhcccCC-----c----eEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCC
Q 019868          205 ----LNVELI-----ADAVEREK-----P----KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLES  264 (334)
Q Consensus       205 ----~d~~~l-----~~~l~~~~-----~----~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~  264 (334)
                          +|++++     ++++++..     +    +++++++| ||+|.+.+.+++.++++. ++++++||+|... .+.+.
T Consensus       250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~  328 (730)
T 1c4k_A          250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM  328 (730)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred             ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence                688887     88886320     4    89999999 589999999999999998 9999999999753 23221


Q ss_pred             -----chhh---hcCCCcEEEEcCCchhhcccccchheeE
Q 019868          265 -----RMEW---VKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       265 -----~~~~---~~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                           ....   ..+.+++++++|+||.+  +|++.|.++
T Consensus       329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I  366 (730)
T 1c4k_A          329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQI  366 (730)
T ss_dssp             GGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEE
T ss_pred             cCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEE
Confidence                 1111   11234679999999974  677766444

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.72  E-value=2.8e-17  Score=162.02  Aligned_cols=172  Identities=13%  Similarity=0.025  Sum_probs=139.2

Q ss_pred             HHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc-------C-CCC------EEEEcCCCChhHHHHHHHCCC---eE
Q 019868          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-------D-PGD------KIVDCPPTFTMYEFDAAVNGA---AV  194 (334)
Q Consensus       132 ~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~-------~-~gd------~Vl~~~p~y~~~~~~~~~~G~---~v  194 (334)
                      .++++.+++++|.+++++++++|+++++..++.++.       + +|+      +|+++.+.|..+...++..|.   ++
T Consensus       151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v  230 (515)
T 2jis_A          151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV  230 (515)
T ss_dssp             HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred             HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence            457778999999988899999999999888887653       2 575      899999999999999998888   89


Q ss_pred             EEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCC-chh
Q 019868          195 VKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RME  267 (334)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~-~~~  267 (334)
                      +.+|.++++.+|++++++++++.     ++++|++++|+||||.+.+.+++.++++. ++++++|++|..+..... ...
T Consensus       231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~  310 (515)
T 2jis_A          231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH  310 (515)
T ss_dssp             EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred             EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence            99998778899999999998632     48899999999999999999999999988 999999999988764221 111


Q ss_pred             hhcC-CCcEEEEcCCchhhcccccchheeEcCHH--HHHH
Q 019868          268 WVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEY  304 (334)
Q Consensus       268 ~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~--~i~~  304 (334)
                      .+.. ....+++.|++|.++. +.++|+++++++  +++.
T Consensus       311 ~~~g~~~aD~v~~s~hK~l~~-p~g~G~l~~~~~~~~~~~  349 (515)
T 2jis_A          311 LLDGIQRADSVAWNPHKLLAA-GLQCSALLLQDTSNLLKR  349 (515)
T ss_dssp             GGTTGGGCSEEEECTTSTTCC-CSCCEEEEESCCSCHHHH
T ss_pred             hcCCCccCCEEEECcccccCC-CCCeeEEEEeChHHHHHH
Confidence            1221 1345888999998763 467999998765  6554

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.72  E-value=1.5e-17  Score=160.59  Aligned_cols=193  Identities=15%  Similarity=0.140  Sum_probs=136.8

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc--C-cCCCCC-C--CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH-h
Q 019868           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-P--DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-V  166 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y-p--~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~-l  166 (334)
                      ..++.|.++...|+.+.+.+.+  . .....| |  ..|    ..++++.+++++|+++++|++++|++.+...+..+ .
T Consensus        67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~  146 (438)
T 1wyu_A           67 AFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR  146 (438)
T ss_dssp             CCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred             cccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh
Confidence            4667777777777777555532  1 111223 1  223    45899999999999888999999999443333332 2


Q ss_pred             cCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868          167 LDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      .++||+|+++.+.|+.+...+    +..|++++.++. +++.+|+++    ++ +++++|++++| ||||.+.+.+++.+
T Consensus       147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~  219 (438)
T 1wyu_A          147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAE  219 (438)
T ss_dssp             HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred             cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHH
Confidence            478999999999999887544    458999999986 456777766    54 57999999999 99999999999999


Q ss_pred             HHhC-CCeEEEccC---CcCccCCCCchhhhcCCCcEEEEcCCchhh----cccccchheeEcCHHHHHHH
Q 019868          243 ILEM-PILVVLDEA---YTEFSGLESRMEWVKKHDNLIVLRTFSKRA----GLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       243 l~~~-~~~lIvDea---y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~----gl~G~R~G~l~~~~~~i~~l  305 (334)
                      +++. ++++|+|..   |..+   ...    ...+..+++.| +|.|    ++.|.|+||+++++++++.+
T Consensus       220 la~~~g~~vivd~d~~a~g~~---~~~----~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l  282 (438)
T 1wyu_A          220 AAHGAGALFVAVADPLSLGVL---KPP----GAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQL  282 (438)
T ss_dssp             HHHHTTCEEEEECCTTGGGTB---CCH----HHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGC
T ss_pred             HHHHcCCEEEEEechhhccCc---CCC----ccCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhC
Confidence            9987 999995522   3322   111    12223366666 5654    46788999999998876654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.71  E-value=6.4e-17  Score=153.12  Aligned_cols=169  Identities=11%  Similarity=0.090  Sum_probs=128.6

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHCC--CeEEEeeCCC-----
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE--FDAAVNG--AAVVKVPRKS-----  201 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~G--~~v~~v~~~~-----  201 (334)
                      ..++++.++++++.+ +.|++++|+++++..++. ++++||+|+++++.|..+.  ..++..|  .+++.++.+.     
T Consensus        37 ~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~  114 (379)
T 3ke3_A           37 MNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE  114 (379)
T ss_dssp             HHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred             HHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence            457888899999987 789999999999999886 4579999999999987653  3444455  4777776422     


Q ss_pred             ---C-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCc---HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCC
Q 019868          202 ---D-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD  273 (334)
Q Consensus       202 ---~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~  273 (334)
                         . ..+|++++++++++.++++|++++++||||.+++   .+++.++++. ++++|+|+++. ...   ... +...+
T Consensus       115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~---~~~-~~~~~  189 (379)
T 3ke3_A          115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV---WLD-MKELG  189 (379)
T ss_dssp             SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC---CCC-HHHHT
T ss_pred             ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc---ccc-ccccC
Confidence               1 2589999999996457899999999999999999   5666666655 99999999986 221   111 11223


Q ss_pred             cEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       274 ~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      .++++.|++|.++ .+.++|++++++++++.+..
T Consensus       190 ~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~  222 (379)
T 3ke3_A          190 IDVLISAPQKGWS-STPCAGLVMLSAAAIKKVES  222 (379)
T ss_dssp             CSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHT
T ss_pred             CCEEEecchhhcC-CCCceEEEEECHHHHHhhhc
Confidence            4588999999876 33468999999999887764

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.71  E-value=1e-16  Score=164.57  Aligned_cols=168  Identities=17%  Similarity=0.127  Sum_probs=132.7

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCC-
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS-  204 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~-  204 (334)
                      +.....++++.+++++|.+ +.+++++|+++++..++.+++++||+|+++.|+|.++...+...|++++.++... +++ 
T Consensus       203 ~~g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~  281 (755)
T 2vyc_A          203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGI  281 (755)
T ss_dssp             TCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSC
T ss_pred             CccHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccc
Confidence            3444788999999999976 4688999999999999999999999999999999998888888999999998542 233 


Q ss_pred             ---C-----CHHHHHHhcccC-Cce--------EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCC--
Q 019868          205 ---L-----NVELIADAVERE-KPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE--  263 (334)
Q Consensus       205 ---~-----d~~~l~~~l~~~-~~~--------~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~--  263 (334)
                         +     |++++++++++. +++        ++++++| ||||.+.+.+++.++++. ++++++||+|..+. +.+  
T Consensus       282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~  360 (755)
T 2vyc_A          282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred             ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence               4     999999998642 344        8999998 799999999999999998 99999999997532 211  


Q ss_pred             ---Cchhh--hc-CCCcEEEEcCCchhhcccccc-hheeEcC
Q 019868          264 ---SRMEW--VK-KHDNLIVLRTFSKRAGLAGLR-VGYGAFP  298 (334)
Q Consensus       264 ---~~~~~--~~-~~~~~i~i~S~SK~~gl~G~R-~G~l~~~  298 (334)
                         .....  .+ ..++++++.|+||.  ++|++ .|+++++
T Consensus       361 ~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~  400 (755)
T 2vyc_A          361 ADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVR  400 (755)
T ss_dssp             TTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEE
T ss_pred             CCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeec
Confidence               11111  12 24577899999996  46877 4556553

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.71  E-value=5.2e-17  Score=158.94  Aligned_cols=197  Identities=15%  Similarity=0.093  Sum_probs=126.7

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc----C---hHHHH----HHHHHhcCCCCCC---EEEeCCHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---SRRLR----AALAKDSGLESDH---ILVGCGADEL  158 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~----g---~~~lr----~~lA~~~~~~~~~---I~~t~G~~~~  158 (334)
                      +.|.|-.++|.  +++.|++++.. +.  +..+||..    |   ..+++    +.+++++|.+.+.   .+++++++++
T Consensus        55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A  132 (490)
T 2a7v_A           55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA  132 (490)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred             cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence            34777766665  58999999876 32  32345421    2   12444    8899999988753   3445577889


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHCCCe--EEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNGAA--VVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~G~~--v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      +..++.++++|||+|+++++.|..+..        .+...|..  ++.++.+ +++.+|++++++.+...++|+|+++.+
T Consensus       133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s  212 (490)
T 2a7v_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence            999999999999999999998865321        22344544  3444433 467899999999986557899999899


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      +||+  ..+.+++.+|++. ++++++|+++. ++...+.....+.  ...+++.|+||++  .|+|.|+++++++
T Consensus       213 ~~~~--~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l--~Gp~GG~i~~~~~  281 (490)
T 2a7v_A          213 AYAR--LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTL--RGARSGLIFYRKG  281 (490)
T ss_dssp             SCCS--CCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGG--CSCSCEEEEEECS
T ss_pred             CCCC--cccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccC--ccccchheeeccc
Confidence            9874  6789999999987 99999999964 3332221111112  2348999999986  4788899998753

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.69  E-value=1.6e-16  Score=155.39  Aligned_cols=187  Identities=13%  Similarity=0.065  Sum_probs=136.8

Q ss_pred             HHHHHHhcC-c-CCCCC-CCcChHHHHHH----HHHhcCCCC---------CCEEEeCCHHHHHHHHHHHhcCC------
Q 019868          112 EVREALGQL-K-FPYIY-PDPESRRLRAA----LAKDSGLES---------DHILVGCGADELIDLIMRCVLDP------  169 (334)
Q Consensus       112 ~v~~al~~~-~-~~~~Y-p~~g~~~lr~~----lA~~~~~~~---------~~I~~t~G~~~~i~~~~~~l~~~------  169 (334)
                      .+.+++... . ....| ..++..+++++    +++++|.+.         .++++|+|+++++..++.+..++      
T Consensus        89 ~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~  168 (486)
T 1js3_A           89 MLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQ  168 (486)
T ss_dssp             HHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhh
Confidence            355666542 2 22345 34445555554    456678764         35899999999998888765321      


Q ss_pred             ---CC--------E--EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCc------eEEEEeCCCCc
Q 019868          170 ---GD--------K--IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP------KCIFLTSPNNP  230 (334)
Q Consensus       170 ---gd--------~--Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~------~~i~l~~p~NP  230 (334)
                         ||        +  |+++.+.|..+...++..|++++.+|.++++.+|+++|++++++ ++      .+|++++|+||
T Consensus       169 ~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n~  247 (486)
T 1js3_A          169 AASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTTS  247 (486)
T ss_dssp             HHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCTT
T ss_pred             ccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCCC
Confidence               42        3  78899999999999999999999999877889999999999963 33      38888999999


Q ss_pred             cccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~  300 (334)
                      ||.+-+.+++.++++. ++++++|++|+.+... +.....+ ....-..++.+++|.++.+ +++||++++++
T Consensus       248 tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~  319 (486)
T 1js3_A          248 CCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRR  319 (486)
T ss_dssp             TCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCH
T ss_pred             CCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCH
Confidence            9999999999999987 9999999999876531 1111111 0011235567899987755 89999998543

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.69  E-value=4.3e-16  Score=153.54  Aligned_cols=191  Identities=12%  Similarity=0.004  Sum_probs=144.0

Q ss_pred             HHHHhc-Cc-CCCCC-CCcChHHHHHHHH----HhcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------------CC
Q 019868          114 REALGQ-LK-FPYIY-PDPESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLD--------------PG  170 (334)
Q Consensus       114 ~~al~~-~~-~~~~Y-p~~g~~~lr~~lA----~~~~~~--~~~I~~t~G~~~~i~~~~~~l~~--------------~g  170 (334)
                      .+.+.. +. ....| ..++..+++++++    +++|.+  ++++++++|+++++..++.+..+              ++
T Consensus       113 ~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~  192 (511)
T 3vp6_A          113 GEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  192 (511)
T ss_dssp             HHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCC
T ss_pred             HHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCC
Confidence            355553 22 33456 4556666666554    456876  46899999999999888876654              56


Q ss_pred             CEEEEcCCCChhHHHHHHHCCC---eEEEeeCCCCCCCCHHHHHHhcccCC-----ceEEEEeCCCCccccCCcHHHHHH
Q 019868          171 DKIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLK  242 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~G~---~v~~v~~~~~~~~d~~~l~~~l~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~  242 (334)
                      +.|+++.+.|..+...++..|+   +++.++.+.++.+|+++|++++++.+     +++|++++|+||||.+-+.+++.+
T Consensus       193 ~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~  272 (511)
T 3vp6_A          193 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD  272 (511)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHH
T ss_pred             eEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHH
Confidence            7999999999999999999998   89999987789999999999996321     789999999999999999999999


Q ss_pred             HHhC-CCeEEEccCCcCccC-CCCchhhhc-CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHH
Q 019868          243 ILEM-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL  305 (334)
Q Consensus       243 l~~~-~~~lIvDeay~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l  305 (334)
                      +++. ++++++|++|..... .+.....+. .....+++.+++|.++.+ ..+|++++. ++.++..
T Consensus       273 ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~  338 (511)
T 3vp6_A          273 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGC  338 (511)
T ss_dssp             HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHH
T ss_pred             HHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHH
Confidence            9988 999999999987553 111111111 112347778999988755 678888874 4455544

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.68  E-value=8.9e-16  Score=155.77  Aligned_cols=195  Identities=10%  Similarity=0.066  Sum_probs=143.3

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL  205 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~  205 (334)
                      |..-..++++.+|+++|.+ +.+++++|++.++..++.+++++||+|+++.++|.++...+...|++++.++.+ ++|++
T Consensus       193 ~~g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi  271 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred             CcHHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence            4444789999999999975 457788999999999999999999999999999999999999999999999843 33443


Q ss_pred             ---------CHHHHHHhccc-CCce---EEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCcc-CCCCch--hhh
Q 019868          206 ---------NVELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLESRM--EWV  269 (334)
Q Consensus       206 ---------d~~~l~~~l~~-~~~~---~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~-~~~~~~--~~~  269 (334)
                               |++.+++++++ .++|   ++++++| ||+|.+++.+++.++++.. .+++||+|.... +.+...  ..+
T Consensus       272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~livDEAH~~~~~f~~~~~~~~al  349 (715)
T 3n75_A          272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-SIHFDSAWVPYTNFSPIYEGKCGM  349 (715)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-EEEEECTTCTTGGGSGGGTTSSTT
T ss_pred             ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-cEEEccccccccccCCcccccccc
Confidence                     89999999874 2334   8999999 9999999999999999753 379999997653 222111  111


Q ss_pred             cC---CCc-EEEEcCCchhhccccc-chheeEcCH----HHHHHHHHhcCCCCCcHHHHHHHHHHh
Q 019868          270 KK---HDN-LIVLRTFSKRAGLAGL-RVGYGAFPL----SIIEYLWRAKQPYNVSVAAEVAACAAL  326 (334)
Q Consensus       270 ~~---~~~-~i~i~S~SK~~gl~G~-R~G~l~~~~----~~i~~l~~~~~~~~~~~~~q~aa~~~L  326 (334)
                      ..   .+. +++++|++|++  +|+ ..||++++.    +.++.........+++.+..++..+++
T Consensus       350 ~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~  413 (715)
T 3n75_A          350 SGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAA  413 (715)
T ss_dssp             SSSCCTTCEEEEEECHHHHS--SCCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEEEecccccc--cCCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHH
Confidence            11   233 36699999985  465 357887743    334444444445567766655544443

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.68  E-value=1.6e-16  Score=155.84  Aligned_cols=166  Identities=14%  Similarity=0.097  Sum_probs=130.9

Q ss_pred             HHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHh----c---------CC------CC-EEEEcCCCChhHHHHHHHCC
Q 019868          133 RLRAALAKDSGLES-DHILVGCGADELIDLIMRCV----L---------DP------GD-KIVDCPPTFTMYEFDAAVNG  191 (334)
Q Consensus       133 ~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l----~---------~~------gd-~Vl~~~p~y~~~~~~~~~~G  191 (334)
                      ++++.+++++|+++ +++++|+|+++++..++.+.    +         .+      |+ .|+++.+.|..+...++..|
T Consensus       144 ~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g  223 (497)
T 2qma_A          144 KVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMG  223 (497)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcC
Confidence            34666889999865 78999999999999988863    3         12      46 89999999999998888887


Q ss_pred             C---eEEEeeCCCCCCCCHHHHHHhcccC---Cce--EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC
Q 019868          192 A---AVVKVPRKSDFSLNVELIADAVERE---KPK--CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL  262 (334)
Q Consensus       192 ~---~v~~v~~~~~~~~d~~~l~~~l~~~---~~~--~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~  262 (334)
                      .   +++.+|.++++.+|++++++++++.   +++  +|++++++||||.+.+.+++.++++. ++++++|++|..+...
T Consensus       224 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~  303 (497)
T 2qma_A          224 LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALIL  303 (497)
T ss_dssp             SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred             CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence            6   7999998778899999999998632   234  78888999999999999999999998 9999999999887642


Q ss_pred             CCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ......+.. ....+++.|++|.++.+ .++|++++++
T Consensus       304 ~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~  340 (497)
T 2qma_A          304 SSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVND  340 (497)
T ss_dssp             STTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESC
T ss_pred             CcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeC
Confidence            221111111 12347788999987755 7999999854

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.62  E-value=1.1e-15  Score=149.28  Aligned_cols=229  Identities=11%  Similarity=0.074  Sum_probs=145.6

Q ss_pred             CCCCCeeecCCCCC--CCC-CCHHHHHHHhcC-c-----CCCCCCCcChHHHHHHHHH----hcCCCCCCEEEeCCHHHH
Q 019868           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQL-K-----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADEL  158 (334)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~~-~-----~~~~Yp~~g~~~lr~~lA~----~~~~~~~~I~~t~G~~~~  158 (334)
                      .++..+||+..|..  .++ .+|++.+++.+. .     ....|+.....++++++++    +++...++|++++|++++
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA  139 (472)
T 1ohv_A           60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCS  139 (472)
T ss_dssp             TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHH
T ss_pred             CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhH
Confidence            45678999977643  345 579999998763 1     2223443335678888776    344467899999999999


Q ss_pred             HHHHHHHhc--------C-----------------CC---CEEEEcCCCChhHHHHHH-HCCCe-------------EEE
Q 019868          159 IDLIMRCVL--------D-----------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-------------VVK  196 (334)
Q Consensus       159 i~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~G~~-------------v~~  196 (334)
                      +..+++...        .                 +|   ++|++.++.|..+...+. ..|..             .+.
T Consensus       140 ~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~  219 (472)
T 1ohv_A          140 NENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAP  219 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEEC
T ss_pred             HHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccC
Confidence            999998763        1                 46   899999999987655443 33321             112


Q ss_pred             eeCCC-----C--C-----CCCHHHHHHhcccC-----CceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEcc
Q 019868          197 VPRKS-----D--F-----SLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDE  254 (334)
Q Consensus       197 v~~~~-----~--~-----~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDe  254 (334)
                      +|...     .  +     ..|++++++++++.     ++++|++...+|++|.+.+    .+++.++++. ++++|+||
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE  299 (472)
T 1ohv_A          220 FPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDE  299 (472)
T ss_dssp             CCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeC
Confidence            22100     0  0     12688898888631     6888888777888998655    4555555554 99999999


Q ss_pred             CCcCccCCCCchhhhcCCCc--EEEEcCCchhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          255 AYTEFSGLESRMEWVKKHDN--LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~--~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +|.+|...+..... ...+.  .+-+.||||.| ++|   ||++ ++++. .+....  ..++.++++++++.++|+
T Consensus       300 v~~g~g~~g~~~~~-~~~gv~~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~  369 (472)
T 1ohv_A          300 VQTGGGSTGKFWAH-EHWGLDDPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVIN  369 (472)
T ss_dssp             TTTTTTTTSSSSGG-GGGCCSSCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHH
T ss_pred             cccCCCCCCCchhc-cccCCCCCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHH
Confidence            99877654321111 11110  02234899986 456   7776 65542 111111  225678999999988885

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.52  E-value=1.1e-13  Score=135.22  Aligned_cols=189  Identities=13%  Similarity=0.063  Sum_probs=138.1

Q ss_pred             HHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHh----cCCCCC----------CEEEeCCHHHHHHHHHHHhcC-------
Q 019868          113 VREALGQ-LK-FPYIY-PDPESRRLRAALAKD----SGLESD----------HILVGCGADELIDLIMRCVLD-------  168 (334)
Q Consensus       113 v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~----~~~~~~----------~I~~t~G~~~~i~~~~~~l~~-------  168 (334)
                      +.+.+.. ++ ....| ..++..+++++++++    +|.+.+          ..++|+|+++++...+.+..+       
T Consensus        95 ~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~  174 (481)
T 4e1o_A           95 LGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMK  174 (481)
T ss_dssp             HHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhh
Confidence            3444443 22 23456 456777788777655    576532          578899999998877775532       


Q ss_pred             ------------CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCC-----ceEEEEeCCCCcc
Q 019868          169 ------------PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPD  231 (334)
Q Consensus       169 ------------~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~-----~~~i~l~~p~NPt  231 (334)
                                  ++++|+++.+.|..+...+...|++++.+|.++++.+|+++|++++++.+     +.+|+++.++|+|
T Consensus       175 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~  254 (481)
T 4e1o_A          175 TSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGV  254 (481)
T ss_dssp             HHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTT
T ss_pred             hcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCC
Confidence                        56799999999999999999899999999987889999999999986321     6778888999999


Q ss_pred             ccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcC-CCcEEEEcCCchhhcccccchheeEcC-HHHH
Q 019868          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSII  302 (334)
Q Consensus       232 G~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i  302 (334)
                      |.+-+.+++.++++. ++++++|++|..+.. .+........ .....+..+++|.++.| ..+|++++. ++.+
T Consensus       255 G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l  328 (481)
T 4e1o_A          255 CAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKL  328 (481)
T ss_dssp             CCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHH
T ss_pred             cCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHH
Confidence            999999999999988 999999999987542 1111111111 11246778999987755 456777664 4443

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.48  E-value=2e-13  Score=133.22  Aligned_cols=174  Identities=10%  Similarity=0.008  Sum_probs=130.0

Q ss_pred             CCC-CCcChHHHHHHH----HHhcCCCCC---------CEEEeCCHHHHHHHHHHHhcC-------------------CC
Q 019868          124 YIY-PDPESRRLRAAL----AKDSGLESD---------HILVGCGADELIDLIMRCVLD-------------------PG  170 (334)
Q Consensus       124 ~~Y-p~~g~~~lr~~l----A~~~~~~~~---------~I~~t~G~~~~i~~~~~~l~~-------------------~g  170 (334)
                      ..| ..++..++++++    ++++|.+.+         ..++|+|+++++...+.+..+                   ++
T Consensus       103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~  182 (475)
T 3k40_A          103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK  182 (475)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred             cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence            345 455666777665    555677543         588999999998777765421                   34


Q ss_pred             CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                      ++|+++.+.|..+...++..|++++.+|.++++ +|+++|++++++.     .+.+|+++.++|+||.+-+.+++.++++
T Consensus       183 ~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~  261 (475)
T 3k40_A          183 LVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN  261 (475)
T ss_dssp             EEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             eEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHH
Confidence            689999999999999999999999999987778 9999999998632     1567888899999999999999999998


Q ss_pred             C-CCeEEEccCCcCccC-CCCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          246 M-PILVVLDEAYTEFSG-LESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       246 ~-~~~lIvDeay~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      . ++++++|++|..... .+........ .....+..+++|.++. ...+|++++.+
T Consensus       262 ~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~  317 (475)
T 3k40_A          262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLV-NFDCSAMWLKD  317 (475)
T ss_dssp             HTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESS
T ss_pred             HhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCC-CCceEEEEEeC
Confidence            7 999999999986532 1111111111 1224778899997753 35678887743

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.43  E-value=2.5e-13  Score=128.57  Aligned_cols=190  Identities=12%  Similarity=0.023  Sum_probs=132.0

Q ss_pred             eecCCC--CCCCCCCHHHHHHHhc-CcC----C-------CCCCCc--ChHHHHHHHHHhcCCCC-CCEEE-eCCHHHHH
Q 019868           98 VKIDAN--ENPYGPPPEVREALGQ-LKF----P-------YIYPDP--ESRRLRAALAKDSGLES-DHILV-GCGADELI  159 (334)
Q Consensus        98 i~l~~~--~~~~~~~~~v~~al~~-~~~----~-------~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~-t~G~~~~i  159 (334)
                      +||+.-  ....+.|++|.+++.+ +..    +       ++-+..  -..+.|+.++++++++. ++|++ |.|+|+++
T Consensus        11 ~~~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~   90 (377)
T 3e77_A           11 VDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQF   90 (377)
T ss_dssp             ----CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             cCcccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHH
Confidence            455542  3456788999999886 321    0       000111  14688999999999865 57888 58999999


Q ss_pred             HHHHHHhcCC--CCEEEEcCCCChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          160 DLIMRCVLDP--GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       160 ~~~~~~l~~~--gd~Vl~~~p~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++++..++.+  ||+|++...++..  +...++..|..++.++.+.++..+++.++..++ +++++|.+++-.|.||.+.
T Consensus        91 n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-~~t~lV~~~h~et~tG~~~  169 (377)
T 3e77_A           91 SAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-PDASYVYYCANETVHGVEF  169 (377)
T ss_dssp             HHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-TTCSCEEEESEETTTTEEC
T ss_pred             HHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-CCccEEEEeCccCchheEc
Confidence            9999999865  8998877665543  234455678887777765566777777777775 6899999998888999999


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      |.     +++. ++++++|.+..-....    -.+.+.+  +++.|..|.+|.+|  +|++++++++
T Consensus       170 pi-----i~~~~~~~~~vD~~q~~g~~~----id~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~  223 (377)
T 3e77_A          170 DF-----IPDVKGAVLVCDMSSNFLSKP----VDVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDL  223 (377)
T ss_dssp             SS-----CCCCTTCCEEEECTTTTTSSC----CCGGGCS--EEEEEGGGTTSCTT--CEEEEEETTS
T ss_pred             hh-----hhccCCCEEEEEcccccCCCC----CchhhcC--EEEEecccccCCCc--cEEEEEcHHH
Confidence            87     4555 8999999998743321    1122333  47789999998777  6888876554

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.37  E-value=3.4e-12  Score=120.23  Aligned_cols=191  Identities=15%  Similarity=0.089  Sum_probs=132.3

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcC----C-------CCCCC--cChHHHHHHHHHhcCCC-CCCEEE-eCCHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKF----P-------YIYPD--PESRRLRAALAKDSGLE-SDHILV-GCGADELI  159 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~----~-------~~Yp~--~g~~~lr~~lA~~~~~~-~~~I~~-t~G~~~~i  159 (334)
                      +++.|..|  +.+.|++|.+++.. +..    +       ++-+.  .-..+.|+.++++++++ +++|++ |.|+|+++
T Consensus         5 ~~~~f~pg--pt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~   82 (361)
T 3m5u_A            5 RKINFSAG--PSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF   82 (361)
T ss_dssp             CCEECCSS--SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceEeecCC--CCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence            34555543  45677999999876 321    0       11011  12568899999999986 457888 99999999


Q ss_pred             HHHHHHhcCCCCEEE-EcCCCCh-hHHHHHHHCCCeEEEeeCCCCCC--CCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          160 DLIMRCVLDPGDKIV-DCPPTFT-MYEFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       160 ~~~~~~l~~~gd~Vl-~~~p~y~-~~~~~~~~~G~~v~~v~~~~~~~--~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++++..++ +||++. +..-.|. .+...++..|+++..++.+.+..  ++++.  + ++ +++++|.+++..|.||..+
T Consensus        83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~-~~t~lv~~~~~e~~tG~~~  157 (361)
T 3m5u_A           83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS-DNADYAYICSNNTIYGTQY  157 (361)
T ss_dssp             HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC-TTSSEEEEESEETTTTEEC
T ss_pred             HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC-CCCCEEEEeCCCCCcceeC
Confidence            99999988 888652 3333443 23345667899999988655432  45555  4 76 6899999998888999987


Q ss_pred             cHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       236 ~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      +.     |++.++++++|.+..-....-..    .  +-.+++.|..|.+|.+|  +|++++++++++.+.
T Consensus       158 ~~-----i~~~~~~~~vD~~q~~g~~~id~----~--~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~  215 (361)
T 3m5u_A          158 QN-----YPKTKTPLIVDASSDFFSRKVDF----S--NIALFYGGVQKNAGISG--LSCIFIRKDMLERSK  215 (361)
T ss_dssp             SS-----CCCCSSCEEEECGGGTTSSCCCC----T--TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHH
T ss_pred             Cc-----ccccCCEEEEEcccccCCCCCCc----c--cCCEEEEechhccCCCc--cEEEEEcHHHHhhhc
Confidence            72     44449999999987643321111    1  12488889999998666  799999998887664

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.35  E-value=5.2e-13  Score=126.86  Aligned_cols=182  Identities=13%  Similarity=0.006  Sum_probs=127.4

Q ss_pred             CCCCCHHHHHHHhcC-cC-----------CCCCCC--cChHHHHHHHHHhcCCCC-CCEEE-eCCHHHHHHHHHHHhcCC
Q 019868          106 PYGPPPEVREALGQL-KF-----------PYIYPD--PESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLDP  169 (334)
Q Consensus       106 ~~~~~~~v~~al~~~-~~-----------~~~Yp~--~g~~~lr~~lA~~~~~~~-~~I~~-t~G~~~~i~~~~~~l~~~  169 (334)
                      +.+.|++|++++... ..           .++-+.  .-..+.|+.+|++++++. ++|++ |.|+|+++++++..++++
T Consensus        35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~  114 (386)
T 3qm2_A           35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD  114 (386)
T ss_dssp             SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred             CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence            456789999998762 11           011111  236789999999999854 47888 689999999999999999


Q ss_pred             CCEEEEcCCCChh--HHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-CcHHHHHHH
Q 019868          170 GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLKI  243 (334)
Q Consensus       170 gd~Vl~~~p~y~~--~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~~~~l~~l  243 (334)
                      ||+|++..-++..  +...++..| ++..++.+   ++..+++++++.+++ +++++|.+++-.|.||.. .+.+++.  
T Consensus       115 gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV~~~h~et~tG~~i~pi~~i~--  190 (386)
T 3qm2_A          115 KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-DNAAYLHYCPNETIDGIAIDETPDFG--  190 (386)
T ss_dssp             CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-TTCSCEEECSEETTTTEECCCCCCCC--
T ss_pred             CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-CCCcEEEEECCcCCcCEecCchhhhc--
Confidence            9998654443332  334455678 88888865   322377788888886 689999998888889996 6666553  


Q ss_pred             HhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       244 ~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                        .++++++|.+.+-....    -.+.+.+  +++.|..|.+|.+|  +|++++++++
T Consensus       191 --~g~~~~vDa~qs~g~~p----idv~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~  238 (386)
T 3qm2_A          191 --PEVVVTADFSSTILSAP----LDVSRYG--VIYAGAQKNIGPAG--LTLVIVREDL  238 (386)
T ss_dssp             --TTCCEEEECTTTTTSSC----CCGGGCS--EEEEETTTTTCCTT--EEEEEEEGGG
T ss_pred             --CCCEEEEEcccccCCCC----CCccccC--EEEEecccccCCCc--cEEEEECHHH
Confidence              48999999998743321    1122333  46689999998666  7888887665

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.21  E-value=1.2e-10  Score=112.73  Aligned_cols=227  Identities=15%  Similarity=0.142  Sum_probs=148.0

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++.+||+..+  ...++ ..|+|.+|+.+ +.....+  +.....++.+.|++.++ ..+.|+++++++++...+++
T Consensus        83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-~~~~v~f~~SGsEA~e~Aik  161 (454)
T 4ao9_A           83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-QIEQLRFTNSGTEANLMALT  161 (454)
T ss_dssp             ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence            4567889998655  34454 56889888765 3333223  34456788999999886 35789999999999999988


