Citrus Sinensis ID: 020068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
Protein Sequence
MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHccccc
Coil and Loop (DISEMBL)
menhgsgfRRVLLLAFCVAGIWSAYIYQGILQEtlstkrfgpdgkrfQHLAFLNLAQNVVCLIWSYIMLKLwsssaggapwwtywsagitntigpamGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISklahpnaplgyglCFLNlafdgftnatqdsitarypktsawDIMLGMNLWGTIYNLFYmfgwphgsgfeAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTIsrfgsltnttitttRKFVSIVVSSVlsgnplsskqwGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM
Flexible Loop (DISEMBL)
MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLsgnplsskqWGCVLMVFSGLSYQIYLKWRklqrlqkkrkpm
Low Complexity Region (SEG)
MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYlkwrklqrlqkkrkPM
Disordered region (IsUnstruct)
*******FRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQ*********
Disordered Region (DISOPRED)
*************LAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA****************APLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ******************
Disordered Region (DISEMBL)
MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKL**********
Disordered Region (DISPRO)
*****SGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTS********HPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	331	2.2.26 [Sep-21-2011]
Q9M9S6	331	UDP-galactose/UDP-glucose	yes	no	0.993	0.993	0.906	1e-173
O64503	332	UDP-galactose/UDP-glucose	no	no	0.993	0.990	0.857	1e-163
Q54I86	392	Solute carrier family 35	yes	no	0.942	0.795	0.346	2e-48
Q6C4X5	365	UDP-galactose transporter	yes	no	0.963	0.873	0.298	1e-39
P97858	322	Solute carrier family 35	yes	no	0.876	0.900	0.334	2e-38
P78383	322	Solute carrier family 35	yes	no	0.879	0.903	0.351	2e-36
Q6V7K3	322	Solute carrier family 35	yes	no	0.873	0.897	0.339	2e-36
Q8AWB6	325	Solute carrier family 35	yes	no	0.864	0.88	0.355	4e-36
Q8TB61	432	Adenosine 3'-phospho 5'-p	no	no	0.930	0.712	0.346	9e-36
Q8MII5	322	Solute carrier family 35	no	no	0.867	0.891	0.344	9e-36

>sp|Q9M9S6|UTR3_ARATH UDP-galactose/UDP-glucose transporter 3 OS=Arabidopsis thaliana GN=UTR3 PE=1 SV=1

 Score =  607 bits (1564), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/330 (90%), Positives = 317/330 (96%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME+HGSG RRVLLL+FCVAGIW+AYIYQGILQETLSTK+FG DGKRF+HLAFLNLAQNV+
Sbjct: 1   MESHGSGLRRVLLLSFCVAGIWAAYIYQGILQETLSTKKFGEDGKRFEHLAFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WSYIM+KLWS+  +GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYTLPEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSITARYPKT+AWDIMLGMNLWGTIYN+ YMFG PHGSGFEA+QFCKQH
Sbjct: 181 LAFDGFTNATQDSITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct: 241 PEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GLSYQIYLKWRKLQR+QKK+K
Sbjct: 301 WGCVSMVFGGLSYQIYLKWRKLQRMQKKKK 330

Essential sugar transporter required for the transport of UDP-glucose from the cytoplasm into the Golgi and the endoplasmic reticulum. Essential for pollen development and involved in embryo sac progress.
Arabidopsis thaliana (taxid: 3702)

>sp|O64503|UTR1_ARATH UDP-galactose/UDP-glucose transporter 1 OS=Arabidopsis thaliana GN=UTR1 PE=1 SV=1

 Score =  575 bits (1482), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/330 (85%), Positives = 306/330 (92%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HGSGFRR+LLLA C++GIWSAYIYQG+LQETLSTKRFGPD KRF+HLAFLNLAQ+VV
Sbjct: 1   MEVHGSGFRRILLLALCISGIWSAYIYQGVLQETLSTKRFGPDEKRFEHLAFLNLAQSVV 60

Query: 61  CLIWSYIMLKLWSSSA-GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CLIWSYIM+KLWS++  GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLIWSYIMIKLWSNAGNGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMGTLVYGIRYT PEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGY LC LN
Sbjct: 121 PVMLMGTLVYGIRYTFPEYMCTFLVAGGVSIFALLKTSSKTISKLAHPNAPLGYALCSLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSI +RYPKT AWDIMLGMNLWGTIYN+ YMFG P G GF+AIQFCK H
Sbjct: 181 LAFDGFTNATQDSIASRYPKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFKAIQFCKLH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YC+CGAVGQNFIF+TIS FGSL NTTITTTRKFVSIVVSSV+SGNPLS KQ
Sbjct: 241 PEAAWDILKYCICGAVGQNFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GL+YQIYLKW+KLQR++KK++
Sbjct: 301 WGCVSMVFGGLAYQIYLKWKKLQRVEKKKQ 330

Essential sugar transporter required for the transport of UDP-galactose and UDP-glucose from the cytoplasm into the Golgi and the endoplasmic reticulum, to ensure quality control of protein folding. Essential for pollen development and involved in embryo sac progress.

Arabidopsis thaliana (taxid: 3702)

>sp|Q54I86|S35B1_DICDI Solute carrier family 35 member B1 OS=Dictyostelium discoideum GN=slc35b1 PE=3 SV=2

 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 172/315 (54%), Gaps = 3/315 (0%)

Query: 9   RRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIM 68
           +  L   FCV GI+  Y+  G++QE L+  +FG + K F   AFL   Q    ++ ++++
Sbjct: 55  KEELFFIFCVGGIYIFYLLYGLVQEQLNVTKFGTEKKVFGFTAFLLALQCFFNMVSAWLV 114

Query: 69  LKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
             +        P+  Y    +   I   +  ++++YISYP QVLAKS K IPV+ MG L+
Sbjct: 115 SLVNKEQKDNTPFMKYGFVSMLLVISTFLSNQSIRYISYPTQVLAKSCKPIPVIFMGLLL 174

Query: 129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNA 188
           +  +Y   +YI  ++++ G+S F L K +SK   +    +   G  + F++L  DG    
Sbjct: 175 FKKKYPFLKYIVVIVISLGISLFMLPKATSKKNIQFEGHDHLFGNFILFVSLMMDGVMGP 234

Query: 189 TQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFF 248
            QD++  +Y K SA  +ML  N+W     LF +  +  G   +AI F  ++PE    I  
Sbjct: 235 FQDNLVRQY-KPSATSMMLNTNIWN--LGLFSIMAFARGEVSQAIDFILEYPEVIKLILA 291

Query: 249 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFS 308
           +C+  A+GQ FIFLT ++FGSL  +TITTTRKF SI+VS    G+ L + QW  + MVF 
Sbjct: 292 FCITSAIGQQFIFLTTNKFGSLNCSTITTTRKFFSILVSIFYFGHSLDNLQWAAICMVFG 351

Query: 309 GLSYQIYLKWRKLQR 323
           GL   +Y+ +   ++
Sbjct: 352 GLILDLYISYSNKKK 366

Probable sugar transporter.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6C4X5|HUT1_YARLI UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 166/332 (50%), Gaps = 13/332 (3%)

Query: 2   ENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVC 61
           E   S    ++ L  CV+GI+++++   +LQE ++T  +GPD K F+    +N  Q+ + 
Sbjct: 33  ETTKSTKGHIIDLIICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVINTVQSFLA 92

Query: 62  LI--WSYIMLKLWSSSAGGAPWWT-----------YWSAGITNTIGPAMGIEALKYISYP 108
               ++Y+  K    +A G    T                ++ ++   +   ALKY+ Y 
Sbjct: 93  AAVGYAYLQYKQSRRAAKGLKKNTTVFDSMYTLKQLSLVALSQSLASPLSYTALKYVDYL 152

Query: 109 AQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPN 168
             +LAKS K+IP+M +   +Y  ++   +Y   +LV  GVS F +   + K  S     +
Sbjct: 153 TSILAKSCKLIPLMALQVTLYRRKFPAYKYAVVVLVTIGVSMFTIFHAAPKKASGAGSEH 212

Query: 169 APLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGS 228
              G GL  +++  DG TN+TQD I  +    +   +M G+NL   ++    +  +    
Sbjct: 213 QLYGLGLLGISMLLDGLTNSTQDQIFRKNADITGPHVMCGLNLLTGVFTTVSLLTFSRPQ 272

Query: 229 GFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSS 288
              AI F + HPE   DI  + LCGAVGQ FIF T+ +FGS+   T+  TRK  S+++S 
Sbjct: 273 LDTAIAFIRLHPEIMRDIVLFGLCGAVGQVFIFQTLEKFGSVVLVTVNVTRKMFSMLLSV 332

Query: 289 VLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRK 320
           V   + L+  QW  V  VF G+ ++ ++K +K
Sbjct: 333 VWFNHRLTLGQWAGVAAVFGGIGFEAWMKMKK 364

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|P97858|S35B1_MOUSE Solute carrier family 35 member B1 OS=Mus musculus GN=Slc35b1 PE=2 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 15/305 (4%)

Query: 12  LLLAFCVAGIWSAYIYQGILQETLSTKRFG--PDGKRFQHLAFLNLAQNVVCLIWSYIML 69
           L L  C  G++  Y Y GILQE ++  ++G  P  + F     L   Q V+  +++ I++
Sbjct: 12  LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGPKQETFTFALTLVFIQCVINAMFAKILI 71

Query: 70  KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
           + + ++       W Y +  ++          AL++++YP QVL KS K IPVML+G  +
Sbjct: 72  QFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query: 129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNA 188
              +Y L +Y+C LL+  GV   AL     K +  +       G  L  ++L  DG T  
Sbjct: 132 LKKKYPLAKYLCVLLIVAGV---ALFMYKPKKVVGIEEHTVGFGELLLLMSLTLDGLTGV 188

Query: 189 TQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWP---HGSGFEAIQFCKQHPEAAWD 245
           +QD + A Y +T +  +ML +NLW T     ++ G      G  +E + F +++P   ++
Sbjct: 189 SQDHMRAHY-QTGSNHMMLNINLWST-----FLLGAGILFTGELWEFLSFAERYPTIIYN 242

Query: 246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLM 305
           I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+SS QW   ++
Sbjct: 243 ILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTVL 302

Query: 306 VFSGL 310
           VF GL
Sbjct: 303 VFLGL 307

Probable sugar transporter.

Mus musculus (taxid: 10090)

>sp|P78383|S35B1_HUMAN Solute carrier family 35 member B1 OS=Homo sapiens GN=SLC35B1 PE=2 SV=1

 Score =  153 bits (387), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 13/304 (4%)

Query: 12  LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKR--FQHLAFLNLAQNVVCLIWSYIML 69
           L L  C  G++  Y Y GILQE ++  ++G   K+  F     L   Q V+  +++ I++
Sbjct: 12  LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILI 71

Query: 70  KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
           + + ++       W Y +  I+          AL++++YP QVL KS K IPVML+G  +
Sbjct: 72  QFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query: 129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
              +Y L +Y+C LL+  GV+ F  M    K +    H    +GYG  L  L+L  DG T
Sbjct: 132 LKKKYPLAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---VGYGELLLLLSLTLDGLT 186

Query: 187 NATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDI 246
             +QD + A Y +T +  +ML +NLW T+  L  M     G  +E + F +++P   ++I
Sbjct: 187 GVSQDHMRAHY-QTGSNHMMLNINLWSTL--LLGMGILFTGELWEFLSFAERYPAIIYNI 243

Query: 247 FFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMV 306
             + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S  QW   ++V
Sbjct: 244 LLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLV 303

Query: 307 FSGL 310
           F GL
Sbjct: 304 FLGL 307

Probable sugar transporter.

Homo sapiens (taxid: 9606)

>sp|Q6V7K3|S35B1_RAT Solute carrier family 35 member B1 OS=Rattus norvegicus GN=Slc35b1 PE=2 SV=1

 Score =  153 bits (386), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 17/306 (5%)

Query: 12  LLLAFCVAGIWSAYIYQGILQETLSTKRFG--PDGKRFQHLAFLNLAQNVVCLIWSYIML 69
           L L  C  G++  Y Y GILQE ++  ++G  P  + F     L   Q V+  +++ I++
Sbjct: 12  LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGPKQETFTFALTLVFIQCVINAMFAKILI 71

Query: 70  KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
           + + ++       W Y +  ++          AL++++YP QVL KS K IPVML+G  +
Sbjct: 72  QFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query: 129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNA 188
              +Y L +Y+C LL+  GV   AL     K +  +       G  L  L+L  DG T  
Sbjct: 132 LKKKYPLAKYLCVLLIVAGV---ALFMYKPKKVVGIEEHTVGFGELLLLLSLTLDGLTGV 188

Query: 189 TQDSITARYPKTSAWDIMLGMNLWGTIY----NLFYMFGWPHGSGFEAIQFCKQHPEAAW 244
           +QD + A Y +T +  +ML +NLW T+      LF       G  +E + F +++P   +
Sbjct: 189 SQDHMRAHY-QTGSNHMMLNINLWSTVLLGAGILF------TGELWEFLSFAERYPTIIY 241

Query: 245 DIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVL 304
           +I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+SS QW   +
Sbjct: 242 NILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTV 301

Query: 305 MVFSGL 310
           +VF GL
Sbjct: 302 LVFLGL 307

Probable sugar transporter.

Rattus norvegicus (taxid: 10116)

>sp|Q8AWB6|S35B1_CHICK Solute carrier family 35 member B1 OS=Gallus gallus GN=SLC35B1 PE=2 SV=1

 Score =  152 bits (383), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 23/309 (7%)

Query: 12  LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAF---LNLAQNVVCLIWSYIM 68
           L L  C  G+++ Y Y GILQE+++  ++G DG R +   F   L   Q V+   ++ ++
Sbjct: 15  LRLPVCFLGVFACYFYYGILQESITRGKYG-DGARQEKFTFALSLVFIQCVINAAFAKLL 73

Query: 69  LKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL 127
           ++ + S  A     W Y +  ++          AL++++YP QVL KS K IPVML+G  
Sbjct: 74  IRFFDSVRADRTHSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVT 133

Query: 128 VYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGF 185
           V   +Y L +Y+C LL+  GV+ F  M    K      H     GYG  L  L+L  DG 
Sbjct: 134 VLRKKYPLAKYLCVLLIVTGVALF--MYKPKKGAGGDDHI---FGYGELLLLLSLTLDGL 188

Query: 186 TNATQDSITARYPKTSAWDIMLGMNLWGTIY----NLFYMFGWPHGSGFEAIQFCKQHPE 241
           T  +QD + A Y +T +  +ML +NLW T++     LF       G  +E + F +++P 
Sbjct: 189 TGVSQDHMRAHY-QTGSNHMMLNVNLWSTLFLGAGILF------TGELWEFLSFTERYPS 241

Query: 242 AAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWG 301
             ++I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S+ QW 
Sbjct: 242 IIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISTMQWV 301

Query: 302 CVLMVFSGL 310
             ++VF GL
Sbjct: 302 GTVLVFLGL 310

Probable sugar transporter.

Gallus gallus (taxid: 9031)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  150 bits (380), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 15/323 (4%)

Query: 10  RVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPD----GKRFQHLAFLNLAQNVVCLIWS 65
           + L L FC  G+  +Y+  G+LQE + T+ +G      G+RF    FL L   V+ LI +
Sbjct: 108 QALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVA 167

Query: 66  YIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMG 125
            +   L      GAP + Y  A ++N +      EALK++S+P QVLAK+SK+IPVMLMG
Sbjct: 168 GLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMG 227

Query: 126 TLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN--LAFD 183
            LV    Y   EY+   L++ GVS F L    S      + P   L  GL  L   +AFD
Sbjct: 228 KLVSRRSYEHWEYLTATLISIGVSMFLL----SSGPEPRSSPATTLS-GLILLAGYIAFD 282

Query: 184 GFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAA 243
            FT+  QD++ A   K S+  +M G+N +  ++ +  +     G+  E  +F  +H E A
Sbjct: 283 SFTSNWQDALFAY--KMSSVQMMFGVNFFSCLFTVGSLL--EQGALLEGTRFMGRHSEFA 338

Query: 244 WDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCV 303
                  +C A GQ FIF TI +FG+   T I T R+  +I++S +L G+ ++      V
Sbjct: 339 AHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGV 398

Query: 304 LMVFSGLSYQIYLKWRKLQRLQK 326
            +VF+ L  ++Y + R  QR +K
Sbjct: 399 AVVFAALLLRVYARGRLKQRGKK 421

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q8MII5|S35B1_BOVIN Solute carrier family 35 member B1 OS=Bos taurus GN=SLC35B1 PE=2 SV=2

 Score =  150 bits (380), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 166/308 (53%), Gaps = 21/308 (6%)

Query: 12  LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKR--FQHLAFLNLAQNVVCLIWSYIML 69
           L L  C  G++  Y Y GILQE ++  ++G   K+  F     L   Q VV  +++ I++
Sbjct: 12  LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVVNAVFAKILI 71

Query: 70  KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
           + + ++       W Y +  ++          AL++++YP QVL KS K IPVML+G  +
Sbjct: 72  QFFDTARVDRTRSWLYAACSVSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query: 129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
              +Y + +Y+C LL+  GV+ F  M    K +    H    +GYG  L  L+L  DG T
Sbjct: 132 LKKKYPMAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---IGYGELLLLLSLTLDGLT 186

Query: 187 NATQDSITARYPKTSAWDIMLGMNLWGTIY----NLFYMFGWPHGSGFEAIQFCKQHPEA 242
             +QD + A Y +T +  +ML +NLW T+      LF       G  +E + F +++P  
Sbjct: 187 GVSQDHMRAHY-QTGSNHMMLNINLWSTLLLGAGILF------TGELWEFLSFAERYPTI 239

Query: 243 AWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGC 302
            ++I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S  QW  
Sbjct: 240 VYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVG 299

Query: 303 VLMVFSGL 310
            ++VF GL
Sbjct: 300 TVLVFLGL 307

Probable sugar transporter.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
449434811	332	PREDICTED: UDP-galactose/UDP-glucose tra	0.993	0.990	0.906	1e-172
363807798	330	uncharacterized protein LOC100811913 [Gl	0.993	0.996	0.876	1e-171
356500433	330	PREDICTED: solute carrier family 35 memb	0.993	0.996	0.870	1e-171
18394108	331	UDP-galactose transporter 3 [Arabidopsis	0.993	0.993	0.906	1e-171
297849840	331	UDP-galactose transporter 3 [Arabidopsis	0.993	0.993	0.903	1e-171
21594408	329	unknown [Arabidopsis thaliana]	0.987	0.993	0.9	1e-167
225425760	332	PREDICTED: solute carrier family 35 memb	1.0	0.996	0.873	1e-167
357486691	332	Solute carrier family protein [Medicago	0.960	0.957	0.877	1e-165
255558178	333	UDP-galactose transporter, putative [Ric	0.951	0.945	0.905	1e-164
297814526	332	hypothetical protein ARALYDRAFT_484188 [	0.993	0.990	0.866	1e-163

