Citrus Sinensis ID: 019907

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSSS
cccccccccHHHHHHHHHHcccccccEEEcccccHHHHHHcccccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHcccc
cccEEEccccHHHHHHHHHcccccEEEEEEEcccHHHHHccccEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHccccccccccccccccccccEEEEEEEEEcccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccc
mswctiesdpgVFTELIQQMQVKgvqveelysldldslnnlrpvyGLIFLfkwrpgekddrvvikdpnpnlffASQVINNACATQAILSILlncpdidigpelsklkeftknfppelkglainnSDAIRAAhnsfarpepfvpeeqkaagkdddvyhfisyipvdgvlyeldglkegpislgpctggqgdmdwLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTEnirrkhnyiPFLFNFLKILAEKKQLKPLIEKakqktssss
mswctiesdpgvFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLaslqsermvdKTSFEALNkslsevnagiegatekilMEEEKFKKwrtenirrkhnYIPFLFNFLKILAEKKQLKPliekakqktssss
MSWCTIESDPGVFTELIQQMQVKGVQVeelysldldslnnlRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSSS
**WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAIN*****************************DDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQ************************************GIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEK******************
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV*IKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS*******************DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYT*ELK**QR***************************************A*E******EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPL************
********DPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPL************
*SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVP******GKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSER****TSFEA***SLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQK*****
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MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query334 2.2.26 [Sep-21-2011]
Q9XSJ0328 Ubiquitin carboxyl-termin yes no 0.925 0.942 0.501 1e-89
Q54N38343 Ubiquitin carboxyl-termin yes no 0.964 0.938 0.507 2e-89
Q9WUP7329 Ubiquitin carboxyl-termin yes no 0.928 0.942 0.507 2e-89
Q9Y5K5329 Ubiquitin carboxyl-termin yes no 0.928 0.942 0.498 2e-89
Q06AT3329 Ubiquitin carboxyl-termin yes no 0.928 0.942 0.504 2e-89
Q9UUB6300 Ubiquitin carboxyl-termin yes no 0.868 0.966 0.437 1e-69
Q09444321 Probable ubiquitin carbox yes no 0.895 0.931 0.411 4e-67
D3ZHS6 727 Ubiquitin carboxyl-termin no no 0.721 0.331 0.473 3e-56
Q92560 729 Ubiquitin carboxyl-termin no no 0.721 0.330 0.473 1e-55
Q99PU7 728 Ubiquitin carboxyl-termin no no 0.721 0.331 0.469 2e-55
>sp|Q9XSJ0|UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus GN=UCHL5 PE=2 SV=1 Back     alignment and function desciption
 Score =  330 bits (845), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 168/335 (50%), Positives = 231/335 (68%), Gaps = 26/335 (7%)

Query: 3   WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
           WC +ESDPGVFTELI+    +G QVEE++SL+ ++   L+PV+GLIFLFKW+PGE+    
Sbjct: 8   WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67

Query: 63  VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
           V++D     +FFA QVINNACATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KG
Sbjct: 68  VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127

Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
           LA++NSD IR  HNSFAR + F   + K A K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMF-EFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186

Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
            LG C       DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+ 
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ- 241

Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
                    L  E M        L+   SEV      A  ++L+EEE  K K+++ ENIR
Sbjct: 242 ---------LAEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIR 286

Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
           RKHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct: 287 RKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 321
Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via ADRM1.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2
>sp|Q54N38|UCHL5_DICDI Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium discoideum GN=uch2 PE=3 SV=1 Back     alignment and function description
>sp|Q9WUP7|UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus GN=Uchl5 PE=2 SV=2 Back     alignment and function description
>sp|Q9Y5K5|UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3 Back     alignment and function description
>sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1 Back     alignment and function description
>sp|Q9UUB6|UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1 Back     alignment and function description
>sp|Q09444|UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4 OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2 Back     alignment and function description
>sp|D3ZHS6|BAP1_RAT Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus GN=Bap1 PE=3 SV=2 Back     alignment and function description
>sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q99PU7|BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
225431633334 PREDICTED: ubiquitin carboxyl-terminal h 0.997 0.997 0.906 1e-180
356576644334 PREDICTED: ubiquitin carboxyl-terminal h 0.994 0.994 0.915 1e-180
356535244334 PREDICTED: ubiquitin carboxyl-terminal h 0.994 0.994 0.906 1e-178
449447631334 PREDICTED: ubiquitin carboxyl-terminal h 0.994 0.994 0.876 1e-173
224140903334 predicted protein [Populus trichocarpa] 0.997 0.997 0.876 1e-168
224080017334 predicted protein [Populus trichocarpa] 0.997 0.997 0.870 1e-167
296088487313 unnamed protein product [Vitis vinifera] 0.934 0.996 0.855 1e-167
255556663335 ubiquitin carboxyl-terminal hydrolase is 0.997 0.994 0.870 1e-166
449527357308 PREDICTED: ubiquitin carboxyl-terminal h 0.916 0.993 0.866 1e-156
115449807331 Os02g0822200 [Oryza sativa Japonica Grou 0.976 0.984 0.763 1e-152
>gi|225431633|ref|XP_002262954.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5 [Vitis vinifera] gi|147766506|emb|CAN60599.1| hypothetical protein VITISV_027729 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/333 (90%), Positives = 323/333 (96%)

Query: 1   MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDD 60
           MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLN+LRPVYGLIFLFKWRPGEKDD
Sbjct: 1   MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNHLRPVYGLIFLFKWRPGEKDD 60