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHHHH------CCCeEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccC
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~------~G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~  234 (334)
                      ...  ...++|+...-+|......+..      .......+|.     -|++.+++.+++  .++.+|++.-.....|.+
T Consensus       162 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-----nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~  236 (454)
T 4ao9_A          162 AALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-----NDAQTARAQIERHGPEIAVVLVEPMQGASGCI  236 (454)
T ss_dssp             HHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-----TCHHHHHHHHHHTGGGEEEEEECSEESTTTCE
T ss_pred             HHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-----chHHHHHHHHhhcCCceEEEEeccccCCCCcc
Confidence            543  2346788887777543211100      1123333332     268888888764  245677766556667877


Q ss_pred             Cc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       235 ~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                      .+    .+++++|++. ++++|+||++.+-....-.....+-.+ +++  +++|.+| .|+.+|.+.+.+++.+.+....
T Consensus       237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~P-Di~--t~gK~lg-gG~Piga~~~~~ei~~~~~~~~  312 (454)
T 4ao9_A          237 PGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRS-DLT--TLGKYIG-GGMSFGAFGGRADVMALFDPRT  312 (454)
T ss_dssp             ECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCC-SEE--EEEGGGG-TTSSCEEEEECHHHHGGGCTTT
T ss_pred             CCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCC-cEE--EeccccC-CCCcceeeeeHHHHHHHHhhcc
Confidence            76    5566667776 999999999974221111111111112 233  5899987 7899999999999998775321


Q ss_pred             ------CCCCCcHHHHHHHHHHhc
Q 019868          310 ------QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       310 ------~~~~~~~~~q~aa~~~L~  327 (334)
                            ..|+.|+++.+++.+.|+
T Consensus       313 ~~~~h~~T~~gnPla~AAala~L~  336 (454)
T 4ao9_A          313 GPLAHSGTFNNNVMTMAAGYAGLT  336 (454)
T ss_dssp             CSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CCccccCCCCCCHHHHHHHHHHHH
Confidence                  236778998888888764

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.17  E-value=3.6e-10  Score=108.71  Aligned_cols=176  Identities=12%  Similarity=-0.035  Sum_probs=124.5

Q ss_pred             HHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCC
Q 019868          133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFS  204 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~  204 (334)
                      .+...+.+.+|++.. ..++++|+|.++...+.+.+++    ++.|+++.-+|.+....+...|+.++.++.   ++.+.
T Consensus       102 ~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~  181 (450)
T 3bc8_A          102 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELR  181 (450)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred             HHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCC
Confidence            455555666788644 4588888885555555545544    899999999999999999999999998874   45678


Q ss_pred             CCHHHHHHhcccCC--ceEEEEeCC-CCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC-Cch-hhhcCCCcEEEE
Q 019868          205 LNVELIADAVEREK--PKCIFLTSP-NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRM-EWVKKHDNLIVL  278 (334)
Q Consensus       205 ~d~~~l~~~l~~~~--~~~i~l~~p-~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~-~~~-~~~~~~~~~i~i  278 (334)
                      +|++.+++++++.+  .+++++.+| ++.+|.+-+.+++.++++. ++++++|+||....... ... ..+....-+.++
T Consensus       182 id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v  261 (450)
T 3bc8_A          182 TDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV  261 (450)
T ss_dssp             CCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEE
Confidence            99999999996432  456666656 4557789999999999998 99999999998643211 111 111112345788


Q ss_pred             cCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK  309 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~  309 (334)
                      .|..|.+. .-...+++.. +++.++.+....
T Consensus       262 ~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~  292 (450)
T 3bc8_A          262 QSLDKNFM-VPVGGAIIAGFNEPFIQDISKMY  292 (450)
T ss_dssp             EEHHHHHS-CCSSCEEEEESCHHHHHHHHHHS
T ss_pred             ECCccCCC-chhccEEEEecCHHHHHHHHHHh
Confidence            99999764 3344566665 667777665543

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.13  E-value=3.2e-10  Score=108.44  Aligned_cols=164  Identities=12%  Similarity=-0.016  Sum_probs=118.0

Q ss_pred             CCCC-CCEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhc
Q 019868          143 GLES-DHILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV  214 (334)
Q Consensus       143 ~~~~-~~I~~t~G~~~~i~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l  214 (334)
                      |++. ...++++|+|.++..++.+.+++    ||+|+++..+|.+....+...|++++.++.   ++..++|++++++++
T Consensus       130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI  209 (501)
T 3hl2_A          130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKV  209 (501)
T ss_dssp             TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHH
T ss_pred             CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHH
Confidence            7764 35888999997777777767664    499999999999999999999999999974   445789999999999


Q ss_pred             ccC--CceEEEEe-CCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCC-cEEEEcCCchhhccc
Q 019868          215 ERE--KPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHD-NLIVLRTFSKRAGLA  288 (334)
Q Consensus       215 ~~~--~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~-~~i~i~S~SK~~gl~  288 (334)
                      ++.  +..++++. .++|-.|.+-+.+++.++++. ++++++||||.... +-.......-..+ -++++.|..|++-++
T Consensus       210 ~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp  289 (501)
T 3hl2_A          210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP  289 (501)
T ss_dssp             HHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC
T ss_pred             HhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee
Confidence            753  23344433 556655677899999999988 99999999997543 1111111111122 568999999987544


Q ss_pred             ccchheeE-c-CHHHHHHHHHh
Q 019868          289 GLRVGYGA-F-PLSIIEYLWRA  308 (334)
Q Consensus       289 G~R~G~l~-~-~~~~i~~l~~~  308 (334)
                       .. |.++ . ++++++.+...
T Consensus       290 -IG-G~ii~~~d~e~l~~~~~~  309 (501)
T 3hl2_A          290 -VG-GAIIAGFNDSFIQEISKM  309 (501)
T ss_dssp             -SS-CEEEEESCHHHHHHHHHT
T ss_pred             -cC-ceEEEeCCHHHHHHHHHh
Confidence             22 4444 3 67788876443

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.08  E-value=4.7e-10  Score=106.88  Aligned_cols=206  Identities=16%  Similarity=0.103  Sum_probs=130.8

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcC---cCCCCCCC------cC----hHH-HHHHHHHhcCCCCC----CEEEeCCHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE----SRR-LRAALAKDSGLESD----HILVGCGADEL  158 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp~------~g----~~~-lr~~lA~~~~~~~~----~I~~t~G~~~~  158 (334)
                      -|.|=..||-  .++.|.+++...   .+..+||.      ..    .+. .++...++++++..    ||..-+|+. +
T Consensus        56 ~ieLIASEN~--~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~-A  132 (490)
T 3ou5_A           56 GLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-A  132 (490)
T ss_dssp             SEECCTTCCC--CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-H
T ss_pred             CceEecCCCc--CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHH-H
Confidence            3788777775  468899998763   23444543      11    122 23344567898876    678777775 5


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHH--------HHCCC--eEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~G~--~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      ...++.+|++|||+|+..+..++.+...-        ...|.  +.+.++. .++..+|.|++++.....++|+|++-.-
T Consensus       133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S  212 (490)
T 3ou5_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc
Confidence            56677779999999999888776543211        11222  3333442 3567899999999988789999998765


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH------
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------  299 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~------  299 (334)
                      .+|  ..++-+++++|++. |.++++|.+|. ++...+-....+..  ..++..|..|++  .|.|.|.|.+++      
T Consensus       213 aY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~--ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~  286 (490)
T 3ou5_A          213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--ADIVTTTTHKTL--RGARSGLIFYRKGVKAVD  286 (490)
T ss_dssp             SCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSSTT--CSCSCEEEEEECSEEEEC
T ss_pred             cCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc--ceEEeccccccc--cCCCceEEEecccccccc
Confidence            555  67899999999998 99999999984 34322211111222  248899999985  699999999865      


Q ss_pred             ---------HHHHHHHHhcCC
Q 019868          300 ---------SIIEYLWRAKQP  311 (334)
Q Consensus       300 ---------~~i~~l~~~~~~  311 (334)
                               ++.+.+.+.-.+
T Consensus       287 ~k~~~~~~~~~~kkin~aVFP  307 (490)
T 3ou5_A          287 PKTGREIPYTFEDRINFAVFP  307 (490)
T ss_dssp             C--CCEEECCCHHHHHHHHTT
T ss_pred             ccccchhHHHHHHHHHhhcCc
Confidence                     456667766655

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=98.94  E-value=1.5e-08  Score=98.17  Aligned_cols=233  Identities=13%  Similarity=0.133  Sum_probs=146.3

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-C---cCCCCC--CCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPYIY--PDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~~Y--p~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..|  ...++ ..|++.+|+++ +   .+...+  |.....+|.+.|++....+ .+.++++++++++..
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e  139 (456)
T 4atq_A           60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVE  139 (456)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHH
Confidence            4467788998665  45555 56888888765 2   222222  4444567888888888643 568999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHHH-HCC-------------CeEEEeeCCC-----C-CCCCHHHHH-------
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKS-----D-FSLNVELIA-------  211 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G-------------~~v~~v~~~~-----~-~~~d~~~l~-------  211 (334)
                      .+++.-.  ....+|+...-+|......+. ..|             ..+..+|...     . ..-+.+.++       
T Consensus       140 ~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e  219 (456)
T 4atq_A          140 NAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIE  219 (456)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHH
Confidence            9988432  334788888888865433222 111             1344444211     1 111233322       


Q ss_pred             HhcccCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchh
Q 019868          212 DAVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKR  284 (334)
Q Consensus       212 ~~l~~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~  284 (334)
                      +.+..+++.+|++.-...-.|.+.+    .+.++++++. |+++|+||++.+|...+.....  .+- ..+++  +++|.
T Consensus       220 ~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~  296 (456)
T 4atq_A          220 KQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDII--TMAKG  296 (456)
T ss_dssp             HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEE--EECGG
T ss_pred             HhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchh--hhhhc
Confidence            2233345667777654555676654    3555666666 9999999999987643332221  111 12244  47899


Q ss_pred             hcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       285 ~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +| .|+.+|.+++.+++.+.+....  ..|+-++++.+++.+.|+
T Consensus       297 lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~  340 (456)
T 4atq_A          297 IA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAID  340 (456)
T ss_dssp             GG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             cc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence            87 7899999999999887665433  237889999999988875

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=98.93  E-value=8.1e-09  Score=106.93  Aligned_cols=228  Identities=12%  Similarity=0.161  Sum_probs=139.4

Q ss_pred             CeeecCCC--CCCCC-C-CHHHHHHHhc-Cc-CCC----CCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHH
Q 019868           96 DIVKIDAN--ENPYG-P-PPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (334)
Q Consensus        96 ~~i~l~~~--~~~~~-~-~~~v~~al~~-~~-~~~----~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+..+  .+.++ . .|++.+|+++ +. ..+    .+......+|.+.|++..+-. .+.++++++++++.+.+++
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK  460 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK  460 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence            56777554  34455 3 6888888865 21 111    122223457888888887643 4689999999999999888


Q ss_pred             Hhc-----CCC------------CEEEEcCCCChhH-HHHHHHCCC---------------eE-------------EEee
Q 019868          165 CVL-----DPG------------DKIVDCPPTFTMY-EFDAAVNGA---------------AV-------------VKVP  198 (334)
Q Consensus       165 ~l~-----~~g------------d~Vl~~~p~y~~~-~~~~~~~G~---------------~v-------------~~v~  198 (334)
                      ...     ..|            .+|+...-.|..- .......|.               .+             ..++
T Consensus       461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  540 (831)
T 4a0g_A          461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNIS  540 (831)
T ss_dssp             HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEE
T ss_pred             HHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEec
Confidence            642     222            3688777777533 333333221               00             1112


Q ss_pred             CCCCCC---------CC------------------HHHHHHhccc-------CCceEEEEeCC-CCccccCC-cH---HH
Q 019868          199 RKSDFS---------LN------------------VELIADAVER-------EKPKCIFLTSP-NNPDGSII-ND---ED  239 (334)
Q Consensus       199 ~~~~~~---------~d------------------~~~l~~~l~~-------~~~~~i~l~~p-~NPtG~~~-~~---~~  239 (334)
                      ....+.         -|                  .+.+++.+++       +++.+|++... .+..|... +.   ++
T Consensus       541 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~  620 (831)
T 4a0g_A          541 LPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRV  620 (831)
T ss_dssp             CCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHH
T ss_pred             CCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHH
Confidence            111100         01                  2567777642       34566776653 68888776 44   44


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHh-------
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------  308 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~-------  308 (334)
                      ++++++. ++++|+||++.+|...+....  ..+-.+. ++  +|+|.++ .| +++|++++++++++.+...       
T Consensus       621 l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD-ii--tlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~  696 (831)
T 4a0g_A          621 LVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPD-IA--CFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALL  696 (831)
T ss_dssp             HHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCS-EE--EECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCC
T ss_pred             HHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCc-EE--EEecccc-cCccCcEEEEECHHHHHHHhcccccccce
Confidence            5555555 999999999998864333221  1222222 33  6999987 47 7999999999999987542       


Q ss_pred             -cCCCCCcHHHHHHHHHHhc
Q 019868          309 -KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       309 -~~~~~~~~~~q~aa~~~L~  327 (334)
                       ...|+.++++++++.++|+
T Consensus       697 hg~T~~g~Pla~Aaala~L~  716 (831)
T 4a0g_A          697 HGHSYSAHAMGCATAAKAIQ  716 (831)
T ss_dssp             CCCTTTTCHHHHHHHHHHHH
T ss_pred             eecCCcccHHHHHHHHHHHH
Confidence             2337789999999998775

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=98.85  E-value=7.9e-08  Score=93.46  Aligned_cols=233  Identities=15%  Similarity=0.125  Sum_probs=142.1

Q ss_pred             CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-Cc---CCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+-  ..++ ..|++.+++.+ +.   ....+   +.....+|-+.|++..+.+.+.|+++++++++.+
T Consensus        63 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e  142 (473)
T 4e3q_A           63 DVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAND  142 (473)
T ss_dssp             ETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHH
Confidence            34677889986653  3444 46888888765 32   21122   2223456778888888766779999999999999


Q ss_pred             HHHHHhc-------CCC-CEEEEcCCCChhHHH-HHHHCCC-----------eEEEeeCC------CCCCCC-------H
Q 019868          161 LIMRCVL-------DPG-DKIVDCPPTFTMYEF-DAAVNGA-----------AVVKVPRK------SDFSLN-------V  207 (334)
Q Consensus       161 ~~~~~l~-------~~g-d~Vl~~~p~y~~~~~-~~~~~G~-----------~v~~v~~~------~~~~~d-------~  207 (334)
                      .+++...       .++ .+|+...-+|..... .....|-           ....++..      .....+       .
T Consensus       143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  222 (473)
T 4e3q_A          143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLA  222 (473)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHH
Confidence            9998532       233 577877777764332 2222221           12222211      111111       2


Q ss_pred             HHHHHhccc---CCceEEEEeCCCCccccCCc-H---HHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEE
Q 019868          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIV  277 (334)
Q Consensus       208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~-~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~  277 (334)
                      +++++.+..   +++.+|++.-...-.|.+.+ .   ++++++++. ++++|.||+..+|...+.....  .+- ..+++
T Consensus       223 ~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~  301 (473)
T 4e3q_A          223 RELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAI  301 (473)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEE
T ss_pred             HHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChH
Confidence            334444432   34556666544555676654 3   455566665 9999999999998654433221  111 12243


Q ss_pred             EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~  327 (334)
                        +++|.++ .| +.+|.+++.+++.+.+...         ...|+-|+++.+++.+.|+
T Consensus       302 --t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~  358 (473)
T 4e3q_A          302 --ISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID  358 (473)
T ss_dssp             --EECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             --Hhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhh
Confidence              4799987 55 8999999999999887542         2237789999998888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	334
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	1e-33
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-32
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	2e-32
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	5e-30
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	6e-26
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	3e-20
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-16
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	5e-14
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-12
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	1e-11
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	1e-11
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	1e-11
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	6e-11
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	8e-11
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-10
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	2e-10
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	2e-08
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	3e-08
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	1e-07
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	7e-07
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	2e-05
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	5e-05
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	1e-04

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  126 bits (317), Expect = 1e-33
 Identities = 34/228 (14%), Positives = 67/228 (29%), Gaps = 37/228 (16%)

Query: 123 PYIYPD---PESRRLRAALAKDSGL------ESDHILVGCGADELIDLIMR--------C 165
            Y +       S  L   + +   +      +  +I+ G G  +LI  ++          
Sbjct: 91  SYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTAT 150

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225
              P  K+V   P + ++                   ++ N     +     +     +T
Sbjct: 151 PDAPESKVVAHAPFYPVFREQTKYFDKKGY------VWAGNAANYVNVSN-PEQYIEMVT 203

Query: 226 SPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
           SPNNP+G + +           ++      Y              K D  I+L T SK  
Sbjct: 204 SPNNPEGLLRHA----------VIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT 253

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQNPI 330
           G +G R G+       +          N        ++ +   L+  +
Sbjct: 254 GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVV 301

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  123 bits (308), Expect = 1e-32
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 27/232 (11%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALAK--- 140
           +    +D++ +   E  +  P  ++E        G   +       E   LR A+A+   
Sbjct: 20  IAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLE---LREAIAEKLK 76

Query: 141 ----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
                       I+V  GA++   + +   L  G++++   P F  Y     + G   V+
Sbjct: 77  KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136

Query: 197 VPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILV 250
           VP   +  F LNV+ +   V  +K + + + SP NP G+++  +DL +I +      ++V
Sbjct: 137 VPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIV 195

Query: 251 VLDEAYTEFSGLESRMEWVKK----HDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           + DE Y  F   ++R   +       +  I +  FSK   + G R+G+ A P
Sbjct: 196 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP 247

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  122 bits (306), Expect = 2e-32
 Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 18/262 (6%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP 123
             +   ++ +KP    +     +++L R+  D+V + A E  +  P  V+EA  + L   
Sbjct: 2   RGLSRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60

Query: 124 YI-YPDPE-SRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175
              Y  P     LR ALA+         +  +  +V  G  + +  + + +LDPGD+++ 
Sbjct: 61  KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIV 120

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDF--SLNVELIADAVEREKPKCIFLTSPNNPDGS 233
             P +  Y       G  VV+V    +     + E +  A+   + K + + SPNNP G+
Sbjct: 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI-TPRTKALVVNSPNNPTGA 179

Query: 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLA 288
           +   E L  +  +       +V DE Y             +   ++ + +   +K   + 
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239

Query: 289 GLRVGYGAFPLSIIEYLWRAKQ 310
           G R+GY   P  +I+ +    +
Sbjct: 240 GWRIGYACGPKEVIKAMASVSR 261

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  115 bits (289), Expect = 5e-30
 Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 28/263 (10%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPY 124
           +  + P    L  +  +  +  +  D+    A E  +  P  + EA       G+ ++  
Sbjct: 7   VESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGP 65

Query: 125 IYPDPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              +P    LR A+A+           +D+ILV  G  + I  +M  +++PGD+++   P
Sbjct: 66  AAGEPR---LREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y     +     V +P   +  F ++ E I  A+   K K +   +P+NP G +  
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYT 181

Query: 237 DEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWVKK-----HDNLIVLRTFSKRAGL 287
            +++  I     E  + V+ DE Y +    +++   +       ++  +V   F+K   +
Sbjct: 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G RVG+ A P+ +++   + + 
Sbjct: 242 TGWRVGFLAGPVPLVKAATKIQG 264

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score =  103 bits (257), Expect = 6e-26
 Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 24/274 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 5   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLNR- 52

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG   +   P   
Sbjct: 53  ----YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 108

Query: 182 MY-EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-- 238
                 A   G     VP   ++ L+++ I+D  + +  K +++ SPNNP G +IN +  
Sbjct: 109 GMYSVSAETIGVECRTVPTLDNWQLDLQGISD--KLDGVKVVYVCSPNNPTGQLINPQDF 166

Query: 239 -DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             LL++     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 167 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 226

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331
              +I  L +   PY +S      A  AL     
Sbjct: 227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI 260

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 87.9 bits (216), Expect = 3e-20
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 3/98 (3%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + + 
Sbjct: 16  VLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPAS 75

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
            IL G G  E I  +   +     + +   P F  Y  
Sbjct: 76  WILAGNGETESIFTVASGLKPR--RAMIVTPGFAEYGR 111

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.2 bits (186), Expect = 3e-16
 Identities = 51/245 (20%), Positives = 91/245 (37%), Gaps = 18/245 (7%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
           +   + ++      +  +  +  L +K ED++ + A E  +  P  V E   +   K   
Sbjct: 1   VSRRISEIPIS-KTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV 59

Query: 125 IYPDPE-SRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDC 176
            Y DP     LR  +AK         +  D ++V  GA + +      +LDPGD+ IV  
Sbjct: 60  KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
           P   +         G   V     S          + +   K K + + SPNNP G +  
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR 179

Query: 237 DEDLLKILEM---PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRAGLAG 289
            E L  ++ +       ++ +   +          +    +  D ++ +  FSK   + G
Sbjct: 180 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG 239

Query: 290 LRVGY 294
            RVGY
Sbjct: 240 WRVGY 244

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score = 70.0 bits (170), Expect = 5e-14
 Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 32/270 (11%)

Query: 89  QLGRKPEDIVKI---DANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALA 139
           +L +K   ++++   D  +  + PP  ++EA       G   +      PE   LR A+ 
Sbjct: 24  ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPE---LRKAIV 80

Query: 140 KDSGLE------SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           +    +       D + V     E + LI   +LDPGD+I+   P++  Y       G  
Sbjct: 81  EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGK 140

Query: 194 VVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPI 248
            V+    + +              ++ K I + +PNNP G++ + + L +IL    E  I
Sbjct: 141 PVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEI 200

Query: 249 LVVLDEAYTEFSGLESRMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSI 301
            V+ DE Y   +     +      K   +IV+   SK     G R+GY  F      LS 
Sbjct: 201 PVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE 260

Query: 302 IEYLWR--AKQPYNVSVAAEVAACAALQNP 329
           +       A+     +  A+ AA A L  P
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGLTGP 290

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.4 bits (155), Expect = 3e-12
 Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 15/252 (5%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
               K       F  +S  L ++    V +        PPP + EA+ + L     Y  P
Sbjct: 7   TEAAKES----IFPRMS-GLAQRL-GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPP 60

Query: 130 E-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
                LR ALA++  +E + ++V  GA E + ++++ ++ PGD++V   P F +Y  DA 
Sbjct: 61  AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAF 120

Query: 189 VNG--AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           + G  A +V++    +         +     + + + L +P NP G +  + +L  I  +
Sbjct: 121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180

Query: 247 ---PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
                L ++ +   +      R         +    + +  KR    G RVG+   P   
Sbjct: 181 ARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240

Query: 302 IEYLWRAKQPYN 313
           +  L   +Q  +
Sbjct: 241 MPRLAGMRQWTS 252

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 63.1 bits (152), Expect = 1e-11
 Identities = 39/256 (15%), Positives = 71/256 (27%), Gaps = 24/256 (9%)

Query: 97  IVKIDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           I    +  + Y P     E R    +L      P  + +R+    +              
Sbjct: 60  IANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS------LGGTGALR 113

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213
              E +        +    +    PT+  +       G   ++  R  D       +   
Sbjct: 114 IGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGF 173

Query: 214 VEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS--GL 262
           +   +        +     +NP G+    E   +I  +     +    D AY  F+   L
Sbjct: 174 LSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233

Query: 263 E----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           E    +   +V +   L   ++FSK  GL   RVG         + + R        V  
Sbjct: 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRV 293

Query: 319 EVAACAALQNPIYLEV 334
             +   A    I    
Sbjct: 294 TWSNPPAQGARIVART 309

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 62.7 bits (151), Expect = 1e-11
 Identities = 29/269 (10%), Positives = 67/269 (24%), Gaps = 47/269 (17%)

Query: 92  RKPEDIVKIDANENPY-----------GPPPEVREALGQLKFPYI--YPDPE-SRRLRAA 137
                I+++   EN              P     +  G+  F  +  + D       + A
Sbjct: 33  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 92

Query: 138 LAK--------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           +              + +H+++  GA    +  + C+ DPG+ ++   P +  ++ D   
Sbjct: 93  MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 152

Query: 190 NGAAVVKVPRKSDFSLNVELIAD------AVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                +     +  +                E+   +   +   N  +            
Sbjct: 153 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 212

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKH-------------------DNLIVLRTFSKR 284
           L +  +                                            + V+ + SK 
Sbjct: 213 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 272

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
            GL G RVG       ++         + 
Sbjct: 273 LGLPGFRVGAIYSNDDMVVAAATKMSSFG 301

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.5 bits (150), Expect = 1e-11
 Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 13/218 (5%)

Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP 127
             +   +   PI      +    ++   I  ++  +     P    E + +       Y 
Sbjct: 3   DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYS 61

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
                  LR A A          ++ +++LV  G  E I      + +PGD+I+   P +
Sbjct: 62  HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFY 121

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
             Y   A + G  ++ V R+ +    +    ++   E+ K I L++P NP G +   +++
Sbjct: 122 ANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 181

Query: 241 LKILE----MPILVVLDEAYTEFSGLESRMEWVKKHDN 274
             ++E      + +++DE Y+E          +    +
Sbjct: 182 RYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESD 219

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.6 bits (145), Expect = 6e-11
 Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 32/250 (12%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIY 126
            ++  PY+              +  D   +  NENP+  P ++ +     L        Y
Sbjct: 8   AKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRI-Y 53

Query: 127 PDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            D     L   +        L  +++ VG GADE+I ++M       D+ V  PPT++ Y
Sbjct: 54  YDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCY 109

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A   GA  ++VP   D  +            +   +F+ +PNNP G +   E++ +I
Sbjct: 110 RIFAKAVGAKFLEVPLTKDLRIPEV------NVGEGDVVFIPNPNNPTGHVFEREEIERI 163

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           L+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY       I+
Sbjct: 164 LKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFID 222

Query: 304 YLWRAKQPYN 313
              R + P+N
Sbjct: 223 AYNRVRLPFN 232

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 60.4 bits (145), Expect = 8e-11
 Identities = 48/259 (18%), Positives = 80/259 (30%), Gaps = 39/259 (15%)

Query: 99  KID----ANENPYGPPPE---VREALGQL----KFPYIYPDPE-SRRLRAALAK------ 140
           K+D    A  +  G P     V+ A   +     + + Y        L +  AK      
Sbjct: 31  KVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQ 90

Query: 141 -DSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
            D+  E   I V          I         P   +    PT+  +       G     
Sbjct: 91  SDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTAT 150

Query: 197 VPRKS----DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PI 248
            P  +       LN  L A     E    +  +  +NP G     E  ++I++       
Sbjct: 151 YPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNH 210

Query: 249 LVVLDEAYTEFS---------GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + + D AY  F+          +   +E +     + V ++F+K AG+ G RVG     L
Sbjct: 211 IALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLAL 270

Query: 300 SIIEYLWRAKQPYNVSVAA 318
           +        K      +A 
Sbjct: 271 TKQAQNKTIKPAVTSQLAK 289

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 59.2 bits (142), Expect = 2e-10
 Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 25/236 (10%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK-------DSGLESDHI 149
           DA  +       V  A  ++   +    Y         + A+ +        S   +   
Sbjct: 38  DATGHTP-IMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLA 96

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE- 208
            VG        L +  + +P  ++    PT+  +       G  V         +  V+ 
Sbjct: 97  TVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156

Query: 209 ---LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG 261
                  A  ++    +     +NP G+ +  +   +I     +   L ++D AY  F  
Sbjct: 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGD 216

Query: 262 LE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312
                         +   +++  + SK  G+   R G      +       A+   
Sbjct: 217 GLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAM 272

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 59.3 bits (142), Expect = 2e-10
 Identities = 48/262 (18%), Positives = 84/262 (32%), Gaps = 38/262 (14%)

Query: 88  IQLG----RKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPE-SRRLRAALAK-- 140
           IQ+G    +   D+++     NP        E +   K    + D       R A+AK  
Sbjct: 39  IQMGLAENQLCLDLIEDWIKRNP--KGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFM 96

Query: 141 ------DSGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAAVNGAA 193
                     + + +++  GA    + I+ C+ DPGD  +V  P             G  
Sbjct: 97  EKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156

Query: 194 VVKVPRKSDFSLNVELIAD-------AVEREKPKCIFLTSPNN----PDGSIINDEDLLK 242
           ++ +  +S  +  +   A             K K + LT+P+N              L  
Sbjct: 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF 216

Query: 243 ILEMPILVVLDEAYTEFSGLESRMEWVK-----------KHDNLIVLRTFSKRAGLAGLR 291
             +  I +V DE Y        +   +              D + ++ + SK  GL G R
Sbjct: 217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFR 276

Query: 292 VGYGAFPLSIIEYLWRAKQPYN 313
           VG        +    R    + 
Sbjct: 277 VGIIYSFNDDVVNCARKMSSFG 298

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 53.1 bits (126), Expect = 2e-08
 Identities = 39/258 (15%), Positives = 71/258 (27%), Gaps = 28/258 (10%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK----------DSGLES 146
           D           V++A   L   +    Y   +          +          +     
Sbjct: 38  DETGKTP-VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRAR 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
                G      +            ++    P++  ++      G  V +       +  
Sbjct: 97  TAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156

Query: 207 VELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE 258
           ++  A              +F    +NP G     E    + ++      L + D AY  
Sbjct: 157 LDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQG 216

Query: 259 F-SGLE----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
           F  GLE        +   H  LIV  ++SK  GL   RVG      +  E + RA     
Sbjct: 217 FARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK 276

Query: 314 VSVAAEVAACAALQNPIY 331
            ++ A  +   A    + 
Sbjct: 277 AAIRANYSNPPAHGASVV 294

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 52.2 bits (123), Expect = 3e-08
 Identities = 8/85 (9%), Positives = 24/85 (28%), Gaps = 3/85 (3%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
            N+   G  P++ + + +  +     Y  D    +    + +        +    G  + 
Sbjct: 5   VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQT 64

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMY 183
             +     L P + ++         
Sbjct: 65  NLIACSLALRPWEAVIATQLGHIST 89

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 52/250 (20%), Positives = 90/250 (36%), Gaps = 31/250 (12%)

Query: 95  EDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPE-SRRLRAALA----KDSGLE 145
            D+V +      + PP    EA             Y        L   LA    +  G E
Sbjct: 25  HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQE 84

Query: 146 SD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
            D   ++LV  G    +    + ++D GD+++   P F  YE    + G   V V  K  
Sbjct: 85  IDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPG 144

Query: 203 FSLNVELIADA-----------VEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMP 247
              N EL + +               + K + L +PNNP G + + E+L  +     +  
Sbjct: 145 PIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHD 204

Query: 248 ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++ + DE Y    + G +  S        +  + + +  K     G +VG+   P  I++
Sbjct: 205 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 264

Query: 304 YLWRAKQPYN 313
           +L    Q   
Sbjct: 265 HLRTVHQNSV 274

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 47.9 bits (112), Expect = 7e-07
 Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 107 YGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           +   P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     +
Sbjct: 11  FATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           +  ++R   + G+ +V   P +  +      N   V+ V 
Sbjct: 71  VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVA 110

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 3/98 (3%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
           +++N  G  PEV +AL +        Y  D  + +++    +    + +  LV  G    
Sbjct: 8   SSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAAN 67

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
              +       G+            E  A    +   K
Sbjct: 68  ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAK 105

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.1 bits (97), Expect = 5e-05
 Identities = 36/230 (15%), Positives = 63/230 (27%), Gaps = 15/230 (6%)

Query: 108 GPPPEVREALGQLKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165
            P  E+R+A+ Q +        DP    L    A+  G E   + V  G       IM  
Sbjct: 11  KPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE-AALFVPSGTMGNQVSIMAH 69

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN------VELIADAVEREKP 219
                + I++       YE  A    + V+  P                +    +   + 
Sbjct: 70  TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRT 129

Query: 220 KCIFLTSPNNPDGSII-NDEDLLKILEMP-----ILVVLDEAYTEFSGLESRMEWVKKHD 273
             I + + +N  G  +   E++ +I  +       + +        S             
Sbjct: 130 SLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY 189

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323
              V+   SK        V  G           R      +  A  +AA 
Sbjct: 190 ADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAA 239

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 46/263 (17%), Positives = 96/263 (36%), Gaps = 27/263 (10%)

Query: 72  RKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYI 125
            KL      + F  +S  L ++    + +      +  P  ++E L      G  ++  +
Sbjct: 6   SKLPQLGTTI-FTQMS-ALAQQH-QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPM 62

Query: 126 YPDPESRRLRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   LR A+A    +  G + D    I V  GA E +   +  ++  GD+++   P
Sbjct: 63  TGVQA---LREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDP 119

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           ++  Y    A++G  V ++  +            A+  E+ + + L +P+NP  ++    
Sbjct: 120 SYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 179

Query: 239 DLLKILEMP--------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D   + +             V +       G  S +   +  +  + + +F K   + G 
Sbjct: 180 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGW 239