>gi|449434811|ref|XP_004135189.1| PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Cucumis sativus] gi|449478437|ref|XP_004155318.1| PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Cucumis sativus]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 299/330 (90%), Positives = 318/330 (96%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HGSGFRRVL+LAFCVAGIWSAYIYQG+LQETLSTKRFG DGKRF+HL+FLNLAQNV+
Sbjct: 1   MEAHGSGFRRVLVLAFCVAGIWSAYIYQGVLQETLSTKRFGSDGKRFEHLSFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CLIWSYIM+KLWSS S GGAPWW YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLIWSYIMIKLWSSRSTGGAPWWAYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMGTLVYGI+YT PEY+CT LVAGGVS+FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGTLVYGIKYTFPEYLCTFLVAGGVSTFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSI+ARYPKTSAWDIMLGMNLWGTIYN+ YMFGWPHG+G+ AI+FC+QH
Sbjct: 181 LAFDGFTNATQDSISARYPKTSAWDIMLGMNLWGTIYNMIYMFGWPHGTGYHAIEFCRQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct: 241 PEAAWDILLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV+MVFSGLSYQIYLKWRKLQ+LQ+KRK
Sbjct: 301 WGCVVMVFSGLSYQIYLKWRKLQKLQRKRK 330

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807798|ref|NP_001242435.1| uncharacterized protein LOC100811913 [Glycine max] gi|255635145|gb|ACU17929.1| unknown [Glycine max]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/332 (87%), Positives = 314/332 (94%), Gaps = 3/332 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HG G RRVL+LAFCVAGIWSAYIYQG+LQE +STKRF  DG+RF+HLAFLNLAQNVV
Sbjct: 1   MEAHGGGLRRVLVLAFCVAGIWSAYIYQGVLQENVSTKRF--DGERFEHLAFLNLAQNVV 58

Query: 61  CLIWSYIMLKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CLIWS+IM+K+WSS ++GGAPWW+YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 59  CLIWSFIMIKMWSSGNSGGAPWWSYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 118

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMGTLVYGIRYT PEY+CT LVAGGVS+FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 119 PVMLMGTLVYGIRYTFPEYLCTFLVAGGVSTFALLKTSSKTISKLAHPNAPLGYGLCFLN 178

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDS+ ARYPKTSAWDIMLGMNLWGTIYN+ YMFGWP  SGFEA++FC+QH
Sbjct: 179 LAFDGFTNATQDSLKARYPKTSAWDIMLGMNLWGTIYNMIYMFGWPRVSGFEAVRFCQQH 238

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDIF YC CGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSS+LSGNPLS+KQ
Sbjct: 239 PEAAWDIFLYCCCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSLLSGNPLSTKQ 298

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM 331
           WGCV MVFSGLSYQIYLKW+KLQRLQKKRK +
Sbjct: 299 WGCVFMVFSGLSYQIYLKWQKLQRLQKKRKAV 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500433|ref|XP_003519036.1| PREDICTED: solute carrier family 35 member B1-like [Glycine max]

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/332 (87%), Positives = 314/332 (94%), Gaps = 3/332 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HG G RR+L+LAFCVAGIWSAYIYQG+LQE +STKRF  +G+RF+HLAFLNLAQNVV
Sbjct: 1   MEAHGGGLRRILVLAFCVAGIWSAYIYQGVLQENVSTKRF--NGERFEHLAFLNLAQNVV 58

Query: 61  CLIWSYIMLKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CLIWS+IM+K+W+S ++GGAPWW+YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 59  CLIWSFIMIKMWASGNSGGAPWWSYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 118

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMGTLVYGIRYT PEY+CT LVAGGVS+FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 119 PVMLMGTLVYGIRYTFPEYLCTFLVAGGVSTFALLKTSSKTISKLAHPNAPLGYGLCFLN 178

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDS+ ARYPKTSAWDIMLGMNLWGTIYN+ YMFGWPH SGFEA++FC+ H
Sbjct: 179 LAFDGFTNATQDSLKARYPKTSAWDIMLGMNLWGTIYNMIYMFGWPHASGFEAVRFCQHH 238

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDIF YC CGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSS+LSGNPLS+KQ
Sbjct: 239 PEAAWDIFLYCCCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSLLSGNPLSTKQ 298

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM 331
           WGCV MVFSGLSYQIYLKW+KLQRLQKKRK M
Sbjct: 299 WGCVSMVFSGLSYQIYLKWQKLQRLQKKRKAM 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394108|ref|NP_563949.1| UDP-galactose transporter 3 [Arabidopsis thaliana] gi|75191462|sp|Q9M9S6.1|UTR3_ARATH RecName: Full=UDP-galactose/UDP-glucose transporter 3; Short=AtUTr3 gi|7262678|gb|AAF43936.1|AC012188_13 Contains similarity to UDP-galactose transporter from Homo sapiens gi|2136347. ESTs gb|AI992640, gb|W43266 come from this gene [Arabidopsis thaliana] gi|12083308|gb|AAG48813.1|AF332450_1 unknown protein [Arabidopsis thaliana] gi|16649145|gb|AAL24424.1| Unknown protein [Arabidopsis thaliana] gi|21387029|gb|AAM47918.1| unknown protein [Arabidopsis thaliana] gi|332191031|gb|AEE29152.1| UDP-galactose transporter 3 [Arabidopsis thaliana]

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 299/330 (90%), Positives = 317/330 (96%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME+HGSG RRVLLL+FCVAGIW+AYIYQGILQETLSTK+FG DGKRF+HLAFLNLAQNV+
Sbjct: 1   MESHGSGLRRVLLLSFCVAGIWAAYIYQGILQETLSTKKFGEDGKRFEHLAFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WSYIM+KLWS+  +GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYTLPEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSITARYPKT+AWDIMLGMNLWGTIYN+ YMFG PHGSGFEA+QFCKQH
Sbjct: 181 LAFDGFTNATQDSITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct: 241 PEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GLSYQIYLKWRKLQR+QKK+K
Sbjct: 301 WGCVSMVFGGLSYQIYLKWRKLQRMQKKKK 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849840|ref|XP_002892801.1| UDP-galactose transporter 3 [Arabidopsis lyrata subsp. lyrata] gi|297338643|gb|EFH69060.1| UDP-galactose transporter 3 [Arabidopsis lyrata subsp. lyrata]

 Score =  605 bits (1560), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 298/330 (90%), Positives = 316/330 (95%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HGSG RRVLLL+FCVAGIW+AYIYQG+LQETLSTK+FG DGKRF+HLAFLNLAQNV+
Sbjct: 1   MEAHGSGLRRVLLLSFCVAGIWAAYIYQGVLQETLSTKKFGEDGKRFEHLAFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WSYIM+KLWS+  +GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYTLPEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSITARYPKT+AWDIMLGMNLWGTIYN+ YMFG PHGSGFEA+QFCKQH
Sbjct: 181 LAFDGFTNATQDSITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct: 241 PEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GLSYQIYLKWRKLQR+QKK+K
Sbjct: 301 WGCVSMVFGGLSYQIYLKWRKLQRMQKKKK 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21594408|gb|AAM66005.1| unknown [Arabidopsis thaliana]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/330 (90%), Positives = 314/330 (95%), Gaps = 3/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME+HGSG RRVLLL+FCVAGIW+AYIYQGILQETLSTK+FG DGKRF+HLAFLNLAQNV+
Sbjct: 1   MESHGSGLRRVLLLSFCVAGIWAAYIYQGILQETLSTKKFGEDGKRFEHLAFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WSYIM+KLWS+  +GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYTLPEY+CT LVAGGVS FAL+KT SKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTISKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSITARYPKT+AWDIMLGMNLWGTIYN+ YMFG PHGSGFEA+QFCKQH
Sbjct: 181 LAFDGFTNATQDSITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct: 241 PEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GLSYQIYLKWRKL  LQKK+K
Sbjct: 301 WGCVSMVFGGLSYQIYLKWRKL--LQKKKK 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425760|ref|XP_002277178.1| PREDICTED: solute carrier family 35 member B1 [Vitis vinifera] gi|296086405|emb|CBI31994.3| unnamed protein product [Vitis vinifera]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 290/332 (87%), Positives = 315/332 (94%), Gaps = 1/332 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME +G GFR++ +L FCV GIWSAYIYQG+LQET+STKRFG D KRF+HLAFLNLAQNVV
Sbjct: 1   MEAYGVGFRQLSVLLFCVTGIWSAYIYQGVLQETVSTKRFGADQKRFEHLAFLNLAQNVV 60

Query: 61  CLIWSYIMLKLWS-SSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WS+IM+KLWS SS+GGAPWW+YWSAGITNTIGP MGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSFIMIKLWSRSSSGGAPWWSYWSAGITNTIGPTMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYT+PEY+CTLLVAGGVSSFAL+KTSSKTISKLA PNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTIPEYVCTLLVAGGVSSFALLKTSSKTISKLARPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSITARYPKTSAWDIM GMNLWGTIYN+ YMFGWPHGSGFEA+QFC+QH
Sbjct: 181 LAFDGFTNATQDSITARYPKTSAWDIMFGMNLWGTIYNMVYMFGWPHGSGFEAVQFCRQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDIF +CLCGAVGQNFIFLTIS+FGSLTNTTITTTRKFVSIVVSS+LSGNPLS+KQ
Sbjct: 241 PEAAWDIFLFCLCGAVGQNFIFLTISQFGSLTNTTITTTRKFVSIVVSSLLSGNPLSAKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRKPM 331
           WG V MVFSGLSYQIYLKW++ QRL KKRKPM
Sbjct: 301 WGSVSMVFSGLSYQIYLKWKRGQRLHKKRKPM 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486691|ref|XP_003613633.1| Solute carrier family protein [Medicago truncatula] gi|87241136|gb|ABD32994.1| UDP-galactose transporter homolog 1, related [Medicago truncatula] gi|355514968|gb|AES96591.1| Solute carrier family protein [Medicago truncatula]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/319 (87%), Positives = 298/319 (93%), Gaps = 1/319 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HG G RR+L+LAFCVAGIWSAYIYQGILQETLSTKRFG D +RF+HLAFLNLAQNVV
Sbjct: 1   MEAHGGGLRRILVLAFCVAGIWSAYIYQGILQETLSTKRFGKDAERFEHLAFLNLAQNVV 60

Query: 61  CLIWSYIMLKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CLIWSYIM+K+W   + GGAPWW+YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLIWSYIMIKIWGGGNTGGAPWWSYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMG+LVYGIRYT+PEY+CT LVAGGVSSFAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct: 121 PVMLMGSLVYGIRYTIPEYLCTFLVAGGVSSFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDS+ ARYPKTSAW IMLGMNLWGTIYN+ YMF WP GSG+EA+ FCKQH
Sbjct: 181 LAFDGFTNATQDSLKARYPKTSAWGIMLGMNLWGTIYNMIYMFAWPSGSGYEAVNFCKQH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YC CGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSS+LSGNPLS+KQ
Sbjct: 241 PEAAWDILLYCCCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSLLSGNPLSTKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKW 318
           WGCV MVFSGLSYQIYLKW
Sbjct: 301 WGCVTMVFSGLSYQIYLKW 319

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558178|ref|XP_002520116.1| UDP-galactose transporter, putative [Ricinus communis] gi|223540608|gb|EEF42171.1| UDP-galactose transporter, putative [Ricinus communis]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 287/317 (90%), Positives = 304/317 (95%), Gaps = 2/317 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HG+G RRVL+LAFCVAGIWSAYIYQG+LQETLSTKRFGPDGKRF+HLAFLNLAQNV+
Sbjct: 1   MEAHGAGIRRVLVLAFCVAGIWSAYIYQGVLQETLSTKRFGPDGKRFEHLAFLNLAQNVI 60

Query: 61  CLIWSYIMLKLWS--SSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKM 118
           CLIWSYIM+K+WS  SS GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKM
Sbjct: 61  CLIWSYIMIKIWSRSSSGGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKM 120

Query: 119 IPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFL 178
           IPVMLMGTLVYGIRYT PEY+CT LVAGGVS+FAL+KTSSKTISKLAHPNAPLGYGLCFL
Sbjct: 121 IPVMLMGTLVYGIRYTFPEYLCTFLVAGGVSTFALLKTSSKTISKLAHPNAPLGYGLCFL 180

Query: 179 NLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQ 238
           NLAFDGFTNATQDS+TARYPKTSAWDIMLGMNLWGTIYN+ YMFGWP   G+EA+QFCKQ
Sbjct: 181 NLAFDGFTNATQDSLTARYPKTSAWDIMLGMNLWGTIYNMIYMFGWPQAIGYEAVQFCKQ 240

Query: 239 HPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSK 298
           HPEAAWDIF YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLS+K
Sbjct: 241 HPEAAWDIFLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSTK 300

Query: 299 QWGCVLMVFSGLSYQIY 315
           QWGCV++VFSGLSYQIY
Sbjct: 301 QWGCVVLVFSGLSYQIY 317

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814526|ref|XP_002875146.1| hypothetical protein ARALYDRAFT_484188 [Arabidopsis lyrata subsp. lyrata] gi|297320984|gb|EFH51405.1| hypothetical protein ARALYDRAFT_484188 [Arabidopsis lyrata subsp. lyrata]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/330 (86%), Positives = 306/330 (92%), Gaps = 1/330 (0%)

Query: 1   MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
           ME HGSGFRR++LLA C++GIWSAYIYQG+LQETLSTKRFGPD KRF+HLAFLNLAQ+VV
Sbjct: 1   MEVHGSGFRRIMLLALCISGIWSAYIYQGVLQETLSTKRFGPDEKRFEHLAFLNLAQSVV 60

Query: 61  CLIWSYIMLKLWSSSA-GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
           CL+WSYIM+KLWSS+  GGAPWW YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct: 61  CLVWSYIMIKLWSSAGNGGAPWWAYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query: 120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
           PVMLMGTLVYGIRYT PEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGY LCFLN
Sbjct: 121 PVMLMGTLVYGIRYTFPEYMCTFLVAGGVSFFALLKTSSKTISKLAHPNAPLGYALCFLN 180

Query: 180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
           LAFDGFTNATQDSI +RYPKT AWDIMLGMNLWGTIYN+ YMFG P G GFEAIQFCK H
Sbjct: 181 LAFDGFTNATQDSIASRYPKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFEAIQFCKLH 240

Query: 240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
           PEAAWDI  YCLCGAVGQNFIF+TIS FGSL NTTITTTRKFVSIVVSSV+SGNPLS KQ
Sbjct: 241 PEAAWDILKYCLCGAVGQNFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQ 300

Query: 300 WGCVLMVFSGLSYQIYLKWRKLQRLQKKRK 329
           WGCV MVF GLSYQIYLKWRKLQR++KK++
Sbjct: 301 WGCVSMVFGGLSYQIYLKWRKLQRVEKKKQ 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
TAIR|locus:2012482	331	UTR3 "AT1G14360" [Arabidopsis	0.951	0.951	0.908	4.6e-160
TAIR|locus:2058837	332	UTR1 "UDP-galactose transporte	0.951	0.948	0.867	4.1e-152
DICTYBASE|DDB_G0288929	392	DDB_G0288929 "Solute carrier f	0.906	0.765	0.367	1.2e-47
UNIPROTKB|F1NGX7	324	SLC35B1 "Solute carrier family	0.873	0.891	0.359	1.5e-42
UNIPROTKB|F1P2K4	328	SLC35B1 "Solute carrier family	0.873	0.881	0.359	1.5e-42
UNIPROTKB|Q8AWB6	325	SLC35B1 "Solute carrier family	0.873	0.889	0.359	1.5e-42
UNIPROTKB|J3KQV4	359	SLC35B1 "Solute carrier family	0.876	0.807	0.347	3.2e-42
UNIPROTKB|P78383	322	SLC35B1 "Solute carrier family	0.876	0.900	0.347	3.2e-42
RGD|727783	322	Slc35b1 "solute carrier family	0.876	0.900	0.344	5.2e-42
UNIPROTKB|Q2HJG6	355	SLC35B1 "Solute carrier family	0.876	0.816	0.344	6.6e-42

TAIR|locus:2012482 UTR3 "AT1G14360" [Arabidopsis thaliana (taxid:3702)]

 Score = 1559 (553.9 bits), Expect = 4.6e-160, P = 4.6e-160
 Identities = 287/316 (90%), Positives = 303/316 (95%)

Query:     1 MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
             ME+HGSG RRVLLL+FCVAGIW+AYIYQGILQETLSTK+FG DGKRF+HLAFLNLAQNV+
Sbjct:     1 MESHGSGLRRVLLLSFCVAGIWAAYIYQGILQETLSTKKFGEDGKRFEHLAFLNLAQNVI 60

Query:    61 CLIWSYIMLKLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
             CL+WSYIM+KLWS+  +GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct:    61 CLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query:   120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
             PVMLMG+LVYGIRYTLPEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGYGLCFLN
Sbjct:   121 PVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

Query:   180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
             LAFDGFTNATQDSITARYPKT+AWDIMLGMNLWGTIYN+ YMFG PHGSGFEA+QFCKQH
Sbjct:   181 LAFDGFTNATQDSITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQH 240

Query:   240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
             PEAAWDI  YCLCGAVGQNFIFLTISRFGSL NTTITTTRKFVSIVVSSVLSGNPLSSKQ
Sbjct:   241 PEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQ 300

Query:   300 WGCVLMVFSGLSYQIY 315
             WGCV MVF GLSYQIY
Sbjct:   301 WGCVSMVFGGLSYQIY 316

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0009553 "embryo sac development" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0030173 "integral to Golgi membrane" evidence=IDA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IEP

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2058837 UTR1 "UDP-galactose transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
 Identities = 274/316 (86%), Positives = 292/316 (92%)

Query:     1 MENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVV 60
             ME HGSGFRR+LLLA C++GIWSAYIYQG+LQETLSTKRFGPD KRF+HLAFLNLAQ+VV
Sbjct:     1 MEVHGSGFRRILLLALCISGIWSAYIYQGVLQETLSTKRFGPDEKRFEHLAFLNLAQSVV 60