Query: 61  RVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGL 120
           R+VIKDPNPNLFFASQVINNACATQAILSIL+NCPD+DIGPELS LKEFTKNFPPELKGL
Sbjct: 61  RLVIKDPNPNLFFASQVINNACATQAILSILMNCPDVDIGPELSMLKEFTKNFPPELKGL 120

Query: 121 AINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPIS 180
           AINNS+AIR AHNSFARPEPFVPEEQKAAGKDDDVYHFISY+PVDG+LYELDGLKEGPIS
Sbjct: 121 AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYLPVDGILYELDGLKEGPIS 180

Query: 181 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 240
           LG C GGQGD+DW++MVQPVIQERIERYS+SEIRFNLMA+IKNRK++YT ELKE Q++RE
Sbjct: 181 LGQCPGGQGDLDWVRMVQPVIQERIERYSRSEIRFNLMAIIKNRKDIYTGELKELQKRRE 240

Query: 241 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH 300
            IL QLA+LQSERMVD ++ EALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH
Sbjct: 241 HILHQLAALQSERMVDNSNIEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH 300

Query: 301 NYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSS 333
           NYIPFLFNFLKILAEKKQLKPLIEKAKQKT++S
Sbjct: 301 NYIPFLFNFLKILAEKKQLKPLIEKAKQKTNNS 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356576644|ref|XP_003556440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Glycine max] Back     alignment and taxonomy information
>gi|356535244|ref|XP_003536158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Glycine max] Back     alignment and taxonomy information
>gi|449447631|ref|XP_004141571.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224140903|ref|XP_002323817.1| predicted protein [Populus trichocarpa] gi|222866819|gb|EEF03950.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224080017|ref|XP_002305992.1| predicted protein [Populus trichocarpa] gi|222848956|gb|EEE86503.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296088487|emb|CBI37478.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255556663|ref|XP_002519365.1| ubiquitin carboxyl-terminal hydrolase isozyme L5, putative [Ricinus communis] gi|223541432|gb|EEF42982.1| ubiquitin carboxyl-terminal hydrolase isozyme L5, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449527357|ref|XP_004170678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|115449807|ref|NP_001048557.1| Os02g0822200 [Oryza sativa Japonica Group] gi|48716277|dbj|BAD22892.1| putative ubitquitin C-terminal hydrolase [Oryza sativa Japonica Group] gi|48716519|dbj|BAD23124.1| putative ubiquitin C-terminal hydrolase [Oryza sativa Japonica Group] gi|113538088|dbj|BAF10471.1| Os02g0822200 [Oryza sativa Japonica Group] gi|125541669|gb|EAY88064.1| hypothetical protein OsI_09494 [Oryza sativa Indica Group] gi|125584190|gb|EAZ25121.1| hypothetical protein OsJ_08921 [Oryza sativa Japonica Group] gi|215764980|dbj|BAG86677.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
TAIR|locus:2018516330 UCH2 [Arabidopsis thaliana (ta 0.985 0.996 0.776 8.5e-136
TAIR|locus:2171312334 UCH1 [Arabidopsis thaliana (ta 0.973 0.973 0.676 5.1e-122
DICTYBASE|DDB_G0285527343 uch2 "ubiquitin C-terminal hyd 0.961 0.935 0.494 1.8e-78
UNIPROTKB|E1BU61331 UCHL5 "Uncharacterized protein 0.934 0.942 0.489 2.7e-77
UNIPROTKB|E2QWM9329 UCHL5 "Uncharacterized protein 0.931 0.945 0.479 3.4e-77
UNIPROTKB|Q9Y5K5329 UCHL5 "Ubiquitin carboxyl-term 0.931 0.945 0.479 3.4e-77
UNIPROTKB|Q06AT3329 UCHL5 "Ubiquitin carboxyl-term 0.931 0.945 0.482 5.5e-77
MGI|MGI:1914848329 Uchl5 "ubiquitin carboxyl-term 0.931 0.945 0.482 9e-77
UNIPROTKB|Q9XSJ0328 UCHL5 "Ubiquitin carboxyl-term 0.931 0.948 0.489 1.5e-76
ZFIN|ZDB-GENE-040426-2051329 uchl5 "ubiquitin carboxyl-term 0.934 0.948 0.471 6.3e-76
TAIR|locus:2018516 UCH2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
 Identities = 260/335 (77%), Positives = 289/335 (86%)

Query:     1 MSWCTIESDPGVFTELIQQMQVKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDD 60
             MSWCTIESDPGVFTELIQQMQVKGVQV              RPVYGLIFLFKW+ GEKD+
Sbjct:     1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDSDSLNNLRPVYGLIFLFKWQAGEKDE 60

Query:    61 RVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGL 120
             R  I+D   NLFFA+QVINNACATQAIL+ILLN P++DIGPELS LKEFTKNFP +LKGL
Sbjct:    61 RPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFTKNFPSDLKGL 120

Query:   121 AINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPIS 180
             AINNSD+IRAAHNSFARPEPFVPEEQKAA KDDDVYHFISYIPVDGVLYELDGLKEGPIS
Sbjct:   121 AINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYELDGLKEGPIS 180

Query:   181 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 240
             LGPC G Q  ++WLQMVQPVIQERIERYS+SEIRFNL+AVIKNRK++YTAELKE QR+RE
Sbjct:   181 LGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYTAELKELQRQRE 240

Query:   241 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH 300
             ++LQQ     +   VDK+  EA+N  ++EV +GIE A++KI+MEEEKF KWRTENIRRKH
Sbjct:   241 QLLQQ-----ANTCVDKSEAEAVNALIAEVGSGIEAASDKIVMEEEKFMKWRTENIRRKH 295