Query: 291 RVGYGAFPLSIIEYLWRAKQPYN 313
           +VGY   P  I   + +  Q   
Sbjct: 240 KVGYCVAPAPISAEIRKVHQYLT 262

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	334
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.97
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.97
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.95
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.89
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.89
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.85
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.76
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.76
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.73
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.71
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.69
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.68
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.68
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.63
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.62
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.61
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.61
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.6
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.59
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.58
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.57
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.55
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.54
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.53
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.52
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.5
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.49
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.48
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.46
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.42
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.4
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.38
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.38
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.36
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.35
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.35
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.34
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.32
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.31
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.29
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.24
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.23
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.22
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.22
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.15
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.1
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.06
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	98.99
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	98.99
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	98.97
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	98.86
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	98.79
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	98.74
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	98.73
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	98.67
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	98.67
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	98.51
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.29
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.22
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	98.18
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	97.91
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	97.56

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.3e-44  Score=338.35  Aligned_cols=260  Identities=23%  Similarity=0.369  Sum_probs=223.9

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCC-CcChHHHHHHHHHhc--
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDS--  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~lA~~~--  142 (334)
                      ++++..++|+ ++..+...++++...+.++|+|++|++++++|+++++++.+ +. ...+|+ ..|.++||+++++++  
T Consensus         5 ~~r~~~~~~s-~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~   83 (382)
T d1b5pa_           5 SRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRR   83 (382)
T ss_dssp             CHHHHHCCCC-HHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCC-HHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhh
Confidence            5677778888 45566667777777788999999999999999999999876 33 346794 558999999999987  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc
Q 019868          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (334)
Q Consensus       143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~  216 (334)
                          ++++++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++.  ++++.+|++++++.++ 
T Consensus        84 ~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-  162 (382)
T d1b5pa_          84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-  162 (382)
T ss_dssp             TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-
T ss_pred             hcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-
Confidence                578899999999999999999999999999999999999999999999999999984  3568899999999997 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLR  291 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R  291 (334)
                      ++++++++|+||||||.+++.+++++|++.    +++||+||+|.++.+++.. .......+++++++||||.|+++|+|
T Consensus       163 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR  242 (382)
T d1b5pa_         163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWR  242 (382)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGC
T ss_pred             CCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHhh
Confidence            689999999999999999999999999875    9999999999999865432 22233568999999999999999999


Q ss_pred             hheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          292 VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       292 ~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      +||+++++++++.+.+.+..  .+.+.+.|.++..++.+.
T Consensus       243 ~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (382)
T d1b5pa_         243 IGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQ  282 (382)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCH
T ss_pred             eEEEEECHHHHHHHHHHHHhcccCcccccccccccccccc
Confidence            99999999999988776554  567888888888877664

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=2.1e-43  Score=335.21  Aligned_cols=263  Identities=23%  Similarity=0.357  Sum_probs=225.8

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc--
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS--  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~--  142 (334)
                      ++++.+++++ ++..+...++++...+.++|+|+.|++++++|+.+++++++ ++ ...+| |..|.++||+++|+++  
T Consensus         4 ~~~~~~~~~s-~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   82 (388)
T d1j32a_           4 AARVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQR   82 (388)
T ss_dssp             CHHHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhHhhcCCcC-HHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            4568888888 56677778888888888999999999999999999999876 33 23668 5568999999999986  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc
Q 019868          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (334)
Q Consensus       143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~  216 (334)
                          .+++++|++|+|+++++..++.++++|||+|++++|+|+.|...++..|++++.++.  +++|.+|++++++.++ 
T Consensus        83 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~-  161 (388)
T d1j32a_          83 DNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-  161 (388)
T ss_dssp             HHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-
T ss_pred             hcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-
Confidence                468899999999999999999999999999999999999999999999999999884  3568899999999997 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh-h--h--cCCCcEEEEcCCchhhcc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-W--V--KKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~-~--~--~~~~~~i~i~S~SK~~gl  287 (334)
                      ++++++++++||||||.+++.+++++|++.    +++||+||+|.++.++..... .  .  ...+++++++||||.|++
T Consensus       162 ~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~  241 (388)
T d1j32a_         162 PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM  241 (388)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTC
T ss_pred             CCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhc
Confidence            689999999999999999999999999875    999999999999887543211 1  1  124689999999999999


Q ss_pred             cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868          288 AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       288 ~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~-~~~~  332 (334)
                      +|+|+||+++++++++.+.+....  .+++..+|.++..++.+ .+|+
T Consensus       242 ~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~  289 (388)
T d1j32a_         242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCV  289 (388)
T ss_dssp             TTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHH
T ss_pred             chhHeEEEEECHHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHH
Confidence            999999999999999988776654  67889999999888875 3443

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-42  Score=325.45  Aligned_cols=253  Identities=34%  Similarity=0.561  Sum_probs=221.6

Q ss_pred             CCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHh
Q 019868           62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD  141 (334)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~  141 (334)
                      +.+.++|+.++++.||.+.+.       .|  ....|+|+.||+|+++++.+.+     ...++||+++..+||+++|++
T Consensus         3 ~~~~l~~~~i~~~~~y~~~~~-------~~--~~~~i~L~~ne~p~~~~~~~~~-----~~l~rYPd~~~~~Lr~~ia~~   68 (354)
T d1fg7a_           3 TITDLARENVRNLTPYQSARR-------LG--GNGDVWLNANEYPTAVEFQLTQ-----QTLNRYPECQPKAVIENYAQY   68 (354)
T ss_dssp             CHHHHSCHHHHHCCCCCCCCC-------CT--TTCSEECSSCCCSSCCCCCCCC-----CCTTSCCCSSCHHHHHHHHHH
T ss_pred             ChHHhhChhhccCCCCCchhh-------cC--CCCCEEeeCCCCCCCCCHHHHH-----HHHhcCCCCcHHHHHHHHHHH
Confidence            445667899999999975431       22  3457999999999998764422     234789999889999999999


Q ss_pred             cCCCCCCEEEeCCHHHHHHHHHHHhcCCCC-EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          142 SGLESDHILVGCGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       142 ~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +|+++++|++|+|++++|..+++++++||| +|+++.|+|..|...++..|.+++.++.+++|.+|+++++..+.  +++
T Consensus        69 ~gv~pe~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~~--~~~  146 (354)
T d1fg7a_          69 AGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVK  146 (354)
T ss_dssp             HTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEE
T ss_pred             hCCChHHeeeccCchHHHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhhhhccc--ccc
Confidence            999999999999999999999999999998 68899999999999999999999999988899999999998774  799


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      +|++|+||||||.+++.++++.+++.   +.++|+||+|.+|.++.........++++++++||||.||++|+|+||+++
T Consensus       147 ~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~  226 (354)
T d1fg7a_         147 VVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA  226 (354)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE
T ss_pred             eeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEEeCCccccCCCccccccccc
Confidence            99999999999999999999888764   899999999999986555555566789999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       298 ~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      ++++++.+.+...+++++.++|.++.+++.+..
T Consensus       227 ~~~~i~~l~~~~~~~~~~~~~~~~a~~~~~~~~  259 (354)
T d1fg7a_         227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQG  259 (354)
T ss_dssp             CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHH
T ss_pred             cchhhhhhhhhcCccchhhHHHHHHHHHHhhhc
Confidence            999999999999999999999998888887643

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=4.1e-42  Score=325.37  Aligned_cols=259  Identities=24%  Similarity=0.378  Sum_probs=216.2

Q ss_pred             HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC-CCCC-CCcChHHHHHHHHHhc-
Q 019868           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDS-  142 (334)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y-p~~g~~~lr~~lA~~~-  142 (334)
                      ++.+++.++++. ++.+..++..    .+++|+|+.|++++++|+.+++++.+ ++. ..+| |..|..+||+++|+++ 
T Consensus         2 ~s~~~~~~~~s~-ir~~~~~~~~----~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~   76 (388)
T d1gdea_           2 LSDRLELVSASE-IRKLFDIAAG----MKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLK   76 (388)
T ss_dssp             HHHHHHHSCCCH-HHHHHHHHHH----CTTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhhhhCCccH-HHHHHHHHhC----CCCeEECCCCCCCCCCCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHH
Confidence            356666666653 3333333332    35789999999999999999998876 332 3678 5568999999999986 


Q ss_pred             ------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhc
Q 019868          143 ------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAV  214 (334)
Q Consensus       143 ------~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l  214 (334)
                            ..++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.  +++|.+|++++++.+
T Consensus        77 ~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~  156 (388)
T d1gdea_          77 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV  156 (388)
T ss_dssp             HHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHC
T ss_pred             hhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhC
Confidence                  245679999999999999999999999999999999999999999999999999985  356899999999999


Q ss_pred             ccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc----hhhhcCCCcEEEEcCCchhhc
Q 019868          215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      + ++++++++++||||||.+++.+++++|++.    +++||+||+|.++.+.+..    .......+++++++||||.||
T Consensus       157 ~-~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  235 (388)
T d1gdea_         157 T-DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA  235 (388)
T ss_dssp             C-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred             c-cCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhcc
Confidence            7 689999999999999999999999999875    9999999999999864322    222234578999999999999


Q ss_pred             ccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchh
Q 019868          287 LAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       287 l~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~  331 (334)
                      ++|+|+||+++++++++.+.+....  .+.+.+.|.++..+|+++++
T Consensus       236 ~~GlR~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  282 (388)
T d1gdea_         236 MTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS  282 (388)
T ss_dssp             CGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHH
T ss_pred             CccccEEEEEeeccchhhhhhccccccccccccchhhHHHHHhhccc
Confidence            9999999999999999888776655  56789999999999988654

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=5.4e-39  Score=300.59  Aligned_cols=251  Identities=27%  Similarity=0.411  Sum_probs=214.0

Q ss_pred             CCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHH
Q 019868           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE  157 (334)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~  157 (334)
                      ++.++...++++|.++.++|||+.|+|++++|+.+++++.+ .....+||+++..+||+++|+++++++++|++|+|+++
T Consensus         6 hgg~~~~~~~~~g~~p~~~idls~~~np~~~p~~~~~a~~~~~~~~~~Yp~~~~~~Lr~aia~~~~v~~~~I~~~~g~~~   85 (355)
T d1lc5a_           6 HGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETE   85 (355)
T ss_dssp             SSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHH
T ss_pred             CCCHHHHHHHHhCCChhheEEccCCCCCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCCHHHEEecccHHH
Confidence            56678889999999999999999999999999999999886 44557799888899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++..++..+.  |+.+++..|.|..|.......+++++.++.  ++++.++ +.+++.+. +++++|+++|||||||.++
T Consensus        86 ~~~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~~~v~l~nP~NPtG~~~  161 (355)
T d1lc5a_          86 SIFTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP  161 (355)
T ss_dssp             HHHHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCC-TTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccc-cccceeeeecccCcccccc
Confidence            9998887553  455667789999999998899999998884  3456666 45666665 6899999999999999999


Q ss_pred             cHHHHHHHHhC----CCeEEEccCCcCccCCCC-chhhhcCCCcEEEEcCCchhhcccccchheeEcCHH-HHHHHHHhc
Q 019868          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAK  309 (334)
Q Consensus       236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-~i~~l~~~~  309 (334)
                      +.+++++|++.    ++++|+||+|.+|.+... ........+++++++||||.||++|+|+||++++++ +.+.+.+..
T Consensus       162 ~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~~~~  241 (355)
T d1lc5a_         162 ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ  241 (355)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHS
T ss_pred             hhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccchhhhHHHHhhc
Confidence            99999999875    899999999999886543 334445678999999999999999999999999755 556777777


Q ss_pred             CCCCCcHHHHHHHHHHhcCchhhc
Q 019868          310 QPYNVSVAAEVAACAALQNPIYLE  333 (334)
Q Consensus       310 ~~~~~~~~~q~aa~~~L~~~~~~~  333 (334)
                      .+++.+.++|.++.++|++.++++
T Consensus       242 ~~~~~~~~~~~~a~~~l~~~~~~~  265 (355)
T d1lc5a_         242 MPWSVNALAALAGEVALQDSAWQQ  265 (355)
T ss_dssp             CTTCSCHHHHHHHHHGGGCHHHHH
T ss_pred             CCccccccccccccccccccchhH
Confidence            779999999999999999976653

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=2.1e-39  Score=308.12  Aligned_cols=253  Identities=25%  Similarity=0.376  Sum_probs=204.7

Q ss_pred             CCcHHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcC-CCCCC-CcChHHHHHHHHHhc------CCCCC
Q 019868           80 ILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYP-DPESRRLRAALAKDS------GLESD  147 (334)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~Yp-~~g~~~lr~~lA~~~------~~~~~  147 (334)
                      +..+...++++...|.++|+|++|+|   +|++|+.+++++.+ +.. .++|+ ..|.++||+++|+++      .++++
T Consensus        15 ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~   94 (395)
T d1xi9a_          15 IRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPD   94 (395)
T ss_dssp             ------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             HHHHHHHHHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccccccccc
Confidence            43343445556566788999999986   78999999999876 433 35695 558999999999986      46789


Q ss_pred             CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLT  225 (334)
Q Consensus       148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~~~~~~i~l~  225 (334)
                      +|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++  ..++|.+|++++++.+. +++++++++
T Consensus        95 ~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~-~~~~~v~l~  173 (395)
T d1xi9a_          95 DVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVI  173 (395)
T ss_dssp             GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEE
T ss_pred             ccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhc-ccccEEEec
Confidence            999999999999999999999999999999999999999999999999988  34678999999999997 789999999


Q ss_pred             CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhhhcCCCcEEEEcCCchhhcccccchheeEc--
Q 019868          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--  297 (334)
Q Consensus       226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--  297 (334)
                      +||||||.+++.+++++|++.    +++||.||+|.++.++..  ........+++++++||||.|+++|+|+||+++  
T Consensus       174 ~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~  253 (395)
T d1xi9a_         174 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVD  253 (395)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEEC
T ss_pred             CCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchhcccchhhcEeeEecC
Confidence            999999999999999999886    999999999999886542  233445678999999999999999999999875  


Q ss_pred             CHHHHHHHHH----hc-CCCCCcHHHHHHHHHHhcC-chhhc
Q 019868          298 PLSIIEYLWR----AK-QPYNVSVAAEVAACAALQN-PIYLE  333 (334)
Q Consensus       298 ~~~~i~~l~~----~~-~~~~~~~~~q~aa~~~L~~-~~~~~  333 (334)
                      ++..+..+.+    .. ..++++.++|.++..+|.+ .+|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~  295 (395)
T d1xi9a_         254 PENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLK  295 (395)
T ss_dssp             TTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHH
Confidence            2222222222    21 2367888999999988875 44543

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-38  Score=300.27  Aligned_cols=259  Identities=23%  Similarity=0.369  Sum_probs=219.9

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-C-cCCCCCCC-cChHHHHHHHHHhc--
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPD-PESRRLRAALAKDS--  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Yp~-~g~~~lr~~lA~~~--  142 (334)
                      ++++.++..+. ...+...++++...++++|+|+.|++++++|+.+++++.+ + ....+|++ .|.++||+++++++  
T Consensus         2 ~~r~~~~~~~~-~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   80 (375)
T d1o4sa_           2 SRRISEIPISK-TMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGE   80 (375)
T ss_dssp             CHHHHHSCCCS-SHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             chhhhhCCCCH-HHHHHHHHHHHHHCCCCeEECCCcCCCCCCCHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhh
Confidence            45666666664 4556777888877888999999999999999999999876 3 23367954 58999999999986  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc
Q 019868          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (334)
Q Consensus       143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~  216 (334)
                          .+++++|++|+|+++++..++.+++++||+|++++|+|+.|...+...|...+.++.  ++++.+|.+.++.... 
T Consensus        81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  159 (375)
T d1o4sa_          81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-  159 (375)
T ss_dssp             HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-
T ss_pred             ccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhc-
Confidence                367899999999999999999999999999999999999999999999999888773  4567889999888876 


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccc
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAG  289 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G  289 (334)
                      .++++++++|||||||.+++.+++++|++.    +++||+||+|.++.++..   .....+..+++++++||||.|+++|
T Consensus       160 ~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G  239 (375)
T d1o4sa_         160 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG  239 (375)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG
T ss_pred             cCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCc
Confidence            689999999999999999999999999875    999999999999886543   2334456899999999999999999


Q ss_pred             cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          290 LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       290 ~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||++++++.++.+.+.+..  .+.+...+..+...+++
T Consensus       240 ~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (375)
T d1o4sa_         240 WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV  280 (375)
T ss_dssp             GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred             cccccccccccchhhhhhhhccccccccccchhhhhhhccc
Confidence            9999999999999988777665  45677777777776664

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.2e-38  Score=293.35  Aligned_cols=233  Identities=33%  Similarity=0.496  Sum_probs=200.3

Q ss_pred             hCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC--CCCCCCcChHHHHHHHHHhcC---CCCCCEEEeCCHHHHHHHHH
Q 019868           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIM  163 (334)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Yp~~g~~~lr~~lA~~~~---~~~~~I~~t~G~~~~i~~~~  163 (334)
                      ++..++|+|+|++||||+++|+.+.+++.+ +..  .++||+.|.++||+++|++++   +++++|++|+|++++|.+++
T Consensus        14 ~~~~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~~g~~~Lr~aia~~~~~~~v~~d~I~it~G~~~~l~~l~   93 (334)
T d2f8ja1          14 YETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMM   93 (334)
T ss_dssp             CCCCCCCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEEEHHHHHHHHHH
T ss_pred             ccccCCCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCCCCcHHHHHHHHHHhcccCCCcceEEecCcchhHHHHHh
Confidence            344668899999999999999999888765 432  256788899999999999984   68899999999999998876


Q ss_pred             HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +    +||+|++++|+|..|...++.+|++++.+|.++++..+     +.. ..++++++++|||||||.+++.+++.++
T Consensus        94 ~----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~-----~~~-~~~~~~l~l~nP~NPtG~~~s~~~l~~~  163 (334)
T d2f8ja1          94 L----MFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIP-----EVN-VGEGDVVFIPNPNNPTGHVFEREEIERI  163 (334)
T ss_dssp             H----HSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCC-----CCC-CCTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             h----hccccccccccccccccchhccCCcccccccccccccc-----ccc-cccceEEEecccccccceeecHHHhhcc
Confidence            6    46999999999999999999999999999976554443     122 2578999999999999999999999999


Q ss_pred             HhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 019868          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (334)
Q Consensus       244 ~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~  323 (334)
                      .+.++++|+||+|.++..... .......+++++++||||.|+++|+|+||+++++++++++.+.+..++++.++|.++.
T Consensus       164 ~~~~~~ii~Dd~~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~~~~~~~~s~~~~~~a~  242 (334)
T d2f8ja1         164 LKTGAFVALDEAYYEFHGESY-VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAK  242 (334)
T ss_dssp             HTTTCEEEEECTTGGGTCCCC-GGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHHHSCTTCSCHHHHHHHH
T ss_pred             ccceeEEeecccchhhccccc-ccccccCceEEEEecCccccchhhhhhhhcccchHHHHHHHHhhcccccchhhhhhcc
Confidence            888999999999988765432 3334467899999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCchhhc
Q 019868          324 AALQNPIYLE  333 (334)
Q Consensus       324 ~~L~~~~~~~  333 (334)
                      +++++.++++
T Consensus       243 ~~l~~~~~~~  252 (334)
T d2f8ja1         243 VALDHREIFE  252 (334)
T ss_dssp             HHHHTHHHHH
T ss_pred             cccccccchh
Confidence            9999877654

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=3e-38  Score=302.13  Aligned_cols=252  Identities=21%  Similarity=0.300  Sum_probs=206.6

Q ss_pred             HhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc----CCCCC-CCcChHHHHHHHHHhc-
Q 019868           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK----FPYIY-PDPESRRLRAALAKDS-  142 (334)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~----~~~~Y-p~~g~~~lr~~lA~~~-  142 (334)
                      +++.+.++. ...+..++.+.     ++|+|+.|++++++|+.+++++.+ +.    ..++| |..|.++||++||+++ 
T Consensus         7 ~~~~~~~~~-~~~~~~~~~~~-----~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~   80 (418)
T d2r5ea1           7 RYQGSTKSV-WVEYIQLAAQY-----KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS   80 (418)
T ss_dssp             GGTTCCCCH-HHHHHHHHHHH-----CCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhcCCCCCH-HHHHHHHhcCC-----CCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHH
Confidence            445455542 22333344443     469999999999999999988865 22    12578 4568999999999986 


Q ss_pred             ---C--CCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC----------CCCCC
Q 019868          143 ---G--LES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLN  206 (334)
Q Consensus       143 ---~--~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~----------~~~~d  206 (334)
                         |  +++ ++|++|+|+++++..++++++++||.|++++|+|+.|...+...|++++.++.+.          .+.++
T Consensus        81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~  160 (418)
T d2r5ea1          81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLD  160 (418)
T ss_dssp             HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECC
T ss_pred             HHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhh
Confidence               3  454 7999999999999999999999999999999999999999999999999988422          25678


Q ss_pred             HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEE
Q 019868          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVL  278 (334)
Q Consensus       207 ~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i  278 (334)
                      .+++.+... .+++++++++||||||.+++.+++++|++.    +++||+||+|.++.+++.    .....+..++++++
T Consensus       161 ~~~~~~~~~-~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~  239 (418)
T d2r5ea1         161 NNELEALFN-EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI  239 (418)
T ss_dssp             HHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEE
T ss_pred             HHHHhhhhh-ccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeee
Confidence            899888876 789999999999999999999999999876    999999999999986542    22233456899999


Q ss_pred             cCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|+||.|+++|+|+||+++++++++.+.+....  ++++.+.|.++...+.+
T Consensus       240 ~S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~  291 (418)
T d2r5ea1         240 GSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFET  291 (418)
T ss_dssp             EEHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHH
T ss_pred             ecCCccccCCCcccccccccchhhhhhhhcccccccccccchhhhccccccc
Confidence            999999999999999999999999999887764  67888999888776643

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.9e-38  Score=298.99  Aligned_cols=260  Identities=19%  Similarity=0.278  Sum_probs=212.8

Q ss_pred             HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCC-cChHHHHHHHHHhc---
Q 019868           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS---  142 (334)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~-~g~~~lr~~lA~~~---  142 (334)
                      ++++...+++ ++..+..++......+.++|+|+.|+|++++|+.+++++.+. ....+||+ .|.++||+++|+++   
T Consensus         2 ~~r~~~~~~~-~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~   80 (389)
T d2gb3a1           2 SDRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRR   80 (389)
T ss_dssp             CHHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred             ChhhhcCCCC-HHHHHHHHHHHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHHHHHh
Confidence            4567777887 476666666666566788999999999999999999999874 45578965 58999999999987   


Q ss_pred             -C--CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCC
Q 019868          143 -G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREK  218 (334)
Q Consensus       143 -~--~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~  218 (334)
                       |  +++++|++|+|+++++..++.+++++||.|++++|+|+.|...+...|+.++.++.+. ++..+.+.+...+. ++
T Consensus        81 ~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~  159 (389)
T d2gb3a1          81 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFIN-ER  159 (389)
T ss_dssp             SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCC-TT
T ss_pred             cCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhcc-cC
Confidence             3  5789999999999999999999999999999999999999999999999999988543 33444455555554 68


Q ss_pred             ceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-hhhcCCCcEEEEcCCchhhcccccchh
Q 019868          219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (334)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G  293 (334)
                      +++++++|||||||.+++.+++++|++.    +++||+||+|.++.+++... ......++++++.|+||.|+++|+|+|
T Consensus       160 ~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG  239 (389)
T d2gb3a1         160 TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVG  239 (389)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCE
T ss_pred             ccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCccccee
Confidence            9999999999999999999999999875    89999999999998765332 233456899999999999999999999


Q ss_pred             eeEcCHH-HHHHHHHhcC-CCCCcHHHHHHHHHHhcCc
Q 019868          294 YGAFPLS-IIEYLWRAKQ-PYNVSVAAEVAACAALQNP  329 (334)
Q Consensus       294 ~l~~~~~-~i~~l~~~~~-~~~~~~~~q~aa~~~L~~~  329 (334)
                      |++++++ +.+.+..... .++.+.+.|.++..++.+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  277 (389)
T d2gb3a1         240 CLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD  277 (389)
T ss_dssp             EEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC
T ss_pred             eeeccchhHHHHHhhhhhcccccccccccccccccccc
Confidence            9999664 4444433333 4678888999888888753

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=8.2e-38  Score=296.81  Aligned_cols=229  Identities=17%  Similarity=0.279  Sum_probs=192.8

Q ss_pred             CcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHhc------CCCCCCEEEe
Q 019868           81 LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDS------GLESDHILVG  152 (334)
Q Consensus        81 ~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~~------~~~~~~I~~t  152 (334)
                      .+++.+..+....+.++|+|++|+++|++|+.+++++.+ ++ ..++|++ |.++||+++|+++      .+++++|++|
T Consensus        17 ~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~-g~~~Lr~aia~~~~~~~g~~~~~~~I~vt   95 (394)
T d1c7na_          17 LKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTG-PTEEYKKTVKKWMKDRHQWDIQTDWIINT   95 (394)
T ss_dssp             HHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred             HHHHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCcCCCC-CCHHHHHHHHHHHHHhcCCCCCCcceEee
Confidence            356667777777788999999999999999999999876 33 2367865 5789999999986      3678999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      +|+++++..+++++++|||+|++++|.|.+|...+...|++.+.++.   +..+.+|.+.++..+..++++++++|+|||
T Consensus        96 ~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~N  175 (394)
T d1c7na_          96 AGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHN  175 (394)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBT
T ss_pred             ccchhhhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccc
Confidence            99999999999999999999999999999999999999999998873   344668999998888667899999999999


Q ss_pred             ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhh--hcCCCcEEEEcCCchhhcccccchheeEcCH-
Q 019868          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-  299 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-  299 (334)
                      |||.+++.+++++|++.    +++||+||+|.++.+++..   ...  ....+++++++|+||.|+++|+|+||+++++ 
T Consensus       176 PTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~  255 (394)
T d1c7na_         176 PVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP  255 (394)
T ss_dssp             TTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH
T ss_pred             ccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccCh
Confidence            99999999999999875    9999999999999865321   111  1235789999999999999999999999865 


Q ss_pred             HHHHHHHHhcC
Q 019868          300 SIIEYLWRAKQ  310 (334)
Q Consensus       300 ~~i~~l~~~~~  310 (334)
                      .+.+.+.+...
T Consensus       256 ~i~~~~~~~~~  266 (394)
T d1c7na_         256 DIRERFTKSRD  266 (394)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhhhhhhhh
Confidence            56566665544

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-37  Score=292.59  Aligned_cols=253  Identities=24%  Similarity=0.360  Sum_probs=212.7

Q ss_pred             HhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-cChHHHHHHHHHhcCCCCC
Q 019868           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDSGLESD  147 (334)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-~g~~~lr~~lA~~~~~~~~  147 (334)
                      +...++++ ....+..++.+.|     +|||+.|.+++++|+.+++++++ +...++|++ .|..+||++||++++++++
T Consensus         6 ~~~~~~~~-~~~~~~~la~~~~-----~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~   79 (368)
T d1v2da_           6 RTEAAKES-IFPRMSGLAQRLG-----AVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPE   79 (368)
T ss_dssp             GGGGC----CHHHHHHHHHHHT-----CEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGG
T ss_pred             hhhhcCCC-HHHHHHHHhccCC-----CEEecCCCCCCCCCHHHHHHHHHHhhcccCCCCCcCCHHHHHHHHhhcccCCc
Confidence            33444443 2333455666654     59999999999999999999987 555578955 5899999999999999999


Q ss_pred             CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEE
Q 019868          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFL  224 (334)
Q Consensus       148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l  224 (334)
                      +|++|+|+++++..++..++++||.|++++|+|+.+...+...|.+++.++.   .+++.+|++.++++++ ++++++++
T Consensus        80 ~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~  158 (368)
T d1v2da_          80 SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLL  158 (368)
T ss_dssp             GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEE
T ss_pred             ceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhc-cCceEEEE
Confidence            9999999999999999999999999999999999999999999999988874   3557899999999997 68899999


Q ss_pred             eCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868          225 TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      ++||||||.+++.+++++|+++    ++++|+||+|..+.... .........++.+++.|+||.++++|+|+||+++++
T Consensus       159 ~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~  238 (368)
T d1v2da_         159 NTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPK  238 (368)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCT
T ss_pred             cCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccccccccccc
Confidence            9999999999999999998764    99999999998876543 233334456789999999999999999999999999


Q ss_pred             HHHHHHHHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          300 SIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       300 ~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      ++++.+.+.+..  .+++.+.|.++..++...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  270 (368)
T d1v2da_         239 EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLA  270 (368)
T ss_dssp             TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhhccccccccccccccccccccc
Confidence            999988877664  678899998888887643

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-37  Score=295.91  Aligned_cols=236  Identities=21%  Similarity=0.296  Sum_probs=202.0

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-CcC---CCCCC-CcChHHHHHHHHHhc----CC--CC-CCEEEeCCHHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYP-DPESRRLRAALAKDS----GL--ES-DHILVGCGADELIDL  161 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~Yp-~~g~~~lr~~lA~~~----~~--~~-~~I~~t~G~~~~i~~  161 (334)
                      +.++|+|++|++++++|+.+++++++ +..   .++|+ ..|.++||+++|+++    |.  ++ ++|++|+|+++++..
T Consensus        24 ~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~al~~  103 (418)
T d1w7la_          24 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFT  103 (418)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHH
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHHHHHH
Confidence            35799999999999999999999876 432   25795 568999999999986    54  33 589999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC------------CCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK------------SDFSLNVELIADAVEREKPKCIFLTSPNN  229 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~------------~~~~~d~~~l~~~l~~~~~~~i~l~~p~N  229 (334)
                      ++++++++||.|++++|+|+.|...+...|++++.++..            +++.+|.+++..... ++++++++++|||
T Consensus       104 ~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~i~~~~p~N  182 (418)
T d1w7la_         104 AFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNN  182 (418)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCC-TTEEEEEEESSCT
T ss_pred             HHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhcccc-ccccceeccCcCC
Confidence            999999999999999999999999999999999888732            346788888888776 6889999999999


Q ss_pred             ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      |||.+++.+++++|++.    ++++|+||+|.++.+++.    ........+++++++|+||.|+++|+|+||+++++++
T Consensus       183 PtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~~~  262 (418)
T d1w7la_         183 PLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI  262 (418)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCHHH
T ss_pred             cccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccccccchhh
Confidence            99999999999999885    999999999999986542    1222234579999999999999999999999999999


Q ss_pred             HHHHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          302 IEYLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       302 i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                      ++.+.+.+..  ++++.++|.++..+|.+..
T Consensus       263 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~  293 (418)
T d1w7la_         263 MKHLRTVHQNSVFHCPTQSQAAVAESFEREQ  293 (418)
T ss_dssp             HHHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             hhhhccccccccccccchhhHHHHHHhhhcc
Confidence            9999887754  6789999999999987643

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=3.9e-36  Score=286.61  Aligned_cols=233  Identities=20%  Similarity=0.258  Sum_probs=187.9

Q ss_pred             CCCCeeecCCCCCCCCC----CHHHHHHHhc-C--cCCCCC-CCcChHHHHHHHHHhc------------CCCCCCEEEe
Q 019868           93 KPEDIVKIDANENPYGP----PPEVREALGQ-L--KFPYIY-PDPESRRLRAALAKDS------------GLESDHILVG  152 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~----~~~v~~al~~-~--~~~~~Y-p~~g~~~lr~~lA~~~------------~~~~~~I~~t  152 (334)
                      .+.++|+|++|+|++++    ++.+++++.+ +  ...++| |..|.++||+++|+++            ++++++|++|
T Consensus        28 ~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it  107 (412)
T d1bw0a_          28 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLC  107 (412)
T ss_dssp             SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEE
T ss_pred             CCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEe
Confidence            34679999999987654    4667777764 2  234679 4568999999999986            3678999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      +|+++++..++++++++||+|++++|+|+.|...++..|++++.++.  +++|.+|++++++... .+++++++++||||
T Consensus       108 ~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~np~NP  186 (412)
T d1bw0a_         108 SGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNP  186 (412)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTT
T ss_pred             cccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhh-cccccccccccccc
Confidence            99999999999999999999999999999999999999999999984  3568899999999886 68999999999999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-------hhhcCCCcEEEEcCCchhhcccccchheeEcC-
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-------EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-  298 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-------~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-  298 (334)
                      ||.+++.+++++|++.    +++||+||+|.++.+++...       .......++++++||||.|+++|+|+||++++ 
T Consensus       187 tG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~  266 (412)
T d1bw0a_         187 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVD  266 (412)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEEC
T ss_pred             ccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccc
Confidence            9999999999999986    89999999999998754211       11234567899999999999999999999985 


Q ss_pred             -----HHHHHHHHHhcCC-CCCcHHHHHHHHHHh
Q 019868          299 -----LSIIEYLWRAKQP-YNVSVAAEVAACAAL  326 (334)
Q Consensus       299 -----~~~i~~l~~~~~~-~~~~~~~q~aa~~~L  326 (334)
                           ...+....+.... .+++...|.++...+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (412)
T d1bw0a_         267 PHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEAL  300 (412)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred             hhhcchhhhhhhccccccccCCchhhhhhccccc
Confidence                 3444444443332 345555555554444

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-36  Score=283.14  Aligned_cols=237  Identities=21%  Similarity=0.409  Sum_probs=202.2