Query:    61 CLIWSYIMLKLWSSSA-GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 119
             CLIWSYIM+KLWS++  GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI
Sbjct:    61 CLIWSYIMIKLWSNAGNGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMI 120

Query:   120 PVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN 179
             PVMLMGTLVYGIRYT PEY+CT LVAGGVS FAL+KTSSKTISKLAHPNAPLGY LC LN
Sbjct:   121 PVMLMGTLVYGIRYTFPEYMCTFLVAGGVSIFALLKTSSKTISKLAHPNAPLGYALCSLN 180

Query:   180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH 239
             LAFDGFTNATQDSI +RYPKT AWDIMLGMNLWGTIYN+ YMFG P G GF+AIQFCK H
Sbjct:   181 LAFDGFTNATQDSIASRYPKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFKAIQFCKLH 240

Query:   240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ 299
             PEAAWDI  YC+CGAVGQNFIF+TIS FGSL NTTITTTRKFVSIVVSSV+SGNPLS KQ
Sbjct:   241 PEAAWDILKYCICGAVGQNFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQ 300

Query:   300 WGCVLMVFSGLSYQIY 315
             WGCV MVF GL+YQIY
Sbjct:   301 WGCVSMVFGGLAYQIY 316

GO:0009507 "chloroplast" evidence=ISM

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IEP;IMP

GO:0009553 "embryo sac development" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

DICTYBASE|DDB_G0288929 DDB_G0288929 "Solute carrier family 35 member B1" [Dictyostelium discoideum (taxid:44689)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 112/305 (36%), Positives = 168/305 (55%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKL 71
             L   FCV GI+  Y+  G++QE L+  +FG + K F   AFL   Q    ++ ++++  +
Sbjct:    58 LFFIFCVGGIYIFYLLYGLVQEQLNVTKFGTEKKVFGFTAFLLALQCFFNMVSAWLVSLV 117

Query:    72 WSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGI 131
                     P+  Y    +   I   +  ++++YISYP QVLAKS K IPV+ MG L++  
Sbjct:   118 NKEQKDNTPFMKYGFVSMLLVISTFLSNQSIRYISYPTQVLAKSCKPIPVIFMGLLLFKK 177

Query:   132 RYTLPEYICTLLVAGGVSSFALMK-TSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQ 190
             +Y   +YI  ++++ G+S F L K TS K I    H +   G  + F++L  DG     Q
Sbjct:   178 KYPFLKYIVVIVISLGISLFMLPKATSKKNIQFEGHDHL-FGNFILFVSLMMDGVMGPFQ 236

Query:   191 DSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYC 250
             D++  +Y K SA  +ML  N+W     LF +  +  G   +AI F  ++PE    I  +C
Sbjct:   237 DNLVRQY-KPSATSMMLNTNIWNL--GLFSIMAFARGEVSQAIDFILEYPEVIKLILAFC 293

Query:   251 LCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGL 310
             +  A+GQ FIFLT ++FGSL  +TITTTRKF SI+VS    G+ L + QW  + MVF GL
Sbjct:   294 ITSAIGQQFIFLTTNKFGSLNCSTITTTRKFFSILVSIFYFGHSLDNLQWAAICMVFGGL 353

Query:   311 SYQIY 315
                +Y
Sbjct:   354 ILDLY 358

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1NGX7 SLC35B1 "Solute carrier family 35 member B1" [Gallus gallus (taxid:9031)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 110/306 (35%), Positives = 171/306 (55%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAF-LNLA--QNVVCLIWSYIM 68
             L L  C  G+++ Y Y GILQE+++  ++G DG R +   F L+L   Q V+   ++ ++
Sbjct:    14 LRLPVCFLGVFACYFYYGILQESITRGKYG-DGARQEKFTFALSLVFIQCVINAAFAKLL 72

Query:    69 LKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL 127
             ++ + S  A     W Y +  ++          AL++++YP QVL KS K IPVML+G  
Sbjct:    73 IRFFDSVRADRTHSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVT 132

Query:   128 VYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGF 185
             V   +Y L +Y+C LL+  GV+ F  M    K      H     GYG  L  L+L  DG 
Sbjct:   133 VLRKKYPLAKYLCVLLIVTGVALF--MYKPKKGAGGDDHI---FGYGELLLLLSLTLDGL 187

Query:   186 TNATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAW 244
             T  +QD + A Y +T +  +ML +NLW T++     +F    G  +E + F +++P   +
Sbjct:   188 TGVSQDHMRAHY-QTGSNHMMLNVNLWSTLFLGAGILFT---GELWEFLSFTERYPSIIY 243

Query:   245 DIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVL 304
             +I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S+ QW   +
Sbjct:   244 NILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISTMQWVGTV 303

Query:   305 MVFSGL 310
             +VF GL
Sbjct:   304 LVFLGL 309

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P2K4 SLC35B1 "Solute carrier family 35 member B1" [Gallus gallus (taxid:9031)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 110/306 (35%), Positives = 171/306 (55%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAF-LNLA--QNVVCLIWSYIM 68
             L L  C  G+++ Y Y GILQE+++  ++G DG R +   F L+L   Q V+   ++ ++
Sbjct:    18 LRLPVCFLGVFACYFYYGILQESITRGKYG-DGARQEKFTFALSLVFIQCVINAAFAKLL 76

Query:    69 LKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL 127
             ++ + S  A     W Y +  ++          AL++++YP QVL KS K IPVML+G  
Sbjct:    77 IRFFDSVRADRTHSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVT 136

Query:   128 VYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGF 185
             V   +Y L +Y+C LL+  GV+ F  M    K      H     GYG  L  L+L  DG 
Sbjct:   137 VLRKKYPLAKYLCVLLIVTGVALF--MYKPKKGAGGDDHI---FGYGELLLLLSLTLDGL 191

Query:   186 TNATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAW 244
             T  +QD + A Y +T +  +ML +NLW T++     +F    G  +E + F +++P   +
Sbjct:   192 TGVSQDHMRAHY-QTGSNHMMLNVNLWSTLFLGAGILFT---GELWEFLSFTERYPSIIY 247

Query:   245 DIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVL 304
             +I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S+ QW   +
Sbjct:   248 NILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISTMQWVGTV 307

Query:   305 MVFSGL 310
             +VF GL
Sbjct:   308 LVFLGL 313

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8AWB6 SLC35B1 "Solute carrier family 35 member B1" [Gallus gallus (taxid:9031)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 110/306 (35%), Positives = 171/306 (55%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAF-LNLA--QNVVCLIWSYIM 68
             L L  C  G+++ Y Y GILQE+++  ++G DG R +   F L+L   Q V+   ++ ++
Sbjct:    15 LRLPVCFLGVFACYFYYGILQESITRGKYG-DGARQEKFTFALSLVFIQCVINAAFAKLL 73

Query:    69 LKLWSS-SAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL 127
             ++ + S  A     W Y +  ++          AL++++YP QVL KS K IPVML+G  
Sbjct:    74 IRFFDSVRADRTHSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVT 133

Query:   128 VYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGF 185
             V   +Y L +Y+C LL+  GV+ F  M    K      H     GYG  L  L+L  DG 
Sbjct:   134 VLRKKYPLAKYLCVLLIVTGVALF--MYKPKKGAGGDDHI---FGYGELLLLLSLTLDGL 188

Query:   186 TNATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAW 244
             T  +QD + A Y +T +  +ML +NLW T++     +F    G  +E + F +++P   +
Sbjct:   189 TGVSQDHMRAHY-QTGSNHMMLNVNLWSTLFLGAGILFT---GELWEFLSFTERYPSIIY 244

Query:   245 DIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVL 304
             +I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S+ QW   +
Sbjct:   245 NILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISTMQWVGTV 304

Query:   305 MVFSGL 310
             +VF GL
Sbjct:   305 LVFLGL 310

GO:0055085 "transmembrane transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|J3KQV4 SLC35B1 "Solute carrier family 35 member B1" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 106/305 (34%), Positives = 167/305 (54%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKR--FQHLAFLNLAQNVVCLIWSYIML 69
             L L  C  G++  Y Y GILQE ++  ++G   K+  F     L   Q V+  +++ I++
Sbjct:    49 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILI 108

Query:    70 KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
             + + ++       W Y +  I+          AL++++YP QVL KS K IPVML+G  +
Sbjct:   109 QFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 168

Query:   129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
                +Y L +Y+C LL+  GV+ F  M    K +    H    +GYG  L  L+L  DG T
Sbjct:   169 LKKKYPLAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---VGYGELLLLLSLTLDGLT 223

Query:   187 NATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAWD 245
               +QD + A Y +T +  +ML +NLW T+   +  +F    G  +E + F +++P   ++
Sbjct:   224 GVSQDHMRAHY-QTGSNHMMLNINLWSTLLLGMGILFT---GELWEFLSFAERYPAIIYN 279

Query:   246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLM 305
             I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S  QW   ++
Sbjct:   280 ILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVL 339

Query:   306 VFSGL 310
             VF GL
Sbjct:   340 VFLGL 344

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P78383 SLC35B1 "Solute carrier family 35 member B1" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 106/305 (34%), Positives = 167/305 (54%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKR--FQHLAFLNLAQNVVCLIWSYIML 69
             L L  C  G++  Y Y GILQE ++  ++G   K+  F     L   Q V+  +++ I++
Sbjct:    12 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILI 71

Query:    70 KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
             + + ++       W Y +  I+          AL++++YP QVL KS K IPVML+G  +
Sbjct:    72 QFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query:   129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
                +Y L +Y+C LL+  GV+ F  M    K +    H    +GYG  L  L+L  DG T
Sbjct:   132 LKKKYPLAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---VGYGELLLLLSLTLDGLT 186

Query:   187 NATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAWD 245
               +QD + A Y +T +  +ML +NLW T+   +  +F    G  +E + F +++P   ++
Sbjct:   187 GVSQDHMRAHY-QTGSNHMMLNINLWSTLLLGMGILFT---GELWEFLSFAERYPAIIYN 242

Query:   246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLM 305
             I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S  QW   ++
Sbjct:   243 ILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVL 302

Query:   306 VFSGL 310
             VF GL
Sbjct:   303 VFLGL 307

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=TAS

GO:0006810 "transport" evidence=TAS

GO:0072334 "UDP-galactose transmembrane transport" evidence=TAS

RGD|727783 Slc35b1 "solute carrier family 35, member B1" [Rattus norvegicus (taxid:10116)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 105/305 (34%), Positives = 167/305 (54%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFG--PDGKRFQHLAFLNLAQNVVCLIWSYIML 69
             L L  C  G++  Y Y GILQE ++  ++G  P  + F     L   Q V+  +++ I++
Sbjct:    12 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGPKQETFTFALTLVFIQCVINAMFAKILI 71

Query:    70 KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
             + + ++       W Y +  ++          AL++++YP QVL KS K IPVML+G  +
Sbjct:    72 QFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query:   129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
                +Y L +Y+C LL+  GV+ F  M    K +    H    +G+G  L  L+L  DG T
Sbjct:   132 LKKKYPLAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---VGFGELLLLLSLTLDGLT 186

Query:   187 NATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAWD 245
               +QD + A Y +T +  +ML +NLW T+      +F    G  +E + F +++P   ++
Sbjct:   187 GVSQDHMRAHY-QTGSNHMMLNINLWSTVLLGAGILFT---GELWEFLSFAERYPTIIYN 242

Query:   246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLM 305
             I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+SS QW   ++
Sbjct:   243 ILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTVL 302

Query:   306 VFSGL 310
             VF GL
Sbjct:   303 VFLGL 307

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q2HJG6 SLC35B1 "Solute carrier family 35 member B1" [Bos taurus (taxid:9913)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 105/305 (34%), Positives = 166/305 (54%)

Query:    12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKR--FQHLAFLNLAQNVVCLIWSYIML 69
             L L  C  G++  Y Y GILQE ++  ++G   K+  F     L   Q VV  +++ I++
Sbjct:    45 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVVNAVFAKILI 104

Query:    70 KLWSSS-AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 128
             + + ++       W Y +  ++          AL++++YP QVL KS K IPVML+G  +
Sbjct:   105 QFFDTARVDRTRSWLYAACSVSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 164

Query:   129 YGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG--LCFLNLAFDGFT 186
                +Y + +Y+C LL+  GV+ F  M    K +    H    +GYG  L  L+L  DG T
Sbjct:   165 LKKKYPMAKYLCVLLIVAGVALF--MYKPKKVVGIEEHT---IGYGELLLLLSLTLDGLT 219

Query:   187 NATQDSITARYPKTSAWDIMLGMNLWGTIY-NLFYMFGWPHGSGFEAIQFCKQHPEAAWD 245
               +QD + A Y +T +  +ML +NLW T+      +F    G  +E + F +++P   ++
Sbjct:   220 GVSQDHMRAHY-QTGSNHMMLNINLWSTLLLGAGILFT---GELWEFLSFAERYPTIVYN 275

Query:   246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLM 305
             I  + L  A+GQ+FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+S  QW   ++
Sbjct:   276 ILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVL 335

Query:   306 VFSGL 310
             VF GL
Sbjct:   336 VFLGL 340

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8AXS6	S35B1_XENTR	No assigned EC number	0.3366	0.8731	0.8947	yes	no
Q8AWB6	S35B1_CHICK	No assigned EC number	0.3559	0.8640	0.88	yes	no
Q9VDD7	S35B1_DROME	No assigned EC number	0.3146	0.9063	0.8875	yes	no
Q6V7K3	S35B1_RAT	No assigned EC number	0.3398	0.8731	0.8975	yes	no
Q9M9S6	UTR3_ARATH	No assigned EC number	0.9060	0.9939	0.9939	yes	no
P78383	S35B1_HUMAN	No assigned EC number	0.3519	0.8791	0.9037	yes	no
Q755H7	HUT1_ASHGO	No assigned EC number	0.3047	0.9093	0.9290	yes	no
Q6BMV3	HUT1_DEBHA	No assigned EC number	0.3025	0.9395	0.8785	yes	no
O64503	UTR1_ARATH	No assigned EC number	0.8575	0.9939	0.9909	no	no
Q8WZJ9	HUT1_SCHPO	No assigned EC number	0.3313	0.9365	0.9627	yes	no
P97858	S35B1_MOUSE	No assigned EC number	0.3344	0.8761	0.9006	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	UTR3	UTR3 (UDP-GALACTOSE TRANSPORTER 3); pyrimidine nucleotide sugar transmembrane transporter; UDP-GALACTOSE TRANSPORTER 3 (UTR3); FUNCTIONS IN- pyrimidine nucleotide sugar transmembrane transporter activity; LOCATED IN- endomembrane system; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- UAA transporter (InterPro-IPR013657); BEST Arabidopsis thaliana protein match is- UTR1 (UDP-GALACTOSE TRANSPORTER 1); UDP-galactose transmembrane transporter/ UDP-glucose transmembrane transporter/ pyrimidine nucleotide sugar transmembrane transporter (TA [...] (331 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	VAP	VAP (VESICLE ASSOCIATED PROTEIN); protein binding; Encodes VAP27 (for Vesicle-Associated Protei [...] (256 aa)				•	•				0.931
	anac089	anac089 (Arabidopsis NAC domain containing protein 89); transcription factor; Arabidopsis NAC d [...] (340 aa)					•				0.923
	NTL9	NTL9 (NAC transcription factor-like 9); transcription factor; NAC transcription factor-like 9 ( [...] (534 aa)					•				0.923
	WIP1	WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization; [...] (489 aa)					•				0.923
	AT4G26450	unknown protein; unknown protein; Has 2630 Blast hits to 1931 proteins in 274 species- Archae - [...] (708 aa)					•				0.923
	NLM1	NLM1; arsenite transmembrane transporter/ water channel; an aquaporin whose expression level is [...] (296 aa)					•				0.923
	AT1G27300	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (200 aa)					•				0.923
	UTR1	UTR1 (UDP-GALACTOSE TRANSPORTER 1); UDP-galactose transmembrane transporter/ UDP-glucose transm [...] (332 aa)				•			•	•	0.918
	SDF2	SDF2 (STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN PRECURSOR); STROMAL CELL-DERIVED FACTOR 2-LIKE [...] (218 aa)				•					0.877
	ATERDJ3B	ATERDJ3B; heat shock protein binding / unfolded protein binding; J domain protein localized in [...] (346 aa)				•					0.865

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	331
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-107

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  313 bits (805), Expect = e-107
 Identities = 109/308 (35%), Positives = 156/308 (50%), Gaps = 7/308 (2%)

Query: 14  LAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWS 73
              C++GI+  Y   G+LQE + T+ +G           L  AQ +   +   + L L+ 
Sbjct: 1   FLICISGIFGGYCSNGVLQELIMTREYGSP-----FGNLLTFAQFLFISLVGLLYLLLFK 55

Query: 74  SSA-GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIR 132
                  P  TY     T  +   +  EALKYISYP  V+ KS K+IPVM++G L+YG R
Sbjct: 56  KLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKR 115

Query: 133 YTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDS 192
           Y+  +Y+  LL+  GV  F L        SKL   +  +G  L F  L  D  T  TQ+ 
Sbjct: 116 YSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEK 175

Query: 193 ITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC 252
           +  +Y K S  ++M   +L    + L  +     G  F A  FC +HP   + +    L 
Sbjct: 176 LYKKYGKHS-KEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLT 234

Query: 253 GAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSY 312
             VGQ F+F  IS FG+LT T +TT RKFVS+++S +L GNPL+ +QW   L+VF G+  
Sbjct: 235 QYVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFL 294