Query:   301 NYIPFLFNFLKILAEKKQLKPLIEKAK-QKTSSSS 334
             NYIPFLFNFLK+LAEKKQLKPLIEKAK QKT SS+
Sbjct:   296 NYIPFLFNFLKLLAEKKQLKPLIEKAKKQKTESST 330
GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS
GO:0008242 "omega peptidase activity" evidence=IEA
GO:0004843 "ubiquitin-specific protease activity" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0010016 "shoot system morphogenesis" evidence=IGI
GO:0016579 "protein deubiquitination" evidence=RCA;IDA
GO:0048366 "leaf development" evidence=IGI
GO:0048367 "shoot system development" evidence=IGI
GO:0005515 "protein binding" evidence=IPI
GO:0009640 "photomorphogenesis" evidence=RCA
GO:0010388 "cullin deneddylation" evidence=RCA
GO:0016567 "protein ubiquitination" evidence=RCA
GO:0016571 "histone methylation" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2171312 UCH1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285527 uch2 "ubiquitin C-terminal hydrolase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E1BU61 UCHL5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QWM9 UCHL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y5K5 UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme L5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q06AT3 UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme L5" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1914848 Uchl5 "ubiquitin carboxyl-terminal esterase L5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9XSJ0 UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme L5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2051 uchl5 "ubiquitin carboxyl-terminal hydrolase L5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54N38UCHL5_DICDI3, ., 4, ., 1, 9, ., 1, 20.50730.96400.9387yesno
Q9WUP7UCHL5_MOUSE3, ., 4, ., 1, 9, ., 1, 20.50740.92810.9422yesno
Q06AT3UCHL5_PIG3, ., 4, ., 1, 9, ., 1, 20.50440.92810.9422yesno
Q9UUB6UBLH2_SCHPO3, ., 4, ., 1, 9, ., 1, 20.43780.86820.9666yesno
Q9XSJ0UCHL5_BOVIN3, ., 4, ., 1, 9, ., 1, 20.50140.92510.9420yesno
Q9Y5K5UCHL5_HUMAN3, ., 4, ., 1, 9, ., 1, 20.49850.92810.9422yesno
Q09444UBH4_CAEEL3, ., 4, ., 1, 9, ., 1, 20.41190.89520.9314yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.190.921
3rd Layer3.4.19.120.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
cd09617219 cd09617, Peptidase_C12_UCH37_BAP1, Cysteine peptid 1e-132
pfam01088211 pfam01088, Peptidase_C12, Ubiquitin carboxyl-termi 1e-103
cd02255222 cd02255, Peptidase_C12, Cysteine peptidase C12 con 1e-74
cd09616222 cd09616, Peptidase_C12_UCH_L1_L3, Cysteine peptida 1e-39
>gnl|CDD|187738 cd09617, Peptidase_C12_UCH37_BAP1, Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5) and BAP1 Back     alignment and domain information 
 Score =  376 bits (967), Expect = e-132
 Identities = 146/222 (65%), Positives = 175/222 (78%), Gaps = 7/222 (3%)

Query: 3   WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
           WC IESDPGVFTEL+++  VKGVQVEELYSLD DSL  L PVYGLIFLFKW+ GE+D+  
Sbjct: 1   WCEIESDPGVFTELLEEFGVKGVQVEELYSLDADSLEQLPPVYGLIFLFKWQEGEEDEGS 60

Query: 63  VIKD-PNPNLFFASQVINNACATQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELKGL 120
           V+ D    N+FFA+QVI NACATQA+LS+LLNC D +D+G  LS+ KEFTK F PE+KG 
Sbjct: 61  VVDDEIPSNIFFANQVIPNACATQALLSVLLNCSDEVDLGETLSEFKEFTKGFDPEMKGE 120

Query: 121 AINNSDAIRAAHNSFARPEPFVPEEQ--KAAGKDDDVYHFISYIPVDGVLYELDGLKEGP 178
           AI NS+ IR  HNSFARPEPF+ +E+  K A K++D +HFISY+P+ G LYELDGLKEGP
Sbjct: 121 AIGNSEEIRKVHNSFARPEPFLLDEKLNKKATKEEDAFHFISYVPIGGRLYELDGLKEGP 180

Query: 179 ISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
           I  GPC+ G+   DWL+  +PVIQ RI RYS+ EIRFNLMAV
Sbjct: 181 IDHGPCSEGE---DWLEKARPVIQARIARYSEGEIRFNLMAV 219