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-C-cCCCCC-CCcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~  164 (334)
                      .++|+|+.|.+++++|+.+++++.+ + +..++| |..|.++||+++|+++    |  ++++ +|++|+|+++++.++++
T Consensus        26 ~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~  105 (382)
T d1u08a_          26 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  105 (382)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCCEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHHHHHHHh
Confidence            3679999999999999999998875 3 234678 5669999999999986    4  3455 59999999999999999


Q ss_pred             HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++++||.|++++|+|..+...+...|+.++.++. ++++.+|++++++.+. ++++++++++||||||.+++.+++++|
T Consensus       106 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~P~NPtG~v~~~~~~~~l  184 (382)
T d1u08a_         106 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  184 (382)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             hcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhc-cCccEEEECCCCcccccccccccchhh
Confidence            99999999999999999999999999998888774 4567889999999887 689999999999999999999999998


Q ss_pred             HhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~  313 (334)
                      ++.    +++++.||.|..+.+.+.    ........++++++.|+||.|+++|+|+||+++++++++.+.+.+.  .++
T Consensus       185 ~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~~~~~~~~~  264 (382)
T d1u08a_         185 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  264 (382)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             hhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhHHHHHhhhcccccc
Confidence            875    889999999988775432    1122234678999999999999999999999999999998877765  378


Q ss_pred             CcHHHHHHHHHHhcC-chhh
Q 019868          314 VSVAAEVAACAALQN-PIYL  332 (334)
Q Consensus       314 ~~~~~q~aa~~~L~~-~~~~  332 (334)
                      ++.+.|.++..+|++ .+|+
T Consensus       265 ~~~~~q~a~~~~l~~~~~~~  284 (382)
T d1u08a_         265 VNTPAQLALADMLRAEPEHY  284 (382)
T ss_dssp             CCHHHHHHHHHHHHHCTHHH
T ss_pred             cccccccccccccccchHHH
Confidence            999999999999975 3443

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-35  Score=277.71  Aligned_cols=232  Identities=20%  Similarity=0.228  Sum_probs=187.3

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcC-CCCCCCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhcC
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLD  168 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Yp~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~~  168 (334)
                      +|+|++|+++|++|+.+.+++.+ +.. .++|+..+..++|+++++++    |  +++++|++|+|+++++..++.++++
T Consensus         1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~   80 (361)
T d1d2fa_           1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE   80 (361)
T ss_dssp             CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred             CcCcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhccc
Confidence            58999999999999999999886 332 35786553367999999876    4  5789999999999999999999999


Q ss_pred             CCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (334)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~  245 (334)
                      +||+|++++|+|+.|...++..|.+++.++.   ++++.+|++.+++.+.+.+++++++++||||||.+++.+++++|++
T Consensus        81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~  160 (361)
T d1d2fa_          81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD  160 (361)
T ss_dssp             TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred             cccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhhhhhhh
Confidence            9999999999999999999999999998873   3556799999999998788999999999999999999998888876


Q ss_pred             C----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHH-HHHhcCC---CCC
Q 019868          246 M----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEY-LWRAKQP---YNV  314 (334)
Q Consensus       246 ~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~-l~~~~~~---~~~  314 (334)
                      .    ++++|+||+|.++.+++...  ......++++++.|+||.|+++|+|+||++++ +...+. +......   .++
T Consensus       161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (361)
T d1d2fa_         161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP  240 (361)
T ss_dssp             HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred             hhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhhhcccccccccc
Confidence            4    99999999999988643221  12224678999999999999999999999764 333332 3333333   345


Q ss_pred             cHHHHHHHHHHhcC
Q 019868          315 SVAAEVAACAALQN  328 (334)
Q Consensus       315 ~~~~q~aa~~~L~~  328 (334)
                      +..++.++..+++.
T Consensus       241 ~~~~~~a~~~~~~~  254 (361)
T d1d2fa_         241 SVLALTAHIAAYQQ  254 (361)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhhc
Confidence            56666665555543

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=1.6e-34  Score=277.05  Aligned_cols=239  Identities=22%  Similarity=0.329  Sum_probs=192.5

Q ss_pred             CCCCeeecCCCCCCCCCCHHHHHHHhcC-------------cCCCCCCCc-ChHHHHHHHHHhc--------CCCCCCEE
Q 019868           93 KPEDIVKIDANENPYGPPPEVREALGQL-------------KFPYIYPDP-ESRRLRAALAKDS--------GLESDHIL  150 (334)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-------------~~~~~Yp~~-g~~~lr~~lA~~~--------~~~~~~I~  150 (334)
                      .+..+|+|+++||.+.. +.+.+.+.+.             .....|++. |.++||++||+++        .+++++|+
T Consensus        34 np~G~i~l~~aen~l~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e~Iv  112 (428)
T d1iaya_          34 NPNGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVV  112 (428)
T ss_dssp             STTSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCE
T ss_pred             CCCceEEeecccCccch-HHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChhhEE
Confidence            35669999999997632 4454544331             111458654 8999999999986        25789999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEeeC--CCCCCCCHHHHHHhcc-----cCCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPR--KSDFSLNVELIADAVE-----REKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~~--~~~~~~d~~~l~~~l~-----~~~~~~i  222 (334)
                      +|+|+++++..++.+++++||+|++++|+|+.|...+.. .|++++.++.  .++|.+|++.++.+++     ..+++++
T Consensus       113 it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  192 (428)
T d1iaya_         113 MAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGL  192 (428)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEE
Confidence            999999999999999999999999999999999887764 5899999984  3568899988876542     2568899


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc----hhh-------hcCCCcEEEEcCCchhhcc
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEW-------VKKHDNLIVLRTFSKRAGL  287 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~----~~~-------~~~~~~~i~i~S~SK~~gl  287 (334)
                      +++|||||||.+++.+++++|++.    +++||+||+|.++.+++..    ...       ....+++++++||||.|++
T Consensus       193 ~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~  272 (428)
T d1iaya_         193 ILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGL  272 (428)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSC
T ss_pred             EEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccC
Confidence            999999999999999998888764    8999999999998865321    111       1246789999999999999


Q ss_pred             cccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       288 ~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      +|+|+||+++ ++.+++.+........++...|.++.+.+.+.++.
T Consensus       273 ~GlRiG~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~  318 (428)
T d1iaya_         273 PGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFV  318 (428)
T ss_dssp             GGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHH
T ss_pred             CCcccccccccccchhhhhhhhhcccccccccccchhhhhhhhccc
Confidence            9999999998 56777878777777788999999988888876553

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.3e-34  Score=275.31  Aligned_cols=253  Identities=16%  Similarity=0.139  Sum_probs=196.9

Q ss_pred             CCCcHHHHHHHhCCCC-CCeeecCCCC---CCC--CCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhcC-----
Q 019868           79 PILPFEVLSIQLGRKP-EDIVKIDANE---NPY--GPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG-----  143 (334)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~i~l~~~~---~~~--~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~~-----  143 (334)
                      |.+++..+..++..++ .++|+|++|.   ++.  +..+.|++++..+   ...++| |..|.++||+++++++.     
T Consensus        11 p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~   90 (401)
T d7aata_          11 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE   90 (401)
T ss_dssp             CCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred             CCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCc
Confidence            3445555655544433 4579999993   222  3447888887653   233579 66799999999999871     


Q ss_pred             -CCCCCEEEeCC-----HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcc
Q 019868          144 -LESDHILVGCG-----ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVE  215 (334)
Q Consensus       144 -~~~~~I~~t~G-----~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~  215 (334)
                       +++++|+.+.|     +.+++..+++.+++|||+|++++|+|+.|...++..|++++.+|.  ++++.+|++.+++.+.
T Consensus        91 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (401)
T d7aata_          91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDIS  170 (401)
T ss_dssp             HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred             ccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHh
Confidence             25667766543     346788888889999999999999999999999999999999984  4567889998887764


Q ss_pred             --cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch------hhhcCCCcEEEEcCCch
Q 019868          216 --REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM------EWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~------~~~~~~~~~i~i~S~SK  283 (334)
                        .++++++++++||||||.+++.+++++|++.    +++||+||+|.++.+++...      ......++++++.|+||
T Consensus       171 ~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk  250 (401)
T d7aata_         171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK  250 (401)
T ss_dssp             TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred             cCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccc
Confidence              2578899999999999999999999999886    99999999999999865221      12234678899999999


Q ss_pred             hhcccccchheeEcCHHHHHHHHHhcC---------CCCCcHHHHHHHHHHhcCchh
Q 019868          284 RAGLAGLRVGYGAFPLSIIEYLWRAKQ---------PYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       284 ~~gl~G~R~G~l~~~~~~i~~l~~~~~---------~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      .++++|||+||++++.++++.+.+...         ..+.+.+.|.++..+++++.+
T Consensus       251 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  307 (401)
T d7aata_         251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPEL  307 (401)
T ss_dssp             TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHH
T ss_pred             cceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHH
Confidence            999999999999998776665544322         257889999999999988754

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=2.5e-34  Score=275.93  Aligned_cols=237  Identities=19%  Similarity=0.284  Sum_probs=188.6

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhcC--------------cCCCCCCCc-ChHHHHHHHHHhc--------CCCCCCEE
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQL--------------KFPYIYPDP-ESRRLRAALAKDS--------GLESDHIL  150 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~--------------~~~~~Yp~~-g~~~lr~~lA~~~--------~~~~~~I~  150 (334)
                      |..+|+|+++||.+. .+.+.+.+..-              .....|++. |.++||+++|+++        .+++++|+
T Consensus        35 p~G~i~l~~~en~l~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~  113 (431)
T d1m7ya_          35 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV  113 (431)
T ss_dssp             TTSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred             CCcEEEeeccccccc-HHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcceEE
Confidence            455899999999874 24444444320              011358665 8999999999986        25789999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEE
Q 019868          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCI  222 (334)
Q Consensus       151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i  222 (334)
                      +|+|+++++..++.++++|||+|++++|+|+.+...+.. .|+++++++.+  ++|.+|++.+++.+.+     .+++++
T Consensus       114 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  193 (431)
T d1m7ya_         114 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV  193 (431)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEE
Confidence            999999999999999999999999999999998887764 68999998843  4688999998877642     467899


Q ss_pred             EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc-h---hhh---------cCCCcEEEEcCCchhh
Q 019868          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR-M---EWV---------KKHDNLIVLRTFSKRA  285 (334)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~-~---~~~---------~~~~~~i~i~S~SK~~  285 (334)
                      +++|||||||.+++.+++++|++.    +++||+||+|.++.+++.. .   ...         ...+++++++||||.|
T Consensus       194 ~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~  273 (431)
T d1m7ya_         194 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  273 (431)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSS
T ss_pred             EecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccc
Confidence            999999999999999999999885    8999999999998865421 1   111         1246899999999999


Q ss_pred             cccccchheeEcCHHHHHH-HHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868          286 GLAGLRVGYGAFPLSIIEY-LWRAKQPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       286 gl~G~R~G~l~~~~~~i~~-l~~~~~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      |++|+|+||++++++++.. +.+......++...|.++.+.+.+.++
T Consensus       274 ~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~  320 (431)
T d1m7ya_         274 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKL  320 (431)
T ss_dssp             CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHH
T ss_pred             cCCCCccceeccchhhhHHHHHHHhccccccccccchhhhhhccchh
Confidence            9999999999998876654 444445567888888888888877543

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-34  Score=272.85  Aligned_cols=260  Identities=17%  Similarity=0.120  Sum_probs=194.8

Q ss_pred             hhhhCCCCCCCcHHHHHHHhCCC-CCCeeecCCCC---CCC--CCCHHHHHHHhcC----cCCCCC-CCcChHHHHHHHH
Q 019868           71 LRKLKPYQPILPFEVLSIQLGRK-PEDIVKIDANE---NPY--GPPPEVREALGQL----KFPYIY-PDPESRRLRAALA  139 (334)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---~~~--~~~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA  139 (334)
                      +.+++++ +.+++..+..++..+ ..+.|+|++|.   ++.  +.++.|++|...+    ...+.| |..|.++||+++|
T Consensus         2 ~~~~~~~-~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia   80 (397)
T d3tata_           2 FQKVDAY-AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA   80 (397)
T ss_dssp             CCCCCCC-CCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred             cccCCCC-CCCcHHHHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHH
Confidence            3456666 344544455444332 24569999993   332  3457888886643    223568 6779999999999


Q ss_pred             HhcC------CCCCCEEEeCCHHHH----HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCH
Q 019868          140 KDSG------LESDHILVGCGADEL----IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNV  207 (334)
Q Consensus       140 ~~~~------~~~~~I~~t~G~~~~----i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~  207 (334)
                      +++.      +++++|+++.|++++    +.+++..+++|||+|++++|+|+.|...++..|++++.+|.  +.++..|.
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~  160 (397)
T d3tata_          81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF  160 (397)
T ss_dssp             HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred             HHHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccch
Confidence            9872      357788887766654    55666667899999999999999999999999999999995  34567788


Q ss_pred             HHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-----hhhcCCCcEE
Q 019868          208 ELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-----EWVKKHDNLI  276 (334)
Q Consensus       208 ~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-----~~~~~~~~~i  276 (334)
                      +.+.+.+..  ++++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++...     ......++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i  240 (397)
T d3tata_         161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL  240 (397)
T ss_dssp             HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred             HHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceE
Confidence            888776542  467788889999999999999999999885    99999999999998763211     1223567899


Q ss_pred             EEcCCchhhcccccchheeEcCHHHHHHHHH-------hcC--CCCCcHHHHHHHHHHhcCchh
Q 019868          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-------AKQ--PYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       277 ~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~-------~~~--~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      ++.||||.|+++|||+||++++...++...+       ...  ..+++...|.++..++.++++
T Consensus       241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~  304 (397)
T d3tata_         241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEAL  304 (397)
T ss_dssp             ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHH
T ss_pred             EEecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHH
Confidence            9999999999999999999986544433222       222  256788999999998888654

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=3.3e-33  Score=265.17  Aligned_cols=260  Identities=22%  Similarity=0.290  Sum_probs=197.6

Q ss_pred             CCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCC--CCHHHHHHHhcC-----cCCCCCC-CcChHH
Q 019868           62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYG--PPPEVREALGQL-----KFPYIYP-DPESRR  133 (334)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~--~~~~v~~al~~~-----~~~~~Yp-~~g~~~  133 (334)
                      +..++++++...++++.    +.++......  +++|+|+.|.|+..  |.+.+.+++.++     .....|+ ..|.++
T Consensus         2 ~~~~~~~~~~~~~~~s~----ire~~~~~~~--~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   75 (403)
T d1wsta1           2 NFDSFFSEKAMLMKASE----VRELLKLVET--SDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP   75 (403)
T ss_dssp             CGGGGCCHHHHHCCCHH----HHHHHHHHTS--SSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHH
T ss_pred             CHHHHHHHHHhcCCCcH----HHHHHHHhCC--CCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHH
Confidence            34566677777776552    3333332222  46899999987543  334566665542     1225685 458999


Q ss_pred             HHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCH
Q 019868          134 LRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (334)
Q Consensus       134 lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~  207 (334)
                      ||+++|+++      .+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...|++++.++.+++ ..+.
T Consensus        76 lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~  154 (403)
T d1wsta1          76 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDK-GMRV  154 (403)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECH
T ss_pred             HHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeeccc-CCcc
Confidence            999999996      378999999999999999999999999999999999999999999999999999985432 2222


Q ss_pred             HHHH----Hhcc--cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCc
Q 019868          208 ELIA----DAVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDN  274 (334)
Q Consensus       208 ~~l~----~~l~--~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~  274 (334)
                      ..+.    ....  +....++++++||||||.+++.+++++|++.    +++||+||+|.++.+++.   .....+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~  234 (403)
T d1wsta1         155 DLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGR  234 (403)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSC
T ss_pred             ccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCc
Confidence            2222    1111  1345577778999999999999999999875    999999999999986542   2334456789


Q ss_pred             EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCc
Q 019868          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (334)
Q Consensus       275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~  329 (334)
                      +++++||||.++ +|+|+||+++++++++.+.+....  .+.+...|.+..+++...
T Consensus       235 ~i~~~S~SK~~~-~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (403)
T d1wsta1         235 VIYLGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENG  290 (403)
T ss_dssp             EEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTT
T ss_pred             EEEEccccceec-CcccccccccchHHHHHHHHHHhhhccccccchhhhHHhhhhcc
Confidence            999999999986 999999999999999988776554  577888888877776654

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-33  Score=268.58  Aligned_cols=235  Identities=20%  Similarity=0.248  Sum_probs=189.6

Q ss_pred             CCCeeecCCCCCCCC--CCHHHHHHHhcC-----cCCCCCC-CcChHHHHHHHHHhc-------CCCCCCEEEeCCHHHH
Q 019868           94 PEDIVKIDANENPYG--PPPEVREALGQL-----KFPYIYP-DPESRRLRAALAKDS-------GLESDHILVGCGADEL  158 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~--~~~~v~~al~~~-----~~~~~Yp-~~g~~~lr~~lA~~~-------~~~~~~I~~t~G~~~~  158 (334)
                      ++++|+|+.|.|+..  |.+.+.++++++     ....+|+ ..|.++||++||+++       ++++++|++|+|++++
T Consensus        37 ~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~a  116 (420)
T d1vp4a_          37 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQA  116 (420)
T ss_dssp             STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHH
T ss_pred             CCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCHHHeEeccchhhh
Confidence            467999999987654  334555555442     1225785 558999999999986       2578999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-------CC-ceEEEEeCCCCc
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EK-PKCIFLTSPNNP  230 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------~~-~~~i~l~~p~NP  230 (334)
                      +.+++.+++++||+|++++|+|+.|...++..|++++.++.++ .++|++.+...+..       .+ ..++++++||||
T Consensus       117 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NP  195 (420)
T d1vp4a_         117 LDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-DGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP  195 (420)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-TEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred             HHHHHHhhhccccccccccccccchhHHHHHHhhhcccccccc-cccccchhhhhhhhhHHHhhccccceeeEecCCCCc
Confidence            9999999999999999999999999999999999999999644 36788776654321       12 345556799999


Q ss_pred             cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      ||.+++.+++++|++.    ++++|+||+|.++.+++.   ........+++++++|+||.+ ++|+|+||+++++++++
T Consensus       196 tG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~-~~G~RiG~~~~~~~~i~  274 (420)
T d1vp4a_         196 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVL-APGLRIGMVAGSKEFIR  274 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTT-CGGGCEEEEECCHHHHH
T ss_pred             cchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEecccccc-ccccccccccccchhhh
Confidence            9999999999999875    999999999999987542   233345678899999999976 59999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868          304 YLWRAKQP--YNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~  330 (334)
                      ++.+....  .+.+.+.|.++..++.+..
T Consensus       275 ~l~~~~~~~~~~~~~~~q~~~a~~l~~~~  303 (420)
T d1vp4a_         275 KIVQAKQSADLCSPAITHRLAARYLERYD  303 (420)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHSC
T ss_pred             hhhhhhhhccccCchhhhhhhhhhccccc
Confidence            99887766  5678999999888887654

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=5.7e-33  Score=264.90  Aligned_cols=251  Identities=18%  Similarity=0.209  Sum_probs=187.1

Q ss_pred             cHHHHHHHhCCCC-CCeeecCCC---CCCC--CCCHHHHHHHhcC----cCCCCC-CCcChHHHHHHHHHhc-C-----C
Q 019868           82 PFEVLSIQLGRKP-EDIVKIDAN---ENPY--GPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----L  144 (334)
Q Consensus        82 ~~~~~~~~~~~~~-~~~i~l~~~---~~~~--~~~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA~~~-~-----~  144 (334)
                      ++..++.+++.++ .++|+|++|   ++..  +..+.|+++.+.+    ...++| |..|.++||+++++++ +     +
T Consensus        15 ~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~   94 (412)
T d1yaaa_          15 ALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL   94 (412)
T ss_dssp             TTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred             hHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHHhcccCccc
Confidence            4455667666654 447999999   3333  2347888776542    234679 6679999999999986 2     1


Q ss_pred             CCCCEEE--eCCHHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--
Q 019868          145 ESDHILV--GCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--  216 (334)
Q Consensus       145 ~~~~I~~--t~G~~~~i~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--  216 (334)
                      ..+.++.  +.|+..++..++  ..++++||.|++++|+|+.|...++..|++++.++.  ++++.+|.+.+++.+..  
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (412)
T d1yaaa_          95 QEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP  174 (412)
T ss_dssp             HTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC
T ss_pred             cccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccccccccchhhhcccccCC
Confidence            2333333  345555554443  345689999999999999999999999999999983  45677888888777642  


Q ss_pred             CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch---------hhhcCCCcEEEEcCCch
Q 019868          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM---------EWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~---------~~~~~~~~~i~i~S~SK  283 (334)
                      ++++++++++||||||.+++.+++++|++.    ++++|+||+|.+|.+++...         ......++++++.||||
T Consensus       175 ~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK  254 (412)
T d1yaaa_         175 EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAK  254 (412)
T ss_dssp             TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTT
T ss_pred             CceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCC
Confidence            456788889999999999999999999876    99999999999999765211         12245689999999999


Q ss_pred             hhcccccchheeEcCHHHHHHHH-----------H--hcCCCCCcHHHHHHHHHHhcCchhh
Q 019868          284 RAGLAGLRVGYGAFPLSIIEYLW-----------R--AKQPYNVSVAAEVAACAALQNPIYL  332 (334)
Q Consensus       284 ~~gl~G~R~G~l~~~~~~i~~l~-----------~--~~~~~~~~~~~q~aa~~~L~~~~~~  332 (334)
                      .|+++|||+||+++++++++.+.           .  .....+++.++|.++..+++++.+.
T Consensus       255 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  316 (412)
T d1yaaa_         255 NAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELT  316 (412)
T ss_dssp             TSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHH
T ss_pred             ccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHH
Confidence            99999999999998754332111           1  1234688999999999999987543

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=4.6e-33  Score=265.38  Aligned_cols=259  Identities=17%  Similarity=0.182  Sum_probs=190.2

Q ss_pred             hhhCCCCCCCcHHHHHHHhCCCC-CCeeecCCC---CCC--CCCCHHHHHHHhcC----cCCCCC-CCcChHHHHHHHHH
Q 019868           72 RKLKPYQPILPFEVLSIQLGRKP-EDIVKIDAN---ENP--YGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAK  140 (334)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~---~~~--~~~~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA~  140 (334)
                      .+++..++ ..+..++.++..++ .++|||++|   +++  .+..|.|+++.+.+    ...++| |..|.++||+++++
T Consensus         7 ~~~~~~~~-~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~   85 (412)
T d1ajsa_           7 AEVPQAQP-VLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASR   85 (412)
T ss_dssp             TTCCCCCC-CHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             hhCCcCCC-ChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHH
Confidence            33544433 34555777765554 467999999   232  23447788775542    234679 77799999999999


Q ss_pred             hc-C-----CCCCCE--EEeCCHHHHHHHHHH-------HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee---CCCC
Q 019868          141 DS-G-----LESDHI--LVGCGADELIDLIMR-------CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSD  202 (334)
Q Consensus       141 ~~-~-----~~~~~I--~~t~G~~~~i~~~~~-------~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~---~~~~  202 (334)
                      ++ +     +..+++  +.|.|.+.++.....       .+++|||+|++++|+|+.|...++..|++++.++   .++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~  165 (412)
T d1ajsa_          86 LALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEK  165 (412)
T ss_dssp             HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTT
T ss_pred             HHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeeccccccc
Confidence            87 1     334544  445565555544433       3469999999999999999999999999866554   3455


Q ss_pred             CCCCHHHHHHhcc--cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc------hhhhc
Q 019868          203 FSLNVELIADAVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVK  270 (334)
Q Consensus       203 ~~~d~~~l~~~l~--~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~------~~~~~  270 (334)
                      +..|++.+++.+.  .++++++++|+||||||.+++.+++++|++.    +++||+||+|.++.+++..      .....
T Consensus       166 ~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~  245 (412)
T d1ajsa_         166 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS  245 (412)
T ss_dssp             TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             ccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhh
Confidence            6788888777643  2578899999999999999999999999886    9999999999999876521      12234


Q ss_pred             CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHhcCchh
Q 019868          271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       271 ~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~---------~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      ..++++++.|+||.++++|+|+||++++...++.+.+..         ...+++.+.|.++..++.++.+
T Consensus       246 ~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (412)
T d1ajsa_         246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPEL  315 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHH
T ss_pred             hcccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHH
Confidence            568899999999999999999999999755444333221         2356788999999999887643

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2e-31  Score=252.52  Aligned_cols=236  Identities=15%  Similarity=0.131  Sum_probs=179.5

Q ss_pred             CCeeecCCC---CCC--CCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc----C--CCCCC--EEEeCCHHH
Q 019868           95 EDIVKIDAN---ENP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESDH--ILVGCGADE  157 (334)
Q Consensus        95 ~~~i~l~~~---~~~--~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~~--I~~t~G~~~  157 (334)
                      .++|+|++|   ++.  .+.++.|++++.++   ...++| |..|.++||+++++++    +  +.++.  ++++.|+..
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (396)
T d2q7wa1          26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             CCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCcccccceeeeccchHHH
Confidence            347999999   232  34458888887653   234679 6679999999999986    1  22333  445777766


Q ss_pred             HHHHHHHH--hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCCcc
Q 019868          158 LIDLIMRC--VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD  231 (334)
Q Consensus       158 ~i~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPt  231 (334)
                      ++.+++..  .+++||.|++++|+|+.|...++..|++++.++.  ++++..+...+++....  .+++++++++|||||
T Consensus       106 ~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P~NPT  185 (396)
T d2q7wa1         106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT  185 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred             HHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhccCcEEEEecCCcCCc
Confidence            66655543  4689999999999999999999999999999984  34555677666665432  467889999999999


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-----hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-----EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-----~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i  302 (334)
                      |.+++.+++++|+++    +++||+||+|.++.+++...     ......++.+++.|+||.|+++|+|+||+++++..+
T Consensus       186 G~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~  265 (396)
T d2q7wa1         186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred             CeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchhHH
Confidence            999999999999886    99999999999998764211     122356889999999999999999999999977666


Q ss_pred             HHHHHhc---------CCCCCcHHHHHHHHHHhcCch
Q 019868          303 EYLWRAK---------QPYNVSVAAEVAACAALQNPI  330 (334)
Q Consensus       303 ~~l~~~~---------~~~~~~~~~q~aa~~~L~~~~  330 (334)
                      +.+.+..         ...+.+...|.++..++.++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~  302 (396)
T d2q7wa1         266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA  302 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred             HHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCch
Confidence            5444332         235788899999999888753

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.97  E-value=3.6e-31  Score=250.43  Aligned_cols=260  Identities=14%  Similarity=0.096  Sum_probs=188.9

Q ss_pred             hhhhCCCCCCCcHHHHHHHhCCCC-CCeeecCCCC---CC--CCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHH
Q 019868           71 LRKLKPYQPILPFEVLSIQLGRKP-EDIVKIDANE---NP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK  140 (334)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~---~~--~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~  140 (334)
                      +.++++.+ .+++..++.++..++ .++|+|++|.   ++  .++++.|+++++.+   ...++| |..|.++||+++++
T Consensus         2 ~~~~~~~~-~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~   80 (394)
T d2ay1a_           2 LGNLKPQA-PDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE   80 (394)
T ss_dssp             GGGCCCCC-CCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred             CCCCCCCC-CChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Confidence            44566664 345555665554433 4579999993   22  23458888887763   234679 67799999999999


Q ss_pred             hc----CC-CCCCEEEeCCHH--HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHH
Q 019868          141 DS----GL-ESDHILVGCGAD--ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIA  211 (334)
Q Consensus       141 ~~----~~-~~~~I~~t~G~~--~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~  211 (334)
                      ++    +. .....+++.|++  ..+...+..+.++||.|++++|+|+.|...++.+|++++.++.  ++++..+.+.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  160 (394)
T d2ay1a_          81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK  160 (394)
T ss_dssp             HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred             HHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHH
Confidence            86    11 122334444443  4455666667899999999999999999999999999999984  345566666666


Q ss_pred             Hhcc--cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh-----hhcCCCcEEEEcC
Q 019868          212 DAVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-----WVKKHDNLIVLRT  280 (334)
Q Consensus       212 ~~l~--~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~-----~~~~~~~~i~i~S  280 (334)
                      +...  .++++++++++||||||.+++.+++++|+++    +++||+||+|.++.+++....     ......+++++.|
T Consensus       161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s  240 (394)
T d2ay1a_         161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS  240 (394)
T ss_dssp             HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred             HHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccccccc
Confidence            5543  2456778888999999999999999999876    999999999999987643211     1224567899999


Q ss_pred             CchhhcccccchheeEcCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHhcCchh
Q 019868          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNPIY  331 (334)
Q Consensus       281 ~SK~~gl~G~R~G~l~~~~~~i~~l~~~~---------~~~~~~~~~q~aa~~~L~~~~~  331 (334)
                      +||.++++|+|+||++++...++...+..         ...+.+...|+++...+.++.+
T Consensus       241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  300 (394)
T d2ay1a_         241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPEL  300 (394)
T ss_dssp             CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHH
T ss_pred             ccccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHH
Confidence            99999999999999998765554433222         2346777888888888887644

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.95  E-value=1.7e-29  Score=240.94  Aligned_cols=217  Identities=17%  Similarity=0.172  Sum_probs=163.7

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc--C--c-CCCCC--CCcC---hHHHHHHHHHhc----C--CCCCCEEEeCCHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ--L--K-FPYIY--PDPE---SRRLRAALAKDS----G--LESDHILVGCGADEL  158 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~--~--~-~~~~Y--p~~g---~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~  158 (334)
                      +-++|++.|+|.+-.|-....+-..  +  . +...|  .+..   .++|+++|++++    +  .+..+|++++|++|+
T Consensus        56 ~~~~~~~~gdp~~~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gstel  135 (425)
T d2hoxa1          56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL  135 (425)
T ss_dssp             TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred             CceeeCCCCCCCCCCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHH
Confidence            3478999999887543222222221  1  1 11223  3222   479999999987    2  244579999999999


Q ss_pred             HHHHHHHh--------cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868          159 IDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (334)
Q Consensus       159 i~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP  230 (334)
                      |+.++.+|        ++|||+|+++.|+|+.|...++..|.+...      |.+|.+.++++++ +++++++|||||||
T Consensus       136 i~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~------~~~D~~~~~~~~~-~~~~ii~l~sPnNP  208 (425)
T d2hoxa1         136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNNP  208 (425)
T ss_dssp             HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCTT
T ss_pred             HHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc------cCCCHHHHHhhCC-CCceEEEEECCCCC
Confidence            99999998        578999999999999999999988876554      4457777777776 68999999999999


Q ss_pred             cccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868          231 DGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK  309 (334)
Q Consensus       231 tG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~  309 (334)
                      ||.+..      -+..++.+|.||+|.+..+    .......+++|+++||||.||++|||+||+++ ++.+++.+.+..
T Consensus       209 tG~l~~------~v~~~~~~I~DEaY~~~~f----~~~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~~~  278 (425)
T d2hoxa1         209 EGLLRH------AVIKGCKSIYDMVYYWPHY----TPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM  278 (425)
T ss_dssp             TCCCCC------CSSTTCEEEEECTTCSTTT----SCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH
T ss_pred             Ccchhh------hhhhCCEEEEeccccCccc----cchhhhcCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHHHhh
Confidence            998731      1112899999999965332    22234568899999999999999999999876 567778787765


Q ss_pred             CC--CCCcHHHHHHHHHHhcC
Q 019868          310 QP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       310 ~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ..  ++++.++|.++.++|++
T Consensus       279 ~~~~~~vs~~~Q~aa~~aL~~  299 (425)
T d2hoxa1         279 TKNTEGTPRETQLRSLKVLKE  299 (425)
T ss_dssp             HHHTSSCCHHHHHHHHHHHHH
T ss_pred             ccCcccCCHHHHHHHHHHhhc
Confidence            53  78999999999999875

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.89  E-value=2.4e-23  Score=194.76  Aligned_cols=218  Identities=12%  Similarity=0.026  Sum_probs=161.7

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV  174 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl  174 (334)
                      .++++......++.++...+.+...    ..|..+.+++++..+++++.+ .+++++++|+++++..++.++.++|+.|+
T Consensus        21 ~i~~~~gl~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al~~~~~vi~   96 (366)
T d2aeua1          21 ALYDLSGLSGGFLIDEKDKALLNTY----IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKPKKVIHY   96 (366)
T ss_dssp             GCEECSSCCCCCCCCHHHHHHHTST----THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCCSEEEEE
T ss_pred             hHhhhccCCCCCCccHHHHHHHHHh----cCchhhHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHhCCCCEEEE
Confidence            3678877777777777776665432    113345788999989888754 47899999999999999998764444445


Q ss_pred             Ec-CCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc-cCCcHHHHHHHHhC-CCeEE
Q 019868          175 DC-PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDEDLLKILEM-PILVV  251 (334)
Q Consensus       175 ~~-~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG-~~~~~~~l~~l~~~-~~~lI  251 (334)
                      ++ .|+|+.|...++..|++++...       |+++++++++ +++|+|++++|+||++ ...+.+++.++++. ++++|
T Consensus        97 ~~~~~~~~~~~~~~~l~g~~~v~~~-------d~e~l~~~i~-~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i  168 (366)
T d2aeua1          97 LPELPGHPSIERSCKIVNAKYFESD-------KVGEILNKID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVF  168 (366)
T ss_dssp             CSSSSCCTHHHHHHHHTTCEEEEES-------CHHHHHTTCC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEE
T ss_pred             ecCCCcchhHHHHHHhcCCeEECCC-------CHHHHHHhcC-CCceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEE
Confidence            54 5899999999999999875432       7999999997 7899999999998754 23345555555555 99999