Query: 313 QIYLKWRK 320
             YLK +K
Sbjct: 295 YAYLKKKK 302

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	331
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.93
PRK11272	292	putative DMT superfamily transporter inner membran	99.93
PRK15430	296	putative chloramphenical resistance permease RarD;	99.92
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.92
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.92
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.9
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.82
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.81
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.77
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.74
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.71
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.71
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.7
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.68
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.66
COG2962	293	RarD Predicted permeases [General function predict	99.65
KOG2765	416	consensus Predicted membrane protein [Function unk	99.6
KOG2766	336	consensus Predicted membrane protein [Function unk	99.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.06
COG2510	140	Predicted membrane protein [Function unknown]	98.97
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.92
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.89
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.87
PRK15430	296	putative chloramphenical resistance permease RarD;	98.78
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.78
PLN00411	358	nodulin MtN21 family protein; Provisional	98.56
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.54
COG2510	140	Predicted membrane protein [Function unknown]	98.47
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.39
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.35
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.35
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.29
PRK11272	292	putative DMT superfamily transporter inner membran	98.21
COG2962	293	RarD Predicted permeases [General function predict	98.19
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.11
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.07
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.02
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.98
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.94
PRK11689	295	aromatic amino acid exporter; Provisional	97.94
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.92
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.88
PRK13499	345	rhamnose-proton symporter; Provisional	97.72
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.64
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.59
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.58
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.58
PRK13499	345	rhamnose-proton symporter; Provisional	97.55
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.43
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.39
PRK11431	105	multidrug efflux system protein; Provisional	97.38
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.33
COG2076	106	EmrE Membrane transporters of cations and cationic	97.33
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.32
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.28
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.19
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.14
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.02
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.97
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.95
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.91
PRK11431	105	multidrug efflux system protein; Provisional	96.86
COG2076	106	EmrE Membrane transporters of cations and cationic	96.71
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.61
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.88
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.58
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.5
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.48
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.21
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.08
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.87
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.64
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.41
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.27
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.23
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.45
KOG1581	327	consensus UDP-galactose transporter related protei	91.02
KOG2765	416	consensus Predicted membrane protein [Function unk	90.79
KOG3912	372	consensus Predicted integral membrane protein [Gen	89.36
KOG1580	337	consensus UDP-galactose transporter related protei	87.47
KOG1582	367	consensus UDP-galactose transporter related protei	87.03
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	86.12
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	81.88

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-54  Score=376.36  Aligned_cols=320  Identities=50%  Similarity=0.817  Sum_probs=297.0

Q ss_pred             CCCCCC--chhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhc-cCCCC
Q 020068            2 ENHGSG--FRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWS-SSAGG   78 (331)
Q Consensus         2 ~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~-~~~~~   78 (331)
                      |-||..  .++..++++|+.|++.+|+.||++||++.+.+|++|+++|++|.++.++|.+.+.++++.+...++ +...+
T Consensus         1 ~~~~~~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~   80 (327)
T KOG1581|consen    1 ESVNSGGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGV   80 (327)
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCC
Confidence            667777  778899999999999999999999999999999999999999999999999999999988776655 34567


Q ss_pred             CchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCc
Q 020068           79 APWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSS  158 (331)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~  158 (331)
                      .||++|..+++.+..+.++.++||+|+++|++++.|+++.+|||+++.+++|+|++.+++++.+++..|+.++...+.++
T Consensus        81 apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   81 APLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             CchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999876544


Q ss_pred             cccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhh
Q 020068          159 KTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (331)
                       ..++..+++..+|+.++..++.+||+++..||++++++ +.+++++|+++|+++++..+...+  ..|.+.++++|...
T Consensus       161 -s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li--~qg~~~~av~F~~~  236 (327)
T KOG1581|consen  161 -SSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLI--LQGHLLPAVSFIKE  236 (327)
T ss_pred             -CccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhh--cCCCCchHHHHHHc
Confidence             22344456889999999999999999999999999988 999999999999999999999877  88889999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          239 HPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       239 ~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      ||+.++++++++.|+++||.++|+.++++||++.+++++.|+++++++|.++|||++++.||.|+.++++|+.+..+.|+
T Consensus       237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHhh
Q 020068          319 RKLQRLQ  325 (331)
Q Consensus       319 ~~~~~~~  325 (331)
                      |+++.++
T Consensus       317 ~~~~~~~  323 (327)
T KOG1581|consen  317 KKNQPRK  323 (327)
T ss_pred             hccCccc
Confidence            8433333

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.7e-52  Score=345.98  Aligned_cols=311  Identities=30%  Similarity=0.502  Sum_probs=281.8

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCC---CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhc-cCCCCC
Q 020068            4 HGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFG---PDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWS-SSAGGA   79 (331)
Q Consensus         4 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~---~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~-~~~~~~   79 (331)
                      -.+...+..++.+|.+|+++||..||+.||++.+..|+   ++.++|++.+.++|+|+..+.+++-+...+++ .+.++.
T Consensus         4 ~~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t   83 (337)
T KOG1580|consen    4 VRSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT   83 (337)
T ss_pred             cccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC
Confidence            34455667899999999999999999999999998876   35579999999999999999999866555544 456778


Q ss_pred             chHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcc
Q 020068           80 PWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSK  159 (331)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~  159 (331)
                      |.+.|...++.|.+.+..+|.+++|+|+|++++-||++|||||+++.++.+|+|+|+++.++++++.|++++.+++.+..
T Consensus        84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~  163 (337)
T KOG1580|consen   84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG  163 (337)
T ss_pred             cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999875432


Q ss_pred             ccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhC
Q 020068          160 TISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH  239 (331)
Q Consensus       160 ~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  239 (331)
                         +.++.....|-+++++|..+|++....|||+.+.| ..+..++|+|+|+++.+.+....+  ++||+++.+.|.+.|
T Consensus       164 ---g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~~MM~~~NlwStL~Lg~g~l--fTGElweF~yF~~Rh  237 (337)
T KOG1580|consen  164 ---GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGTSMMFYTNLWSTLYLGAGLL--FTGELWEFFYFVQRH  237 (337)
T ss_pred             ---CCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCchhhHHHHHHHHHHHhhhhhe--ehhhHHHHHHHHHhc
Confidence               22334456899999999999999999999999988 778899999999999999988777  899999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      |..|+.+.++++++++||.++|..+..+||++.|++++.|+.++++.|+++|+++++..||+|..+++.|........+|
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988776554


Q ss_pred             H
Q 020068          320 K  320 (331)
Q Consensus       320 ~  320 (331)
                      .
T Consensus       318 a  318 (337)
T KOG1580|consen  318 A  318 (337)
T ss_pred             C
Confidence            4

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=2.1e-47  Score=349.85  Aligned_cols=299  Identities=36%  Similarity=0.605  Sum_probs=272.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhc-cCCCCCchHHHHHHHHHHHh
Q 020068           15 AFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWS-SSAGGAPWWTYWSAGITNTI   93 (331)
Q Consensus        15 ~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   93 (331)
                      ++|++|+|++|+.++++||++.+.+++     .++|.++++.|+.++++.+.+.....+ +++++.|+++|++.++++.+
T Consensus         2 ~~~~~~i~~~~~~~g~~qE~i~~~~~~-----~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (303)
T PF08449_consen    2 LICVAGIFGGCCSYGILQEKIMTTPYG-----SPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFL   76 (303)
T ss_pred             EeeHHHHHHHHHHHHHHHHHHHcCCCC-----CcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHH
Confidence            578999999999999999999987653     268999999999999999988877666 56788899999999999999


Q ss_pred             hhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhH
Q 020068           94 GPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGY  173 (331)
Q Consensus        94 ~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~  173 (331)
                      ++.++|.|++|+|+|+++++|+++|+++|+++.+++|||++++|+++++++++|++++..+|.+++++++........|+
T Consensus        77 ~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~  156 (303)
T PF08449_consen   77 ASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGI  156 (303)
T ss_pred             HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHH
Confidence            99999999999999999999999999999999999999999999999999999999999987655433222222334499


Q ss_pred             HHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcC--CCChHHHHHHhhhCchHHHHHHHHHH
Q 020068          174 GLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWP--HGSGFEAIQFCKQHPEAAWDIFFYCL  251 (331)
Q Consensus       174 ~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~  251 (331)
                      +++++|.++||+.+++|||+++++ +.++.|+++|+|.++.+..++...  .  .+|..+..++...+|+.+..++..++
T Consensus       157 ~ll~~sl~~~a~~~~~qe~~~~~~-~~~~~~~mfy~n~~~~~~~~~~~~--~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  157 ILLLLSLLLDAFTGVYQEKLFKKY-GKSPWELMFYTNLFSLPFLLILLF--LLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHH--HHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            999999999999999999999999 889999999999999999998877  5  78888888888889998889999999


Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHh
Q 020068          252 CGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKL  321 (331)
Q Consensus       252 ~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~  321 (331)
                      ++++++.+++.+++++||++.++++++||++++++|+++|||++++.||+|+++++.|..+|.+.|+||+
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999988864

; GO: 0055085 transmembrane transport

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.4e-45  Score=309.82  Aligned_cols=296  Identities=27%  Similarity=0.408  Sum_probs=274.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHH
Q 020068            8 FRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQ-HLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWS   86 (331)
Q Consensus         8 ~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~-~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   86 (331)
                      .+|++|+++|++|++..|+.||++||.+++.      ++|+ +.|.+|+.|++....+.++.+..++.+++.+|||.|..
T Consensus        38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~------~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~  111 (367)
T KOG1582|consen   38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNV------EGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVI  111 (367)
T ss_pred             CchhhhHHHHHhHHHHHHHHHHHHHHHHhcc------ccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhh
Confidence            3578999999999999999999999999863      4777 88999999999988888777666667788899999999


Q ss_pred             HHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCC
Q 020068           87 AGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAH  166 (331)
Q Consensus        87 ~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~  166 (331)
                      ++....+.++++|.|+.|+++|+|+++|+|+.+|||+.+.++-++||++.++.+..+++.|++.++..|...      ++
T Consensus       112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~------sP  185 (367)
T KOG1582|consen  112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT------SP  185 (367)
T ss_pred             hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc------CC
Confidence            999999999999999999999999999999999999999999999999999999999999999999988654      46


Q ss_pred             CCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCch-HHHH
Q 020068          167 PNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPE-AAWD  245 (331)
Q Consensus       167 ~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  245 (331)
                      +++..|+.++..|+++||..++.||+.++.+ +.+..|+.+|...++.+..+..++  .+||+.+++.+...||. ....
T Consensus       186 NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~-~~ss~EmvfySy~iG~vflf~~mv--lTge~f~a~~fcaehp~~tyGy  262 (367)
T KOG1582|consen  186 NFNLIGVMMISGALLADAVIGNVQEKAMKMN-PASSSEMVFYSYGIGFVFLFAPMV--LTGELFSAWTFCAEHPVRTYGY  262 (367)
T ss_pred             CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC-CCCcceEEEeeecccHHHHHHHHH--hcccchhhhHHHHhCcHhHHHH
Confidence            8999999999999999999999999999988 678899999999999999998887  89999999999888886 5667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       246 i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      .++.+..+++|+.+....++.+||.+++.+++.||.+|+++|+++|.+|+|..+.-|..+++.|++++.+.|+
T Consensus       263 ~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  263 AFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            7888999999999999999999999999999999999999999999999999999999999999999998873

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=4e-34  Score=262.18  Aligned_cols=287  Identities=14%  Similarity=0.084  Sum_probs=226.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhcc---CCCCCchHHHHHHH
Q 020068           12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSS---SAGGAPWWTYWSAG   88 (331)
Q Consensus        12 ~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~   88 (331)
                      ++..+.++.||.....+.++||.+++        .|++|.++++.|+.++++...+......+   +.+++.++..++.|
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~--------~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   72 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLN--------VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVA   72 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHh--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            35677888999999999999988863        58899999999999988776655322111   22344567788999


Q ss_pred             HHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCC
Q 020068           89 ITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPN  168 (331)
Q Consensus        89 ~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~  168 (331)
                      ++.+.+..++|.|++|++++++++++++.|+++++++.+++|||++++++.+++++++|+.+...++          .++
T Consensus        73 ~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~----------~~~  142 (302)
T TIGR00817        73 IVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE----------LSF  142 (302)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc----------ccc
Confidence            9988899999999999999999999999999999999999999999999999999999998765322          135


Q ss_pred             CchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChH-HHHHHhh----hCchHH
Q 020068          169 APLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGF-EAIQFCK----QHPEAA  243 (331)
Q Consensus       169 ~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~  243 (331)
                      +..|++++++|.++++++.++.||..++. +.++.+++.|++.++.+...|+..  ..++.. ...++..    ..+...
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~  219 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAF--ITEGPPFLPHGFMQAISGVNVTKI  219 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHH--HHcchHHHHHHHHHhhcccCchHH
Confidence            67899999999999999999999987643 468899999999999998888765  222211 1111111    111111


Q ss_pred             HH-HHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          244 WD-IFFYCL-CGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       244 ~~-i~~~~~-~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      +. .+..+. +..+.+.+++.+++++||.++++.++++|++++++|++++||++|+.+++|.++++.|+++|++.|+|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            21 222222 22344457788999999999999999999999999999999999999999999999999999876543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.4e-32  Score=256.18  Aligned_cols=290  Identities=11%  Similarity=0.063  Sum_probs=227.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCC-----CchHH
Q 020068            9 RRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGG-----APWWT   83 (331)
Q Consensus         9 ~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~-----~~~~~   83 (331)
                      .+.+|.+..++.||.+.....+.+|.+++        .+++|++++.+|++++++++.+......+++++     ..++.
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~--------~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  116 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLALN--------MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKN  116 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            34799999999999999999999998873        578899999999999988776554332222222     24567


Q ss_pred             HHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccccc
Q 020068           84 YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISK  163 (331)
Q Consensus        84 ~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~  163 (331)
                      .+++|+++.......+.|++++++++++++|++.|+++++++.+++|||++++++.+++++++|+.+...+|.       
T Consensus       117 llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------  189 (350)
T PTZ00343        117 FLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------  189 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------
Confidence            8999999888777889999999999999999999999999999999999999999999999999999886443       


Q ss_pred             CCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCC----CCChhhHHHHHHHHHHHHHHHHhhhcCCC-ChHHHHHHh--
Q 020068          164 LAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYP----KTSAWDIMLGMNLWGTIYNLFYMFGWPHG-SGFEAIQFC--  236 (331)
Q Consensus       164 ~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~--  236 (331)
                         ++++.|++++++|++++++++++.|+.+++++    +.++.++..++.+++.++.+|+... .++ +........  
T Consensus       190 ---~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~-~e~~~~~~~~~~~~~  265 (350)
T PTZ00343        190 ---HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLF-FEGKKWVPVWTNYTA  265 (350)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHhhh
Confidence               35678999999999999999999999887542    2456667777789999998887641 111 111111000  


Q ss_pred             hhCc----hHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHH
Q 020068          237 KQHP----EAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSY  312 (331)
Q Consensus       237 ~~~~----~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~  312 (331)
                      ....    ..+..++..+++.++-+.+.|++++++||.++++.+++||++++++|++++||++|+.+++|.++++.|+++
T Consensus       266 ~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        266 NMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            0001    111112222223334445566799999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q 020068          313 QIYLK  317 (331)
Q Consensus       313 ~~~~k  317 (331)
                      |++.|
T Consensus       346 Ys~~k  350 (350)
T PTZ00343        346 YSLFK  350 (350)
T ss_pred             HhhcC
Confidence            98763

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-35  Score=251.24  Aligned_cols=296  Identities=18%  Similarity=0.222  Sum_probs=238.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHH
Q 020068           13 LLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNT   92 (331)
Q Consensus        13 ~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (331)
                      +-+..+.+++++||.+.+..|.+.|..+|.       ...+|+.|+++.+.-.++..--....+++.|.|+|+..-.++.
T Consensus         3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~pgs-------gNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF   75 (330)
T KOG1583|consen    3 MAAAAISLVFGGCCSNVVFLELLVRNEPGS-------GNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFF   75 (330)
T ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHhCCCC-------eeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheee
Confidence            445678899999999999999999876652       2489999999988887765422223458899999999999999


Q ss_pred             hhhHHhHhhhcc-cchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccc-------ccC
Q 020068           93 IGPAMGIEALKY-ISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTI-------SKL  164 (331)
Q Consensus        93 ~~~~~~~~sl~~-i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~-------~~~  164 (331)
                      ..+.++|.++++ +|.|.+.++|+.+++.+|++++++.||||+.+|+.+++++.+|+++++..++.+.+.       ++.
T Consensus        76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~  155 (330)
T KOG1583|consen   76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSA  155 (330)
T ss_pred             eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcc
Confidence            999999999998 999999999999999999999999999999999999999999999999765433221       101


Q ss_pred             CCCCC--chhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhC---
Q 020068          165 AHPNA--PLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQH---  239 (331)
Q Consensus       165 ~~~~~--~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---  239 (331)
                      ..+..  ..|+.++..|.+.+|..+++||+..+|| +.++.|.++|++..+.+..+.     ..+++.+.+.....+   
T Consensus       156 ~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ky-GKh~~EalFytH~LsLP~Flf-----~~~div~~~~~~~~se~~  229 (330)
T KOG1583|consen  156 QSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKY-GKHWKEALFYTHFLSLPLFLF-----MGDDIVSHWRLAFKSESY  229 (330)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHhccchHHH-----hcchHHHHHHHHhcCcce
Confidence            11122  3688899999999999999999999999 889999999999999887653     335555544322222   


Q ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHH
Q 020068          240 ---------PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGL  310 (331)
Q Consensus       240 ---------~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv  310 (331)
                               |..|++++...+..++..--++.+..+++++|.+++-++||.+++++|.++|++++|+.+|+|.++|+.|-
T Consensus       230 ~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt  309 (330)
T KOG1583|consen  230 LIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGT  309 (330)
T ss_pred             eccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHH
Confidence                     33444454444455554455788899999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHh
Q 020068          311 SYQIYLKWRKL  321 (331)
Q Consensus       311 ~~~~~~k~~~~  321 (331)
                      ..++-..++.+
T Consensus       310 ~~fa~~~~~~~  320 (330)
T KOG1583|consen  310 LLFANVWNHPK  320 (330)
T ss_pred             HHHHHHHcCcc
Confidence            88765544433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=5.6e-34  Score=256.54  Aligned_cols=303  Identities=16%  Similarity=0.142  Sum_probs=254.1

Q ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC----C
Q 020068            2 ENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSA----G   77 (331)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~----~   77 (331)
                      |+-++..++.++..++...||++......+++.+++.      .+|++|.++|.+|+..+++........+-.++    +
T Consensus         6 ~~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~------~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~   79 (316)
T KOG1441|consen    6 EPASGQLKKILRIGIAFAIWYVLSVGVIILNKYILSK------YGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISS   79 (316)
T ss_pred             cCcccccchhHHHHHHHHHHhhhheeeEEeeHhhhcc------CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Confidence            4445666677888888999999999999999888753      48999999999988887776666544433222    3