This ubiquitin C-terminal hydrolase (UCH) family includes UCH37 (also known as UCH-L5) and BRCA1-associated protein-1 (BAP1). They contain a UCH catalytic domain as well as an additional C-terminal extension which plays a role in protein-protein interactions. UCH37 is responsible for ubiquitin (Ub) isopeptidase activity in the 19S proteasome regulatory complex; it disassembles Lys48-linked poly-ubiquitin from the distal end of the chain. It is also associated with the human Ino80 chromatin-remodeling complex (hINO80) in the nucleus and can be activated through transient association of hINO80 with hRpn13 that is bound to the 19S regulatory particle or the proteasome. UCH37 possibly plays a role in oncogenesis; it competes with Smad ubiquitination regulatory factor 2 (Smurf2, ubiquitin ligase) in binding concurrently to Smad7 in order to deubiquitinate the activated type I transforming growth factor beta (TGF-beta) receptor, thus rescuing it from proteasomal degradation. BAP1 binds to the wild-type BRCA1 RING finger domain, localized in the nucleus. In addition to the UCH catalytic domain, BAP1 contains a UCH37-like domain (ULD), binding domains for BRCA1 and BARD1, which form a tumor suppressor heterodimeric complex, and a binding domain for HCFC1, which interacts with histone-modifying complexes during cell division. The full-length human BRCA1 is a ubiquitin ligase. However, BAP1 does not appear to function in the deubiquitination of autoubiquitinated BRCA1. BAP1 exhibits tumor suppressor activity in cancer cells, and gene mutations have been reported in a small number of breast and lung cancer samples. In metastasis of uveal melanoma, the most common primary cancer of the eye, inactivating somatic mutations have been identified in the gene encoding BAP1 on chromosome 3p21.1. These mutations include several that cause premature protein termination as well as affect its UCH domain, thus implicating loss of BAP1 and suggesting that the BAP1 pathway may be a valuable therapeutic target. Length = 219
>gnl|CDD|216294 pfam01088, Peptidase_C12, Ubiquitin carboxyl-terminal hydrolase, family 1 Back     alignment and domain information
>gnl|CDD|187736 cd02255, Peptidase_C12, Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1 Back     alignment and domain information
>gnl|CDD|187737 cd09616, Peptidase_C12_UCH_L1_L3, Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 334
KOG2778328 consensus Ubiquitin C-terminal hydrolase [Posttran 100.0
PF01088214 Peptidase_C12: Ubiquitin carboxyl-terminal hydrola 100.0
KOG1415222 consensus Ubiquitin C-terminal hydrolase UCHL1 [Po 100.0
>KOG2778 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-102  Score=726.45  Aligned_cols=312  Identities=67%  Similarity=1.085  Sum_probs=279.0

Q ss_pred             CccccccCCHHHHHHHHHHcCCCCceEEEeecCChhhhhccCCcceeEEeeecCCCCccccccccCCCCCcccchhhhhh
Q 019907            1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINN   80 (334)
Q Consensus         1 m~W~pLESdP~VFt~l~~~lGv~~~~f~DVyslD~~~L~~~~Pv~alIfLFp~~~~~~~~~~~~~~~~~~v~fakQtI~N   80 (334)
                      |+||+|||||||||+|++.|||+|+||+||||||.+.+..++|||||||||+|.+++++.+....+.-++||||||||+|
T Consensus         1 ~~W~~iESDPGvFTeli~~fgv~gvQVEElysLd~~~~~~~~piyGlIFLFKW~~ed~~~g~v~~D~~~niFFA~QvInN   80 (328)
T KOG2778|consen    1 MSWCLIESDPGVFTELIEGFGVKGVQVEELYSLDSDSLRPLRPIYGLIFLFKWIEEDKPAGSVIDDSVSNIFFAKQVINN   80 (328)
T ss_pred             CCceeeccCCcHHHHHHHhcCCCceeEeeeeccCcchhccCCCceeEEEEEEeccCCCCCcccccccccchhhhhhhccc
Confidence            89999999999999999999999999999999999999999999999999999987666665555555789999999999


Q ss_pred             hhHHHHHHHhhhCCC--CCCCCcchHHHHHHhcCCChhhHHhhhcCCHHHHHHHHhcCCCCCCCccccccCC--CCCCcc
Q 019907           81 ACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG--KDDDVY  156 (334)
Q Consensus        81 ACgT~AlLh~l~N~~--~i~lgs~L~~f~~~t~~~~p~~Rg~~L~ns~~i~~~Hns~A~~g~~~~~~~~~~~--~~~~~~  156 (334)
                      ||||+|||++|+|+.  +|+||++|++||+||++|+|+.||.+|+|++.||.+||||||+.++.+++..+..  .++++|
T Consensus        81 ACATqAlLsvLlN~~~~~idLG~tLs~~K~f~k~f~Pe~KGlal~Nse~Ir~~HNSfARp~~~~~~e~~a~~~~~~dd~y  160 (328)
T KOG2778|consen   81 ACATQALLSVLLNCSHEDIDLGPTLSELKEFTKGFDPELKGLALGNSEEIRCAHNSFARPEPFRPEEVDAATSAKEDDVY  160 (328)
T ss_pred             HHHHHHHHHHHHcCCccccchhhHHHHHHHHhhcCChhhcccccCCcHHHHHHhccccCCCCcchhhhhcccccccccce
Confidence            999999999999985  6999999999999999999999999999999999999999999996654443322  377899


Q ss_pred             eEEEEEeeCCeEEeecCCCCCCcccCCCCCCCCcccHHHHHHHHHHHHHHhccCCCceeEEEEeecCchHHHHHHHHHHH
Q 019907          157 HFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQ  236 (334)
Q Consensus       157 HFIafV~~~G~lyELDGlk~~Pi~~G~~~~~~~~~~~l~~a~~vi~~ri~~~~~~~i~FslmAL~~~~~~~~~~~l~~l~  236 (334)
                      |||+|||++|+||||||+|.|||+||+|..   +++|++.|++||++||++|++|+|||||||||+||+   ..+|..++
T Consensus       161 HFVsyvPI~g~lyELDGLke~PI~lg~~~~---eqeW~d~vrpVIqeRi~~ys~gEIrFNLMAvV~dRk---~a~l~~~~  234 (328)
T KOG2778|consen  161 HFVSYVPINGRLYELDGLKEGPIDLGPCEK---EQEWLDKVRPVIQERIQRYSEGEIRFNLMAVVPDRK---TAELKELQ  234 (328)
T ss_pred             eEEEEEeeCCEEEeccCCccCCcccCCCCc---cHhHHHHHHHHHHHHHhhCCcceeEEEEEEEeccch---HHHHHHHH
Confidence            999999999999999999999999999986   269999999999999999999999999999999998   66777777