Q ss_pred             EccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ  327 (334)
Q Consensus       252 vDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~  327 (334)
                      +||+|..+.+...........+..+++.|+||.+  +|+|+||+++++++++.+......  ++++++.|.++.++|+
T Consensus       169 ~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~--~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~~aL~  244 (366)
T d2aeua1         169 VDDASGARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALK  244 (366)
T ss_dssp             EECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred             EecCccccccccccCCCHhhcCceEEEecccccc--cccceeEEEecHHHHHHHHHHHhcccccCCHHHHHHHHHHHH
Confidence            9999986543111000111223458899999964  699999999999999999877655  5678889988888775

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.89  E-value=6.9e-23  Score=190.00  Aligned_cols=171  Identities=18%  Similarity=0.164  Sum_probs=142.4

Q ss_pred             hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHH
Q 019868          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (334)
Q Consensus       131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~  208 (334)
                      ...+++.+|+++|.  |++++|+|+++++..++.++++|||+|+++.++|......++..|++++.+|.+  .++.+|++
T Consensus        49 ~~~~~~~~A~~~g~--e~~~~t~g~t~a~~~~~~al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~  126 (364)
T d2e7ja1          49 HDFIHNQLPKFLGC--DVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPE  126 (364)
T ss_dssp             HHHHHTHHHHHTTS--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHH
T ss_pred             HHHHHHHHHHHhCc--CEEEEECcHHHHHHHHHHHHhCCCcEEEeecccccccchHHHhccceEEEeeeccccccccCHH
Confidence            35689999999996  589999999999999999999999999999999988878888999999999853  46789999


Q ss_pred             HHHHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868          209 LIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       209 ~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK  283 (334)
                      ++++.+++    .++++|++++|+||||.+.+.+++.++++. ++++++|++|+.........    ..+.++++.|++|
T Consensus       127 ~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~~~~~~~----~~g~D~~~~S~~K  202 (364)
T d2e7ja1         127 NFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLK----EIGADFIVGSGHK  202 (364)
T ss_dssp             HHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHH----HHTCSEEEEEHHH
T ss_pred             HHHhhhhhhcccCCceEEEeecCCCCCceeecchhheeccccccchhhccccchhhhhhhccc----ccccceeeecccc
Confidence            99998852    335688899999999999999999999998 99999999996433221111    2234589999999


Q ss_pred             hhcccccchheeEcCHHHHHHHHHh
Q 019868          284 RAGLAGLRVGYGAFPLSIIEYLWRA  308 (334)
Q Consensus       284 ~~gl~G~R~G~l~~~~~~i~~l~~~  308 (334)
                      .|+.+| ++||+++++++++.+.+.
T Consensus       203 ~~~~~g-~~g~l~~~~~~~~~~~~~  226 (364)
T d2e7ja1         203 SMAASG-PIGVMGMKEEWAEIVLRR  226 (364)
T ss_dssp             HSSCCS-SCEEEEECTTTTTTTTCB
T ss_pred             ccCCCC-CEEEEEECHHHHHHHHhh
Confidence            998666 799999998887765443

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2e-20  Score=175.63  Aligned_cols=198  Identities=14%  Similarity=0.108  Sum_probs=155.5

Q ss_pred             eecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCc--C-----------hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP--E-----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~--g-----------~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      |.|+.+.. -++++.+++++.+. .....|+++  +           .+++|+.+|+++|+++++|++|+|+++++..++
T Consensus         4 iYlD~aa~-~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~~~   82 (391)
T d1p3wa_           4 IYLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAI   82 (391)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHH
T ss_pred             EEeeCccc-cCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHHHH
Confidence            56665543 36779999999873 333344322  1           347899999999999999999999999999888


Q ss_pred             HHh----cCCCCEEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          164 RCV----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       164 ~~l----~~~gd~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      .++    +++||+|++.++.|+.+...   ++..|+++..++.++++.+|+++++++++ +++++|++++++||||.++|
T Consensus        83 ~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~-~~T~lv~is~~~n~tG~~~~  161 (391)
T d1p3wa_          83 KGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEIGVVQD  161 (391)
T ss_dssp             HHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTTCCBCC
T ss_pred             hhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCC-CCcEEEEEECCCCCCeeECC
Confidence            765    47999999999999876543   34579999999987778899999999997 79999999999999999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~  303 (334)
                      .+++.++++. ++++++|.+|......-    .+...+..+++.|..|.+|.+|  +|++++.++..+
T Consensus       162 ~~~I~~~~~~~~~~~ivD~~~~~g~~~~----d~~~~~~D~~~~s~~k~~g~~g--~g~~~~~~~~~~  223 (391)
T d1p3wa_         162 IAAIGEMCRARGIIYHVDATQSVGKLPI----DLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRV  223 (391)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTBTTBCC----CTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBC
T ss_pred             HHHHHHHhccCCcEEEEeeccccCCccc----cchhccccccccccccccCCCc--eEEEEEecchhc
Confidence            9999999988 99999999987543211    1112334588889999877555  688877665443

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.76  E-value=9e-18  Score=156.38  Aligned_cols=192  Identities=22%  Similarity=0.192  Sum_probs=145.6

Q ss_pred             eecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc----------ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH-
Q 019868           98 VKIDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~----------g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~-  165 (334)
                      |.|+.+.. -++|+.+.+++.+ +...+..|..          ...+.|+++|+++|+++++|++++|+++++..++.. 
T Consensus         3 iyld~a~~-~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~~   81 (376)
T d1eg5a_           3 VYFDNNAT-TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (376)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEECccc-ccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhhhcc
Confidence            55654332 2456778888765 2221111211          134678999999999999999999999999998864 


Q ss_pred             ---hcCCCCEEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868          166 ---VLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                         ...+|+.|++....|+.+...   ++..|++++.+|.+.++.+|+++++++++ +++++|++++++|+||...+.++
T Consensus        82 ~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~-~~t~lv~is~v~~~tG~~~~~~~  160 (376)
T d1eg5a_          82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (376)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             cccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcC-CCceEEEEECCccccceeeeehh
Confidence               347889999998888765543   45579999999987788999999999997 79999999999999999999999


Q ss_pred             HHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhee
Q 019868          240 LLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       240 l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      +.++++.   ++++++|.++.-...    ...+...+..+++.|++|.+|.+|.+++|+
T Consensus       161 i~~~~~~~~~~~~~~vD~~q~~g~~----~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~  215 (376)
T d1eg5a_         161 VTRIVKKKNKETLVHVDAVQTIGKI----PFSLEKLEVDYASFSAHKFHGPKGVGITYI  215 (376)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTTTTS----CCCCTTTCCSEEEEEGGGGTSCTTCEEEEE
T ss_pred             hhhhhhhcccCceeEEEeeeccccc----cccccccCccceecccceeecCCCceeEEe
Confidence            9998753   899999998864321    112234456799999999888777655553

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.76  E-value=3.3e-18  Score=159.55  Aligned_cols=202  Identities=15%  Similarity=0.088  Sum_probs=147.9

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-Cc----C-CCCCCCc-----ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LK----F-PYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~----~-~~~Yp~~-----g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~  165 (334)
                      .+.|+.+... +.|..+.+++.+ +.    . ...+...     -..++|+.+|+++++++++|++|+|+++++++++.+
T Consensus         8 ~~yld~~~~~-~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~~~~~   86 (381)
T d1elua_           8 KTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWG   86 (381)
T ss_dssp             SEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHH
T ss_pred             CEEeeCCccc-CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhhcchh
Confidence            4667655322 345567777654 21    1 1222111     145789999999999999999999999999999998


Q ss_pred             h-cCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCCCC--CCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          166 V-LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       166 l-~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~--~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      + .++||+|+++++.|+..    ...++..|++++.+|.+.+..  .+.+.+++.++ ++++++++++++||||.+.+.+
T Consensus        87 l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~-~~t~~v~i~~~~n~tG~~~~~~  165 (381)
T d1elua_          87 LDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPLA  165 (381)
T ss_dssp             SCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCHH
T ss_pred             hhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhc-ccccccccccccccccccchhh
Confidence            7 58999999999999754    345556799999998543222  23566777776 7899999999999999999999


Q ss_pred             HHHHHHhC-----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          239 DLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       239 ~l~~l~~~-----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ++.++++.     ++++++|.+++....    ...+...+..+++.|+.|.++ ...++|+++++++..+.+
T Consensus       166 ~I~~l~~~~~~~~~~~~~vD~~~~~g~~----~~~~~~~~~D~~~~s~~K~~~-~p~G~g~l~~~~~~~~~~  232 (381)
T d1elua_         166 EIMAVCRRHQGNYPVRVLVDGAQSAGSL----PLDFSRLEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEI  232 (381)
T ss_dssp             HHHHHHHHCCSSSCCEEEEECTTTBTTB----CCCTTTSCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGC
T ss_pred             HHHHHHhhcccccccccccccccccccc----ccccccccccccccccccccc-ccchhhHHHhhHHHHHhc
Confidence            99999973     689999999874322    111223355699999999876 445689999888766544

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=3e-17  Score=154.83  Aligned_cols=203  Identities=17%  Similarity=0.203  Sum_probs=157.5

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-----------cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~  161 (334)
                      ++++.|+.+... +.|+.+.+++.+ +...+..|.           ...++.|+.+|++++.. +++|++++|++++++.
T Consensus        21 ~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~~   99 (405)
T d1jf9a_          21 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL   99 (405)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CCeEEEeCcccc-CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHHH
Confidence            456888776554 567888888765 211111111           11457899999999964 5899999999999998


Q ss_pred             HHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (334)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~  233 (334)
                      ++..+    ..+||+|++.+-.|+.    +...++..|++++.+|.+.+..+|++.++++++ +++++|.+++.+|.||.
T Consensus       100 ~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~-~~t~lv~~~~v~~~tG~  178 (405)
T d1jf9a_         100 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  178 (405)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhcc-CCcEEEEEecCCCcccc
Confidence            88753    4889999999999975    455566789999999987888999999999997 79999999999999999


Q ss_pred             CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      .+|.+++.++++. ++++++|.+++.....-.    +...+-.+++.|+.|.+|..|  +|+++++++..+.+
T Consensus       179 ~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id----~~~~~~D~~~~s~hK~~Gp~G--~g~l~v~~~~~~~~  245 (405)
T d1jf9a_         179 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEM  245 (405)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCSS--CEEEEECHHHHTTC
T ss_pred             cCchHHhhhHHHHcCCeeecccceeccccccc----hhhcCCceeeccccccccCCC--ceeeeechhhhccc
Confidence            9999999999987 999999999874332111    122344599999999776555  89999999876643

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=3e-16  Score=146.91  Aligned_cols=224  Identities=15%  Similarity=0.154  Sum_probs=167.6

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-C-cCCCC-------CC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~-------Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +++++++|+.++. .+...|+++++..+ + .++.+       +. ..-..+|++.||+++|.  +..++.+++..+...
T Consensus        36 ~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g~--e~al~~~SG~~an~~  113 (383)
T d1bs0a_          36 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY--SRALLFISGFAANQA  113 (383)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHH
T ss_pred             CCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcCC--CceEEecccchhhHH
Confidence            3557899987643 55667888877654 2 12111       11 12357999999999995  477788888889999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHH
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDED  239 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~  239 (334)
                      ++.++..++|.|++....|......++..+.+++.++..     |++++++.+..  .+.++|+++.+++++|.+.+.++
T Consensus       114 ~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hn-----d~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~pl~~  188 (383)
T d1bs0a_         114 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHN-----DVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  188 (383)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTT-----CHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHhhcCCCceEEeeccccHHHhhccccCCCcceEecch-----HHHHHHHHhcccCCCceEEEecCCCCCCCcccchhH
Confidence            999999999999999999999988888899999988742     67788777643  34568888899999999999999


Q ss_pred             HHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC----C
Q 019868          240 LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (334)
Q Consensus       240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~----~  312 (334)
                      +.+|++. ++++++||+|..+..++....  ........+++.|++|.+|..|   |++.++.++++.++.....    .
T Consensus       189 l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~G---g~v~~~~~~~~~l~~~~~~~~~s~  265 (383)
T d1bs0a_         189 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYST  265 (383)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSSB
T ss_pred             HHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccccccc---cccccchhHHHHHHhhchhhhhcc
Confidence            9999988 999999999988765432221  1112345577889999999888   9999999999988766543    2


Q ss_pred             CCcHHHHHHHHHHh
Q 019868          313 NVSVAAEVAACAAL  326 (334)
Q Consensus       313 ~~~~~~q~aa~~~L  326 (334)
                      ..++....++.+++
T Consensus       266 ~~~p~~~aa~~~a~  279 (383)
T d1bs0a_         266 SMPPAQAQALRASL  279 (383)
T ss_dssp             CCCHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHH
Confidence            34554444444443

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.69  E-value=6.4e-16  Score=144.08  Aligned_cols=189  Identities=16%  Similarity=0.162  Sum_probs=150.2

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~  202 (334)
                      .++....|++.||++.+.  +..+++++++.++..++.+++++||+|++++..|+.....++.    .|.++..++.   
T Consensus        57 ~nPT~~~LE~~la~LEg~--~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~---  131 (392)
T d1gc0a_          57 SNPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM---  131 (392)
T ss_dssp             CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT---
T ss_pred             CChHHHHHHHHHHHHhCC--cceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc---
Confidence            456678999999999983  4678889999999999999999999999999999876665543    6999988863   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                        -|+++++++++ +++|+|++.+|.|||..+.+.+.+.++++. ++++|+|..|..-..- .+.    +.+-.++++|.
T Consensus       132 --~d~~~~~~ai~-~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~~-~Pl----~~GaDivihS~  203 (392)
T d1gc0a_         132 --ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-RPL----ELGADLVVHSA  203 (392)
T ss_dssp             --TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-CGG----GGTCSEEEEET
T ss_pred             --cCHHHHHHhCC-CCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCcccc-ChH----HhCCCEEEEec
Confidence              37899999997 789999999999999999999999999998 9999999999732211 111    33455999999


Q ss_pred             chhhc-ccccchheeEcCHHHHHHHH--Hhc--CCCCCcHHHHHHHHHHhcC
Q 019868          282 SKRAG-LAGLRVGYGAFPLSIIEYLW--RAK--QPYNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~g-l~G~R~G~l~~~~~~i~~l~--~~~--~~~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++ -...-.|.++++++.+++++  ..+  ....+++...+.+...|+.
T Consensus       204 TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T  255 (392)
T d1gc0a_         204 TKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT  255 (392)
T ss_dssp             TTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT
T ss_pred             ceeecCCcccccccccchhHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc
Confidence            99874 34466678888888776543  222  2356788888777777765

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.68  E-value=2.9e-15  Score=139.63  Aligned_cols=207  Identities=18%  Similarity=0.151  Sum_probs=155.1

Q ss_pred             CCHHHHHHHhcCcCCCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH
Q 019868          109 PPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF  185 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~  185 (334)
                      .+++..+....-...+.|.   ++....|.+.+|++.|.  +..+++++++.++..++..++++||+|++++..|.....
T Consensus        40 ~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg--~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~  117 (397)
T d1y4ia1          40 SAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHA  117 (397)
T ss_dssp             SHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHH
T ss_pred             CHHHHHHhhcCCcCCceeeCCCCHHHHHHHHHHHHHhCC--ccceeehHHHHHHHHHHhhccCCCCeeeeecccccccch
Confidence            3344444444333345563   45577899999999874  467788899999999999999999999999999976544


Q ss_pred             H----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc
Q 019868          186 D----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS  260 (334)
Q Consensus       186 ~----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~  260 (334)
                      .    ....|.++..++.     -|++.++++++ +++|+|++.+|.||+..+.+.+.+.++++. ++++|+|..|..-.
T Consensus       118 ~~~~~l~~~Gi~~~~vd~-----~d~~~~~~~i~-~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~  191 (397)
T d1y4ia1         118 FLSHSMPKFGINVRFVDA-----GKPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPY  191 (397)
T ss_dssp             HHHTHHHHTTCEEEEECT-----TSHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred             hhhcccCCCceEeeccCC-----CCHHHHHHhcC-CCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCcc
Confidence            3    4458999999864     27899999997 799999999999999999999999999987 99999999987422


Q ss_pred             CCCCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHH--HhcC--CCCCcHHHHHHHHHHhcC
Q 019868          261 GLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLW--RAKQ--PYNVSVAAEVAACAALQN  328 (334)
Q Consensus       261 ~~~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~--~~~~--~~~~~~~~q~aa~~~L~~  328 (334)
                      .- .+.    +.+-.|+++|.+|.++-.+ .=.|.++++++.+...+  ..+.  ...+++...+.+...|+.
T Consensus       192 ~~-~Pl----~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T  259 (397)
T d1y4ia1         192 CQ-QPL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT  259 (397)
T ss_dssp             TC-CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT
T ss_pred             cC-cch----hcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc
Confidence            11 111    3344599999999874333 44567777888776543  3332  346788888777777764

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.68  E-value=7.5e-17  Score=151.31  Aligned_cols=222  Identities=21%  Similarity=0.144  Sum_probs=160.6

Q ss_pred             CCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCC------CC-CCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANEN-PYGPPPEVREALGQ-LK-FPY------IY-PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~------~Y-p~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++++|+.|+. .+...|+++++..+ +. ++.      .+ ... -..+|++++|+++|.  +..++.+.+..+...++
T Consensus        45 ~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~--e~all~~sG~~An~~~i  122 (396)
T d2bwna1          45 QDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK--EAALVFSSAYNANDATL  122 (396)
T ss_dssp             EEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHH
T ss_pred             eEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhCC--CceeeeecchHHHHHHH
Confidence            56899988754 56778888877654 21 211      11 222 246899999999996  35666666666666667


Q ss_pred             HHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhc---ccCCceEEEEeCCCCccccCCcHH
Q 019868          164 RCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV---EREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       164 ~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l---~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .++  ..+||.|+...-.|......++..+++++.++..     |.+++++.+   .+.+.++|++....+.+|.+.|.+
T Consensus       123 ~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-----d~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl~  197 (396)
T d2bwna1         123 STLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIK  197 (396)
T ss_dssp             HHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHH
T ss_pred             HHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-----hHHHhhhHHhhhcccCceeEEEEeeccCcccccccH
Confidence            666  4788999999999999999999999999988743     455555544   334456777779999999999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCCCchhh---h-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEW---V-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~---~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--  311 (334)
                      ++.+|++. +.++++||+|+....++.-...   . ...+..++++||||+||..|   ||+.+++++++.+.....+  
T Consensus       198 ~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~~~~i~~l~~~~~~~i  274 (396)
T d2bwna1         198 EICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGFI  274 (396)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHHH
T ss_pred             hHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchhHHHHHHHHhhcchhh
Confidence            99999998 9999999999877643321111   1 12345799999999999888   9999999999999876654  


Q ss_pred             C--CCcHHHHHHHHHHh
Q 019868          312 Y--NVSVAAEVAACAAL  326 (334)
Q Consensus       312 ~--~~~~~~q~aa~~~L  326 (334)
                      |  .+++....++.+++
T Consensus       275 fStalpp~~~aa~~~al  291 (396)
T d2bwna1         275 FSTSLPPAIAAGAQASI  291 (396)
T ss_dssp             TSBCCCHHHHHHHHHHH
T ss_pred             hcccCcHHHHHHHHHHH
Confidence            3  34454444444433

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=4.1e-15  Score=139.89  Aligned_cols=226  Identities=16%  Similarity=0.176  Sum_probs=167.3

Q ss_pred             CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCCC--C-----Cc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIY--P-----DP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~Y--p-----~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +++++|||+.++. .+...|+++++..+ ++ ++..+  +     .. -..+|.+.+|+++|.  +.+++++++.++...
T Consensus        43 dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~g~--e~al~~~SG~~An~~  120 (401)
T d1fc4a_          43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM--EDAILYSSCFDANGG  120 (401)
T ss_dssp             TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHT
T ss_pred             CCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhhcC--CceEEecchhhhhHH
Confidence            4677899987653 56678999888665 31 22222  1     12 256899999999985  578899999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhc---cc--CCceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV---ER--EKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l---~~--~~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.++++++|.|++..-.|..+...+...++++..++..     |.+++++.+   +.  ....+|++.+..+..|...+
T Consensus       121 ~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~-----d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~  195 (401)
T d1fc4a_         121 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANN-----DMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN  195 (401)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTT-----CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcCC-----ChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhh
Confidence            999999999999999999999888888899998888742     555555543   22  23456666688889999999


Q ss_pred             HHHHHHHHhC-CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868          237 DEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~  311 (334)
                      .+++.+|++. ++++|+||++..+.....   ...... ..+..+++.||+|.+|  |...|++.+++++++.+......
T Consensus       196 L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~~~~~~~l~~~~~~  273 (401)
T d1fc4a_         196 LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAARKEVVEWLRQRSRP  273 (401)
T ss_dssp             HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEECHHHHHHHHHHCHH
T ss_pred             hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCCHHHHHHHHcCChh
Confidence            9999999998 999999999998765332   122222 2355689999999884  44459999999999988755433


Q ss_pred             ----CCCcHHHHHHHHHHhc
Q 019868          312 ----YNVSVAAEVAACAALQ  327 (334)
Q Consensus       312 ----~~~~~~~q~aa~~~L~  327 (334)
                          ..+++....++..+++
T Consensus       274 ~~~s~~l~p~~~~aa~~~l~  293 (401)
T d1fc4a_         274 YLFSNSLAPAIVAASIKVLE  293 (401)
T ss_dssp             HHHSCCCCHHHHHHHHHHHH
T ss_pred             hhhcCCCCHHHHHHHHhhhc
Confidence                3566666666666654

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.62  E-value=1.4e-14  Score=135.19  Aligned_cols=209  Identities=15%  Similarity=0.168  Sum_probs=153.8

Q ss_pred             CCCHHHHHHHhcCcCCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH
Q 019868          108 GPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE  184 (334)
Q Consensus       108 ~~~~~v~~al~~~~~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~  184 (334)
                      +..++..+....-...+.|   .++....|.+.||++.|.  +..+++++++.++..++.+++++||.|++....|+...
T Consensus        43 ~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~  120 (398)
T d1qgna_          43 NKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTR  120 (398)
T ss_dssp             SSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHH
T ss_pred             CCHHHHHHHhcCCcCCceecCCCChHHHHHHHHHHHHhCC--ceEEEecCcchHHHHHHhhcccccccccccccccchhh
Confidence            3334554444433344556   355677899999999884  57888899999999999999999999999999998765


Q ss_pred             HHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc
Q 019868          185 FDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF  259 (334)
Q Consensus       185 ~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~  259 (334)
                      ..+.    ..|.++..++..     |.+..++.+..+++++|++.+|.||+..+.+.+.+.++++. ++++|+|+.+.-.
T Consensus       121 ~l~~~~~~~~gi~~~~~~~~-----~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP  195 (398)
T d1qgna_         121 IFIETILPKMGITATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATP  195 (398)
T ss_dssp             HHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred             hhhccccccccccccccccc-----chhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeecc
Confidence            5544    368888887632     44555554444789999999999999999999999999987 9999999998632


Q ss_pred             cCCCCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ..-.+     -..+-.|+++|.+|.++-.| .=.|.++.+++.++.++.....  ..+++...+.+...|+.
T Consensus       196 ~~~~P-----l~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T  262 (398)
T d1qgna_         196 LNQKA-----LALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT  262 (398)
T ss_dssp             TTCCT-----TTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG
T ss_pred             ccCCc-----hhhCCCEEEEechhhcCcccceeehhhcchhhhhhhhhhhcccCCCcCCHHHHHHHHhcchH
Confidence            21111     13345699999999875443 3456667788888877766554  35777777777776654

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=1.7e-14  Score=133.97  Aligned_cols=188  Identities=15%  Similarity=0.173  Sum_probs=143.8

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~  202 (334)
                      .++....|.+.||++-+.  +..+++++++.++..+ ..++++||+|++..+.|......++.    .|.++..++.   
T Consensus        47 ~nPt~~~le~~la~LE~~--~~a~~fsSGMaAisal-l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~---  120 (380)
T d1ibja_          47 GNPTRDALESLLAKLDKA--DRAFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---  120 (380)
T ss_dssp             CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT---
T ss_pred             CChHHHHHHHHHHHHcCC--ceEEehhhHHHHHHHH-HHhhCCCCEEEEEecccccccchhhhhhccccccccccCc---
Confidence            455678899999999984  4677778888999754 56899999999999999877666554    6888888753   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                        .|+++++++++ +++|+|++.+|.||+..+.|.+.+.++++. ++++|+|+.+.....- .+.    +.+-+++++|.
T Consensus       121 --~~~~~~~~ai~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~-~Pl----~~GaDiVvhS~  192 (380)
T d1ibja_         121 --TKLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSA  192 (380)
T ss_dssp             --TSHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEET
T ss_pred             --chHHHHHHHhc-cCccEEEeccccccccccccHHHHHHHHHHcCCeEEeeccccccccc-ccc----ccCCCEEEecc
Confidence              37899999997 789999999999999999999999999998 9999999999743221 111    33456999999


Q ss_pred             chhhcccc-cchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          282 SKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++-.| .=.|.++.+ +++.+.+...+..  -.+++...+.+...|++
T Consensus       193 TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T  243 (380)
T d1ibja_         193 TKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT  243 (380)
T ss_dssp             TTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT
T ss_pred             cceeccccCccccccccchhhHHHHHHhhccccCCcCCHHHHHHHHhcchh
Confidence            99875343 345666665 5666766655443  34777777777777765

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.61  E-value=1.3e-14  Score=136.60  Aligned_cols=204  Identities=19%  Similarity=0.144  Sum_probs=155.3

Q ss_pred             CCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCC----CCCC-----cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPY----IYPD-----PESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~----~Yp~-----~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ++++|.|+.+... +.|+.+.+++.+ +.  ..+    .|..     .-.++.|+.+|+++|++ ++.|+++++++++++
T Consensus        20 ~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n   98 (408)
T d1t3ia_          20 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAIN   98 (408)
T ss_dssp             TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred             CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHH
Confidence            3457889877654 467888887765 21  111    1111     12347899999999996 578999999999999


Q ss_pred             HHHHHh----cCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868          161 LIMRCV----LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (334)
Q Consensus       161 ~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG  232 (334)
                      +++..+    .++||+|++.+-.|+..    ...++..|.++..+|.+.+...|.+.+++.++ +++++|.+++.+|-||
T Consensus        99 ~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~-~~t~lv~i~~~~~~tG  177 (408)
T d1t3ia_          99 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLG  177 (408)
T ss_dssp             HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTC
T ss_pred             HHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccC-CCceEEEEeccccccc
Confidence            988652    47899999999899743    34455679999999977777889999999997 7999999999999999


Q ss_pred             cCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ...+.+++.++++. ++++++|.+++.....-    .+...+-++++.|..|.+|.  -.+|+++++++....+
T Consensus       178 ~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~i----d~~~~~~D~~~~s~hK~~gp--~G~g~l~v~~~~~~~~  245 (408)
T d1t3ia_         178 CVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL----DVQLIDCDWLVASGHKMCAP--TGIGFLYGKEEILEAM  245 (408)
T ss_dssp             BBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCSEEEEEGGGTTSC--TTCEEEEECHHHHHHS
T ss_pred             ccCcHHHHhhhhhccCceeeeccceecccccc----cccccCCceEEeccccccCC--CCccccccchhhhhcC
Confidence            99999999999987 99999999887433211    12223445999999996553  3489999999887644

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.60  E-value=6.8e-14  Score=130.51  Aligned_cols=207  Identities=14%  Similarity=0.134  Sum_probs=153.1

Q ss_pred             CCHHHHHHHhcCcCCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH
Q 019868          109 PPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF  185 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~  185 (334)
                      ..++..+.......++.|   .++....|.+.|+++-|.  +..+++++++.++..++.+++++||.|++.+..|+....
T Consensus        36 ~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~--~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~  113 (394)
T d1e5ea_          36 NCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKT--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHA  113 (394)
T ss_dssp             SHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHH
T ss_pred             CHHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCC--cceeeeccchHHHHHHHHhhcccccccccccceeehhhH
Confidence            334555544443334555   355577899999999884  467888899999999999999999999999999975433


Q ss_pred             ----HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCc
Q 019868          186 ----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEF  259 (334)
Q Consensus       186 ----~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~  259 (334)
                          .....|.++..++..     |+++++++++ +++++|++..|.||+..+.+.+.+.++++.  ++++|+|+.+...
T Consensus       114 ~~~~~~~~~gi~~~~~d~~-----d~~~~~~~i~-~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~atP  187 (394)
T d1e5ea_         114 LFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSP  187 (394)
T ss_dssp             HHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCT
T ss_pred             hHHHHhhccceeeeccCCC-----CHHHHHHhhc-ccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccCc
Confidence                345589999998743     5678999997 789999999999999999999988876654  7999999998643


Q ss_pred             cCCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhcC
Q 019868          260 SGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~--~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ..- .+.    +.+-.|+++|.+|.++ -...-.|.++++.+.+...+..  +..  ..+++...+.+...|+.
T Consensus       188 ~~~-~Pl----~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T  256 (394)
T d1e5ea_         188 MIT-NPV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLST  256 (394)
T ss_dssp             TTC-CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT
T ss_pred             ccC-Cch----hcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh
Confidence            221 112    2344599999999874 3345567778888877765433  222  34788888877777765

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=3.6e-14  Score=131.78  Aligned_cols=189  Identities=16%  Similarity=0.133  Sum_probs=143.9

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~  202 (334)
                      .+|....|++.||++.|.  +..+++++++.++..++.+++++||.|++.+..|......+    ...|.++..+..   
T Consensus        48 ~nPt~~~le~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~---  122 (384)
T d1cs1a_          48 GNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ---  122 (384)
T ss_dssp             CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT---
T ss_pred             CCHHHHHHHHHHHHHhCC--CceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccccC---
Confidence            456678999999999984  56888899999999999999999999999999997554333    336777777653   


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (334)
                        .|.+.++.++. +++++|++.+|.|||..+.+.+.+.++++. ++++|+|+.+.-...- .+.    +.+-+|+++|.
T Consensus       123 --~d~~~~~~~~~-~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~-~Pl----~~GaDiVvhS~  194 (384)
T d1cs1a_         123 --GDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-NPL----ALGADLVLHSC  194 (384)
T ss_dssp             --TCHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CGG----GGTCSEEEEET
T ss_pred             --CCHHHHHhhcc-ccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccc-ccc----ccCCCEEEEcc
Confidence              37889999887 799999999999999999999999999997 9999999999532211 111    23445999999


Q ss_pred             chhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++-.| .=.|.+++ ++++.+.+...+..  ..+++...+.+...|+.
T Consensus       195 TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T  245 (384)
T d1cs1a_         195 TKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT  245 (384)
T ss_dssp             TTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT
T ss_pred             ccccccCCCcccccccCCchhhhhhhhhhhhhhhhccccccHHHHhhccch
Confidence            99885333 44466666 45665655544433  45777777777776664

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.58  E-value=1.7e-14  Score=133.73  Aligned_cols=171  Identities=17%  Similarity=0.148  Sum_probs=134.5

Q ss_pred             CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCC
Q 019868          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL  205 (334)
Q Consensus       128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~  205 (334)
                      .+...+|++.+|+++|.  ++++++++++.|+..++.++ +++||+|+++..+|......+...|++++.++.+ +++.+
T Consensus        30 G~~v~~~E~~la~~~g~--~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~~~~~~ai~~~g~~pv~~d~~~~~~~~  107 (376)
T d1mdoa_          30 GPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMV  107 (376)
T ss_dssp             SHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCB
T ss_pred             CHHHHHHHHHHHHHHCc--CeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecccccccccchhccccceeeecccccccCC
Confidence            34578999999999996  47788888899999999998 7999999999999999999999999999999854 56889


Q ss_pred             CHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCCch
Q 019868          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSK  283 (334)
Q Consensus       206 d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~SK  283 (334)
                      |++.++++++ +++++|++.   |..|...+.+++.++++. +++||+|.+++.+.. .+...   +..+..++-...+|
T Consensus       108 d~~~l~~~i~-~~tkaIi~~---h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~~~~~~~---g~~g~~~~Sf~~~K  180 (376)
T d1mdoa_         108 TPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHI---GARGTAIFSFHAIK  180 (376)
T ss_dssp             CHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEET---TSSSEEEEECCTTS
T ss_pred             CHHHHHHhcC-CCCeEEEEe---CCCCCccchhHHHHHHHhcCceEEeccchhccCeeCCeec---ccccCccccCCCcC
Confidence            9999999998 689999965   578999999999999998 999999999986542 22111   12232333334468