Q ss_pred             CCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCC
Q 020068           78 GAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTS  157 (331)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~  157 (331)
                      +.+++..+++|+++..+.+++|.|++|+|+++++++|+++|+++.+++.++.+|++++..+.++++++.|+.+.+.+|. 
T Consensus        80 ~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-  158 (316)
T KOG1441|consen   80 KLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-  158 (316)
T ss_pred             ccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-
Confidence            4688999999999999999999999999999999999999999999999999999999999999999999999998664 


Q ss_pred             ccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHh--hCCCCChhhHHHHHHHHHHHHHH-HHhhhcCCCChHHHHH
Q 020068          158 SKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITA--RYPKTSAWDIMLGMNLWGTIYNL-FYMFGWPHGSGFEAIQ  234 (331)
Q Consensus       158 ~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~  234 (331)
                               ++++.|++.++.+.+..++++++++++++  ++ +.|+.+++.|+.+++.+..+ |+... .+++......
T Consensus       159 ---------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~-~~~~~~ll~y~ap~s~~~Ll~P~~~~-~~~~~~~~~~  227 (316)
T KOG1441|consen  159 ---------SFNLFGFISAMISNLAFALRNILSKKLLTSKGE-SLNSMNLLYYTAPISLIFLLIPFLDY-VEGNKFVGFL  227 (316)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-ccCchHHHHHhhhHHHHHHhcchHhh-hcccceeeee
Confidence                     58999999999999999999999999984  44 78999999999999999999 76541 2232210000


Q ss_pred             HhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          235 FCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       235 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      ....+.. .......++++++.|...|.+++++||+|.++.+..|.++.++.|+++|+|++|+.|..|+++.+.|+.+|+
T Consensus       228 ~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  228 TAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             ccccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            1011112 223445557888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHH
Q 020068          315 YLKWRKLQR  323 (331)
Q Consensus       315 ~~k~~~~~~  323 (331)
                      +.|.|++++
T Consensus       307 ~~k~~~~~~  315 (316)
T KOG1441|consen  307 RAKLKEKKG  315 (316)
T ss_pred             HHhhhhhcc
Confidence            998887664

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.97  E-value=4.9e-29  Score=216.82  Aligned_cols=292  Identities=17%  Similarity=0.209  Sum_probs=230.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccC----CCCCchH
Q 020068            7 GFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSS----AGGAPWW   82 (331)
Q Consensus         7 ~~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~----~~~~~~~   82 (331)
                      .|++.++-....++.+..|-..++.....+|+.    +.+|++|++++.+|.++-.+++...++..+++    +.+..|+
T Consensus         6 ~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~----~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~   81 (349)
T KOG1443|consen    6 LDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWL----TKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWR   81 (349)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----hcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHH
Confidence            344544444444444455555555555555443    24799999999999999998887776554432    2344576


Q ss_pred             HHH----HHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCc
Q 020068           83 TYW----SAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSS  158 (331)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~  158 (331)
                      +++    |.|++.+.+.+++|+|++|++++.|++.||++++|+.+++.++--|+++|.-...++++.+|++++++++.  
T Consensus        82 ~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT--  159 (349)
T KOG1443|consen   82 DYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST--  159 (349)
T ss_pred             HHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc--
Confidence            665    99999999999999999999999999999999999999999999999999999999999999999998764  


Q ss_pred             cccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCC--CCChhhHHHHHHHHHHHHHHHHhhhcCCCChH--HHHH
Q 020068          159 KTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYP--KTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGF--EAIQ  234 (331)
Q Consensus       159 ~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~  234 (331)
                              +++..|+.++..|.++.|+++.+.+.++++.+  ..+|.+.+++.++++.+..+|..+. ++|...  ..-.
T Consensus       160 --------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~-fEG~~~~~~s~~  230 (349)
T KOG1443|consen  160 --------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLL-FEGLHLITSSSI  230 (349)
T ss_pred             --------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHH-HcccccchhhhH
Confidence                    58999999999999999999999888887652  4689999999999999988887652 444211  1111


Q ss_pred             HhhhCc-hHHHHHHHHHHHHHHHH---HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHH
Q 020068          235 FCKQHP-EAAWDIFFYCLCGAVGQ---NFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGL  310 (331)
Q Consensus       235 ~~~~~~-~~~~~i~~~~~~~~~~~---~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv  310 (331)
                      +...++ ..+..+..++.++..++   .+.|....+++..|.++++..|.+.+++++.++.+|.++..+|.|..+++.|+
T Consensus       231 f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi  310 (349)
T KOG1443|consen  231 FRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGI  310 (349)
T ss_pred             HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHH
Confidence            222222 34444444455544333   56788999999999999999999999999999999999999999999999999


Q ss_pred             HHH
Q 020068          311 SYQ  313 (331)
Q Consensus       311 ~~~  313 (331)
                      .++
T Consensus       311 ~~~  313 (349)
T KOG1443|consen  311 LLH  313 (349)
T ss_pred             HHh
Confidence            998

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=3.3e-26  Score=212.87  Aligned_cols=309  Identities=10%  Similarity=0.035  Sum_probs=217.5

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhcc--CCCCCchHH
Q 020068            6 SGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSS--SAGGAPWWT   83 (331)
Q Consensus         6 ~~~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~--~~~~~~~~~   83 (331)
                      +.++|..+.-.....+-.+|..+.++.+...+.       +.+ |..+.++|+.+++++..++...+++  ++++.++++
T Consensus         6 ~~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-------G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~   77 (358)
T PLN00411          6 SLWRREAVFLTAMLATETSVVGISTLFKVATSK-------GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI   77 (358)
T ss_pred             hhhhhccchHHHHHHHHHHHHHHHHHHHHHHHC-------CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH
Confidence            446676666666666777777777777777653       222 5678899999998888766544322  223333444


Q ss_pred             ---HHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHh------hccccCchhHHHHHHHhhhhhhhccc
Q 020068           84 ---YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV------YGIRYTLPEYICTLLVAGGVSSFALM  154 (331)
Q Consensus        84 ---~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~------~~e~~~~~~~~~~~~i~~Gv~l~~~~  154 (331)
                         +...+++......+.+.+++|++.+.+.++.++.|+++++++.++      +|||.++++++++++.++|+.+....
T Consensus        78 ~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         78 LSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence               445555554455678999999999999999999999999999999      69999999999999999999987643


Q ss_pred             cCCc--c-----------cc-ccCCCCCC-chhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHH
Q 020068          155 KTSS--K-----------TI-SKLAHPNA-PLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLF  219 (331)
Q Consensus       155 ~~~~--~-----------~~-~~~~~~~~-~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~  219 (331)
                      +...  .           .. ....+..+ ..|.+++++|++++|++.+.+++..++++  +.....++...++.+...+
T Consensus       158 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~--~~~~~t~~~~~~~~~~~~~  235 (358)
T PLN00411        158 HGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP--AAFTVSFLYTVCVSIVTSM  235 (358)
T ss_pred             cCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHhHHHHHHHHHHHHHHHH
Confidence            2110  0           00 00011122 45999999999999999999999888772  2334455555555444443


Q ss_pred             HhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchh
Q 020068          220 YMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ  299 (331)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~  299 (331)
                      .... .+++-.... ....+.. ...+++.+++..+++.++++++++.||.++++..++.|++++++|++++||++++.+
T Consensus       236 ~~l~-~~~~~~~~~-~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~  312 (358)
T PLN00411        236 IGLV-VEKNNPSVW-IIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC  312 (358)
T ss_pred             HHHH-HccCCcccc-eeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH
Confidence            3331 211100000 0111222 223455556556788899999999999999999999999999999999999999999


Q ss_pred             hhhHhHHHHHHHHHHHHHHHHhHHhhhh
Q 020068          300 WGCVLMVFSGLSYQIYLKWRKLQRLQKK  327 (331)
Q Consensus       300 ~~G~~lv~~Gv~~~~~~k~~~~~~~~~~  327 (331)
                      ++|.++++.|+++..+.|+|+.+.+++.
T Consensus       313 ~iG~~LIl~Gv~l~~~~~~~~~~~~~~~  340 (358)
T PLN00411        313 LIGGILITLGFYAVMWGKANEEKDQLLS  340 (358)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhcccC
Confidence            9999999999999988777765544444

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=2e-26  Score=203.41  Aligned_cols=287  Identities=15%  Similarity=0.126  Sum_probs=234.0

Q ss_pred             HHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh---ccCCCCCchHHHHHHHHHHHhhhHHhH
Q 020068           23 SAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLW---SSSAGGAPWWTYWSAGITNTIGPAMGI   99 (331)
Q Consensus        23 ~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (331)
                      ++|+..+.+...+||....  ..+|+..+++...|.+.+.+..+...+.+   .++.++...|+++|+++.+.++...+-
T Consensus        18 ~~Y~~sS~lm~vvNK~vls--~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~   95 (314)
T KOG1444|consen   18 LFYCLSSILMTVVNKIVLS--SYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGS   95 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcc
Confidence            4555555555555554332  34666556666699999887776553322   134556778899999999999999999


Q ss_pred             hhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHH
Q 020068          100 EALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLN  179 (331)
Q Consensus       100 ~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a  179 (331)
                      .+++|+++|.++++|..+|+.+++.+..++|+|+++..+.++..+.+|.......|.          .++..|+.|++.+
T Consensus        96 ~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----------sf~~~gY~w~~~n  165 (314)
T KOG1444|consen   96 KSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL----------SFNLRGYSWALAN  165 (314)
T ss_pred             ccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc----------eecchhHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999887664          3677899999999


Q ss_pred             HHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHh---hhCchHHHHHHHHHHHHHHH
Q 020068          180 LAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFC---KQHPEAAWDIFFYCLCGAVG  256 (331)
Q Consensus       180 ~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~  256 (331)
                      .+..+...++.|+..+.. +.+.+++++|.++++.+.+....+  +.||+. ...+.   ..++..+..+.+.|+++...
T Consensus       166 ~~~~a~~~v~~kk~vd~~-~l~~~~lv~yNnl~~L~~l~~~~~--~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~i  241 (314)
T KOG1444|consen  166 CLTTAAFVVYVKKSVDSA-NLNKFGLVFYNNLLSLPPLLILSF--ITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGI  241 (314)
T ss_pred             HHHHHHHHHHHHHhhccc-cccceeEEeehhHHHHHHHHHHHH--HhcchH-HHHhhcccccchhHHHHHHHHHHHHHHH
Confidence            999999999988877655 778999999999999999988776  778865 33332   12344555667778888888


Q ss_pred             HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHhHHhh
Q 020068          257 QNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQRLQ  325 (331)
Q Consensus       257 ~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~~~~~  325 (331)
                      .++.+++.+..||+|.++++...+..+.+...+.+|+++++.+.+|+.+-+.|-..|++.++|+|+.++
T Consensus       242 sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  242 SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            899999999999999999997777777777777777899999999999999999999999988777654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=4.8e-25  Score=201.24  Aligned_cols=267  Identities=14%  Similarity=0.155  Sum_probs=209.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhccC-----CCCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHH
Q 020068           46 RFQHLAFLNLAQNVVCLIWSYIMLKLWSSS-----AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIP  120 (331)
Q Consensus        46 ~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~  120 (331)
                      +++.|.+-++..++.-.++-......++++     ..+.++++|+.+|++-+.++.+.+.|++|.+++..+++.++..++
T Consensus        39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~  118 (334)
T PF06027_consen   39 GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPF  118 (334)
T ss_pred             CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHH
Confidence            566787777777655444333333333221     235788999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCC
Q 020068          121 VMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKT  200 (331)
Q Consensus       121 v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~  200 (331)
                      +++++++++|+|+++.+++++++.++|+.+....|....+ +..+.++...|++++++++.++|+.++.+|+..|+.   
T Consensus       119 ~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~-~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~---  194 (334)
T PF06027_consen  119 VMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGS-DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA---  194 (334)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccc-cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC---
Confidence            9999999999999999999999999999999887754321 112345678999999999999999999999998765   


Q ss_pred             ChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 020068          201 SAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRK  280 (331)
Q Consensus       201 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~  280 (331)
                      +..+.+....+++.++..+...+ .+.+   .++..+++++.+...+.++++-...+.+.-..++..||+..++....-+
T Consensus       195 ~~~~~lg~~Glfg~ii~~iq~~i-le~~---~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd  270 (334)
T PF06027_consen  195 PRVEFLGMLGLFGFIISGIQLAI-LERS---GIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSD  270 (334)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh-eehh---hhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhh
Confidence            67888888899999888876542 2222   1222233444444444444444455556677899999999999888999


Q ss_pred             HHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHH
Q 020068          281 FVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRK  320 (331)
Q Consensus       281 v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~  320 (331)
                      +.++++++++||+++++..++|.++++.|+.+|....++.
T Consensus       271 ~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  271 FYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            9999999999999999999999999999999998765443

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=3.9e-28  Score=207.96  Aligned_cols=312  Identities=13%  Similarity=0.050  Sum_probs=260.5

Q ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhcc-----CC
Q 020068            2 ENHGSGFRRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSS-----SA   76 (331)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~-----~~   76 (331)
                      |||....+++.|....+.....+.+...++++.++...    ......|.++++.|++....++.......++     +.
T Consensus        17 ~e~~~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~----~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftf   92 (347)
T KOG1442|consen   17 EEMPVLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSL----VVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTF   92 (347)
T ss_pred             hhhHHHHHhhhchhhhccceeeeeehhhhhHHHHhhch----hhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceecc
Confidence            88999999999999988888888888888888887543    4677889999999999999888766443221     11


Q ss_pred             -----CCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhh
Q 020068           77 -----GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSF  151 (331)
Q Consensus        77 -----~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~  151 (331)
                           +-...++..|+++.+.++..++|.+|+|++++++.+-|+...+|+.+++++++|+|-+.....++++++.|..+-
T Consensus        93 p~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG  172 (347)
T KOG1442|consen   93 PSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG  172 (347)
T ss_pred             CcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec
Confidence                 223457899999999999999999999999999999999999999999999999999999999999999998876


Q ss_pred             ccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHH
Q 020068          152 ALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFE  231 (331)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  231 (331)
                      .-.|..       .+..++.|.++...|.++-|+..++.||..... +...+.+.+|+|..+.++++|..+  +.||+.+
T Consensus       173 vdqE~~-------~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v-~~~iw~lt~ynnv~a~lLflpll~--lnge~~~  242 (347)
T KOG1442|consen  173 VDQEGS-------TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPV-GDCIWRLTAYNNVNALLLFLPLLI--LNGEFQA  242 (347)
T ss_pred             cccccc-------cCccchhhhHHHHHHHHHHHHHHHhhheecccc-cCeehhhHHHHHHHHHHHHHHHHH--HcchHHH
Confidence            533322       246788999999999999999999998776544 556799999999999999999887  8899877


Q ss_pred             HHHHhhh-CchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHH
Q 020068          232 AIQFCKQ-HPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGL  310 (331)
Q Consensus       232 ~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv  310 (331)
                      -+.+.+. ....|..+.+.+++++.-.+.-.+-+|.+||+|+.+.++.|-....++++.+++|.-+...|-|-.++++|-
T Consensus       243 v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs  322 (347)
T KOG1442|consen  243 VVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGS  322 (347)
T ss_pred             HcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehh
Confidence            6655443 334555566667777766566677899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHhhhh
Q 020068          311 SYQIYLKWRKLQRLQKK  327 (331)
Q Consensus       311 ~~~~~~k~~~~~~~~~~  327 (331)
                      ..|.+.|.++.+|+...
T Consensus       323 ~~YT~vk~~em~~~~~~  339 (347)
T KOG1442|consen  323 LAYTLVKEHEMRKASAQ  339 (347)
T ss_pred             HHHHHHHHHHHHhhccC
Confidence            99999988776654433

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=9.7e-24  Score=193.13  Aligned_cols=256  Identities=13%  Similarity=0.111  Sum_probs=186.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHH-hhhHHhHhhhcc-cchhHHHHHhhcchHHHHHHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNT-IGPAMGIEALKY-ISYPAQVLAKSSKMIPVMLMGTL  127 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~-i~~~~~~~~ks~~pi~v~l~~~l  127 (331)
                      |..+++.|+.++++......  ++   ++.+++..+..++... ....+.+.+++| +|.+.+.++-++.|+++++++++
T Consensus        32 p~~~~~~R~~~a~~~l~~~~--~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~  106 (299)
T PRK11453         32 PLMLAGLRFMLVAFPAIFFV--AR---PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAF  106 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHh--cC---CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHH
Confidence            89999999988765544332  22   2334455555555433 344566788887 78888898999999999999999


Q ss_pred             hhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHH
Q 020068          128 VYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIML  207 (331)
Q Consensus       128 ~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~  207 (331)
                      ++|||+++++++++++.++|+.+...++.++       .+.+..|+++.+.+.++++.+.+.+||..++++.........
T Consensus       107 ~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-------~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~  179 (299)
T PRK11453        107 TFGERLQGKQLAGIALAIFGVLVLIEDSLNG-------QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVV  179 (299)
T ss_pred             HhcCcCcHHHHHHHHHHHHhHHHhccccCCC-------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHH
Confidence            9999999999999999999999887543211       123457999999999999999999998765442222223334


Q ss_pred             HHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHH-HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 020068          208 GMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCG-AVGQNFIFLTISRFGSLTNTTITTTRKFVSIVV  286 (331)
Q Consensus       208 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~i~~~sa~t~si~~~l~~v~till  286 (331)
                      +....+.+...+... ..+++..........++..|..+++.++.+ .+++.++++.+++.++.+.++...++|+++.++
T Consensus       180 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~  258 (299)
T PRK11453        180 WSALIPIIPFFVASL-ILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLAS  258 (299)
T ss_pred             HHHHHHHHHHHHHHH-HhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            444443332222211 022221111111223445677777887654 578889999999999999999999999999999


Q ss_pred             HHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          287 SSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       287 s~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      |++++||++++.+++|.++++.|+++..+.++
T Consensus       259 ~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        259 AALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999998877665

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.93  E-value=2.4e-23  Score=190.12  Aligned_cols=254  Identities=13%  Similarity=-0.001  Sum_probs=182.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHhhhHHhHhhhcc----cchhHHHHHhhcchHHHHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKY----ISYPAQVLAKSSKMIPVMLMG  125 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~----i~~~~~~~~ks~~pi~v~l~~  125 (331)
                      |..+.+.|+..+.++..+..  .+++.++.+++..+..++.......+.+.+++|    .+.....++.++.|+++++++
T Consensus        32 P~~~~~~R~~~a~l~l~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~  109 (295)
T PRK11689         32 PVGGAAMIYSVSGLLLLLTV--GFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFA  109 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHc--cccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHH
Confidence            88999999999887776542  222222333343444444455666677777765    566677889999999999999