Q ss_pred             HHHHHHHHHHhhhhhhhhccccchHHhhhhHHHHHHhHHHHHHHHHHHHHHHhhhHHHHhcccCCcHHHHHHHHHHHHhc
Q 019907          237 RKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEK  316 (334)
Q Consensus       237 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~E~~k~~~~~~En~rRrhny~pfi~~llk~la~~  316 (334)
                      +.++.|++++...             ........+++|+.+++.|..|.+|+.+|+.||+||||||.||+++|+|.||++
T Consensus       235 ~~~e~l~~~l~~~-------------~~~~~~~~q~~ia~~~~~i~~e~~K~~~~k~en~rr~hny~pfl~ellk~lae~  301 (328)
T KOG2778|consen  235 RKREILLQQLQKQ-------------EATEADKEQSEIANLSSHIRPEDEKLKRYKKENIRRKHNYLPFLVELLKILAEE  301 (328)
T ss_pred             HHHHHHHHHHHhh-------------hccchhhhhhhhcccccccCcchhHhhhcchhhhhhhhcccHHHHHHHHHHhhh
Confidence            7777777766421             011112257888889999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhhc
Q 019907          317 KQLKPLIEKAKQKTS  331 (334)
Q Consensus       317 g~L~~l~e~a~~~~~  331 (334)
                      |+|.+++++||.+..
T Consensus       302 ~~L~~~~~kak~~~~  316 (328)
T KOG2778|consen  302 GQLAPLVEKAKPKSM  316 (328)
T ss_pred             cchhhhhhhhcchhh
Confidence            999999999987654

>PF01088 Peptidase_C12: Ubiquitin carboxyl-terminal hydrolase, family 1; InterPro: IPR001578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG1415 consensus Ubiquitin C-terminal hydrolase UCHL1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
3ihr_A328 Crystal Structure Of Uch37 Length = 328 1e-83
3ris_A245 Crystal Structure Of The Catalytic Domain Of Uchl5, 1e-68
3a7s_A228 Catalytic Domain Of Uch37 Length = 228 4e-65
3tb3_A229 Crystal Structure Of The Uch Domain Of Uch-L5 With 2e-64
3rii_A233 Crystal Structure Of The Catalytic Domain Of Uchl5, 2e-63
1xd3_A230 Crystal Structure Of Uchl3-Ubvme Complex Length = 2 6e-14
3irt_A228 Crystal Structure Of The I93m Mutant Of Ubiquitin C 2e-11
2len_A231 Solution Structure Of Uchl1 S18y Variant Length = 2 3e-11
2etl_A228 Crystal Structure Of Ubiquitin Carboxy-terminal Hyd 4e-11
3ifw_A228 Crystal Structure Of The S18y Variant Of Ubiquitin 5e-11
2wdt_A232 Crystal Structure Of Plasmodium Falciparum Uchl3 In 1e-08
>pdb|3IHR|A Chain A, Crystal Structure Of Uch37 Length = 328 Back     alignment and structure 
Iteration: 1

 Score =  306 bits (783), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 161/335 (48%), Positives = 219/335 (65%), Gaps = 26/335 (7%)
Query: 3   WCTIESDPGVFTELIQQMQVKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRV 62
           WC  ESDPGVFTELI+    +G QV              +PV+GLIFLFKW+PGE+    
Sbjct: 8   WCLXESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67
Query: 63  VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
           V++D     +FFA QVINNACATQAI+S+LLNC   D+ +G  LS+ KEF+++F    KG
Sbjct: 68  VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAXKG 127
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
           LA++NSD IR  HNSFAR + F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQXF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
            LG C       DW+  V+PVI++RI++YS+ EIRFNL A++ +RK +Y  ++ E QR  
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLXAIVSDRKXIYEQKIAELQR-- 240
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
                QLA        +    +  N  LS + +  E A  + L+EEE  K K+++ ENIR
Sbjct: 241 -----QLAE-------EPXDTDQGNSXLSAIQS--EVAKNQXLIEEEVQKLKRYKIENIR 286
Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
           RKHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct: 287 RKHNYLPFIXELLKTLAEHQQLIPLVEKAKEKQNA 321
>pdb|3RIS|A Chain A, Crystal Structure Of The Catalytic Domain Of Uchl5, A Proteasome- Associated Human Deubiquitinating Enzyme, Reveals An Unproductive Form Of The Enzyme Length = 245 Back     alignment and structure
>pdb|3A7S|A Chain A, Catalytic Domain Of Uch37 Length = 228 Back     alignment and structure
>pdb|3TB3|A Chain A, Crystal Structure Of The Uch Domain Of Uch-L5 With 6 Residues Deleted Length = 229 Back     alignment and structure
>pdb|3RII|A Chain A, Crystal Structure Of The Catalytic Domain Of Uchl5, A Proteasome- Associated Human Deubiquitinating Enzyme, Reveals An Unproductive Form Of The Enzyme Length = 233 Back     alignment and structure
>pdb|1XD3|A Chain A, Crystal Structure Of Uchl3-Ubvme Complex Length = 230 Back     alignment and structure
>pdb|3IRT|A Chain A, Crystal Structure Of The I93m Mutant Of Ubiquitin Carboxy-Te Hydrolase L1 Length = 228 Back     alignment and structure
>pdb|2LEN|A Chain A, Solution Structure Of Uchl1 S18y Variant Length = 231 Back     alignment and structure
>pdb|2ETL|A Chain A, Crystal Structure Of Ubiquitin Carboxy-terminal Hydrolase L1 (uch-l1) Length = 228 Back     alignment and structure
>pdb|3IFW|A Chain A, Crystal Structure Of The S18y Variant Of Ubiquitin Carboxy T Hydrolase L1 Bound To Ubiquitin Vinylmethylester Length = 228 Back     alignment and structure
>pdb|2WDT|A Chain A, Crystal Structure Of Plasmodium Falciparum Uchl3 In Complex With The Suicide Inhibitor Ubvme Length = 232 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
3ihr_A328 Ubiquitin carboxyl-terminal hydrolase isozyme L5; 1e-113
3rii_A233 Ubiquitin carboxyl-terminal hydrolase isozyme L5; 1e-88
2wdt_A232 Ubiquitin carboxyl-terminal hydrolase L3; hydrolas 2e-82
1cmx_A235 Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase 2e-76
4dm9_A228 Ubiquitin carboxyl-terminal hydrolase isozyme L1; 4e-75
1xd3_A230 Ubiquitin carboxyl-terminal esterase L3; enzyme-li 2e-73
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>3ihr_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; center for eukaryotic structural genomics, UCH37, UCH-L5, ubiquitin hydrolase, proteasome, INO80; 2.95A {Homo sapiens} Length = 328 Back     alignment and structure
 Score =  332 bits (851), Expect = e-113
 Identities = 160/334 (47%), Positives = 226/334 (67%), Gaps = 22/334 (6%)