Q ss_pred             hhcccccchheeEc-CHHHHHHHHHhc
Q 019868          284 RAGLAGLRVGYGAF-PLSIIEYLWRAK  309 (334)
Q Consensus       284 ~~gl~G~R~G~l~~-~~~~i~~l~~~~  309 (334)
                      .++ +| ..|.+++ ++++.+.++..+
T Consensus       181 ~l~-~g-~GG~i~t~~~~l~~~~~~~~  205 (376)
T d1mdoa_         181 NIT-CA-EGGIVVTDNPQFADKLRSLK  205 (376)
T ss_dssp             SSC-SS-SCEEEEESCHHHHHHHHHHT
T ss_pred             CCC-CC-CCCEEEEechhHHHHHHhhc
Confidence            775 33 3577766 556777666554

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=3.7e-14  Score=132.21  Aligned_cols=209  Identities=10%  Similarity=0.068  Sum_probs=154.6

Q ss_pred             CCCCHHHHHHHhcCcC-CCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh
Q 019868          107 YGPPPEVREALGQLKF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM  182 (334)
Q Consensus       107 ~~~~~~v~~al~~~~~-~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~  182 (334)
                      |...++..++...... .+.|   .+|....|.+.+|++-|.  +..+++++++.|+..++.+++++||.|++....|..
T Consensus        32 f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~--~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~  109 (391)
T d1cl1a_          32 FDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEP  109 (391)
T ss_dssp             CSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHH
T ss_pred             eCCHHHHHHHhcCCccCceEeECCCChhHHHHHHHHHHHhCC--ccEEEeccccceeeehhhcccCCCCeEEEecccccc
Confidence            3334555555554222 2345   455678899999999884  578899999999999999999999999999999987


Q ss_pred             HHHHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccC
Q 019868          183 YEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA  255 (334)
Q Consensus       183 ~~~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDea  255 (334)
                      ....++    ..|.++..++..     |.+.++++++ +++++|++.+|.||+..+.+.+.+.++++.   ++++|+|+.
T Consensus       110 T~~l~~~~l~~~Gi~~~~~d~~-----d~~~~~~~i~-~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT  183 (391)
T d1cl1a_         110 SQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT  183 (391)
T ss_dssp             HHHHHHHTGGGGTCEEEEECTT-----CGGGGGGTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred             hhhhhhhcccccccccccccCc-----cccccccccc-cccceeeecccCcccccccccHHHHHHHHhccCCcEEEEecc
Confidence            655544    378888887632     5688888887 789999999999999999999999999853   899999999


Q ss_pred             CcCccCCCCchhhhcCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      +.....-. +.    +.+-+++++|.+|.++-.| .=.|.++.+++..+.+......  -.+++..++.+...|+.
T Consensus       184 ~atP~~~~-Pl----~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T  254 (391)
T d1cl1a_         184 WAAGVLFK-AL----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRT  254 (391)
T ss_dssp             TTTTTSSC-GG----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             ccchhhhc-cc----ccccceEEeecchhccccccccccceeccccccccchhhhhcccccCCchhhhhhhccchh
Confidence            97433211 11    2344599999999875333 4456777777777666544432  45677777777776664

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.55  E-value=9.8e-14  Score=129.53  Aligned_cols=192  Identities=20%  Similarity=0.188  Sum_probs=146.4

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-CCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFS  204 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~~~~~  204 (334)
                      ..+...+|++.+|+++|.+  +++.+++++.|+.++++++ +++||+|+++..+|......+...|++++.++. +.++.
T Consensus        32 ~g~~v~~fE~~~a~~~g~~--~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t~~a~~~ai~~~g~~p~~~d~~~~~~~  109 (384)
T d1b9ha_          32 GGDEVNSFEREFAAHHGAA--HALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYN  109 (384)
T ss_dssp             TCSHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCC
T ss_pred             CCHHHHHHHHHHHHHHCcC--eEEEeCCHHHHHHHHHHHcCCCCCCEEEEeccccccccccccccccccccccccccccc
Confidence            3445789999999999965  6888899999999999987 689999999999999999999999999999984 45688


Q ss_pred             CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCCc
Q 019868          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS  282 (334)
Q Consensus       205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~S  282 (334)
                      +|++.+++.+. +++++|+   +.+..|...+.+++.++++. ++.+|+|.+++.++. .+......  .+-.++-.+.+
T Consensus       110 ~d~~~~~~~i~-~~tk~i~---~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~~g~~--g~~~~~Sf~~~  183 (384)
T d1b9ha_         110 LDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGEL--DSIATFSFQNG  183 (384)
T ss_dssp             BCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGS--SSCEEEECCTT
T ss_pred             cchhhhccccc-ccccccc---cccccccccccccchhhhhhhhhhhhhhhceecccccCCEecCcc--cccceeccccc
Confidence            99999999997 7899987   66788999999999999998 999999999987652 23332222  23234444558


Q ss_pred             hhhcccccchheeEc-CHHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHhcC
Q 019868          283 KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQN  328 (334)
Q Consensus       283 K~~gl~G~R~G~l~~-~~~~i~~l~~~~~~-------------------~~~~~~~q~aa~~~L~~  328 (334)
                      |.++ .| ..|.+++ ++++.+.++..+..                   +.++.+..+++..-|++
T Consensus       184 K~i~-~g-~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aaig~~qL~~  247 (384)
T d1b9ha_         184 KLMT-AG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLAR  247 (384)
T ss_dssp             SSSC-SS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTT
T ss_pred             cccc-cc-ccchhhhhhHHHHHHHHHHHhcCCCCccccccccccccccccccccchhhhhhhhhhh
Confidence            8765 33 3577766 56666666544311                   23566766666666665

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.54  E-value=1.4e-13  Score=125.65  Aligned_cols=183  Identities=16%  Similarity=0.124  Sum_probs=139.2

Q ss_pred             HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCCCCCHH
Q 019868          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVE  208 (334)
Q Consensus       133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~~~d~~  208 (334)
                      .|++.+|++.|.  +..+++++++.|+..++.+++++||+|+++...|.....    .....|.++..++..     |++
T Consensus         2 aLE~~la~Leg~--~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~-----d~~   74 (331)
T d1pffa_           2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA-----VPG   74 (331)
T ss_dssp             HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STT
T ss_pred             HHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEeccc-----chh
Confidence            578899999873  578888999999999999999999999999999975433    455689999988743     678


Q ss_pred             HHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHh-C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       209 ~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~-~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (334)
                      .++++++ +++++|++.+|.||+..+.+.+.+.++++ . ++++|+|+.+.....-. +.    +.+-.++++|.+|.++
T Consensus        75 ~~~~~i~-~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~-pl----~~GaDiVv~S~TKy~~  148 (331)
T d1pffa_          75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-PL----DLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-GG----GGTCSEEEEETTTTTS
T ss_pred             hHhhhcc-cccceeeeecccccccccccchhhhhhhhcccCceEEeecccccccccc-cc----ccCCCEEEecchhhcC
Confidence            9999997 78999999999999999999999998864 3 89999999987432211 11    2234599999999884


Q ss_pred             cc-ccchheeEcCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhcC
Q 019868          287 LA-GLRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       287 l~-G~R~G~l~~~~~~i~~l~~~--~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      -. ..-.|.++.+++.+......  +..  ..+++...+.+...|+.
T Consensus       149 Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T  195 (331)
T d1pffa_         149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT  195 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH
T ss_pred             CCCccccccccccccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH
Confidence            33 34557777887766655432  222  34677777776666653

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.53  E-value=7.3e-15  Score=132.54  Aligned_cols=205  Identities=18%  Similarity=0.197  Sum_probs=143.6

Q ss_pred             eecCCCCCCCCCCHHHHHHHhcCcCC-CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 019868           98 VKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (334)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~-~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~  175 (334)
                      |||.. ++-..|+|++++|+.+...+ ..| +++...+|++.+|+++|.  +++++++|+++++..+++++.++||.+++
T Consensus         2 ~~~~~-~~~t~p~p~v~~A~~~a~~g~~~yg~~p~~~~le~~lA~~~G~--~~~~~~~sGt~A~~~al~a~~~~g~~~~~   78 (343)
T d1m6sa_           2 IDLRS-DTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGK--EAALFVPSGTMGNQVSIMAHTQRGDEVIL   78 (343)
T ss_dssp             EECSC-GGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             ccccc-ccCCCCCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHHHCC--CeEEEeCCHHHHHHHHHHHHhccCCceec
Confidence            66643 33344578999999875432 345 778889999999999995  47888899999999999999999999999


Q ss_pred             cCCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEE-eCCCCccccCCcHHHHHHHHhC
Q 019868          176 CPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFL-TSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       176 ~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l-~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      ..+.+..+.   ..+...+..+..++.. .+..|++.+++.+...     ++..+++ +.++|+.|.+.+.+++.+|++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~  157 (343)
T d1m6sa_          79 EADSHIFWYEVGAMAVLSGVMPHPVPGK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTI  157 (343)
T ss_dssp             ETTCHHHHSSTTHHHHHTCCEEEEECEE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHH
T ss_pred             cccccceeeecccccccccceeeccccc-cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHHH
Confidence            998886543   3444566777777643 3467999999888631     2344444 4778999999999999998864


Q ss_pred             ----CCeEEEccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868          247 ----PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (334)
Q Consensus       247 ----~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~  309 (334)
                          ++++++|++|..+....  .......... ...+.+.+|  +..|.+.|+++...+.+.......
T Consensus       158 ~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~  223 (343)
T d1m6sa_         158 AKEHGINVHIDGARIFNASIASGVPVKEYAGYA-DSVMFCLSK--GLCAPVGSVVVGDRDFIERARKAR  223 (343)
T ss_dssp             HHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC-SEEEEESSS--TTCCSSCEEEEECHHHHHHHHHHH
T ss_pred             HHhcCeEEEeccccccccccccccchhhhcccc-ccccccccc--cccccccccccccHHHHhhhHhhC
Confidence                99999999998765211  1111111112 233333333  445777889888888776665444

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.52  E-value=1.4e-13  Score=122.31  Aligned_cols=226  Identities=11%  Similarity=0.063  Sum_probs=138.0

Q ss_pred             CCCCCCCCCHHHHHHHhcC--cCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 019868          102 ANENPYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (334)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~--~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p  178 (334)
                      .|+|+.+++|++++|+.+.  ....+| +++..+++|+.+|+++|+++++|++|+|+++++..++..+..+++++++..+
T Consensus         5 ~nd~~~g~~P~v~eAl~~~~~~~~~~y~~~~~~~~lr~~ia~~~g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~~~   84 (340)
T d1svva_           5 VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQL   84 (340)
T ss_dssp             SCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETT
T ss_pred             ccCCCCCCCHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHHhhhccccccccc
Confidence            4789999999999999862  344667 5667789999999999999999999999999999999999999999999998


Q ss_pred             CChhHHHH--HHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868          179 TFTMYEFD--AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (334)
Q Consensus       179 ~y~~~~~~--~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~  247 (334)
                      .+..+...  ....+.....+..... ..+.+...+....     .....++++.+.|.+|.+...+++..+++.    +
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  163 (340)
T d1svva_          85 GHISTHETGAIEATGHKVVTAPCPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHG  163 (340)
T ss_dssp             SHHHHSSTTHHHHTTCCEEEECCTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHT
T ss_pred             cceeeeecccccccceeeeecccccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhccccccc
Confidence            88655322  2234444444443222 3333333333211     123344445444556777777777766553    8


Q ss_pred             CeEEEccCCcCccC--CC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH----HHHHHhcCCCCCcHHHH
Q 019868          248 ILVVLDEAYTEFSG--LE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII----EYLWRAKQPYNVSVAAE  319 (334)
Q Consensus       248 ~~lIvDeay~~~~~--~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i----~~l~~~~~~~~~~~~~q  319 (334)
                      .++++|++|.....  ..  ...... .....+...+..|..+  +.+.++........    ..........+......
T Consensus       164 ~~~~~d~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (340)
T d1svva_         164 LYLFLDGARLASALSSPVNDLTLADI-ARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMAKGWLLG  240 (340)
T ss_dssp             CEEEEECTTHHHHHTSTTCCCCHHHH-HHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHH
T ss_pred             ceeeeeccceeeeecccccccccccc-cccceeeecCCccccc--cccccccccchhhhhhhhhhcccccCccchhhHHH
Confidence            99999999965331  11  111111 1112344445555443  33344444433222    22222222244555666


Q ss_pred             HHHHHHhcCchh
Q 019868          320 VAACAALQNPIY  331 (334)
Q Consensus       320 ~aa~~~L~~~~~  331 (334)
                      +++.+.+++..+
T Consensus       241 aa~~~~~~~~~~  252 (340)
T d1svva_         241 IQFEVLMKDNLF  252 (340)
T ss_dssp             HHHHHHTSTTHH
T ss_pred             HHHHHHhhhhHH
Confidence            666666666443

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.50  E-value=2.2e-13  Score=127.66  Aligned_cols=176  Identities=19%  Similarity=0.212  Sum_probs=131.3

Q ss_pred             CCHHHHHHHhcCcCCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH
Q 019868          109 PPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF  185 (334)
Q Consensus       109 ~~~~v~~al~~~~~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~  185 (334)
                      .+++..+.......++.|   .++....|.++||++.+.  +..+++++++.++..++.+++++||+|+++...|+....
T Consensus        35 ~~~~~~~~~~~~~~~~~YsR~~nPT~~~LE~~la~LE~~--~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~  112 (421)
T d2ctza1          35 SPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFN  112 (421)
T ss_dssp             CHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHH
T ss_pred             CHHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhH
Confidence            334444444433333445   355677899999999984  467888888999999999999999999999999976554


Q ss_pred             HH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc--C
Q 019868          186 DA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT--E  258 (334)
Q Consensus       186 ~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~--~  258 (334)
                      .+    ...|.++..++..+    +.+..+..++ +++++|++.+|.|||..+.|.+.+.++++. |+++|+|+.++  +
T Consensus       113 l~~~~~~~~gi~~~~~d~~~----~~~~~~~~~~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP  187 (421)
T d2ctza1         113 QFKVTLKRLGIEVRFTSREE----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG  187 (421)
T ss_dssp             HHHTHHHHTTCEEEECCTTC----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG
T ss_pred             HHHHHHhhccccceeccccc----CcchhccccC-CCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEecccccccc
Confidence            43    45899998876321    3455566665 799999999999999999999999999998 99999999986  2


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhhcccccch-heeEc
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAF  297 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~-G~l~~  297 (334)
                      +...  +.    +.+-.|+++|.+|.++-.|--+ |.++.
T Consensus       188 ~~~~--Pl----~~GaDiVvhS~TKyl~GHsD~l~G~vv~  221 (421)
T d2ctza1         188 YLLR--PL----AWGAALVTHSLTKWVGGHGAVIAGAIVD  221 (421)
T ss_dssp             TSCC--GG----GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             eecc--cc----ccCCcEEEEechhhccCCCCeEEEEEEc
Confidence            2221  11    2344599999999886445444 55554

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8.8e-14  Score=129.28  Aligned_cols=196  Identities=13%  Similarity=0.134  Sum_probs=150.0

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh
Q 019868          106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM  182 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~  182 (334)
                      |.+.+++|++++......++-++.  -..+.|+.+++++|++.+ .|+++.|+|++++.++..++.+|+++++....+..
T Consensus        27 P~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~~~~~~~~~~  106 (388)
T d1h0ca_          27 PSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGDSFLVGANGIWG  106 (388)
T ss_dssp             CCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCSSCCEEECBSSHHH
T ss_pred             CCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhccCCceeeeccccee
Confidence            556789999998764333433322  267899999999998644 68889999999999999999999999999887764


Q ss_pred             H--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc
Q 019868          183 Y--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF  259 (334)
Q Consensus       183 ~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~  259 (334)
                      .  ...+...+..+..+..+....+|.+++++.+...+++++++++.+|.||.+.+.+++.++++. ++++++|.++.-.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g  186 (388)
T d1h0ca_         107 QRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLG  186 (388)
T ss_dssp             HHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTTT
T ss_pred             eeeccccccccccccccccCCccccchHHHHHHhccCCcceEEEeeeeeccccccCHHHHHHHhhcccccceeccccccc
Confidence            3  334455677777777666678899999888876789999999999999999999999999998 9999999988743


Q ss_pred             cCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ...    -.+...+.++++.|..|.++.++ .+|+++.+++.++.+.
T Consensus       187 ~~~----~d~~~~~~D~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~  228 (388)
T d1h0ca_         187 GTP----LYMDRQGIDILYSGSQKALNAPP-GTSLISFSDKAKKKMY  228 (388)
T ss_dssp             TSC----CCTTTTTCSEEEEESSSTTCCCT-TCEEEEECHHHHHHHT
T ss_pred             ccc----ccccccccceecccccccccCCC-ceEEEeecHHHHHhhh
Confidence            321    11223445589999999875333 4678888888877654

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=4.7e-13  Score=124.64  Aligned_cols=187  Identities=14%  Similarity=0.124  Sum_probs=138.0

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSD  202 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~  202 (334)
                      .++....|.++|+++.+.  +..+++++++.++..++ .++.+||.|++....|......+..    .|.++..++    
T Consensus        53 gnPT~~~lE~~la~LE~~--~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~----  125 (393)
T d1n8pa_          53 QNPNRENLERAVAALENA--QYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN----  125 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES----
T ss_pred             CChHHHHHHHHHHHHhCC--ceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee----
Confidence            355577899999999873  45666777788887665 5788999999999999876555543    677766653    


Q ss_pred             CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHh----C-CCeEEEccCCcCccCCCCchhhhcCCCcEEE
Q 019868          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (334)
Q Consensus       203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~----~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~  277 (334)
                        .+.++++++++ +++++|++.+|.||+..+.+.+.+.++++    . ++++|+|+.|.....- .+.    +.+-.|+
T Consensus       126 --~~~~~~~~~i~-~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~-~Pl----~~GADiV  197 (393)
T d1n8pa_         126 --DLLNDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGADIV  197 (393)
T ss_dssp             --SHHHHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCSEE
T ss_pred             --cchHHHHHHhh-hhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccC-Cch----hhCCCEE
Confidence              24578888887 79999999999999999999999999987    3 8999999999632211 111    2344599


Q ss_pred             EcCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868          278 LRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (334)
Q Consensus       278 i~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~  328 (334)
                      ++|.+|.++ -...-.|.++. ++++.+.++..+..  ..+++...+.+...|+.
T Consensus       198 vhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T  252 (393)
T d1n8pa_         198 VHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT  252 (393)
T ss_dssp             EEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred             EEccccccCCCCccccceeeecchhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc
Confidence            999999874 33466677765 45677777655543  35677777766666654

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=8.3e-13  Score=122.36  Aligned_cols=194  Identities=13%  Similarity=0.088  Sum_probs=144.2

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCCCcC--hHHHHHHHHHhcC----CCCCCEEEeCCHHHHHHHHHHHhc---CCCCEEEEc
Q 019868          106 PYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSG----LESDHILVGCGADELIDLIMRCVL---DPGDKIVDC  176 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp~~g--~~~lr~~lA~~~~----~~~~~I~~t~G~~~~i~~~~~~l~---~~gd~Vl~~  176 (334)
                      |.+.+++|++|+......++-+...  ..++++.+.+.++    .+++.|++|.|+|++++.++..++   ++||+|++.
T Consensus        11 P~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~vlv~   90 (382)
T d2bkwa1          11 PIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVV   90 (382)
T ss_dssp             SCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEE
T ss_pred             CCCCCHHHHHHhCcccCCCCcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCceEEE
Confidence            4556788988886533323223221  4566677777765    356679999999999999999986   579999998


Q ss_pred             CCCChh--HHHHHHHCCCeEEEee-CCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeE
Q 019868          177 PPTFTM--YEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (334)
Q Consensus       177 ~p~y~~--~~~~~~~~G~~v~~v~-~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~l  250 (334)
                      .-.+..  +...++..|..+..+. .+.+...+.+.+++.+.+.+++++++++.+|.||...+.+++.++++.   ++++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~  170 (382)
T d2bkwa1          91 STGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFF  170 (382)
T ss_dssp             CSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEE
T ss_pred             EechhhhhhhhhccccccccccccccCCCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhccccccceee
Confidence            876654  3445666888887775 344556888999888876789999999999999999999999998764   7999


Q ss_pred             EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHH
Q 019868          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l  305 (334)
                      ++|.+.+-....    -.+...+-++++.|-.|.+ |.+|  +|+++++++.++.+
T Consensus       171 ~vDa~qs~g~~p----id~~~~giD~~~~s~~K~l~gP~G--~g~l~vs~~~~~~~  220 (382)
T d2bkwa1         171 VVDAVCSIGCEE----FEFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYA  220 (382)
T ss_dssp             EEECTTTTTTSC----CCTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHH
T ss_pred             eeeccccccccc----ccccccCeeEEeecccccCcCCCc--hhhhhccHHHHhhh
Confidence            999998743321    1122334569999999988 5566  79999998887654

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.42  E-value=4.9e-12  Score=113.35  Aligned_cols=163  Identities=12%  Similarity=0.122  Sum_probs=125.1

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC--cCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~  172 (334)
                      +.++|. ++|..+..|+|++|+.+.  .+...| +++...++|+.+|+++|.+ ..+++|+|++++...++..++.+++.
T Consensus         3 ~~~~f~-s~n~~g~~P~v~~A~~~a~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~v~f~~sGt~An~~a~~~~~~~~~~   80 (345)
T d1v72a1           3 PALGFS-SDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERD-VEVFLVPTGTAANALCLSAMTPPWGN   80 (345)
T ss_dssp             CCCBCS-CGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTSC-CEEEEESCHHHHHHHHHHTSCCTTEE
T ss_pred             CCcCcC-CCCCCCCCHHHHHHHHHHhccCccccCCCHHHHHHHHHHHHHHCCC-cEEEECCchHHHHHHHHHHHHhcCCc
Confidence            457887 477888899999999873  333455 6667889999999999964 56999999999999999988888888


Q ss_pred             EEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----Cce-EEEEeCCCCccccCCcHHHHHHH
Q 019868          173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPK-CIFLTSPNNPDGSIINDEDLLKI  243 (334)
Q Consensus       173 Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~-~i~l~~p~NPtG~~~~~~~l~~l  243 (334)
                      +++....+..+.   ......+..+..++...+...+++.+++.+...     .+. .++...++|+.|...+.++++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  160 (345)
T d1v72a1          81 IYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAI  160 (345)
T ss_dssp             EEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHH
T ss_pred             cccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccccccccceeeeeeccccccccccchhhhhH
Confidence            887776665332   233446777777776666788999999988632     223 34445788899999999888887


Q ss_pred             HhC----CCeEEEccCCcCcc
Q 019868          244 LEM----PILVVLDEAYTEFS  260 (334)
Q Consensus       244 ~~~----~~~lIvDeay~~~~  260 (334)
                      ++.    ++++++|+++..+.
T Consensus       161 ~~~~~~~~~~~~~D~~~~~~~  181 (345)
T d1v72a1         161 GDVCKSSSLGLHMDGSRFANA  181 (345)
T ss_dssp             HHHHHHTTCEEEEEETTHHHH
T ss_pred             HHHHHhcCceeeeccccccee
Confidence            654    99999999997543

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.40  E-value=1.4e-13  Score=128.55  Aligned_cols=204  Identities=12%  Similarity=0.040  Sum_probs=137.4

Q ss_pred             CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCC-C---------cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP-D---------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp-~---------~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      +++|.|+.+.... .|..+.+++.+ +......+ .         .-.+++|+.+|+++|+++++|++|+++++++..++
T Consensus        26 ~~~iYLd~as~g~-~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T~~~~~~~  104 (404)
T d1qz9a_          26 EGVIYLDGNSLGA-RPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  104 (404)
T ss_dssp             TTCEECCTTTSCC-CBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCCEEcCCccccc-CCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCchHHHHHHh
Confidence            4578887765332 23445565544 21111111 0         11357999999999999999999999999998876


Q ss_pred             HHh------cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868          164 RCV------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (334)
Q Consensus       164 ~~l------~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~  237 (334)
                      ...      ..+++.|++.+-.+..........+.++..++.+.+...+++.++++++ +++++|.+++.+|.||..+|.
T Consensus       105 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~T~lV~i~~v~~~tG~~~pv  183 (404)
T d1qz9a_         105 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAID-QDTAVVMLTHVNYKTGYMHDM  183 (404)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCS-TTEEEEEEESBCTTTCBBCCH
T ss_pred             hhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcC-CCceEEEEecccccccceecH
Confidence            532      3678888888777664433333322232222222223456788888897 799999999999999999999


Q ss_pred             HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~  304 (334)
                      +++.++++. ++++++|.++......-    .+...+..+++.|..|.+..+.-.+|+++.+++..+.
T Consensus       184 ~~i~~~~~~~~~~~~vD~~q~~g~~~~----~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~  247 (404)
T d1qz9a_         184 QALTALSHECGALAIWDLAHSAGAVPV----DLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDL  247 (404)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCC----CHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTT
T ss_pred             HHHhccccccccceeEEeecccccccc----ccccccceEEEEechhhcccCCceEEEEEechhhhhh
Confidence            999999998 99999999987543321    1222344588889999664333346788877666543

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.38  E-value=3.2e-12  Score=120.67  Aligned_cols=175  Identities=15%  Similarity=0.078  Sum_probs=129.8

Q ss_pred             HHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEee---CCCCCCCCHHHH
Q 019868          136 AALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELI  210 (334)
Q Consensus       136 ~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~---~~~~~~~d~~~l  210 (334)
                      ..+.+.+|.+....++..|+.+++..++.+..  .++++|+++.-.|+.+...+...|++++.++   .++++.+|++++
T Consensus       120 ~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l  199 (434)
T d2z67a1         120 ESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDI  199 (434)
T ss_dssp             HHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHH
T ss_pred             HHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHH
Confidence            33455667766666666777777777766553  3789999999999999999999999998886   345578999999


Q ss_pred             HHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCCchh
Q 019868          211 ADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKR  284 (334)
Q Consensus       211 ~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~  284 (334)
                      ++++++    .++.+|++++|++++|.+.+.+++.++++. ++++++|++|+.+.. ............-.+++.|++|.
T Consensus       200 ~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~~D~~~~s~hK~  279 (434)
T d2z67a1         200 ENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKN  279 (434)
T ss_dssp             HHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHH
T ss_pred             HHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCCcceEEEcCccc
Confidence            999863    357788888999999999999999999988 999999999975431 11122222344556889999998


Q ss_pred             hcccccchheeEc-CHHHHHHHHHhcCC
Q 019868          285 AGLAGLRVGYGAF-PLSIIEYLWRAKQP  311 (334)
Q Consensus       285 ~gl~G~R~G~l~~-~~~~i~~l~~~~~~  311 (334)
                      ++.+ ...|++.. ++..++++.+....
T Consensus       280 l~~~-~g~~~~~~~~~~~~~~~~~~~~~  306 (434)
T d2z67a1         280 LLTP-IGGGLVYSTDAEFIKEISLSYPG  306 (434)
T ss_dssp             HCCC-SSCEEEEESCHHHHHHHHTTSCS
T ss_pred             cccC-CCccccccCcHHHHHHHHhhccc
Confidence            8733 34455654 56777777665444

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.38  E-value=6.4e-12  Score=116.23  Aligned_cols=187  Identities=18%  Similarity=0.125  Sum_probs=138.4

Q ss_pred             ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCC-CH
Q 019868          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-NV  207 (334)
Q Consensus       130 g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~-d~  207 (334)
                      ....|++.+++++|..  +.++++++|.|+.++++++ +++||+|++|.-+|......+...|++++.++.+++... +.
T Consensus        22 ~~~~fE~~~~~~~~~~--~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~   99 (374)
T d1o69a_          22 FVNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVD   99 (374)
T ss_dssp             HHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHH
T ss_pred             HHHHHHHHHHHHHCcC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhHHHHhhccceeEecccccccccccc
Confidence            3789999999999965  7889999999999999988 689999999999999998899999999999996544333 33


Q ss_pred             HHH--HHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCC--
Q 019868          208 ELI--ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--  281 (334)
Q Consensus       208 ~~l--~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~--  281 (334)
                      +..  ..... .++++|++.   +..|...+.+++.++++. +++||+|.+++.++. .+......+    .+.+.||  
T Consensus       100 ~~~~~~~~~~-~~~~aii~~---~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~~g----d~~~fSf~~  171 (374)
T d1o69a_         100 LLKLAIKECE-KKPKALILT---HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFG----EFGVYSYNG  171 (374)
T ss_dssp             HHHHHHHHCS-SCCCEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSS----SEEEEECCT
T ss_pred             cccccchhcc-ccccccccc---ccccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecCCCC----ceEEEeccC
Confidence            332  23443 678899954   567899999999999987 999999999987552 222222222    3666677  


Q ss_pred             chhhcccccchheeEc-CHHHHHHHHHhcCC----------------CCCcHHHHHHHHHHhcC
Q 019868          282 SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP----------------YNVSVAAEVAACAALQN  328 (334)
Q Consensus       282 SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~----------------~~~~~~~q~aa~~~L~~  328 (334)
                      +|.++..|  .|.+++ ++++++.++..+..                +.++.+..+++..-|+.
T Consensus       172 ~K~l~tge--GG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~  233 (374)
T d1o69a_         172 NKIITTSG--GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEV  233 (374)
T ss_dssp             TSSSCCSS--CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTT
T ss_pred             cccccccc--ceeehhhhHHHHHhhccccccccccccccccccCCccccccchhhhhhHHHHhh
Confidence            68876333  466666 67888887766432                22566666666666654

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=4.2e-12  Score=120.09  Aligned_cols=178  Identities=13%  Similarity=0.018  Sum_probs=127.5

Q ss_pred             HHHHHHHhcCCCC-CCEEEeCCHHHHHHHH-HHHh---cCCCCEEEEcCCCChhHHHHHHHCCCeEEEee---CCCCCCC
Q 019868          134 LRAALAKDSGLES-DHILVGCGADELIDLI-MRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSL  205 (334)
Q Consensus       134 lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~-~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~---~~~~~~~  205 (334)
                      +.+.+++.+|.+. ...++++|+++....+ +.++   ..+++.|+++...|..+...+..+|++++.|+   .++++.+
T Consensus        99 ~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~~~~~~i  178 (445)
T d3bc8a1          99 LVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRT  178 (445)
T ss_dssp             HHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeeccCccccc
Confidence            3344556678754 4566677766544433 3333   35678999999999999999999999988885   3566899


Q ss_pred             CHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhh-hcCCCcEEEEc
Q 019868          206 NVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEW-VKKHDNLIVLR  279 (334)
Q Consensus       206 d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~-~~~~~~~i~i~  279 (334)
                      |++++++++++   +++.+|++++|+|++|.+-+.+++.++++. ++++++|++|+.+.. ....... ....+-.++..
T Consensus       179 d~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~  258 (445)
T d3bc8a1         179 DLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQ  258 (445)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhccCcCCcceEEe
Confidence            99999998853   357788889999999999999999999998 999999999986431 1111111 11123348888


Q ss_pred             CCchhhcccccchheeEc-CHHHHHHHHHhcCCC
Q 019868          280 TFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY  312 (334)
Q Consensus       280 S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~~  312 (334)
                      |.+|.++.+ ...|+++. +...++.+......+
T Consensus       259 s~hK~~~~p-~g~~~l~~~~~~~~~~~~~~~~~~  291 (445)
T d3bc8a1         259 SLDKNFMVP-VGGAIIAGFNEPFIQDISKMYPGR  291 (445)
T ss_dssp             EHHHHHSCC-SSCEEEEESCHHHHHHHHHHSCSC
T ss_pred             cCccccccC-CCCceeeeCChHHHHHHHHHHhhc
Confidence            999988644 34566666 567777776655443

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.35  E-value=1.8e-11  Score=112.52  Aligned_cols=212  Identities=15%  Similarity=0.136  Sum_probs=153.5

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh--
Q 019868          106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--  181 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~--  181 (334)
                      |.+.+++|++++......++-+..  -..+.|+.++++++.+.+.++++.|++.+++.++..++.+||+|++....+.  
T Consensus         8 P~~v~~~V~~am~~~~~~hr~~~f~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~~G~f~~   87 (348)
T d1iuga_           8 PVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSE   87 (348)
T ss_dssp             SCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHH
T ss_pred             CCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeecchHHHH
Confidence            566789999998763332322222  2567888889999987778899999999999999999999999988876643  


Q ss_pred             hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcC
Q 019868          182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTE  258 (334)
Q Consensus       182 ~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~  258 (334)
                      .+...++.+|.++..+..+.+..+++++    ....+++.+++++..+.||...+.+++.++++.   +.++++|.+.+.
T Consensus        88 ~~~~~a~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss~  163 (348)
T d1iuga_          88 RFYEIALEAGLVVERLDYPYGDTPRPED----VAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSL  163 (348)
T ss_dssp             HHHHHHHHTTCEEEEEECCTTCCCCTTT----SCCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTB
T ss_pred             HHHHHHHhcCcccccccccCCCcccccc----ccccCCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhhcc
Confidence            3456677789888887754444444433    234678999999999999999999999999975   688999998765


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHH----------------hcCCCCCcHHHHHH
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWR----------------AKQPYNVSVAAEVA  321 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~----------------~~~~~~~~~~~q~a  321 (334)
                      ....-.    ++..+-.+++.|-.|.+ |.+|  +|+++++++.++++..                -..+++++....++
T Consensus       164 g~~~i~----~d~~~iD~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~  237 (348)
T d1iuga_         164 LVGEVA----LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLA  237 (348)
T ss_dssp             TTBCCC----SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHH
T ss_pred             cccccc----cccccCCEEEeccccceecCCc--eeeeeechHHHhhhcccccccchhhhhhhhccCcccccccchHHHH
Confidence            432111    22233459999999998 7777  6999999887764321                11235667767666