Q ss_pred             HHhhccccCchhHHHHHHHhhhhhhhccccCCccccc-cCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhh
Q 020068          126 TLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTIS-KLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWD  204 (331)
Q Consensus       126 ~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~-~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~  204 (331)
                      .+++|||++++++.++++.++|+.++..++...+..+ +.+.+++..|+++.++|++++|.++++.||..+++   ++..
T Consensus       110 ~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~---~~~~  186 (295)
T PRK11689        110 VLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK---NGIT  186 (295)
T ss_pred             HHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC---Cchh
Confidence            9999999999999999999999999876542111000 00112345699999999999999999999875444   4443


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 020068          205 IMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSI  284 (331)
Q Consensus       205 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~ti  284 (331)
                      ..  . ..+.+...+...  ..++.     ....+++.|..+++.++.+.+++.++++++++.+|.++++..+++|++++
T Consensus       187 ~~--~-~~~~~~l~~~~~--~~~~~-----~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~  256 (295)
T PRK11689        187 LF--F-ILTALALWIKYF--LSPQP-----AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSA  256 (295)
T ss_pred             HH--H-HHHHHHHHHHHH--HhcCc-----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHH
Confidence            32  1 222222222222  22221     11123445656666777777899999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          285 VVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       285 lls~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      +++++++||++|+.+++|.++++.|+.+..+.++
T Consensus       257 i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        257 ALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999988765443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.93  E-value=6.1e-23  Score=187.24  Aligned_cols=281  Identities=12%  Similarity=0.103  Sum_probs=206.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC-CCCchHHHHHH
Q 020068            9 RRVLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSA-GGAPWWTYWSA   87 (331)
Q Consensus         9 ~~~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~   87 (331)
                      +|-+.++++.......+....+..+....        +. .|..+++.|+.++.++..++...+++++ ++++++.....
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--------~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~   74 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVIRIGVE--------SW-PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALI   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--------cC-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence            33445555555555555555555543321        22 3889999999999888776655443322 23344555566


Q ss_pred             HHHH-HhhhHHhHhhh-cccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCC
Q 020068           88 GITN-TIGPAMGIEAL-KYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLA  165 (331)
Q Consensus        88 ~~~~-~~~~~~~~~sl-~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~  165 (331)
                      |... .....+.+.+. ++++.+...++.++.|+++++++.+ +|||++++++.++++.++|+.+...++.         
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~---------  144 (292)
T PRK11272         75 GLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN---------  144 (292)
T ss_pred             HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc---------
Confidence            6654 35667778888 9999999999999999999999975 6999999999999999999998864321         


Q ss_pred             CCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHH
Q 020068          166 HPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWD  245 (331)
Q Consensus       166 ~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (331)
                      .+.+..|+++.+++.+++|.+.+..||..++    ++.....+...++.+...+...  ..++...    ...++..|..
T Consensus       145 ~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~  214 (292)
T PRK11272        145 LSGNPWGAILILIASASWAFGSVWSSRLPLP----VGMMAGAAEMLAAGVVLLIASL--LSGERLT----ALPTLSGFLA  214 (292)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHhcCCC----cchHHHHHHHHHHHHHHHHHHH--HcCCccc----ccCCHHHHHH
Confidence            1244679999999999999999998875321    2344556666777776666543  2222110    1113345666


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          246 IFFYCLC-GAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       246 i~~~~~~-~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      +.+.++. +.+++.++++++++.++.+.++...++|+++.++|++++||++|+.+++|.++++.|+.+.++.++
T Consensus       215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            6777765 458889999999999999999999999999999999999999999999999999999998776544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.92  E-value=1.4e-22  Score=185.17  Aligned_cols=280  Identities=8%  Similarity=-0.016  Sum_probs=191.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC----CCCchHH--H
Q 020068           11 VLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSA----GGAPWWT--Y   84 (331)
Q Consensus        11 ~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~----~~~~~~~--~   84 (331)
                      ..+..+..+.....+....+..+...         +.+ |..+++.|+.++.++...+...+++.+    +.+++++  .
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~~---------~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   75 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLIY---------YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM   75 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhc---------CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH
Confidence            34555555555555555555554431         233 789999999998876655443332211    0112233  2


Q ss_pred             HHH-HHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccccc
Q 020068           85 WSA-GITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISK  163 (331)
Q Consensus        85 ~~~-~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~  163 (331)
                      ..+ +........+.+++++++|++...++.++.|+++++++++++|||++++++.++++.++|+.+....+.       
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------  148 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------
Confidence            223 344556788999999999999999999999999999999999999999999999999999998864221       


Q ss_pred             CCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchH-
Q 020068          164 LAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEA-  242 (331)
Q Consensus       164 ~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (331)
                         +..    .+.+++.+++|.+.+.+||..++. ..+......+..+++.+...+.    ..... .   ....++.. 
T Consensus       149 ---~~~----~~~l~aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~---~~~~~~~~~  212 (296)
T PRK15430        149 ---SLP----IIALGLAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIYLFAI----ADSST-S---HMGQNPMSL  212 (296)
T ss_pred             ---Ccc----HHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHHHHH----ccCCc-c---cccCCcHHH
Confidence               111    356678899999998887653211 1122222333333333332211    11110 0   01112222 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHhH
Q 020068          243 AWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQ  322 (331)
Q Consensus       243 ~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~~  322 (331)
                      +..+...++.+.+++.++++++++.+|.++++..+++|++++++|++++||++|+.+++|+++++.|+.+.........|
T Consensus       213 ~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~~  292 (296)
T PRK15430        213 NLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQR  292 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            22334455567799999999999999999999999999999999999999999999999999999998887776655544


Q ss_pred             H
Q 020068          323 R  323 (331)
Q Consensus       323 ~  323 (331)
                      |
T Consensus       293 ~  293 (296)
T PRK15430        293 R  293 (296)
T ss_pred             h
Confidence            3

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.92  E-value=8.8e-23  Score=182.93  Aligned_cols=243  Identities=12%  Similarity=0.030  Sum_probs=190.8

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHH-HHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHH
Q 020068           47 FQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGIT-NTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMG  125 (331)
Q Consensus        47 f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~  125 (331)
                      ...|..+.+.|++.+.+...+....+   +++.+++.++..+.. ......+.+.|++|++.+...++.++.|+++++++
T Consensus        15 ~~~~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~   91 (260)
T TIGR00950        15 QVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLS   91 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHH
Confidence            34577888888888777665543322   334455556666654 56778889999999999999999999999999999


Q ss_pred             HHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhH
Q 020068          126 TLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDI  205 (331)
Q Consensus       126 ~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~  205 (331)
                      .+++|||++++++.++++.++|+.+...+++         .+.+..|+.+.+++.++++.+.+..|+..+++ +.++...
T Consensus        92 ~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~---------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~~~~~~~  161 (260)
T TIGR00950        92 DLMGKERPRKLVLLAAVLGLAGAVLLLSDGN---------LSINPAGLLLGLGSGISFALGTVLYKRLVKKE-GPELLQF  161 (260)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHhhccCCc---------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-CchHHHH
Confidence            9999999999999999999999999865432         13457899999999999999999999887655 3334444


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH-HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 020068          206 MLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC-GAVGQNFIFLTISRFGSLTNTTITTTRKFVSI  284 (331)
Q Consensus       206 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~i~~~sa~t~si~~~l~~v~ti  284 (331)
                      ..+.+.++.+...+...  ..++..      ..++..+..+++.+++ +.+++.++++++++.++.++++..+++|+++.
T Consensus       162 ~~~~~~~~~~~l~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~  233 (260)
T TIGR00950       162 TGWVLLLGALLLLPFAW--FLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVAL  233 (260)
T ss_pred             HHHHHHHHHHHHHHHHH--hcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence            44567777777777654  333211      1123344456666665 45888999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCchhhhhHhHHHHHH
Q 020068          285 VVSSVLSGNPLSSKQWGCVLMVFSGL  310 (331)
Q Consensus       285 lls~~~f~e~~t~~~~~G~~lv~~Gv  310 (331)
                      +++++++||++++.+++|+++++.|+
T Consensus       234 ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       234 LLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999986

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.92  E-value=2.1e-22  Score=183.76  Aligned_cols=271  Identities=10%  Similarity=-0.014  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHhh
Q 020068           15 AFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIG   94 (331)
Q Consensus        15 ~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (331)
                      +...+.-..++...+...+....        +++ |..+.+.|++++.++..++...++++.+++.++..+..|+.....
T Consensus        14 ~~~~~la~~~~~~~~~~~K~~~~--------~~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (293)
T PRK10532         14 ILLLLIAMASIQSGASLAKSLFP--------LVG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGM   84 (293)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHH--------HcC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHH
Confidence            33333334444455555555542        333 678999999999888776543333233344556677788777777


Q ss_pred             hHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHH
Q 020068           95 PAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYG  174 (331)
Q Consensus        95 ~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~  174 (331)
                      ..+.+.+++|+|.+.+.++.++.|+++++++    +||+++.  ..+.+.++|+.+....+.+.       ++.+..|++
T Consensus        85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~-------~~~~~~G~l  151 (293)
T PRK10532         85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDV-------SHVDLTGAA  151 (293)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCc-------ccCChHHHH
Confidence            8888999999999999999999999998776    3665544  45667789998776432111       134567999


Q ss_pred             HHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHH-
Q 020068          175 LCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCG-  253 (331)
Q Consensus       175 l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  253 (331)
                      +.+++.+++|.+.+..||..+++   ++... .+...++.+...++..  ..+.  +    ...++..+...++.++++ 
T Consensus       152 l~l~aa~~~a~~~v~~r~~~~~~---~~~~~-~~~~~~~~~~l~~~~~--~~~~--~----~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        152 LALGAGACWAIYILSGQRAGAEH---GPATV-AIGSLIAALIFVPIGA--LQAG--E----ALWHWSILPLGLAVAILST  219 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccC---CchHH-HHHHHHHHHHHHHHHH--HccC--c----ccCCHHHHHHHHHHHHHHH
Confidence            99999999999999998876544   44444 4556666666666544  2211  0    011233344455677654 


Q ss_pred             HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      .+++.++++++++.+|.++++..+++|+++.++|++++||++++.+++|.+++++|+..+.+..+|
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            577789999999999999999999999999999999999999999999999999999998766544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.90  E-value=8.3e-23  Score=170.44  Aligned_cols=292  Identities=15%  Similarity=0.089  Sum_probs=225.8

Q ss_pred             HHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHhhhHHhHhhh
Q 020068           23 SAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEAL  102 (331)
Q Consensus        23 ~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl  102 (331)
                      .+||..+++...-+|-..  +..+|+....+.+.|.+.+.+...+....+-.+.|....|+|+|+++..+.....+..||
T Consensus        12 lsYc~sSIlmTltNKyVl--s~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsL   89 (309)
T COG5070          12 LSYCFSSILMTLTNKYVL--SNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSL   89 (309)
T ss_pred             HHHHHHHHHHHHhhHhee--cCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccce
Confidence            567777777666555322  246777788999999998877665543333234446667889999999999999999999


Q ss_pred             cccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHH
Q 020068          103 KYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAF  182 (331)
Q Consensus       103 ~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~  182 (331)
                      +|+++|.++++|..+.|.+...+..++|+|.+-.+..+.++++..-....++|.+....   ....--.|++|+....+.
T Consensus        90 qyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~---~~~~lN~GY~Wm~~Ncls  166 (309)
T COG5070          90 QYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF---KAQILNPGYLWMFTNCLS  166 (309)
T ss_pred             eeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH---HhcccCCceEEEehhhHh
Confidence            99999999999999999999999999999999999999999999999999887643211   011223589999888888


Q ss_pred             hhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHH
Q 020068          183 DGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFL  262 (331)
Q Consensus       183 ~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  262 (331)
                      .+.+-...++..+ ..+....+.|+|.|+++.++...+.+  ...|..+.--.....++....+.+.++++..-.++.-|
T Consensus       167 saafVL~mrkri~-ltNf~d~dtmfYnNllslPiL~~~s~--~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saW  243 (309)
T COG5070         167 SAAFVLIMRKRIK-LTNFKDFDTMFYNNLLSLPILLSFSF--LFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAW  243 (309)
T ss_pred             HHHHHHHHHHhhc-ccccchhhHHHHhhhHHHHHHHHHHH--HhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccce
Confidence            8766655444333 22455688999999999999988776  33332221111122345555677778888776778889


Q ss_pred             HHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHhH
Q 020068          263 TISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQ  322 (331)
Q Consensus       263 ~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~~  322 (331)
                      +++.+|+.|.++++.+.+....+.|.++||+|.+...+..+.+-+.+..+|.+.|.+|++
T Consensus       244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999988888888888776544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.85  E-value=1.6e-19  Score=163.86  Aligned_cols=210  Identities=11%  Similarity=0.050  Sum_probs=153.0

Q ss_pred             HHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCC
Q 020068           86 SAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLA  165 (331)
Q Consensus        86 ~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~  165 (331)
                      ..+........+.+.++++.|.+....+.++.|+++.+++++++|||++++++.++++++.|+.+...++..        
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------  139 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--------
Confidence            344456677888899999999999999999999999999999999999999999999999999988754321        


Q ss_pred             CCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHH-HHHhhh-cCCCChHHHHHHhhhCchHH
Q 020068          166 HPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYN-LFYMFG-WPHGSGFEAIQFCKQHPEAA  243 (331)
Q Consensus       166 ~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  243 (331)
                       ..+..|+.+.+++.++++.+.+..|+..++.   ++.....+...++.+.. .+.... ...++..    . ...+..+
T Consensus       140 -~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~  210 (281)
T TIGR03340       140 -QHRRKAYAWALAAALGTAIYSLSDKAAALGV---PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS----M-FPYARQI  210 (281)
T ss_pred             -ccchhHHHHHHHHHHHHHHhhhhccccccch---hcccccHHHHHHHHHHHHHHHHHHHHHHhccc----h-hhhHHHH
Confidence             2345688889999999999998776653322   22111111222222222 222210 0111100    0 0111122


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHH
Q 020068          244 WDIFFY-CLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSY  312 (331)
Q Consensus       244 ~~i~~~-~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~  312 (331)
                      +...+. ++++.+++.++++++++.++.+.+...++.|++++++|++++||++|+.+++|.++++.|+.+
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            233334 456678999999999999999999999999999999999999999999999999999999874

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.82  E-value=4.7e-17  Score=147.43  Aligned_cols=247  Identities=16%  Similarity=0.153  Sum_probs=178.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc--cCCCCCchHH-HHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWS--SSAGGAPWWT-YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGT  126 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~  126 (331)
                      +....+.|.....+.........+  ..+.+.+++. .+..++.......+.+.++++++.+..+++.++.|+++.+++.
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            445556688777766332222221  1122223233 3344445667788889999999999999999999999999996


Q ss_pred             -HhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhH
Q 020068          127 -LVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDI  205 (331)
Q Consensus       127 -l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~  205 (331)
                       +++|||++++++.++++.+.|+.+...++..+.      .. ...|..+.+.+.+++|++.+.+|+.. +.   ++...
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~---~~~~~  184 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGG------IL-SLLGLLLALAAALLWALYTALVKRLS-RL---GPVTL  184 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCcch------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC---ChHHH
Confidence             777999999999999999999999987664321      01 46899999999999999999998776 33   34444


Q ss_pred             HH-HHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHH-HHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 020068          206 ML-GMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGA-VGQNFIFLTISRFGSLTNTTITTTRKFVS  283 (331)
Q Consensus       206 ~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~i~~~sa~t~si~~~l~~v~t  283 (331)
                      .. +..........+...    .+.    + .......+......++.+. +++.+++..+++.++...++...++|+.+
T Consensus       185 ~~~~~~~~~~~~~~~~~~----~~~----~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~  255 (292)
T COG0697         185 ALLLQLLLALLLLLLFFL----SGF----G-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFA  255 (292)
T ss_pred             HHHHHHHHHHHHHHHHHh----ccc----c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence            43 222211111111111    100    0 1112234555666776655 79999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHH
Q 020068          284 IVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       284 ills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      ++++++++||+++..+++|+++++.|+.+....
T Consensus       256 ~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         256 ALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999987766

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.81  E-value=2.9e-18  Score=151.42  Aligned_cols=221  Identities=19%  Similarity=0.212  Sum_probs=172.7

Q ss_pred             chHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcc
Q 020068           80 PWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSK  159 (331)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~  159 (331)
                      ...++.+.+++|...+.+.+.+++++|.+++++++.++++++.+++.+++|||.+++||.++++.++|+.+...++....
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~   95 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS   95 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence            34567788889999999999999999999999999999999999999999999999999999999999999887654432


Q ss_pred             ccccC-------CCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCC-hHH
Q 020068          160 TISKL-------AHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGS-GFE  231 (331)
Q Consensus       160 ~~~~~-------~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~  231 (331)
                      +.++.       .+.....|+++++++.+++|+.+++.||++|+. +.+.+........++.++.++... +..++ ..+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-~~s~~~~N~qL~~~gi~~~~~~~~-~~~~~~~~~  173 (244)
T PF04142_consen   96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-NVSLWIQNMQLYLFGILFNLLALL-LSDGSAISE  173 (244)
T ss_pred             ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHh-ccccccccc
Confidence            11110       123456899999999999999999999999987 677788778888888888877653 12111 111


Q ss_pred             HHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHH
Q 020068          232 AIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMV  306 (331)
Q Consensus       232 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv  306 (331)
                      .--|...++..|    ..-+..+++-+..-..+|+.|...-..+..+..+++.++|+++||.++|....+|..+|
T Consensus       174 ~g~f~G~~~~~~----~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  174 SGFFHGYSWWVW----IVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             CCchhhcchHHH----HHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            100111122222    22234445556777789999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=99.77  E-value=3.5e-16  Score=140.06  Aligned_cols=238  Identities=10%  Similarity=0.001  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccC------CC---CCc-hHHHHHH
Q 020068           18 VAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSS------AG---GAP-WWTYWSA   87 (331)
Q Consensus        18 ~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~------~~---~~~-~~~~~~~   87 (331)
                      .......+...++..+.+ .        +. .|..+++.|+++++++..++...++++      .+   +.+ +......
T Consensus         7 ~i~a~~~wg~~~~~~k~~-~--------~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         7 SLLASFLFGYMYYYSKLL-K--------PL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             HHHHHHHHHHHHHHHHHh-c--------cC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence            333334455556666542 1        22 378999999999887765544332211      01   111 1124455