Query: 3   WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
           WC +ESDPGVFTELI+    +G QVEE++SL+ ++   L+PV+GLIFLFKW+PGE+    
Sbjct: 8   WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67

Query: 63  VIKD-PNPNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
           V++D     +FFA QVINNACATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KG
Sbjct: 68  VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127

Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
           LA++NSD IR  HNSFAR + F  + + +A K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMFEFDTKTSA-KEEDAFHFVSYVPVNGRLYELDGLREGPI 186

Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
            LG C       DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+ 
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQL 242

Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRK 299
                                +  N  LS + + +      I  E +K K+++ ENIRRK
Sbjct: 243 AEEPMDT--------------DQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRK 288

Query: 300 HNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSS 333
           HNY+PF+   LK LAE +QL PL+EKAK+K ++ 
Sbjct: 289 HNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAK 322
>3rii_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; alpha-beta-alpha fold, thiol hydroalse, cysteine protease, deubiquitinating enzyme; 2.00A {Homo sapiens} PDB: 3ris_A 3sqa_A 3tb3_A 3a7s_A Length = 233 Back     alignment and structure
>2wdt_A Ubiquitin carboxyl-terminal hydrolase L3; hydrolase-protein binding complex, enzyme-ligand complex, UB isopeptidase, UCH-L superfamily, cystein proteinase, peptid hydrolase; 2.30A {Plasmodium falciparum} PDB: 2we6_A Length = 232 Back     alignment and structure
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6 Length = 235 Back     alignment and structure
>4dm9_A Ubiquitin carboxyl-terminal hydrolase isozyme L1; ubiquitin hydrolase, ligase, hydrolase, ligase-inhibitor COM; HET: PHQ GME; 2.35A {Homo sapiens} PDB: 3kw5_A 2etl_A* 3irt_A 3kvf_A 3ifw_A Length = 228 Back     alignment and structure
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A* Length = 230 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
3ihr_A328 Ubiquitin carboxyl-terminal hydrolase isozyme L5; 100.0
3rii_A233 Ubiquitin carboxyl-terminal hydrolase isozyme L5; 100.0
1xd3_A230 Ubiquitin carboxyl-terminal esterase L3; enzyme-li 100.0
4dm9_A228 Ubiquitin carboxyl-terminal hydrolase isozyme L1; 100.0
2wdt_A232 Ubiquitin carboxyl-terminal hydrolase L3; hydrolas 100.0
1cmx_A235 Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase 100.0
>3ihr_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; center for eukaryotic structural genomics, UCH37, UCH-L5, UB hydrolase, proteasome, INO80; 2.95A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.3e-102  Score=750.04  Aligned_cols=313  Identities=51%  Similarity=0.920  Sum_probs=254.4

Q ss_pred             CccccccCCHHHHHHHHHHcCCCCceEEEeecCChhhhhccCCcceeEEeeecCCCCcccccccc-CCCCCcccchhhhh
Q 019907            1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIK-DPNPNLFFASQVIN   79 (334)
Q Consensus         1 m~W~pLESdP~VFt~l~~~lGv~~~~f~DVyslD~~~L~~~~Pv~alIfLFp~~~~~~~~~~~~~-~~~~~v~fakQtI~   79 (334)
                      ++||||||||+|||.|+++|||++|+|+||||||+++|++++|||||||||||++..+....... ...++|||+||||+
T Consensus         6 ~~W~pLESnP~Vft~ll~~LGv~~~~f~DVysLD~e~L~~l~Pv~alIfLFp~~~~~e~~~~~~~~~~~~~v~f~kQtI~   85 (328)
T 3ihr_A            6 GEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVIN   85 (328)
T ss_dssp             -CCCCCCCCHHHHHHHHHHHTCBSEEEEECCCCCHHHHHTTCSEEEEEEEEECCSCCCCSSEECCSTTTTTSCCCCCCSG
T ss_pred             CceeeecCCHHHHHHHHHHcCCCceEEEEeccCCHHHHhcccCceEEEEEEecCchhhhcccccccCcccccchHHHhcc
Confidence            46999999999999999999999999999999999999999999999999999875443322222 22357999999999