Q ss_pred             HHHHhc
Q 019868          322 ACAALQ  327 (334)
Q Consensus       322 a~~~L~  327 (334)
                      ..++|+
T Consensus       238 l~~aL~  243 (348)
T d1iuga_         238 VAAVLE  243 (348)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666664

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.35  E-value=2.9e-12  Score=117.44  Aligned_cols=192  Identities=10%  Similarity=-0.026  Sum_probs=136.0

Q ss_pred             CCCCCHHHHHHHhcCcCCCCCC--CcChHHHHHHHHHhcCCCCCC--EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          106 PYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~~--I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      |.+.++.|++++......++-+  ..-.++.|+.+++++++++++  ++++.|+|+++++++..+..+++.+++....+.
T Consensus         8 P~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~~~~~~~~   87 (361)
T d1m32a_           8 PLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAY   87 (361)
T ss_dssp             SCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHH
T ss_pred             CCCCCHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccccceeeehhh
Confidence            6667788988876522212112  224689999999999998775  777889999999999999988887777765543


Q ss_pred             h--HHHHHHHCCCeEEEeeCCCCCCCC--HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCC
Q 019868          182 M--YEFDAAVNGAAVVKVPRKSDFSLN--VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (334)
Q Consensus       182 ~--~~~~~~~~G~~v~~v~~~~~~~~d--~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay  256 (334)
                      .  ........+.....+....+...+  .+....... ++++++.+++.+|-||...+.+++.++++. ++++++|.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~q  166 (361)
T d1m32a_          88 GARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMS  166 (361)
T ss_dssp             HHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred             hhhHHHHhhhhhcccccccccccCCccchhhHHHHHhc-cCccceEEEeeecccccchhhhhhhhhhcccceeeEeeccc
Confidence            2  233344455555555533333333  333334443 689999999999999999999999999988 9999999999


Q ss_pred             cCccCCCCchhhhcCCCcEEEEcCCchhhcc-cccchheeEcCHHHHHH
Q 019868          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEY  304 (334)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl-~G~R~G~l~~~~~~i~~  304 (334)
                      +-....    -.+.+.+.++++.|..|.++. +|  +|+++++++..+.
T Consensus       167 s~G~~~----~d~~~~~~D~~~~s~~K~l~gp~G--~g~l~~~~~~~~~  209 (361)
T d1m32a_         167 SFGGIP----MDIAALHIDYLISSANKCIQGVPG--FAFVIAREQKLAA  209 (361)
T ss_dssp             TTTTSC----CCTTTTTCSEEEEESSSTTCCCSS--EEEEEEEHHHHTT
T ss_pred             ccCccc----ccccccccceEEeeecccccCCCC--ceEEEechhhhhh
Confidence            754321    122345667999999998743 35  7888888776543

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.34  E-value=1e-11  Score=114.89  Aligned_cols=206  Identities=15%  Similarity=0.093  Sum_probs=149.8

Q ss_pred             HHHHHHHhcCcCCCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc-CCC--CEEEEcCCCChhHHHH
Q 019868          111 PEVREALGQLKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-DPG--DKIVDCPPTFTMYEFD  186 (334)
Q Consensus       111 ~~v~~al~~~~~~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~-~~g--d~Vl~~~p~y~~~~~~  186 (334)
                      ++-.+++.+......|. .+...+|++++++++|.+  +++++++++.|+.++++++- .+|  |+|+++.-+|......
T Consensus        12 ~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k--~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t~~a~~~a   89 (371)
T d2fnua1          12 KEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANM   89 (371)
T ss_dssp             HHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHH
T ss_pred             HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHCcC--eEEEEecHHHHHHHHHHHhcccCCCCCeeeccccccccccee
Confidence            33344544422222343 334789999999999965  78889999999999999874 334  5899999999998888


Q ss_pred             HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCC
Q 019868          187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (334)
Q Consensus       187 ~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~  264 (334)
                      +...|++++.++.+.+..++.+++++.+. .++++|++.   +.-|...+.+++.++++. ++++|+|.+++.++. .+.
T Consensus        90 i~~~G~~pv~vDi~~~~~~~~~~~~~~~~-~~t~avi~v---h~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga~~~~~  165 (371)
T d2fnua1          90 LLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSV---DYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK  165 (371)
T ss_dssp             HHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEE---CGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             eeccCcccccccccccccccchhhhhhcc-chhhccccc---cccccccccccccccccccchhhccchhhccCceeccc
Confidence            99999999999977666777788888886 789999965   577999999999999988 999999999987652 222


Q ss_pred             chhhhcCCCcEEEEcCC--chhhcccccchheeEc-CHHHHHHHHHhcCC------------------CCCcHHHHHHHH
Q 019868          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP------------------YNVSVAAEVAAC  323 (334)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~------------------~~~~~~~q~aa~  323 (334)
                      .....  .+  +.+.||  +|.++. |. .|.+++ ++++.+.++..+..                  +.++.+..+++.
T Consensus       166 ~~G~~--g~--~~~~Sf~~~K~l~~-g~-GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl  239 (371)
T d2fnua1         166 KVGGF--AL--ASVFSFHAIKPITT-AE-GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGL  239 (371)
T ss_dssp             ETTSS--SS--EEEEECCTTSSSCC-SS-CEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHH
T ss_pred             cCCcc--cc--cccccccccccccc-cc-ceEEEeechhhhhhcccccccccccccccccccccccccccccchhhhhhh
Confidence            22221  22  444555  898763 33 577776 56888888766532                  235667777777


Q ss_pred             HHhcC
Q 019868          324 AALQN  328 (334)
Q Consensus       324 ~~L~~  328 (334)
                      .-|+.
T Consensus       240 ~qL~~  244 (371)
T d2fnua1         240 SQLKK  244 (371)
T ss_dssp             HHHTT
T ss_pred             hhhhh
Confidence            76665

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.32  E-value=1.2e-11  Score=114.38  Aligned_cols=197  Identities=17%  Similarity=0.180  Sum_probs=148.2

Q ss_pred             CCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCCC-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~~-I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      -|...+++|++|+......++-++.  -..++|+.|+++++++..+ |+++.|++.+++.++..++.+|++|++..-.+.
T Consensus        24 GP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~~~g~~  103 (388)
T d2ch1a1          24 GPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIW  103 (388)
T ss_dssp             SSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHH
T ss_pred             CCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhccccccccccccccc
Confidence            3455689999998764332322222  2578999999999987655 555678999999999999999999988876665


Q ss_pred             hH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868          182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       182 ~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      ..  ...++..+...+.+...++...+.+..+......+++++++++-+|.||...+.+++.++++. +.++++|.+.+-
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~  183 (388)
T d2ch1a1         104 AERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASL  183 (388)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTB
T ss_pred             cccchhhhhhhcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccchhhhcchhccccceeeeeeeecc
Confidence            43  344566888888888666667888888887766789999999999999999999999999987 999999999875


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~  306 (334)
                      ...    .-.+++.+-++++.|-.|.++ +.-.+|+++.+++.++.+.
T Consensus       184 g~~----pid~~~~~~d~~~~s~~K~~~-gp~G~g~~~~~~~~~~~~~  226 (388)
T d2ch1a1         184 CGV----PFYMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIR  226 (388)
T ss_dssp             TTB----CCCTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHH
T ss_pred             ccc----ccchhccCceEEEEccccccC-CCCeEEEEeccHHHHHhhh
Confidence            432    112234556689999999774 2233788888888777654

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.31  E-value=2e-11  Score=112.34  Aligned_cols=198  Identities=16%  Similarity=0.113  Sum_probs=146.2

Q ss_pred             CCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (334)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~  181 (334)
                      -|.+.++.|++++......++-+..  -..+.|+.++++++++. ..|+++.|++.+++.++..++.+|+++++..-.+.
T Consensus        25 GP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~~~~~~  104 (377)
T d1vjoa_          25 GPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYF  104 (377)
T ss_dssp             SCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHH
T ss_pred             CCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccccceeeechh
Confidence            3556679999998764332322222  26789999999999854 46777788999999999999999999988877665


Q ss_pred             h--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868          182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       182 ~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      .  +...+...+.....+....+...+.+..+....+.+++++.+++-+|.||...+.+++.++++. +.++++|.+++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~  184 (377)
T d1vjoa_         105 GNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSL  184 (377)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTT
T ss_pred             hhhhhhhhhhhcccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhh
Confidence            3  3344555777777766555556677777766655788999999999999999999999999988 999999999864


Q ss_pred             ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~  307 (334)
                      ....    -.++..+-.+++.|..|.++ .+-.+|+++..++.++....
T Consensus       185 g~~~----~~~~~~~~d~~~~s~~K~~~-gp~g~~~~~~~~~~~~~~~~  228 (377)
T d1vjoa_         185 GGVP----IFLDAWGVDLAYSCSQKGLG-CSPGASPFTMSSRAIEKLQR  228 (377)
T ss_dssp             TTSC----CCTTTTTCSEEECCSSSTTC-SCSSCEEEEECHHHHHHHHT
T ss_pred             hhhh----hcccccccceeeeccccccc-CCCEEEEecchhhHHhhhhc
Confidence            3221    11234455688999999764 33357788888888876554

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.29  E-value=8.4e-11  Score=111.74  Aligned_cols=203  Identities=13%  Similarity=0.095  Sum_probs=135.5

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 019868           97 IVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~  175 (334)
                      .|||-+-....+..+...+++..  -...| .++...+|++.+|+++|.+  +++++++++.+...++++++++||+|+.
T Consensus        44 ~iDl~sDs~t~am~~~~~aa~~~--GDd~Y~~dpt~~~lE~~~a~l~G~e--~al~~~SGt~An~~a~~~l~~~Gd~Vi~  119 (456)
T d1c7ga_          44 YIDLLTDSGTNAMSDKQWAGMMI--GDEAYAGSENFYHLEKTVKELFGFK--HIVPTHQGRGAENLLSQLAIKPGQYVAG  119 (456)
T ss_dssp             SEECSCSSSCCCEEHHHHHHTTS--CCCCSSSCHHHHHHHHHHHHHHCCS--EEEEESSHHHHHHHHHHHHCCTTEEEEE
T ss_pred             eeEcccCCCcccchHHHHHHHhc--cchhccCCchHHHHHHHHHHHhCCC--eEEECCCHHHHHHHHHHHhcCCCCeEec
Confidence            58885533222223444333321  12457 5667899999999999964  7888999999999999999999999887


Q ss_pred             cCCCChhHHHHHHHCCCeEEEeeC----------CCCCCCCHHHHHHhccc---CCceEEEEeCCCCcc-ccCCcHHHHH
Q 019868          176 CPPTFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLTSPNNPD-GSIINDEDLL  241 (334)
Q Consensus       176 ~~p~y~~~~~~~~~~G~~v~~v~~----------~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPt-G~~~~~~~l~  241 (334)
                      ... |..........|+.++.+..          ..++.+|++++++.+++   .++.++++.+++|+. |.+++.++++
T Consensus       120 ~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~  198 (456)
T d1c7ga_         120 NMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMR  198 (456)
T ss_dssp             SSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             Ccc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHH
Confidence            654 54455555668888876642          23467899999999864   234688888999986 5677888777


Q ss_pred             HHHh---C-CCeEEEccCCcCcc----------CCCCchhhh----cCCCcEEEEcCCchhhcccccchheeEcC-HHHH
Q 019868          242 KILE---M-PILVVLDEAYTEFS----------GLESRMEWV----KKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSII  302 (334)
Q Consensus       242 ~l~~---~-~~~lIvDeay~~~~----------~~~~~~~~~----~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i  302 (334)
                      +|.+   . ++.+++|++.....          +.......+    ..+ -.++..|++|.++.++  .|+++.+ +++.
T Consensus       199 ~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~-ad~~s~s~~K~~~~~~--GG~i~~~~~~l~  275 (456)
T d1c7ga_         199 AVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSY-ADGCTMSGKKDCLVNI--GGFLCMNDEEMF  275 (456)
T ss_dssp             HHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT-CSEEEEETTTTTCCSS--CEEEEESCHHHH
T ss_pred             HHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccc-cccEEEeccccccccc--eeEEEcCCHHHH
Confidence            6655   4 99999999975211          111111111    111 2366679999887443  3777764 5666


Q ss_pred             HHHHH
Q 019868          303 EYLWR  307 (334)
Q Consensus       303 ~~l~~  307 (334)
                      +.++.
T Consensus       276 ~~~r~  280 (456)
T d1c7ga_         276 SAAKE  280 (456)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66553

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.24  E-value=4.8e-11  Score=113.33  Aligned_cols=166  Identities=13%  Similarity=0.131  Sum_probs=111.3

Q ss_pred             CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEee--CCCCC
Q 019868          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVP--RKSDF  203 (334)
Q Consensus       127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~--~~~~~  203 (334)
                      |..-..++++.+|+++|.+ +-+++++|++.++..++.++++|||+|+++..+|......+.. .+..++...  .+..+
T Consensus        64 ~~~~i~eae~~~A~~~ga~-~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g  142 (462)
T d1c4ka2          64 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  142 (462)
T ss_dssp             TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             CCHHHHHHHHHHHHHhCCC-eEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeeccccccc
Confidence            4334789999999999974 3456667778888888888999999999999999887665544 344444432  22211


Q ss_pred             --------CCCHHHHHH---------hcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCC
Q 019868          204 --------SLNVELIAD---------AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (334)
Q Consensus       204 --------~~d~~~l~~---------~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~  264 (334)
                              .++.+.+.+         +.. .++..+++...+|-+|.+.+.+++.++++. ++++++|+++..... .+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~~~  221 (462)
T d1c4ka2         143 FIGGIYDSDFDEKKIRELAAKVDPERAKW-KRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM  221 (462)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTC-SCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred             ccCCCChHHhhHHHHHhhhhhhcHHhhhc-cCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccccccCc
Confidence                    234333333         222 345555555566779999999999999998 999999999975432 111


Q ss_pred             chhh----h----cCCCcEEEEcCCchhhcccccchheeE
Q 019868          265 RMEW----V----KKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (334)
Q Consensus       265 ~~~~----~----~~~~~~i~i~S~SK~~gl~G~R~G~l~  296 (334)
                      ....    .    ...+.++++.|++|++|.++  .|.++
T Consensus       222 ~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll  259 (462)
T d1c4ka2         222 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQI  259 (462)
T ss_dssp             GGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEE
T ss_pred             CCcchhhccccccccCCccEEEEecCccccccc--ceEEE
Confidence            1111    0    01234799999999887443  45554

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.23  E-value=1.8e-10  Score=109.29  Aligned_cols=211  Identities=14%  Similarity=0.049  Sum_probs=148.1

Q ss_pred             HHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcC----CCCCCCcC--hHHHHHHHHHhcCCCCC-----CEEEeC
Q 019868           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDPE--SRRLRAALAKDSGLESD-----HILVGC  153 (334)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~Yp~~g--~~~lr~~lA~~~~~~~~-----~I~~t~  153 (334)
                      +..++-.++.+.++|....+.+ .+|++.+.+.. ++.    ...||...  ..+..+.+|++++.+..     .=.+|+
T Consensus        44 i~d~l~~dg~~~~n~asf~~t~-~~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~  122 (450)
T d1pmma_          44 INDELYLDGNARQNLATFCQTW-DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI  122 (450)
T ss_dssp             HHHHGGGSCCGGGBCSCCSCCC-CCHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEES
T ss_pred             HHHHhccCCCccccccccccCC-CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeC
Confidence            3344433444456676654443 34677776665 221    23355432  34577788888887431     258899


Q ss_pred             CHHHHHHHHHHHhc-----------C-CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCce
Q 019868          154 GADELIDLIMRCVL-----------D-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       154 G~~~~i~~~~~~l~-----------~-~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~  220 (334)
                      |+++++.+.+.+..           . ....++++...|..+...++..|++++.++.+ +++.+|+++++++++ +++.
T Consensus       123 GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~L~~~i~-~~t~  201 (450)
T d1pmma_         123 GSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTI  201 (450)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEE
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHHHHHHhh-hCce
Confidence            99999988776532           1 22457788888999999999999999999964 468999999999997 6888


Q ss_pred             EEEEeCCCCccccCCcHHHHHHHHhC-------CCeEEEccCCcCcc--C-CCCchhhhcCCCcEEEEcCCchhhccccc
Q 019868          221 CIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~l~~~-------~~~lIvDeay~~~~--~-~~~~~~~~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                      +|+.+.+++.||.+-+.+++.++++.       ++++.+|.+|+.+.  + .+..........-..+..|.+|. ++...
T Consensus       202 ~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~-~~~p~  280 (450)
T d1pmma_         202 GVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKF-GLAPL  280 (450)
T ss_dssp             EEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCS
T ss_pred             EEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhc-cCCCC
Confidence            99988999999999999988888642       89999999998764  1 11111112223456788899994 44566


Q ss_pred             chheeEcCH
Q 019868          291 RVGYGAFPL  299 (334)
Q Consensus       291 R~G~l~~~~  299 (334)
                      .+||++..+
T Consensus       281 g~g~l~~r~  289 (450)
T d1pmma_         281 GCGWVIWRD  289 (450)
T ss_dssp             SCEEEEESS
T ss_pred             CeeEEEecC
Confidence            789998854

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.22  E-value=3.7e-11  Score=110.68  Aligned_cols=208  Identities=18%  Similarity=0.135  Sum_probs=147.4

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCCCc----C--h----HH-HHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E--S----RR-LRAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp~~----g--~----~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +-|+|-..||-.  ++.+++++...   .+..+||..    |  .    +. ..+...+++++...+|-..+|+. +...
T Consensus        24 ~~l~LiaSEN~~--S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~anVqp~SGs~-An~a  100 (405)
T d1kl1a_          24 AKIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQ-ANMA  100 (405)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCCSEEECCCSSHHH-HHHH
T ss_pred             cCceEeccCCcC--CHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCcceeeccCchH-HHHH
Confidence            348888888864  58899998762   233334431    2  1    22 22344467788777777777776 5556


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHH-----HHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~  235 (334)
                      ++.+|++|||+|+..++..+.+..     .......+.+.++.+ +++.+|.+++++.++..++|+|++..-.+|  ..+
T Consensus       101 v~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--r~~  178 (405)
T d1kl1a_         101 VYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYP--RII  178 (405)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCC
T ss_pred             HHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHHHHHhhCcceEEecccccc--ccc
Confidence            677799999999999876654322     111234677877754 567899999999998889999998765555  678


Q ss_pred             cHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC
Q 019868          236 NDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (334)
Q Consensus       236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~  312 (334)
                      +-+++++|++. +.+++.|-++. ++...+-....+ .+ -.++..|..|++  .|.|.|.+..+++..+.+.+...+.
T Consensus       179 d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~-aDvvt~tThKtl--rGPrgg~I~~~~~~~~~i~~avfPg  253 (405)
T d1kl1a_         179 DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PY-AHFVTTTTHKTL--RGPRGGMILCQEQFAKQIDKAIFPG  253 (405)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TT-CSEEEEESSSTT--CCCSCEEEEECHHHHHHHHHHHTTT
T ss_pred             ChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hh-hhheeccccccc--cCCCCceEEecchhHHHHHhhhCcc
Confidence            99999999998 99999999984 333222111111 12 248889999986  6999999999999999998887773

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=3.7e-11  Score=111.19  Aligned_cols=207  Identities=17%  Similarity=0.139  Sum_probs=145.1

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCCCc----C------hHHH-HHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E------SRRL-RAALAKDSGLESDHILVGCGADELIDL  161 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp~~----g------~~~l-r~~lA~~~~~~~~~I~~t~G~~~~i~~  161 (334)
                      +-|+|-..||-.  ++.+++++...   .+..+||..    |      .+.+ .+...+++++...+|...+|+. +...
T Consensus        27 ~~i~LiaSEN~~--S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a~~anVqp~SGs~-AN~a  103 (416)
T d1dfoa_          27 EHIELIASENYT--SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQ-ANFA  103 (416)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH-HHHH
T ss_pred             cCceEecCcccC--CHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCCCcceeecccCcc-HHHH
Confidence            348888888754  58899998762   233344431    2      1222 2333456788777777766665 5566


Q ss_pred             HHHHhcCCCCEEEEcCCCChhHHHH-----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868          162 IMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (334)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~  236 (334)
                      ++.++++|||+|+..+..++.+...     +.....+.+.++.+.+..+|.+++++..+..++|+|++..-.+|  ..++
T Consensus       104 v~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~a~~~kPklIi~G~S~y~--r~~d  181 (416)
T d1dfoa_         104 VYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYS--GVVD  181 (416)
T ss_dssp             HHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHHHHHHCCSEEEEECSSCC--SCCC
T ss_pred             HHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHHHHHhccceEEecccccc--cccC
Confidence            6777999999999999888654321     11234567777766667799999999988889999998755544  7889


Q ss_pred             HHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC---HHHHHHHHHhcCC
Q 019868          237 DEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQP  311 (334)
Q Consensus       237 ~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~---~~~i~~l~~~~~~  311 (334)
                      -+++++|++. +.++++|.++. ++...+.....+..  -.++..|.+|+|  .|.|.|.+..+   +++.+.+.+...+
T Consensus       182 ~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~--aDvvt~tThKtl--rGPrggiI~~~~~~~~~~~~i~~avfP  257 (416)
T d1dfoa_         182 WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPH--AHVVTTTTHKTL--AGPRGGLILAKGGSEELYKKLNSAVFP  257 (416)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTT--SSEEEEESSSTT--CCCSCEEEEESSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCceEEcchhhhhcceeccccCCcccc--cceeeeehhhcc--cCCCceEEEeccchHhHHHHHHhhhCc
Confidence            9999999987 99999999984 33321111111111  249999999986  69999999985   6788888777766

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.15  E-value=1.5e-10  Score=109.90  Aligned_cols=197  Identities=13%  Similarity=0.064  Sum_probs=127.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---  171 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd---  171 (334)
                      ..|||-+.....+..+...+++...+  ..| ++++..+|++++++++|.  ++++++++++++...+++.++++|+   
T Consensus        43 ~~id~~sd~~t~~~~~~~~a~~~~gd--~~y~~~~~~~~le~~~a~l~g~--~~~~~~~sGt~A~~~a~~~~~~~g~~~~  118 (465)
T d1ax4a_          43 VYIDLLTDSGTNAMSDHQWAAMITGD--EAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKEG  118 (465)
T ss_dssp             CSEECSCSSSCCCEEHHHHHHHHTCC--CCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeecccccchhhhhHHHHHHHhhhh--hhhccChHHHHHHHHHHHHHCC--CEEEECCCcHHHHHHHHHHHHHHHHhcC
Confidence            35777543222222344444444322  346 566788999999999995  5899999999999999998876543   


Q ss_pred             ----EEEEcCCCChhHHHHHHHCCCeEEEee----------CCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccc-c
Q 019868          172 ----KIVDCPPTFTMYEFDAAVNGAAVVKVP----------RKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDG-S  233 (334)
Q Consensus       172 ----~Vl~~~p~y~~~~~~~~~~G~~v~~v~----------~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG-~  233 (334)
                          .++.....|..+.......|..++.+.          ....+.+|++++++++++   ..+.++++..++|..| .
T Consensus       119 ~~~~~~i~~~~h~~t~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~  198 (465)
T d1ax4a_         119 KAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQ  198 (465)
T ss_dssp             CCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB
T ss_pred             CCCCeEEeccchhhhhHHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCcee
Confidence                345566666667777777899888764          123567899999998863   2345566666676654 5


Q ss_pred             CCcHHHHHHHHhC----CCeEEEccCCcCcc-----------CCCCchh---hhcCCCcEEEEcCCchhhcccccchhee
Q 019868          234 IINDEDLLKILEM----PILVVLDEAYTEFS-----------GLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (334)
Q Consensus       234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~-----------~~~~~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l  295 (334)
                      +++.+.++++.++    |+++|+|+++....           .......   .+.. -..++..|.+|.  +.|++.|++
T Consensus       199 ~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~~s~s~~k~--~~~~~~g~l  275 (465)
T d1ax4a_         199 PVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYK-YADALTMSAKKD--PLLNIGGLV  275 (465)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGG-GCSEEEEETTST--TCCSSCEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhcccccc-ccceeEeecccC--cccccceeE
Confidence            6788877766554    99999999986321           0001110   0111 112555566664  567788999


Q ss_pred             EcCH
Q 019868          296 AFPL  299 (334)
Q Consensus       296 ~~~~  299 (334)
                      +.++
T Consensus       276 ~~~~  279 (465)
T d1ax4a_         276 AIRD  279 (465)
T ss_dssp             EESS
T ss_pred             eecc
Confidence            8864

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.10  E-value=9.2e-10  Score=103.54  Aligned_cols=226  Identities=18%  Similarity=0.119  Sum_probs=144.9

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~  164 (334)
                      ..+++.+||+..+  ...++ ..|++.+++++ ++....+  +..-...+.+.+.+..+ ..+.+++++++++++..+++
T Consensus        48 D~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~~v~f~~sGseA~e~Alk  126 (427)
T d2gsaa_          48 DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLR  126 (427)
T ss_dssp             ETTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCccccchhHHHHHHHHHHhhCC-ccccccccCCcHHHHHHHHH
Confidence            3467889998665  44454 56899999876 4332222  22223456666666654 34689999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCChhHHHHH--------HHCCC------------eEEEeeCCCCCCCCHHHHHHhccc--CCce
Q 019868          165 CVL--DPGDKIVDCPPTFTMYEFDA--------AVNGA------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (334)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~--------~~~G~------------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~  220 (334)
                      ...  ....+|+...-.|......+        ...+.            +...++     .-|++.+++.+++  .+..
T Consensus       127 ~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~~~~ia  201 (427)
T d2gsaa_         127 LMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-----YNDLEAVKALFAENPGEIA  201 (427)
T ss_dssp             HHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-----TTCHHHHHHHHTTSTTTEE
T ss_pred             HHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-----cchHHHHHHHHHhCCCCeE
Confidence            532  23467887777775321111        11111            122222     2378999988874  3455


Q ss_pred             EEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchh
Q 019868          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG  293 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G  293 (334)
                      +|++.-...-.|...+    .+.++++++. ++++|+||++.+|.. +....  ..+- ..++++  ++|.+| .|+-+|
T Consensus       202 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~-g~~~~~~~~gi-~PDi~~--~gK~lg-gG~p~~  276 (427)
T d2gsaa_         202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRI-AYGGVQEKFGV-TPDLTT--LGKIIG-GGLPVG  276 (427)
T ss_dssp             EEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTT-BTTCHHHHTTC-CCSEEE--ECGGGG-TTSCCE
T ss_pred             EEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeecccccccee-cccchHHhcCC-CHHHHh--hhhccC-CCccee
Confidence            6776533444677776    6777778876 999999999988743 22111  1111 223443  789887 688899


Q ss_pred             eeEcCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868          294 YGAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       294 ~l~~~~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~  327 (334)
                      .+++.+++.+.+....     ..|+.++++.+++.+.|+
T Consensus       277 a~~~~~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le  315 (427)
T d2gsaa_         277 AYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE  315 (427)
T ss_dssp             EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             eeeehHHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhH
Confidence            9999999988765422     236789999999888764

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.06  E-value=4.6e-10  Score=104.92  Aligned_cols=206  Identities=16%  Similarity=0.109  Sum_probs=130.4

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhcC---cCCCCCCCc----C------hHHH-HHHHHHhcCCCCC----CEEEeCCHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E------SRRL-RAALAKDSGLESD----HILVGCGADEL  158 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp~~----g------~~~l-r~~lA~~~~~~~~----~I~~t~G~~~~  158 (334)
                      -|+|-..||-.  ++.+++++...   .+..+||..    |      .+.+ ++...++++++..    ||-.-+|+. +
T Consensus        29 ~l~LiaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SGs~-A  105 (463)
T d2a7va1          29 GLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-A  105 (463)
T ss_dssp             SEECCTTCCCC--CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-H
T ss_pred             CeeEeccCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCccccccHH-H
Confidence            48888778754  58899998762   233344421    1      2233 4455667898876    577766665 5


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCChhHHHHH--------HHCCC--eEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (334)
Q Consensus       159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p  227 (334)
                      ...++.+|++|||+|+..++..+.+...-        ...|.  +.+.+..+ +++.+|.+++++..+..++|+|++..-
T Consensus       106 n~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~S  185 (463)
T d2a7va1         106 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  185 (463)
T ss_dssp             HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcCCceEEeccc
Confidence            56677779999999998887776543211        11222  33444433 557899999999998889999998766


Q ss_pred             CCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH------
Q 019868          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------  299 (334)
Q Consensus       228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~------  299 (334)
                      .+|  ..++-+++++|++. +.++++|-++. ++...+-....+..  -.++..|..|+|  .|.|.|.+.+++      
T Consensus       186 ~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~--aDvvt~tTHKTl--rGPrgGiIl~~~~~~~~~  259 (463)
T d2a7va1         186 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--ADIVTTTTHKTL--RGARSGLIFYRKGVKAVD  259 (463)
T ss_dssp             SCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CSCSCEEEEEECSEEEEE
T ss_pred             ccc--cccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhh--hhhhhchhhhhh--cCCCceEEEEcccccccc
Confidence            655  67899999999987 99999999984 34322211111222  248889999986  699999998865      


Q ss_pred             ---------HHHHHHHHhcCC
Q 019868          300 ---------SIIEYLWRAKQP  311 (334)
Q Consensus       300 ---------~~i~~l~~~~~~  311 (334)
                               ++.+.+.+.-.+
T Consensus       260 ~~~~~~~~~~~~~~i~~avFP  280 (463)
T d2a7va1         260 PKTGREIPYTFEDRINFAVFP  280 (463)
T ss_dssp             TTTEEEEECCCHHHHHHHHTT
T ss_pred             cccCccchhHHHHHhhhhcCc
Confidence                     566777776665

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.99  E-value=4.9e-09  Score=98.14  Aligned_cols=207  Identities=16%  Similarity=0.098  Sum_probs=139.8

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCCC------cC-hHH----HHHHHHHhcCCCCC----CEEEeCCHHH
Q 019868           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESD----HILVGCGADE  157 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp~------~g-~~~----lr~~lA~~~~~~~~----~I~~t~G~~~  157 (334)
                      .-|+|-..||-.  ++.+++++...   .+..+||.      .. ..+    ..+...++++.+++    +|-.-+|+ .
T Consensus        32 ~~l~LIaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs-~  108 (470)
T d1rv3a_          32 VGLELIASENFA--SRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-P  108 (470)
T ss_dssp             SSEECCTTCCCC--CHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-H
T ss_pred             cCceEecCCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccccCCc-c
Confidence            348888888754  58899998763   23333332      11 222    22344567787753    44444555 5


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHH----------HHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeC
Q 019868          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFD----------AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (334)
Q Consensus       158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----------~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~  226 (334)
                      +...++.+|++|||+|+..+...+.+...          +.....+.+.++.+ +++.+|.+++++..+..++|+|++..
T Consensus       109 An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~kPklIi~G~  188 (470)
T d1rv3a_         109 ANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGT  188 (470)
T ss_dssp             HHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecccCcccHHHHHHHHHhhCcceEeech
Confidence            66677778999999999887665533221          11123467777744 45789999999998888999999876


Q ss_pred             CCCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-----
Q 019868          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-----  299 (334)
Q Consensus       227 p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-----  299 (334)
                      -.+|  ..++-+++++|++. +.++++|-++. ++...+-...-++..  .++..|..|+|  .|.|.|.+..++     
T Consensus       189 S~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~a--Dvvt~tTHKtl--rGPrgGiI~~~~~~~~~  262 (470)
T d1rv3a_         189 SCYS--RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHC--HVVTTTTHKTL--RGCRAGMIFYRRGVRSV  262 (470)
T ss_dssp             SSCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTC--SEEEEESSGGG--CCCSCEEEEEECSBCC-
T ss_pred             hhcc--ccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhhee--eeeeeehhhhc--cCCcceEEEEccccccc
Confidence            6665  67899999999987 99999999984 333211111112222  49999999986  699999998854     


Q ss_pred             ----------HHHHHHHHhcCC
Q 019868          300 ----------SIIEYLWRAKQP  311 (334)
Q Consensus       300 ----------~~i~~l~~~~~~  311 (334)
                                ++.+.+.+...|
T Consensus       263 ~~~~~~~~~~~~~~~i~~avFP  284 (470)
T d1rv3a_         263 DPKTGKEILYNLESLINSAVFP  284 (470)
T ss_dssp             ------CCBCCHHHHHHHHHTT
T ss_pred             cccccchhHHHHHHHHhhhcCc
Confidence                      366777777665

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=98.99  E-value=4.8e-09  Score=97.26  Aligned_cols=226  Identities=18%  Similarity=0.191  Sum_probs=140.4

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .+++++||+..+  ...++ ..|++.+++.+ +....    .++.....++.+.+.+...-..+.+.++++++++...++
T Consensus        34 ~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Ai  113 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAAL  113 (387)
T ss_dssp             TTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhcccccccCCchHHHHHHHhhhhccccceeeccccCchHHHHHHH
Confidence            467788998653  44565 46888888775 32211    222222334444444444433457999999999999998