Q ss_pred             HHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCC
Q 020068           88 GITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHP  167 (331)
Q Consensus        88 ~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~  167 (331)
                      ++....+..+.+.|+++++.+.++++.++.|+++++++.+++|||++++++.++++.++|+.+...++.          +
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~----------~  146 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG----------S  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC----------C
Confidence            666777888999999999999999999999999999999999999999999999999999998764221          1


Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCc-hHHHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHP-EAAWDI  246 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i  246 (331)
                      ..    .+.+++.+++|.+.+..||..+ .   +..+.... +....+...+...  ..+.. .   ....++ ..|..+
T Consensus       147 ~~----~~~l~aa~~~a~~~i~~~~~~~-~---~~~~~~~~-~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~~l  211 (256)
T TIGR00688       147 LP----WEALVLAFSFTAYGLIRKALKN-T---DLAGFCLE-TLSLMPVAIYYLL--QTDFA-T---VQQTNPFPIWLLL  211 (256)
T ss_pred             ch----HHHHHHHHHHHHHHHHHhhcCC-C---CcchHHHH-HHHHHHHHHHHHH--HhccC-c---ccccCchhHHHHH
Confidence            11    3467789999999988877532 2   22232221 2222222222211  11110 0   001122 245566


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh
Q 020068          247 FFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVL  290 (331)
Q Consensus       247 ~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~  290 (331)
                      +..++++.+++.+++.++++.+|.+.++..+++|+++++++.++
T Consensus       212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            67777777999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.74  E-value=3.3e-15  Score=134.34  Aligned_cols=231  Identities=15%  Similarity=0.168  Sum_probs=178.0

Q ss_pred             HHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccc
Q 020068           82 WTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTI  161 (331)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~  161 (331)
                      .+..+.++.|...+-+.+.++.++|.+++++....+...+.++..++++||.+++||.++++.+.|+.+.-.+..+...+
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a  172 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA  172 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence            34666777888888899999999999999999999999999999999999999999999999999999987433322211


Q ss_pred             c-cCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHH--HHHhhh
Q 020068          162 S-KLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEA--IQFCKQ  238 (331)
Q Consensus       162 ~-~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~  238 (331)
                      . +....+.+.|+..++.+.+.+|+.+++-||++|+. +.+.+-...-...++.+..+...+  .. |....  ..+.+.
T Consensus       173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s-~~s~wi~NiqL~~~g~~f~~l~~~--~~-d~~~i~~~gff~G  248 (345)
T KOG2234|consen  173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS-NVSLWIRNIQLYFFGILFNLLTIL--LQ-DGEAINEYGFFYG  248 (345)
T ss_pred             cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHHh--hc-cccccccCCcccc
Confidence            1 23346678999999999999999999999999876 666666666777777777766554  21 21111  011111


Q ss_pred             Cc-hHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHH
Q 020068          239 HP-EAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLK  317 (331)
Q Consensus       239 ~~-~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k  317 (331)
                      +. ..|..+    +...++-++.-..+|+.+...-.-+..+-.+++.+.|+.+||.++|..-.+|+.+|+.++..|...+
T Consensus       249 ~s~~vw~vV----l~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P  324 (345)
T KOG2234|consen  249 YSSIVWLVV----LLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYP  324 (345)
T ss_pred             ccHHHHHHH----HHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCC
Confidence            11 222222    2334444666778899898888888888999999999999999999999999999999999999655


Q ss_pred             HHH
Q 020068          318 WRK  320 (331)
Q Consensus       318 ~~~  320 (331)
                      .+.
T Consensus       325 ~~~  327 (345)
T KOG2234|consen  325 ARD  327 (345)
T ss_pred             ccc
Confidence            543

>TIGR00803 nst UDP-galactose transporter

Probab=99.73  E-value=2.5e-17  Score=144.33  Aligned_cols=204  Identities=20%  Similarity=0.230  Sum_probs=146.4

Q ss_pred             cchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcc------------ccc-----cCCCC
Q 020068          105 ISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSK------------TIS-----KLAHP  167 (331)
Q Consensus       105 i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~------------~~~-----~~~~~  167 (331)
                      +++|.++.+|+.+|+++++.+....+||++..|+++.+++..|+......|.+..            +.+     ....+
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            6789999999999999999999999999999999999999999997665543210            000     01123


Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIF  247 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (331)
                      +.+.|..+.+.+..++++.++++|+.+|++ +.+.+.......+++.+....... ...++......+.+.+|..   .+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG-DTMFWSRNLQLPLFGLFSTFSVLL-WSDGTLISNFGFFIGYPTA---VW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCC-CCchHHHHHHHHHHHHHHHHHHHh-hcccchhhccCcccCCchH---HH
Confidence            457788889999999999999999987654 333333333333333332222111 0111211111111222332   23


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          248 FYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      ...+++..++.+..+.+|+.|+.+.+++.++|++++.++|+++|||+++..+++|+.+++.|+++|
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            344566777788999999999999999999999999999999999999999999999999997654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.71  E-value=2.9e-16  Score=129.32  Aligned_cols=142  Identities=15%  Similarity=0.184  Sum_probs=118.4

Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHhhC----CCCChhhHHHHHHHHHHHHHHHHhhhcCCCChH--HHHHHhhh-----Cc
Q 020068          172 GYGLCFLNLAFDGFTNATQDSITARY----PKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGF--EAIQFCKQ-----HP  240 (331)
Q Consensus       172 G~~l~l~a~~~~a~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~-----~~  240 (331)
                      |+++++.|.++.|++++++|+.+++.    .+.++.++++|+++.+.+..+|..+  ..++..  +.......     ++
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~--~~e~~~~~~~~~~~~~~~~~~~~   78 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAF--LLEGPQLSSFFSEIFGEELSSDP   78 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHH--HHhhhhhhhHHHHhhhhhhcchH
Confidence            78899999999999999999998873    3789999999999999999999876  322221  11111111     23


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHH
Q 020068          241 EAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIY  315 (331)
Q Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~  315 (331)
                      ..+..++..++.+.+.++..+.+++++||++.++++.+|++.++++|+++|||++|+.+++|+++.+.|+..|+|
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            445566667778888999999999999999999999999999999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.71  E-value=4.7e-18  Score=145.82  Aligned_cols=259  Identities=15%  Similarity=0.093  Sum_probs=192.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCC-CCCc-hHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSA-GGAP-WWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL  127 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l  127 (331)
                      |..+.-.|+++-.++.++.....+... .+.+ .+.++.++++...+..+.++|++|++.+-++++-.++|+++.+++++
T Consensus        64 p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~  143 (346)
T KOG4510|consen   64 PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWA  143 (346)
T ss_pred             hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHH
Confidence            344555555555544444333322111 1122 23356788888888999999999999999999999999999999999


Q ss_pred             hhccccCchhHHHHHHHhhhhhhhcccc-----CCccccccCCC-CCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCC
Q 020068          128 VYGIRYTLPEYICTLLVAGGVSSFALMK-----TSSKTISKLAH-PNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTS  201 (331)
Q Consensus       128 ~~~e~~~~~~~~~~~~i~~Gv~l~~~~~-----~~~~~~~~~~~-~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~  201 (331)
                      ++||+++..+.++..+...|++++..++     +.+.  ++.+. +.+..|....+.+.+..|..++..+++-|+   .+
T Consensus       144 ~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g--~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~---~h  218 (346)
T KOG4510|consen  144 FLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG--EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN---AH  218 (346)
T ss_pred             HHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc--cccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc---cc
Confidence            9999999999999999999999987643     1111  11111 345678888888888888778887776553   45


Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 020068          202 AWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKF  281 (331)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v  281 (331)
                      ..-.+.|..+++.+..++...  ..|++.    ..+ ....|+...-+|+.++.+|++....+++--|...++..+..-+
T Consensus       219 ~~msvsyf~~i~lV~s~I~~~--~ig~~~----lP~-cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvv  291 (346)
T KOG4510|consen  219 AIMSVSYFSLITLVVSLIGCA--SIGAVQ----LPH-CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVV  291 (346)
T ss_pred             EEEEehHHHHHHHHHHHHHHh--hcccee----cCc-cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHH
Confidence            666678889999888887664  334321    111 1223445566788999999999999988888889999999999


Q ss_pred             HHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHH
Q 020068          282 VSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRK  320 (331)
Q Consensus       282 ~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~  320 (331)
                      ++.++-+++|||.+|++.|.|+++++.+..+....|.-+
T Consensus       292 fAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  292 FAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             HHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence            999999999999999999999999999988776665443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.70  E-value=4.3e-15  Score=128.48  Aligned_cols=289  Identities=12%  Similarity=0.090  Sum_probs=204.5

Q ss_pred             HHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccC--------------CCCCchH--HHHH
Q 020068           23 SAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSS--------------AGGAPWW--TYWS   86 (331)
Q Consensus        23 ~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~--------------~~~~~~~--~~~~   86 (331)
                      .+-..+.+..|+-...+ .++..+|++|..-+..-|+.-.++...+...+.+.              .++.|.+  .+++
T Consensus        13 vsGs~Ntl~aKwadsi~-~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~   91 (372)
T KOG3912|consen   13 VSGSFNTLVAKWADSIQ-AEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP   91 (372)
T ss_pred             hhccHHHHHHHHHHhhh-hhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence            33344555555554322 11234599997777666665555554443332210              1122443  3567


Q ss_pred             HHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCC
Q 020068           87 AGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAH  166 (331)
Q Consensus        87 ~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~  166 (331)
                      .+++-..+..+.|.+|.+.+.+.++++|-.-.|||-+++.-+++++.+.+||+++..+.+|+++....|...+++.-...
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            88999999999999999999999999999999999999999999999999999999999999998876532221111112


Q ss_pred             CCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhh---cCCCC---------hHH---
Q 020068          167 PNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFG---WPHGS---------GFE---  231 (331)
Q Consensus       167 ~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~---------~~~---  231 (331)
                      +....|+++++.+-+.-|+..++.||..+++ +.+|.+..-|-..++.+++....+.   .+.++         +.+   
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~  250 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGD  250 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHH
Confidence            3457899999999999999999999999998 8999999999998885554433321   12231         111   


Q ss_pred             HHHHhhhCchHHHHHHHHHHHH--HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHH
Q 020068          232 AIQFCKQHPEAAWDIFFYCLCG--AVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSG  309 (331)
Q Consensus       232 ~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~G  309 (331)
                      .+...+..|..  .+...+...  ++-+..-....|..||.|-.+.-.+|..+.-+++.....|.+...|+.|.++.+.|
T Consensus       251 ~~~~~~e~p~l--~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~G  328 (372)
T KOG3912|consen  251 AFAALQESPSL--AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMG  328 (372)
T ss_pred             HHHHhcCCchh--HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111222221  122222221  12233445678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 020068          310 LSYQIY  315 (331)
Q Consensus       310 v~~~~~  315 (331)
                      +.+|.-
T Consensus       329 i~lY~~  334 (372)
T KOG3912|consen  329 IILYNQ  334 (372)
T ss_pred             HHHHHH
Confidence            998863

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.68  E-value=2.9e-14  Score=129.76  Aligned_cols=212  Identities=13%  Similarity=0.140  Sum_probs=154.8

Q ss_pred             HHHHhhhHHhHhhhcccchhHHHHHhh-cchHHHHHHHHHhhccccCchh----HHHHHHHhhhhhhhccccCCcccccc
Q 020068           89 ITNTIGPAMGIEALKYISYPAQVLAKS-SKMIPVMLMGTLVYGIRYTLPE----YICTLLVAGGVSSFALMKTSSKTISK  163 (331)
Q Consensus        89 ~~~~~~~~~~~~sl~~i~~~~~~~~ks-~~pi~v~l~~~l~~~e~~~~~~----~~~~~~i~~Gv~l~~~~~~~~~~~~~  163 (331)
                      +....++.+.+.|.++++++.+..+-+ ..++.+.+.+.+++||+.++++    +.+++++++|+++....++++.+++ 
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~-  145 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIK-  145 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccc-
Confidence            345677889999999999999977777 7788889999999999999999    9999999999999876543221100 


Q ss_pred             CCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHH
Q 020068          164 LAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAA  243 (331)
Q Consensus       164 ~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (331)
                       +..+...|+++.++|.++++.+....|+.     +.+|.+..+....--.+.......  ...+ .+.  .   .++..
T Consensus       146 -~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-~~~--~---~~~~~  211 (290)
T TIGR00776       146 -SEFNFKKGILLLLMSTIGYLVYVVVAKAF-----GVDGLSVLLPQAIGMVIGGIIFNL--GHIL-AKP--L---KKYAI  211 (290)
T ss_pred             -cccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCcceehhHHHHHHHHHHHHHHH--HHhc-ccc--h---HHHHH
Confidence             00223679999999999999998887753     236666643333311111111111  1100 000  0   11222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhh----hhHhHHHHHHHHHHH
Q 020068          244 WDIFFYCLCGAVGQNFIFLTIS-RFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQW----GCVLMVFSGLSYQIY  315 (331)
Q Consensus       244 ~~i~~~~~~~~~~~~~~~~~i~-~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~----~G~~lv~~Gv~~~~~  315 (331)
                      +.....++...+++.+++...+ +.++.++++..+.+|+.+.++|++++||+.++.|+    +|.++++.|+.+...
T Consensus       212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            2233366666788888889999 99999999999999999999999999999999999    999999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.66  E-value=2.7e-14  Score=122.09  Aligned_cols=246  Identities=11%  Similarity=0.055  Sum_probs=188.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhh
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVY  129 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~  129 (331)
                      |.-++..|...++++.....+-|+++..+.+++..+..|.+...++.++|.|++.+|.++++.+-.+-|+.+.+++    
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----  115 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----  115 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----
Confidence            5688999999998888776666666666778888899999999999999999999999999999999998876654    


Q ss_pred             ccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHH
Q 020068          130 GIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGM  209 (331)
Q Consensus       130 ~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~  209 (331)
                      .||  .++.+.+.+.+.|+.+..-...+.       ++.|..|..+.+.+..||+.|.+..+|.-+.   .+..+-+-.-
T Consensus       116 sRr--~~d~vwvaLAvlGi~lL~p~~~~~-------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~---~~g~~g~a~g  183 (292)
T COG5006         116 SRR--LRDFVWVALAVLGIWLLLPLGQSV-------WSLDPVGVALALGAGACWALYIVLGQRAGRA---EHGTAGVAVG  183 (292)
T ss_pred             ccc--hhhHHHHHHHHHHHHhheeccCCc-------CcCCHHHHHHHHHHhHHHHHHHHHcchhccc---CCCchHHHHH
Confidence            343  456677778888888776433221       3578899999999999999999998887642   2334444555


Q ss_pred             HHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHH-HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 020068          210 NLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGA-VGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSS  288 (331)
Q Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~  288 (331)
                      ..++.++.+|+-.  ...+      ....+|.....-+..++++. +-+.+.-.++++.++.+.++...++|.++.+.++
T Consensus       184 m~vAaviv~Pig~--~~ag------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~  255 (292)
T COG5006         184 MLVAALIVLPIGA--AQAG------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGL  255 (292)
T ss_pred             HHHHHHHHhhhhh--hhcc------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHH
Confidence            6667777766543  1111      11234555555556666654 6667788899999999999999999999999999


Q ss_pred             HhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          289 VLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       289 ~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      +++||.+|+.||.|++.++.+..-.++.-+|
T Consensus       256 i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         256 IFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            9999999999999999999987765554443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.65  E-value=4.8e-13  Score=117.32  Aligned_cols=251  Identities=14%  Similarity=0.050  Sum_probs=170.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCchH--HHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSA-----GGAPWW--TYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVM  122 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~  122 (331)
                      +..+..-|.+.+..+....+...|+.+     .++|.+  .....+..-..+-+...+|...=.+-.+.+-....|++.+
T Consensus        34 ~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~V  113 (293)
T COG2962          34 ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNV  113 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHH
Confidence            456777787777777666554443321     123322  1222232333333455567776444455667778899999


Q ss_pred             HHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCCh
Q 020068          123 LMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSA  202 (331)
Q Consensus       123 l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~  202 (331)
                      +++.+++|||.++-|++++++..+||..-.+...          +..+..+.+++    .+++|....|++     +.++
T Consensus       114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g----------~lpwval~la~----sf~~Ygl~RK~~-----~v~a  174 (293)
T COG2962         114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG----------SLPWVALALAL----SFGLYGLLRKKL-----KVDA  174 (293)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC----------CCcHHHHHHHH----HHHHHHHHHHhc-----CCch
Confidence            9999999999999999999999999998887543          45666665544    466666555433     3444


Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 020068          203 WDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCK-QHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKF  281 (331)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v  281 (331)
                      .+-+.-=.++-.+..+.+.+ +...+..    +.. +++..+..+...|..+++.-.++..+-++.+-.+.++..+++|.
T Consensus       175 ~~g~~lE~l~l~p~al~yl~-~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Pt  249 (293)
T COG2962         175 LTGLTLETLLLLPVALIYLL-FLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPT  249 (293)
T ss_pred             HHhHHHHHHHHhHHHHHHHH-HHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            44332222233333333332 1111111    222 34555556667777888888888889999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHhHHh
Q 020068          282 VSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQRL  324 (331)
Q Consensus       282 ~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~~~~  324 (331)
                      ...+++++++||+++..++...+++-.|+.++.+..-++++|+
T Consensus       250 l~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~  292 (293)
T COG2962         250 LMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKK  292 (293)
T ss_pred             HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999887766654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.60  E-value=2.6e-15  Score=134.97  Aligned_cols=224  Identities=12%  Similarity=0.058  Sum_probs=174.1

Q ss_pred             HHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCC
Q 020068           89 ITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPN  168 (331)
Q Consensus        89 ~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~  168 (331)
                      ..-+..+.++|.||.|.+++..+++-+++-.|+..++.++..||+++.+.+++++.+.|+++.+++|..+.  ++..+..
T Consensus       167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~--~~~~a~~  244 (416)
T KOG2765|consen  167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN--SDLPASR  244 (416)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc--ccCCccc
Confidence            34556889999999999999999999999999999999999999999999999999999999999875432  1222345