Q ss_pred             hhhHHHHHHHhhhCCC--CCCCCcchHHHHHHhcCCChhhHHhhhcCCHHHHHHHHhcCCCCCCCccccccCCCCCCcce
Q 019907           80 NACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYH  157 (334)
Q Consensus        80 NACgT~AlLh~l~N~~--~i~lgs~L~~f~~~t~~~~p~~Rg~~L~ns~~i~~~Hns~A~~g~~~~~~~~~~~~~~~~~H  157 (334)
                      ||||||||||+|+|++  .|++||.|++|+++|.+|+|++||.+|+|++.|+.+|||||++|++..+ ++++.+++++||
T Consensus        86 NACGT~ALLh~l~N~~~~~I~~Gs~L~~f~~~t~~l~P~~Rg~~L~ns~~i~~aHns~A~~g~~~~d-t~~~~~d~~~~H  164 (328)
T 3ihr_A           86 NACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFD-TKTSAKEEDAFH  164 (328)
T ss_dssp             GGHHHHHHHHHHHTCCCTTCBCHHHHHHHHHHHTTSCHHHHHHHHHTCHHHHHHHHTTC------------------CEE
T ss_pred             chHHHHHHHHHHHcCCcccCCCCcHHHHHHHHhcCCCHHHHHHHHhcCHHHHHHHHHHhccCCccCC-CCCCCCcCccee
Confidence            9999999999999986  4999999999999999999999999999999999999999999976432 223445667899


Q ss_pred             EEEEEeeCCeEEeecCCCCCCcccCCCCCCCCcccHHHHHHHHHHHHHHhccCCCceeEEEEeecCchHHHHHHHHHHHH
Q 019907          158 FISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQR  237 (334)
Q Consensus       158 FIafV~~~G~lyELDGlk~~Pi~~G~~~~~~~~~~~l~~a~~vi~~ri~~~~~~~i~FslmAL~~~~~~~~~~~l~~l~~  237 (334)
                      ||||||+||+||||||||+|||+||+|++    ++|+++|+++|++||++|++++++|||||||+|++..++++|+.+++
T Consensus       165 FIafV~~dG~LyELDG~k~gPI~hG~~~~----e~~l~~a~~vi~~ri~~y~~~eirFslmAL~~d~~~~~~~~l~~l~~  240 (328)
T 3ihr_A          165 FVSYVPVNGRLYELDGLREGPIDLGACNQ----DDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR  240 (328)
T ss_dssp             EEEEEEETTEEEEEETTSSSCEEEEECBT----TBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHH
T ss_pred             EEEEEeeCCEEEEcCCCCCCCcccCCCCc----hhHHHHHHHHHHHHHHhcCCCCceEEEEEecCChHHHHHHHHHHHHh
Confidence            99999999999999999999999999985    89999999999999999988899999999999999999999998864


Q ss_pred             HHHHHHHHHhhhhhhhhccccchHHhhhhHHHHHHhHHHHHHHHHHHHHHHhhhHHHHhcccCCcHHHHHHHHHHHHhcC
Q 019907          238 KRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKK  317 (334)
Q Consensus       238 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~E~~k~~~~~~En~rRrhny~pfi~~llk~la~~g  317 (334)
                      .+.      ..        ....+.....+.+++.+|..+++.|++|++||++|+.||+||||||+|||+++||.||++|
T Consensus       241 ~~~------~~--------~~~~~~~~~~~~~~~~ei~~~~~~l~~E~~kr~~w~~En~rRrhny~pfi~~llk~la~~~  306 (328)
T 3ihr_A          241 QLA------EE--------PMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQ  306 (328)
T ss_dssp             HHH------HS--------CCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHGGGSSST
T ss_pred             hhh------cc--------cccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHhcc
Confidence            211      00        0011122345677899999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHhhcc
Q 019907          318 QLKPLIEKAKQKTSS  332 (334)
Q Consensus       318 ~L~~l~e~a~~~~~~  332 (334)
                      +|.+||++||+|+++
T Consensus       307 ~l~~~~e~ak~~~~~  321 (328)
T 3ihr_A          307 QLIPLVEKAKEKQNA  321 (328)
T ss_dssp             TTTTC----------
T ss_pred             cHHHHHHHHHHHHHH
Confidence            999999999988764
>3rii_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; alpha-beta-alpha fold, thiol hydroalse, cysteine protease, deubiquitinating enzyme; 2.00A {Homo sapiens} SCOP: d.3.1.0 PDB: 3ris_A 3sqa_A 3tb3_A 3a7s_A Back     alignment and structure
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A* Back     alignment and structure
>4dm9_A Ubiquitin carboxyl-terminal hydrolase isozyme L1; ubiquitin hydrolase, ligase, hydrolase, ligase-inhibitor COM; HET: PHQ GME; 2.35A {Homo sapiens} PDB: 3kw5_A 2etl_A* 3irt_A 3kvf_A 3ifw_A 2len_A Back     alignment and structure
>2wdt_A Ubiquitin carboxyl-terminal hydrolase L3; hydrolase-protein binding complex, enzyme-ligand complex, UB isopeptidase, UCH-L superfamily, cystein proteinase, peptid hydrolase; 2.30A {Plasmodium falciparum} PDB: 2we6_A Back     alignment and structure
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 334
d2etla1223 d.3.1.6 (A:1-223) Ubiquitin carboxyl-terminal hydr 8e-83
d1xd3a_229 d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase 9e-81
d1cmxa_229 d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase 3e-66
>d2etla1 d.3.1.6 (A:1-223) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Ubiquitin carboxyl-terminal hydrolase UCH-L
domain: Ubiquitin carboxyl-terminal hydrolase isozyme l1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  248 bits (634), Expect = 8e-83
 Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 23/233 (9%)

Query: 1   MSWCTIESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPG-- 56
           M    +E +P +  +++ ++ V G  +  ++  L+ +SL ++  P   L+ LF       
Sbjct: 1   MQLKPMEINPEMLNKVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHE 60