Q ss_pred             HHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868          164 RCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (334)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~  228 (334)
                      +...  ....+|+...-.|......+.. .|            ..+..+|.     -|++.+++.+. +++.+|++.-..
T Consensus       114 k~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~-~~iAavi~EPi~  187 (387)
T d1vefa1         114 KFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVD-EETAAVILEPVQ  187 (387)
T ss_dssp             HHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCC-TTEEEEEECSEE
T ss_pred             HHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-----CCHHHHHHhcC-CCeEEEEEECCC
Confidence            8532  2346788888777543322222 22            12344442     27899999997 677777765334


Q ss_pred             CccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868          229 NPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (334)
Q Consensus       229 NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~  301 (334)
                      ...|... +.   ++++++++. |+++|.||++.+|...+...  ...+- ..++++  ++|.++ .|.-++.++..+++
T Consensus       188 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v-~PDi~~--~gK~l~-gG~~~~~~~~~~~~  263 (387)
T d1vefa1         188 GEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDILT--LAKALG-GGVPLGVAVMREEV  263 (387)
T ss_dssp             TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECGGGG-TTSSCEEEEEEHHH
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCc-CCceee--ecccCC-CCccccccccceee
Confidence            4457654 44   445555655 99999999999885433221  11222 223443  899887 67778888888887


Q ss_pred             HHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          302 IEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       302 i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      .+.+....  ..|+.++++.+++.+.|+
T Consensus       264 ~~~~~~~~~g~T~~gnPla~aaa~a~L~  291 (387)
T d1vefa1         264 ARSMPKGGHGTTFGGNPLAMAAGVAAIR  291 (387)
T ss_dssp             HHTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             eeccccCCccccCCCCcchhhhcccchh
Confidence            76554332  236778999988888775

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.1e-08  Score=95.23  Aligned_cols=226  Identities=14%  Similarity=0.083  Sum_probs=144.1

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.+||+..+  ...++ .+|++.+|+.+ ++..    ..|.......+.+.+++..+.  +.++++++++++...+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~sGseA~e~A  114 (404)
T d2byla1          37 DVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY--HKVLPMNTGVEAGETA  114 (404)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcccc--cccccccCccccchhH
Confidence            3467788998765  34444 56889988875 3321    112333355677777777664  6899999999999999


Q ss_pred             HHHhc----------CCCCEEEEcCCCChhHHHHHHHC--------C-----CeEEEeeCCCCCCCCHHHHHHhcccCCc
Q 019868          163 MRCVL----------DPGDKIVDCPPTFTMYEFDAAVN--------G-----AAVVKVPRKSDFSLNVELIADAVEREKP  219 (334)
Q Consensus       163 ~~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~--------G-----~~v~~v~~~~~~~~d~~~l~~~l~~~~~  219 (334)
                      ++...          ....+++...-.|......+...        +     ..+..+|.     -|++++++.+.+++.
T Consensus       115 ik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~l~~~~i  189 (404)
T d2byla1         115 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNV  189 (404)
T ss_dssp             HHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-----TCHHHHHHHHTSTTE
T ss_pred             HHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-----cCHHHHHHhcCCCCe
Confidence            98542          12246666665554322211111        1     12333432     378999999976667


Q ss_pred             eEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhcccc-cc
Q 019868          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAG-LR  291 (334)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G-~R  291 (334)
                      .+|++.-.....|...+    .++++++++. ++++|+||++.+|...+.....  .+-.+ +++  +++|.++ .| +-
T Consensus       190 AaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~P-Di~--~~gK~l~-gG~~p  265 (404)
T d2byla1         190 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRP-DIV--LLGKALS-GGLYP  265 (404)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC-SEE--EECGGGG-TTSSC
T ss_pred             EEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCC-CEE--EECchhh-CCCcc
Confidence            77776533455675554    4555566666 9999999999988643332221  11112 344  6999988 55 78


Q ss_pred             hheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868          292 VGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       292 ~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~  327 (334)
                      +|.+++++++.+.+....  ..|+-++++.+++.+.|+
T Consensus       266 ~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  303 (404)
T d2byla1         266 VSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALE  303 (404)
T ss_dssp             CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             ceeeeechhhhhccCCCCCCcCCCcCHHHHHHHHHHHH
Confidence            999999999887664433  236778999998888775

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=98.86  E-value=6.3e-09  Score=98.60  Aligned_cols=199  Identities=12%  Similarity=0.073  Sum_probs=128.9

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE--
Q 019868           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~--  172 (334)
                      ..|||-+.....+....+.+++...  ...| .++...+|++++++++|.+  .++++++++++...++.+++++||.  
T Consensus        42 ~~idl~sd~~t~~~~~~~~a~~~~g--d~~Y~~~~~~~~le~~~a~l~G~~--~~~~~~sGt~A~~~a~~~~~~~g~~~~  117 (467)
T d2v1pa1          42 VFIDLLTDSGTGAVTQSMQAAMMRG--DEAFSGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_dssp             CSEECSCCTTCSCCCHHHHHHTTSC--CCCSSSCHHHHHHHHHHHHHTCCS--EEEEECSSTTTHHHHHHHHHHHHHHHH
T ss_pred             eeeeccccccchhhHHHHHhhcccc--chhhcCCchHHHHHHHHHHHHCCC--EEEECCCCHHHHHHHHHHHhhccceEe
Confidence            3577755332223334443333321  2457 4567889999999999964  6788888889999999988766553  


Q ss_pred             -------EEEcCCCChhHHHHHHHCCCeEEEeeCCC----------CCCCCHHHHHHhccc---CCceEEEEeCCCCcc-
Q 019868          173 -------IVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVER---EKPKCIFLTSPNNPD-  231 (334)
Q Consensus       173 -------Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~----------~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPt-  231 (334)
                             ++.....|......+...|++++.++.+.          ...+|++++++.+++   +.+.++++.+.+|.. 
T Consensus       118 ~~~~~~~i~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~g  197 (467)
T d2v1pa1         118 GLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAG  197 (467)
T ss_dssp             CCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGG
T ss_pred             cCCCCcEEEEecccccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccc
Confidence                   44455556666677778999999887331          356899999998863   345778877777755 


Q ss_pred             ccCCcHHHHHHHHhC----CCeEEEccCCcCcc----------CCC-Cchhhhc--CCCcEEEEcCCchhhcccccchhe
Q 019868          232 GSIINDEDLLKILEM----PILVVLDEAYTEFS----------GLE-SRMEWVK--KHDNLIVLRTFSKRAGLAGLRVGY  294 (334)
Q Consensus       232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~----------~~~-~~~~~~~--~~~~~i~i~S~SK~~gl~G~R~G~  294 (334)
                      |.+++.+.+++|.++    |+++++|+++....          +.. .......  .....++..|.+|.++  |.+.|+
T Consensus       198 g~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~--~~~gg~  275 (467)
T d2v1pa1         198 GQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAM--VPMGGL  275 (467)
T ss_dssp             CBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTC--CSSCEE
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCC--CCCcee
Confidence            667787777666553    99999999975311          111 1111100  1123367778889764  555677


Q ss_pred             eEcCHH
Q 019868          295 GAFPLS  300 (334)
Q Consensus       295 l~~~~~  300 (334)
                      +..+++
T Consensus       276 i~~~~~  281 (467)
T d2v1pa1         276 LCMKDD  281 (467)
T ss_dssp             EEECSG
T ss_pred             EEecch
Confidence            777554

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=98.79  E-value=2.9e-07  Score=86.11  Aligned_cols=233  Identities=16%  Similarity=0.098  Sum_probs=140.8

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---C-CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~-~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      ..+++.+||+..+  ...++ .+|++.+++.+ ++   + ...++.....+|-+.|.+...-..+.++++++++++...+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~A  116 (431)
T d1zoda1          37 DADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAA  116 (431)
T ss_dssp             CTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHH
T ss_pred             ECCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHH
Confidence            3467789998665  55555 46888888765 22   1 1233444455677777777644457899999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCChhHHHHHHHCC------------CeEEEeeCCCCC---------CCC---HHHHHHhcc-
Q 019868          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNG------------AAVVKVPRKSDF---------SLN---VELIADAVE-  215 (334)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G------------~~v~~v~~~~~~---------~~d---~~~l~~~l~-  215 (334)
                      ++...  ...++|+...-.|......+...+            .....++....+         ..+   ++.++..+. 
T Consensus       117 lk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (431)
T d1zoda1         117 IRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR  196 (431)
T ss_dssp             HHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHH
Confidence            88532  334778777777765443333211            112223211100         011   233332221 


Q ss_pred             --cCCceEEEEeCCCCccccCC-c---HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhc
Q 019868          216 --REKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAG  286 (334)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~-~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g  286 (334)
                        ..++.+|++.-...-.|... +   .++++++++. ++++|.||++.+|...+....  ..+- ..++++  ++|.++
T Consensus       197 ~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv-~PDi~~--~gK~l~  273 (431)
T d1zoda1         197 QSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILT--LSKTLG  273 (431)
T ss_dssp             HCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECHHHH
T ss_pred             hccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCC-Ccchhc--cccccc
Confidence              23456666653333345554 4   4666667776 999999999998764332221  1211 222443  899987


Q ss_pred             ccccchheeEcCHHHHHHHHHhcC----CCCCcHHHHHHHHHHhc
Q 019868          287 LAGLRVGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       287 l~G~R~G~l~~~~~~i~~l~~~~~----~~~~~~~~q~aa~~~L~  327 (334)
                       .|+-+|.+++.+++.+.......    .++.++++.+++.+.|+
T Consensus       274 -gG~p~~av~~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~  317 (431)
T d1zoda1         274 -AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLD  317 (431)
T ss_dssp             -TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             -cccccceeeeeecchhhhhcccccccCCCCCCcchHHHHHHHHH
Confidence             78888888888888877655332    36788888888887765

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=98.74  E-value=2.5e-07  Score=85.88  Aligned_cols=226  Identities=14%  Similarity=0.103  Sum_probs=137.4

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-CCCCCC--c-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYIYPD--P-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~Yp~--~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~  163 (334)
                      .++..+||+..+  ...++ ..|++.+|+++ +.. .+.++.  . ....+.+.+.+..+  .+.+.++.+++++....+
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~sgs~a~~~a~  113 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAY  113 (404)
T ss_dssp             TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCCCcccccchHHHHHHHHhhhhccc--cceeeeeccccchHHHHH
Confidence            356778998765  44455 57899998875 332 111111  1 23344444555555  357888999999999887


Q ss_pred             HHhc----------CCCCEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868          164 RCVL----------DPGDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (334)
Q Consensus       164 ~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~  220 (334)
                      +...          ....+++...-.|.......... +.            .+..+|     .-+.+.++..+..+++.
T Consensus       114 k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~iA  188 (404)
T d1z7da1         114 KLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVP-----YDDLEALEEELKDPNVC  188 (404)
T ss_dssp             HHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEEC-----TTCHHHHHHHHTSTTEE
T ss_pred             HHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccc-----cchHHHHHHHhcCCCEE
Confidence            7432          12246776666665433222211 11            111111     12578888877656677


Q ss_pred             EEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchh
Q 019868          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG  293 (334)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G  293 (334)
                      +|++.-.....|...+    .++++++++. |+++|+||++.+|...+....  ..+- ..+++  +++|.++-.+.-+|
T Consensus       189 avi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv-~PDiv--t~gK~l~gG~~p~~  265 (404)
T d1z7da1         189 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVI--LLGKALSGGHYPIS  265 (404)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCE
T ss_pred             EEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCC-CCCEE--EEcccccCCCCCcc
Confidence            7777644666788776    6777788877 999999999988854332211  1121 22344  69999873337889


Q ss_pred             eeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       294 ~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      .+++++++.+.+.....  .|+.++++.+|+.+.|+
T Consensus       266 ~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  301 (404)
T d1z7da1         266 AVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALN  301 (404)
T ss_dssp             EEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cccchHHHHccCCCCCcCcCCCCCcchhhhhhhhhh
Confidence            99999999876654433  36789999999998875

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.73  E-value=3e-08  Score=94.23  Aligned_cols=166  Identities=14%  Similarity=0.051  Sum_probs=119.8

Q ss_pred             HHHHHHHHhcCCCC---------CCEEEeCCHHHHHHHHHHHhc----------CCC---------CEEEEcCCCChhHH
Q 019868          133 RLRAALAKDSGLES---------DHILVGCGADELIDLIMRCVL----------DPG---------DKIVDCPPTFTMYE  184 (334)
Q Consensus       133 ~lr~~lA~~~~~~~---------~~I~~t~G~~~~i~~~~~~l~----------~~g---------d~Vl~~~p~y~~~~  184 (334)
                      ++-+.+++.+|.+.         ..-++|+|++++....+.+-.          .+|         -.|++++-.|.++.
T Consensus       117 ~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~  196 (476)
T d1js3a_         117 VMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE  196 (476)
T ss_dssp             HHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH
T ss_pred             HHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHH
Confidence            34455666667642         245788888888877765321          111         15788899999999


Q ss_pred             HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868          185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (334)
Q Consensus       185 ~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~  258 (334)
                      ..+...|..++.+|.++++.+|+++|++.+++.     .+-+|+.+..++.||.+=+.+++.+|++. ++|+.+|.+|+.
T Consensus       197 ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg  276 (476)
T d1js3a_         197 RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAG  276 (476)
T ss_dssp             HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGG
T ss_pred             HHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccch
Confidence            999999999999998888999999999998632     23466667889999999999999999998 999999999988


Q ss_pred             ccC-CCCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868          259 FSG-LESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (334)
Q Consensus       259 ~~~-~~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~  299 (334)
                      +.. .......+.. ..-.-+.-+++|.++.| ..+|.++..+
T Consensus       277 ~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P-~~~g~~l~r~  318 (476)
T d1js3a_         277 SAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKR  318 (476)
T ss_dssp             GGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESC
T ss_pred             hhhhhcchhhhhcCCcccceeeecCccccccC-Ccceeecccc
Confidence            652 1222222211 12236667899976544 4567777643

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=6.5e-07  Score=83.68  Aligned_cols=233  Identities=13%  Similarity=0.111  Sum_probs=141.4

Q ss_pred             CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-C----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (334)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~  162 (334)
                      .+++.+||+..|  ...++ .+|++.+++++ +.. .    ..++.....++.+.+.+..+..-+.+.++++++++...+
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e~A  119 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA  119 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcccCCccchHHHHHHHHHHhhhccCcceeeeccccccchhhh
Confidence            356788998766  44555 57999988875 321 1    112333345677777777766667899999999999988


Q ss_pred             HHHhc-------CCCCEEEEcCCCChhHHHHHHH-CC-------------CeEEEeeCC---CC---CCCCHHHHHHhcc
Q 019868          163 MRCVL-------DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRK---SD---FSLNVELIADAVE  215 (334)
Q Consensus       163 ~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~-~G-------------~~v~~v~~~---~~---~~~d~~~l~~~l~  215 (334)
                      ++...       ....+|+...-.|......+.. .|             ......|..   ..   ..-+++.+++.+.
T Consensus       120 ~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (429)
T d1s0aa_         120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA  199 (429)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred             hhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhh
Confidence            87432       2335788887777543322222 11             111222210   11   1123455555443


Q ss_pred             c--CCceEEEEeCC-CCcccc-CCcHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhh
Q 019868          216 R--EKPKCIFLTSP-NNPDGS-IINDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRA  285 (334)
Q Consensus       216 ~--~~~~~i~l~~p-~NPtG~-~~~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~  285 (334)
                      .  +++.+|++.-. .+--|. ..+.+-+++|   ++. ++++|+||++.+|...+.....  .+- ..++++  ++|.+
T Consensus       200 ~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v-~PDi~~--~gK~l  276 (429)
T d1s0aa_         200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILC--LGKAL  276 (429)
T ss_dssp             HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGG
T ss_pred             hcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccccccccee-cccccc--ccccc
Confidence            2  45666666532 354454 4566555555   444 9999999999988643332221  111 222433  79988


Q ss_pred             cccccchheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868          286 GLAGLRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       286 gl~G~R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~  327 (334)
                      +-.+..+|.+++.+++.+.+...       ...|+.++++.+++.+.|+
T Consensus       277 ~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~  325 (429)
T d1s0aa_         277 TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLA  325 (429)
T ss_dssp             GTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             ccccccccchhhHHHHHhccCCCCCcceeecCCCCCCcccchhhhcccc
Confidence            74558999999999999877642       2246788998888888775

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=8.4e-08  Score=89.75  Aligned_cols=233  Identities=12%  Similarity=0.080  Sum_probs=137.8

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC-C--C--CCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY-I--Y--PDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~-~--Y--p~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~  160 (334)
                      ..+++.+||+..+  ...++ .+|++.+++.+ +.... .  +  ......++-+.+.+.+.-+ .+.++++++++++..
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  115 (425)
T d1sffa_          36 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVE  115 (425)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhhhhhcccceeeeeccccchhh
Confidence            3467789998775  55566 67899999876 43211 1  1  1223456777777777533 357999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCChhHHHHH-HHCCC-------------eEEEeeCC----CCCCC----CHHHHHHh-cc
Q 019868          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGA-------------AVVKVPRK----SDFSL----NVELIADA-VE  215 (334)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~G~-------------~v~~v~~~----~~~~~----d~~~l~~~-l~  215 (334)
                      .+++...  ....+|+...-.|......+ ...|.             .....+..    +....    +.+.+... ..
T Consensus       116 ~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (425)
T d1sffa_         116 NAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA  195 (425)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC
T ss_pred             hHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhccc
Confidence            9988532  23367777777776443332 22221             11111211    00000    01111111 11


Q ss_pred             cCCceEEEEeCCCCccccC-CcHHHHHHHH---hC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868          216 REKPKCIFLTSPNNPDGSI-INDEDLLKIL---EM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA  288 (334)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~-~~~~~l~~l~---~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~  288 (334)
                      ..++.+|++.-.....|.. .+.+.+++|.   +. ++++|+||++.+|...+....  ..+- ..+++  +++|.+| .
T Consensus       196 ~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv-~PDi~--~~gK~l~-g  271 (425)
T d1sffa_         196 PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIA-G  271 (425)
T ss_dssp             GGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGG-T
T ss_pred             ccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCC-Cccce--ecccccC-C
Confidence            2345566665334345654 4666665554   44 999999999998654332211  1111 12243  3899997 6


Q ss_pred             ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (334)
Q Consensus       289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~  327 (334)
                      |+.+|.+++++++.+.+.....  .|+.++++.+++.+.|+
T Consensus       272 G~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  312 (425)
T d1sffa_         272 GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLK  312 (425)
T ss_dssp             SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             CcceEEEEEcHHHHHhhCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            8899999999998876543322  37788999999998876

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=98.51  E-value=4.8e-08  Score=88.89  Aligned_cols=175  Identities=13%  Similarity=0.079  Sum_probs=116.8

Q ss_pred             CCCCCCHHHHHHHhc-CcC-----------CCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHH-HHHHHHhcC
Q 019868          105 NPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELI-DLIMRCVLD  168 (334)
Q Consensus       105 ~~~~~~~~v~~al~~-~~~-----------~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i-~~~~~~l~~  168 (334)
                      -|...|++|++++.+ +..           .|+-+..  -..+.|+.|+++++.+.+ .|++++|++.+. ..+...+..
T Consensus        10 GP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~~   89 (361)
T d2c0ra1          10 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLK   89 (361)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCC
T ss_pred             CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhcccc
Confidence            355668999999976 311           1221111  146789999999998544 688877776655 455556678


Q ss_pred             CCCEEEEcCCCC-h-hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          169 PGDKIVDCPPTF-T-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       169 ~gd~Vl~~~p~y-~-~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      +|+++++..-.. . .+...++..|..+..+..+.+...+++.+++.+...  +...   .+|.||...+..++.++++.
T Consensus        90 ~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---v~~~tg~~~~~~~i~~~~~~  164 (361)
T d2c0ra1          90 EGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQD--NAAY---LHLTSNETIEGAQFKAFPDT  164 (361)
T ss_dssp             TTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCT--TEEE---EEEESEETTTTEECSSCCCC
T ss_pred             CCCceEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccC--cceE---EEEecccceecceEEEeecc
Confidence            888887665333 2 345667778999888886555567777777776532  3333   35789999998888887777


Q ss_pred             -CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccccc
Q 019868          247 -PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (334)
Q Consensus       247 -~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~  290 (334)
                       ++++++|.+.+.....-.    +.+.+  +.+.|.+|.++++|.
T Consensus       165 ~~al~~vDavss~g~~~id----~~~~d--i~~~s~~k~~~~~~~  203 (361)
T d2c0ra1         165 GSVPLIGDMSSDILSRPFD----LNQFG--LVYAGAQKNLGPSGV  203 (361)
T ss_dssp             TTSCEEEECTTTTTSSCCC----GGGCS--EEEEETTTTTCCSSC
T ss_pred             CCceEEEEeeccccccccc----cccce--eEEEecccccccccC
Confidence             999999999875332111    12222  556678999887774

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=6.9e-08  Score=87.04  Aligned_cols=175  Identities=13%  Similarity=-0.002  Sum_probs=111.6

Q ss_pred             CCCCCCHHHHHHHhc-CcC-----------CCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHH-hcC
Q 019868          105 NPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRC-VLD  168 (334)
Q Consensus       105 ~~~~~~~~v~~al~~-~~~-----------~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~-l~~  168 (334)
                      -|...|++|++++.+ +..           .++-+..  -..+.|+.|+++++.+.+ .|++++|++++...+... +..
T Consensus         8 GP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a~~~~~~~   87 (360)
T d1bjna_           8 GPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILG   87 (360)
T ss_dssp             SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCT
T ss_pred             CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhhhhhcccc
Confidence            355668999999987 321           1111111  146899999999998644 688888887776666554 456


Q ss_pred             CCCEEEEcCCCChh--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868          169 PGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (334)
Q Consensus       169 ~gd~Vl~~~p~y~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~  246 (334)
                      +++.+++..-.+..  +...++..|..++.+....+...+.+.++..+. .+++++.+++.+|-||...+...+.   +.
T Consensus        88 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~~~t~~~~~~~~i~---~~  163 (360)
T d1bjna_          88 DKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQ-LSDNAAYMHYCPNETIDGIAIDETP---DF  163 (360)
T ss_dssp             TCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCC-CCSSCSCEEECSEETTTTEECCCCC---CC
T ss_pred             cccccceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhc-cCCceeEEEecccccccCcccccee---cc
Confidence            77777777655543  344445567666665533333445555555554 6788888888899999988765432   22


Q ss_pred             --CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc
Q 019868          247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (334)
Q Consensus       247 --~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G  289 (334)
                        ++++++|.+.+....+-.      ..+-.+++.|.+|.+++++
T Consensus       164 ~~~~~v~vDa~~~~~~~~vd------~~~~dv~~~ss~k~~~~~~  202 (360)
T d1bjna_         164 GADVVVAADFSSTILSRPID------VSRYGVIYAGAQKNIGPAG  202 (360)
T ss_dssp             CTTCCEEEECTTTTTSSCCC------GGGCSEEEEETTTTTSSTT
T ss_pred             cccceeeeeeeccccceeee------eccceeEEEEcccccccCC
Confidence              788999987764332211      1122478888999887554

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.22  E-value=8e-07  Score=80.21  Aligned_cols=187  Identities=13%  Similarity=0.042  Sum_probs=113.5

Q ss_pred             eeecCCCCCCCCCCHHHHHHHhc-CcC-----------CCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHH
Q 019868           97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDL  161 (334)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~  161 (334)
                      +.+|+-|  |-..|++|++++.+ +..           .|+-+..  -..+.|+.|+++++++.+ .|++++|++++...
T Consensus         4 ~~nF~pG--P~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~   81 (360)
T d1w23a_           4 VFNFNAG--PSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eeEeCCC--CcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            3445443  44567999999986 311           0111111  146799999999998665 68888888877776


Q ss_pred             HHHHh-cCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          162 IMRCV-LDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       162 ~~~~l-~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      +.... ..+++.+++....+.  .+...+...+..++.+....+...+++.++....  ......   -.|-||...+.+
T Consensus        82 ~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~tg~~~~~~  156 (360)
T d1w23a_          82 MLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQL--NENDAY---LHITSNNTIYGT  156 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCC--CTTEEE---EEEESEETTTTE
T ss_pred             HHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhccc--ccccce---eEecCCccccce
Confidence            55544 467788877665443  3444555577766666533222333344444433  223333   347789999999


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~  297 (334)
                      ++.++++. ++++|+|.+.+-....-.    +.+.+  +.+.+++|..+++| ..|+++.
T Consensus       157 ~i~~~~~~~g~l~ivDavqs~g~~~id----~~~~~--vd~~~~~~~k~~~~-~~~~~~~  209 (360)
T d1w23a_         157 QYQNFPEINHAPLIADMSSDILSRPLK----VNQFG--MIYAGAQKNLGPSG-VTVVIVK  209 (360)
T ss_dssp             ECSSCCCCCSSCEEEECTTTTTSSCCC----GGGCS--EEEEETTTTTSCTT-CEEEEEE
T ss_pred             eeeeccccceeeEEeeccccccccccc----ccccc--ceEEeeccccccCC-cceeeEe
Confidence            99888887 999999999875443211    22333  45556677665544 2344443

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.18  E-value=1.6e-05  Score=74.70  Aligned_cols=230  Identities=11%  Similarity=0.083  Sum_probs=122.3

Q ss_pred             CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-----CCCCCCCcChHHHHHHHHHh----cCCCCCCEEEeCCHHH
Q 019868           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-----FPYIYPDPESRRLRAALAKD----SGLESDHILVGCGADE  157 (334)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-----~~~~Yp~~g~~~lr~~lA~~----~~~~~~~I~~t~G~~~  157 (334)
                      ..+++.+||+..|  ...++ ..|++.+++.+ +.     ....+.......+.+.+++.    .+-.-+.+++++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~~~~~~~v~f~~sGse  128 (461)
T d1ohwa_          49 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  128 (461)
T ss_dssp             BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             ECCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhhccCcceeeeecchhh
Confidence            3467788998654  34444 46889998875 22     11122222222344445543    3444568999999999


Q ss_pred             HHHHHHHHhc----------------------------CCCCEEEEcCCCChhHHHHHH-HCCC-------------eEE
Q 019868          158 LIDLIMRCVL----------------------------DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVV  195 (334)
Q Consensus       158 ~i~~~~~~l~----------------------------~~gd~Vl~~~p~y~~~~~~~~-~~G~-------------~v~  195 (334)
                      ++..+++...                            .+..+|+...-+|......+. ..|-             ...
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999887431                            223478877777764332222 2221             111


Q ss_pred             EeeCCC-CC-----------CCCHHHHHHhcc-----cCCceEEEEeCCCCccccC-CcHHHHHHH---HhC-CCeEEEc
Q 019868          196 KVPRKS-DF-----------SLNVELIADAVE-----REKPKCIFLTSPNNPDGSI-INDEDLLKI---LEM-PILVVLD  253 (334)
Q Consensus       196 ~v~~~~-~~-----------~~d~~~l~~~l~-----~~~~~~i~l~~p~NPtG~~-~~~~~l~~l---~~~-~~~lIvD  253 (334)
                      ..+... ..           ..+.+.+++.+.     ..++.+|++.-.....|.. .+.+.+++|   ++. |+++|+|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~D  288 (461)
T d1ohwa_         209 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  288 (461)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecc
Confidence            111000 00           012344444432     2456677776545555654 465555554   444 9999999


Q ss_pred             cCCcCccCCCCchhh--hc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHH-HHHhcCCCCCcHHHHHHHHHHhc
Q 019868          254 EAYTEFSGLESRMEW--VK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQPYNVSVAAEVAACAALQ  327 (334)
Q Consensus       254 eay~~~~~~~~~~~~--~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~-l~~~~~~~~~~~~~q~aa~~~L~  327 (334)
                      |++..|...+.....  .+ ....+++  +++|.++  |   |+......+... .......|..++++.+++.+.|+
T Consensus       289 EV~tG~gRtG~~~~~e~~gi~~~PDiv--~~gK~l~--~---g~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  359 (461)
T d1ohwa_         289 EVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMM--T---GGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVIN  359 (461)
T ss_dssp             CTTTCSSTTSSSSGGGGGCCSSCCSEE--EECGGGS--S---EEEEECGGGSCSSTTSSCCSCSSCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCchhh--hhhhccc--c---cccccccccccccccccccccccccccchhhcccch
Confidence            999988654432221  11 1112344  5889765  3   444333221110 01122236778888888888775

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=97.91  E-value=2.5e-05  Score=72.46  Aligned_cols=192  Identities=15%  Similarity=0.146  Sum_probs=120.6

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC---cCCCCC-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc-C
Q 019868          100 IDANENPYGPPPEVREALGQL---KFPYIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-D  168 (334)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~---~~~~~Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~-~  168 (334)
                      ++.|......|+.+.+.+.+-   ...+-| |+  .|    ..++.+.|+++.|.+.-+.-.-.|++.....++.+.. .
T Consensus        69 ig~G~~~~~~p~~i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n~s~~~ga~a~~~~~~~~~~~~  148 (437)
T d1wyua1          69 LGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET  148 (437)
T ss_dssp             CCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH
T ss_pred             cCcccCCceeCHHHHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHHHHhhCCCccccCchHHHHHHHHHHHHHHhhh
Confidence            344555555677775544432   121335 32  23    2478888999999887777777888887777666443 3


Q ss_pred             CCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868          169 PGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (334)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  244 (334)
                      ..++++++.-.++.+..    .+...|.+++.++.+++ ..+.++    +. +++.+|++.+||. .|..-+.+++.+++
T Consensus       149 ~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~-~~~~~~----~~-~~~Aavmi~~Pnt-~G~~ed~~~i~~~~  221 (437)
T d1wyua1         149 GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGG-RTPLPE----VG-EEVGAVVVQNPNF-LGALEDLGPFAEAA  221 (437)
T ss_dssp             TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTT-BCCCCC----CC-TTEEEEEEESSCT-TSBCCCHHHHHHHH
T ss_pred             cccccccccccChHHhhhhhhhcccceeeEEeeecccc-cchhhh----hc-cceeEEEEccccc-cccccchHHHHHHh
Confidence            55789999988876543    34568999999996443 222222    33 6789999999965 79998888888888


Q ss_pred             hC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHH
Q 019868          245 EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIE  303 (334)
Q Consensus       245 ~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~  303 (334)
                      +. +.++++|-.-.-+..    ....++.+-+|++++ +|.||.    .|-..|++.+.+++.+
T Consensus       222 h~~G~l~~~~ad~~al~~----l~~Pg~~GaDi~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r  280 (437)
T d1wyua1         222 HGAGALFVAVADPLSLGV----LKPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVR  280 (437)
T ss_dssp             HHTTCEEEEECCTTGGGT----BCCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGG
T ss_pred             hhccceEEeeechhhhhc----cccccccccceEeec-cceeccccCCCcCccccccccchhhc
Confidence            77 776665532211111    111122234477776 666543    3555688887766544

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.001  Score=61.95  Aligned_cols=204  Identities=16%  Similarity=0.144  Sum_probs=126.5

Q ss_pred             CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCC-C---CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIY-P---DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (334)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y-p---~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l  166 (334)
                      .++-++.+...+.  |.+.+.+.. ....+-| |   +.|    ..+++..|+++.|.+-.|.-.-.|++.....++.+.
T Consensus        66 ~~~~lG~~~~hy~--P~v~~~~~~~~TaYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDGatA~aeA~~ma~  143 (471)
T d1wyub1          66 TFYPLGSCTMKYN--PKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIR  143 (471)
T ss_dssp             SCCCBTTTCCCCC--CHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHH
T ss_pred             cccCCccccCccC--cchhhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHH
Confidence            4566666544443  445555543 2222345 4   234    347889999999987666666678876665554433


Q ss_pred             c---CCC----CEEEEcCCCC-hhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868          167 L---DPG----DKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (334)
Q Consensus       167 ~---~~g----d~Vl~~~p~y-~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~  238 (334)
                      .   +.+    ..+++..+.+ ..+.......+.+++.++.+.....|.+.+..... .++.++++.+|++.-+..-..+
T Consensus       144 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~v~v~~p~~~g~~e~~~~  222 (471)
T d1wyub1         144 AYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNPNTLGLFERRIL  222 (471)
T ss_dssp             HHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSSCTTSCCCTTHH
T ss_pred             HHhhhcccccccccccCCcccccceeeeeecccceeecccccccccccchhhhhhhh-ccccceeeccCCCcccccchhh
Confidence            1   222    2334444444 45566666788899998877777889999998876 6788999999998766666688


Q ss_pred             HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHHHH
Q 019868          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYL  305 (334)
Q Consensus       239 ~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~~l  305 (334)
                      ++.++++. +..+++|-+-......-...   ......+++.+..+.||.    .|..+||+.+.+++.+.+
T Consensus       223 ~~~~~~h~~g~~~~~~~~~~~~~~~l~~p---~~~g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~  291 (471)
T d1wyub1         223 EISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYL  291 (471)
T ss_dssp             HHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGC
T ss_pred             hhHHHHHhccccccccccchhhhhhcccc---CcccccccccccccccccccccccccccceeehhhhhccC
Confidence            88888776 66666665433222111111   111223555566666644    366689999988877644