Query: 57  ----EKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
               ++ + +  ++ +P ++F  Q I N+C T  ++  + N  D    + G  L +    
Sbjct: 61  NFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSE 120

Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLY 169
           T+   PE +      ++AI+AAH++ A+      +       D   +HFI +  VDG LY
Sbjct: 121 TEKMSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVD-------DKVNFHFILFNNVDGHLY 173

Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
           ELDG    P++ G  +        L+    V +E  E   + E+RF+ +A+ K
Sbjct: 174 ELDGRMPFPVNHGASSED----TLLKDAAKVCREFTE-REQGEVRFSAVALCK 221
>d1xd3a_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Human (Homo sapiens) [TaxId: 9606]} Length = 229 Back     information, alignment and structure
>d1cmxa_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 229 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
d1xd3a_229 Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Huma 100.0
d2etla1223 Ubiquitin carboxyl-terminal hydrolase isozyme l1 { 100.0
d1cmxa_229 Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Synt 100.0
>d1xd3a_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Ubiquitin carboxyl-terminal hydrolase UCH-L
domain: Ubiquitin carboxyl-terminal hydrolase UCH-l3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-78  Score=558.43  Aligned_cols=213  Identities=30%  Similarity=0.468  Sum_probs=191.9

Q ss_pred             ccccccCCHHHHHHHHHHcCCC-CceEEEeecCChhhhhcc-CCcceeEEeeecCCCCcccc--------ccccCCCCCc
Q 019907            2 SWCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR--------VVIKDPNPNL   71 (334)
Q Consensus         2 ~W~pLESdP~VFt~l~~~lGv~-~~~f~DVyslD~~~L~~~-~Pv~alIfLFp~~~~~~~~~--------~~~~~~~~~v   71 (334)
                      +||||||||+|||+|+++|||+ +++|+||||||+++|+++ +|||||||||||++..+..+        ...++.+++|
T Consensus         4 ~W~pLESnP~vft~~~~~lGv~~~~~f~Dvysld~d~L~~ip~Pv~avI~Lfp~~~~~e~~~~~~~~~~~~~~~~~~~~v   83 (229)
T d1xd3a_           4 RWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSV   83 (229)
T ss_dssp             BCCCCBCCHHHHHHHHHHTTBCTTEEEEECCCSSHHHHTTSCSCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCTTC
T ss_pred             eeeeecCCHHHHHHHHHHhCCCCCCEEEEeccCCHHHHhhcCCCcEEEEEEEECCchhhhhhcccccccccccCCCCccc
Confidence            5999999999999999999997 899999999999999999 99999999999997432211        1123345689


Q ss_pred             ccchhhhhhhhHHHHHHHhhhCCCC---CCCCcchHHHHHHhcCCChhhHHhhhcCCHHHHHHHHhcCCCCCCCcccccc
Q 019907           72 FFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKA  148 (334)
Q Consensus        72 ~fakQtI~NACgT~AlLh~l~N~~~---i~lgs~L~~f~~~t~~~~p~~Rg~~L~ns~~i~~~Hns~A~~g~~~~~~~~~  148 (334)
                      ||+||||+||||||||||+|+|+++   |.+||.|++|+++|++|+|++||++|+|++.|+.+||+||++|++..    +
T Consensus        84 ~f~kQti~NACgT~Allh~l~N~~~~~~i~~gs~L~~f~~~t~~~~p~eRg~~l~~~~~l~~aH~s~A~~g~t~~----p  159 (229)
T d1xd3a_          84 YFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEA----P  159 (229)
T ss_dssp             CCCCCCSBTCHHHHHHHHHHHTTGGGCCBCTTCHHHHHHHHHTTSCHHHHHHHHHTCHHHHHHHHHHHTCSSSCC----C
T ss_pred             eehhhhhhhhhHHHHHHHHHhcCccccccCCcHHHHHHHHHcCCCCHHHHHHHhhcCHHHHHHHHHhccccCCCC----C
Confidence            9999999999999999999999976   78899999999999999999999999999999999999999998642    2


Q ss_pred             CCCCCCcceEEEEEeeCCeEEeecCCCCCCcccCCCCCCCCcccHHHHHHHHHHHHHHhccCCCceeEEEEeecC
Q 019907          149 AGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKN  223 (334)
Q Consensus       149 ~~~~~~~~HFIafV~~~G~lyELDGlk~~Pi~~G~~~~~~~~~~~l~~a~~vi~~ri~~~~~~~i~FslmAL~~~  223 (334)
                      +.+++++||||||||+||+||||||||+|||+||++++    ++|+.+|+++||+||+++ +++++||||||++.
T Consensus       160 ~~~~~~~~HFI~fV~~~G~lyELDG~k~~Pi~hG~~~~----~~~l~~a~~vi~~~~~~~-~~~~~FsllAl~~s  229 (229)
T d1xd3a_         160 SIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETSD----ETLLEDAIEVCKKFMERD-PDELRFNAIALSAA  229 (229)
T ss_dssp             CTTSCCCEEEEEEEEETTEEEEECTTSSSCEEEEECCT----TTHHHHHHHHHHHHHHHS-TTCCCCEEEEEEEC
T ss_pred             CcccccceeEEEEEeeCCEEEEccCCCCCCcccCCCCc----hhHHHHHHHHHHHHHHhC-CCceEEEEEEEecC
Confidence            33456679999999999999999999999999999987    789999999999999996 78999999999973
>d2etla1 d.3.1.6 (A:1-223) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cmxa_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Synthetic, based on Saccharomyces cerevisiae sequence} Back     information, alignment and structure