Q ss_pred             CchhHHHHHHHHHHhhhchHHHHHHHhhC-CCCChhhHHHHHHHHHHHHHHHHhhhc-CCCChHHHHHHhhhCchHHHHH
Q 020068          169 APLGYGLCFLNLAFDGFTNATQDSITARY-PKTSAWDIMLGMNLWGTIYNLFYMFGW-PHGSGFEAIQFCKQHPEAAWDI  246 (331)
Q Consensus       169 ~~~G~~l~l~a~~~~a~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  246 (331)
                      ...|.++.+++++.+|.|.+..||-..++ .+.+.....-|..++..+++.|..+++ ..+  .|.++.. ...+ ...+
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~--~e~F~lP-~~~q-~~~v  320 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG--EERFELP-SSTQ-FSLV  320 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc--cCcccCC-CCce-eEee
Confidence            68999999999999999999888766555 245555556677777777777655421 011  1111111 1111 1233


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          247 FFYCL-CGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       247 ~~~~~-~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      +..++ ...++-++|-.+.-.++|+++.+..++....+++...++-|+++|+.+++|.+.|++|-...++..+
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            44444 4457889999999999999999999999999999999999999999999999999999887666543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.45  E-value=1.1e-14  Score=124.48  Aligned_cols=254  Identities=11%  Similarity=0.080  Sum_probs=186.4

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHH
Q 020068           47 FQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGT  126 (331)
Q Consensus        47 f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~  126 (331)
                      .+.|..-+|.....-+++=..+..++ ++.-+..|+.|+.+++.-+-++.+-..|.||.+....+++.+-..+.++++++
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR-~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw  123 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFR-RKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSW  123 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhh-hHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHH
Confidence            33465666666544443333334343 23334568889999988888888888999999999889999988888999999


Q ss_pred             HhhccccCchhHHHHHHHhhhhhhhccccCCccccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHH
Q 020068          127 LVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIM  206 (331)
Q Consensus       127 l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~  206 (331)
                      +++|.||.+.++.++++...|+.+....|-...  +...+.+...|+.+.++.+-++|..++.+|.+.|+   .+..|+|
T Consensus       124 ~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag--d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn---~d~~elm  198 (336)
T KOG2766|consen  124 FFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG--DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN---ADRVELM  198 (336)
T ss_pred             HHHHHHHhhheeeeEEeEecceEEEEEeeeccc--cccCCCCCccCcEEEEecceeeeeccccHHHHHhc---CcHHHHH
Confidence            999999999999999999999999888764321  11224567889999999999999999999988874   4789999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 020068          207 LGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVV  286 (331)
Q Consensus       207 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~till  286 (331)
                      -...++++++..+-.+  .+..-.   ...+++...... +..+++-++-+.+.-..+|..||...++.....+..++++
T Consensus       199 ~~lgLfGaIIsaIQ~i--~~~~~~---~tl~w~~~i~~y-l~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i  272 (336)
T KOG2766|consen  199 GFLGLFGAIISAIQFI--FERHHV---STLHWDSAIFLY-LRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI  272 (336)
T ss_pred             HHHHHHHHHHHHHHHh--hhccce---eeEeehHHHHHH-HHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH
Confidence            9999999999876533  211100   111112111111 1122232333344556788999988888888889999988


Q ss_pred             HHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          287 SSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       287 s~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                        -.||-+++|+..+..+.+..|.++|.
T Consensus       273 --~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  273 --RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             --HHHhcchhhhhHHHHHHHHHhhEEee
Confidence              77888899999999999999999984

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.06  E-value=1.8e-09  Score=85.02  Aligned_cols=123  Identities=13%  Similarity=0.116  Sum_probs=96.2

Q ss_pred             HhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH-HHHHHHHH
Q 020068          182 FDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC-GAVGQNFI  260 (331)
Q Consensus       182 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  260 (331)
                      ++|.+.+..|+..++   .++.+..++....+.+ .++...  ......    ....++..+......++. +.+++.++
T Consensus         2 ~~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLL--ILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             eeeeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHH--hhcccc----ccCCChhhhhhhhHhhccceehHHHHH
Confidence            577888888888764   4899999999999987 554443  211110    112233444455566655 57888999


Q ss_pred             HHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          261 FLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       261 ~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      ++++++.++...++...++|+++.++++++++|++++.+++|+++++.|+.+..
T Consensus        72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.97  E-value=2.6e-09  Score=82.36  Aligned_cols=133  Identities=14%  Similarity=0.129  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH
Q 020068          173 YGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC  252 (331)
Q Consensus       173 ~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (331)
                      .++.++|++++++..++.|-=.+   +.||.-.++--+....+......+  ..|+....   ...++..|..+.+.++.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~---~vdp~~At~IRtiVi~~~l~~v~~--~~g~~~~~---~~~~~k~~lflilSGla   76 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE---GVDPDFATTIRTIVILIFLLIVLL--VTGNWQAG---GEIGPKSWLFLILSGLA   76 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc---ccCccHHHHHHHHHHHHHHHHHHH--hcCceecc---cccCcceehhhhHHHHH
Confidence            46788999999999888864433   457766666667766666665555  55653321   11356677778888888


Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          253 GAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       253 ~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      +..+-+++|++++.-.+....+..-..+++++++|++++||++|..+|+|+.++..|+.+.
T Consensus        77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            8899999999999999999999999999999999999999999999999999999997653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.92  E-value=1.2e-08  Score=79.59  Aligned_cols=101  Identities=19%  Similarity=0.213  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHHhccC------CCCCchHHHHHHHHHHH-hhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHh
Q 020068           56 AQNVVCLIWSYIMLKLWSSS------AGGAPWWTYWSAGITNT-IGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV  128 (331)
Q Consensus        56 ~q~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~  128 (331)
                      +|++.+.++...+...+++.      .+++++......++... .+..+.+.|+++.+ +....+.++.|+++++++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            46666666665554443321      12345555555566654 77889999999999 577799999999999999999


Q ss_pred             hccccCchhHHHHHHHhhhhhhhccccCC
Q 020068          129 YGIRYTLPEYICTLLVAGGVSSFALMKTS  157 (331)
Q Consensus       129 ~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~  157 (331)
                      +|||++++++.+++++.+|+++..++|.+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999987653

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.89  E-value=3.9e-07  Score=80.79  Aligned_cols=211  Identities=15%  Similarity=0.163  Sum_probs=142.4

Q ss_pred             HHHHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHHHHHHhhccccCchhHH----HHHHHhhhhhhhccccCCc
Q 020068           84 YWSAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVMLMGTLVYGIRYTLPEYI----CTLLVAGGVSSFALMKTSS  158 (331)
Q Consensus        84 ~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l~~~l~~~e~~~~~~~~----~~~~i~~Gv~l~~~~~~~~  158 (331)
                      -+..|++...+....+.|.+++.+|...=+ -....+.+.+++.++++|..+..++.    +++++++|+.+.+..|.++
T Consensus        48 ~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~  127 (269)
T PF06800_consen   48 AFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS  127 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            345566777888999999998544322211 12335667889999999999988766    8889999999999877654


Q ss_pred             cccccCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhh
Q 020068          159 KTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (331)
                      ++.  .+..+...|++.++++.+.+..|....+ .   . +.++++..+=...-..+..+.+..  ...+     .+  .
T Consensus       128 ~~~--~~~~~~~kgi~~Ll~stigy~~Y~~~~~-~---~-~~~~~~~~lPqaiGm~i~a~i~~~--~~~~-----~~--~  191 (269)
T PF06800_consen  128 DKS--SSKSNMKKGILALLISTIGYWIYSVIPK-A---F-HVSGWSAFLPQAIGMLIGAFIFNL--FSKK-----PF--F  191 (269)
T ss_pred             ccc--ccccchhhHHHHHHHHHHHHHHHHHHHH-h---c-CCChhHhHHHHHHHHHHHHHHHhh--cccc-----cc--c
Confidence            311  1123445799999999999888877754 2   2 567877765443333333333322  1111     01  1


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchh----hhhHhHHHHHHH
Q 020068          239 HPEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQ----WGCVLMVFSGLS  311 (331)
Q Consensus       239 ~~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~----~~G~~lv~~Gv~  311 (331)
                      +...|.. ..-++.=.+++++++...++.|..+.=..+-+..+++.+.+.++++|+=+..+    ++|.++++.|..
T Consensus       192 ~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  192 EKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             ccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            1222222 23444445788888999999999999999999999999999999999877654    457777777754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.87  E-value=9.9e-09  Score=80.78  Aligned_cols=117  Identities=17%  Similarity=0.209  Sum_probs=89.3

Q ss_pred             HHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccC----CCCCchHHHHHHHHH-HHhhhHHhHh
Q 020068           26 IYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSS----AGGAPWWTYWSAGIT-NTIGPAMGIE  100 (331)
Q Consensus        26 ~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~  100 (331)
                      ..+.++.+...+        ++ .|...++.|+..+.+ ........+++    .+...+......+.. ...+..+.+.
T Consensus         4 a~~~~~~k~~~~--------~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    4 AIYSVFSKKLLK--------KI-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             eeHHHHHHHHhc--------cC-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            345556666653        23 377899999999887 44443333221    122333445556665 5778899999


Q ss_pred             hhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068          101 ALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus       101 sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      ++++++.+...++.++.|+++.+++++++||+++++++.+++++++|+.+..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.78  E-value=3.9e-07  Score=83.33  Aligned_cols=140  Identities=15%  Similarity=0.156  Sum_probs=105.5

Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIF  247 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (331)
                      ....|.++.+++.++++......|.. .   +.+|.++.++...++.+...+...  ..++..+ .....+++..+....
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---~~~~~~~~~~R~~~a~~~l~~~~~--~~~~~~~-~~~~~~~~~~~~~~~   77 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---YVPADEILTHRVIWSFFFMVVLMS--ICRQWSY-LKTLIQTPQKIFMLA   77 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c---CCCHHHHHHHHHHHHHHHHHHHHH--HHccHHH-HHHHHcCHHHHHHHH
Confidence            34679999999999999999888643 2   468999999999999887766553  2232211 111111232222222


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          248 FYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      ..++.....+.++++++++.++..+++.....|+++.++++++++|+++..+|+|+++.+.|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            2223344667889999999999999999999999999999999999999999999999999988754

>TIGR00688 rarD rarD protein

Probab=98.78  E-value=3.2e-07  Score=82.04  Aligned_cols=138  Identities=14%  Similarity=0.087  Sum_probs=104.6

Q ss_pred             hhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhh-hCc-hHHHHHHH
Q 020068          171 LGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCK-QHP-EAAWDIFF  248 (331)
Q Consensus       171 ~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~~  248 (331)
                      .|.++.+++.++++......|. ..   +.+|.++.++-..++.+...+...  ..++..+...... .+. +.+.....
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~---~~~~~~i~~~R~~~a~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK---PLPATDILGHRMIWSFPFMLLSVT--LFRQWAALIERLKRIQKRPLILSLLL   75 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc---cCCHHHHHHHHHHHHHHHHHHHHH--HHcchHHHHHHHhCcccchHHHHHHH
Confidence            4888999999999999998875 32   468999999999999888766543  2222111101111 111 11223444


Q ss_pred             HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          249 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       249 ~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      .+++....+.+++++++++++.++++.....|+++.+++.++++|+++..++.|+++.+.|+.+-.
T Consensus        76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            555556777889999999999999999999999999999999999999999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.56  E-value=2.1e-06  Score=80.39  Aligned_cols=136  Identities=11%  Similarity=-0.016  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhcc-C-CCCC---chH--HHHH
Q 020068           14 LAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSS-S-AGGA---PWW--TYWS   86 (331)
Q Consensus        14 ~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~-~-~~~~---~~~--~~~~   86 (331)
                      .....++--+++..+.++++...+        +++.+...++.+++++.+...+......+ + ....   ...  ..+.
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~--------~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y  261 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMS--------EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVT  261 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH--------HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHH
Confidence            344444445566677778877643        45445567777877766655443333211 1 1111   111  1222


Q ss_pred             HHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCC
Q 020068           87 AGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTS  157 (331)
Q Consensus        87 ~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~  157 (331)
                      .++....+..+.|+++++++.+...++....|++.+++++++++|++++.++++.++++.|+.+...++.+
T Consensus       262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            23333456678899999999999999999999999999999999999999999999999999998865443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.54  E-value=1.1e-06  Score=79.70  Aligned_cols=133  Identities=10%  Similarity=-0.004  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH
Q 020068          173 YGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC  252 (331)
Q Consensus       173 ~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (331)
                      +++.+.+++++|...+..||..++.   ++  ..++....+.+...|+..  ....  + .++...+.+.+...+..++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~--~~~~~~~~~~~~l~~~~~--~~~~--~-~~~~~~~~~~~~~~~~~~~~   72 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE---PD--FLWWALLAHSVLLTPYGL--WYLA--Q-VGWSRLPATFWLLLAISAVA   72 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch---hH--HHHHHHHHHHHHHHHHHH--Hhcc--c-CCCCCcchhhHHHHHHHHHH
Confidence            4567889999999998887665432   23  346666666666666553  1100  0 00111112223333444445


Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHH
Q 020068          253 GAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIY  315 (331)
Q Consensus       253 ~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~  315 (331)
                      ....+.+.+.+.++.++...++..+..|+++.+++++++||++|..+|+|+++++.|+.+-..
T Consensus        73 ~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        73 NMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            567778889999999999999999999999999999999999999999999999999887553

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.47  E-value=2.3e-06  Score=66.21  Aligned_cols=103  Identities=21%  Similarity=0.305  Sum_probs=80.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHH
Q 020068           50 LAFLNLAQNVVCLIWSYIMLKLWSSSA-----GGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLM  124 (331)
Q Consensus        50 p~~lt~~q~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~  124 (331)
                      |.+-|++|.++..+++.......++..     +++.|--...-|+....+-.+++.+++-=++|.-.-+..++|+++.++
T Consensus        31 p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~ll  110 (140)
T COG2510          31 PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLL  110 (140)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHH
Confidence            678899999998888877766655321     233333333444455566778889999877777777888899999999


Q ss_pred             HHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068          125 GTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus       125 ~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      +++++|||++.++|++++++++|+.+.+
T Consensus       111 s~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510         111 SILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999998765

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.39  E-value=2.3e-06  Score=71.25  Aligned_cols=218  Identities=12%  Similarity=0.009  Sum_probs=147.4

Q ss_pred             HHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccccc
Q 020068           84 YWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISK  163 (331)
Q Consensus        84 ~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~  163 (331)
                      ..|-+++..+.++.+..+|+.++.+.++.+.++.-.+|.+++++.+|+|+...++++.++...|+++.++.|...     
T Consensus        56 taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-----  130 (290)
T KOG4314|consen   56 TAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-----  130 (290)
T ss_pred             ecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-----
Confidence            345566667788899999999999999999999999999999999999999999999999999999999877532     


Q ss_pred             CCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHH----HHhhhcCCCChHHHHHHhhhC
Q 020068          164 LAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNL----FYMFGWPHGSGFEAIQFCKQH  239 (331)
Q Consensus       164 ~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~  239 (331)
                         ...+.|+.+...|+.+.|+|-+.-|+...+   .+--+...+++..+..-..    |..+..+++  .|.++.....
T Consensus       131 ---a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn---An~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~--VE~~qsFA~~  202 (290)
T KOG4314|consen  131 ---ADEIIGIACAVGSAFMAALYKVLFKMFIGN---ANFGDAAHFMSCLGFFNLCFISFPALILAFTG--VEHLQSFAAA  202 (290)
T ss_pred             ---hhhhhhHHHHHHHHHHHHHHHHHHHHHhcc---CcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc--hHHHHHHhhC
Confidence               467899999999999999999888776542   2333444444444433222    111100122  1221111111


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHH
Q 020068          240 PEAAWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      |  |..+...+..+..-+..+...+..+.|...|+-.............+.-+-.++.....|..++..|-.+-..+
T Consensus       203 P--WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  203 P--WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             C--chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            1  22232222222222344555667777777777666555555666665555588889999999999997765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.35  E-value=1.5e-05  Score=71.09  Aligned_cols=130  Identities=14%  Similarity=0.138  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCC--CchHHHHHHHH
Q 020068           12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGG--APWWTYWSAGI   89 (331)
Q Consensus        12 ~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~   89 (331)
                      .+..+..+.--.++..+.++.++..+. .     + +.+...+..++..+.++..+.....+++...  ..+...+..++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~-~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKK-E-----G-PELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGL  199 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhc-C-----C-chHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHH
Confidence            344444555556666677777666431 1     1 1123445567888777776654443322211  12222344454


Q ss_pred             H-HHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhh
Q 020068           90 T-NTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGV  148 (331)
Q Consensus        90 ~-~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv  148 (331)
                      . ...+..+.+.++++++.+...++.++.|++.+++++++++|+++.+++.+..+++.|+
T Consensus       200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            4 4567888999999999999999999999999999999999999999999999999986

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.35  E-value=5.8e-07  Score=81.99  Aligned_cols=224  Identities=14%  Similarity=0.122  Sum_probs=121.6

Q ss_pred             HHHHH-HHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCcccccc
Q 020068           85 WSAGI-TNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISK  163 (331)
Q Consensus        85 ~~~~~-~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~  163 (331)
                      ...|+ ....+..++..|+.+.|.+.-+-+-+...++..+++..++|||.+++++.++.+++.|..++....+++++...
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t  132 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHT  132 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCC
Confidence            34444 35567788899999999999988899999999999999999999999999999999999877654333221100


Q ss_pred             C------CCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhh-cCCCChHHHHH--
Q 020068          164 L------AHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFG-WPHGSGFEAIQ--  234 (331)
Q Consensus       164 ~------~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~--  234 (331)
                      .      ..+..+..+........+ .+.....    +++++   .+++.|....+.+...-.... -....+.+.+.  
T Consensus       133 ~~~l~~~~~~~~fl~y~~~~~~~~~-~L~~~~~----~r~g~---~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~  204 (300)
T PF05653_consen  133 LDELIALLSQPGFLVYFILVLVLIL-ILIFFIK----PRYGR---RNILVYISICSLIGSFTVLSAKAISILIKLTFSGD  204 (300)
T ss_pred             HHHHHHHhcCcceehhHHHHHHHHH-HHHHhhc----chhcc---cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc
Confidence            0      001111122211111111 1111111    22211   112223333332222111100 00000000000  


Q ss_pred             HhhhCchHHHHHHHHHHHHHHHH-HHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHhcCC--CCCchh----hhhHhHH
Q 020068          235 FCKQHPEAAWDIFFYCLCGAVGQ-NFIFLTISRFGSLTNTTITT-TRKFVSIVVSSVLSGN--PLSSKQ----WGCVLMV  306 (331)
Q Consensus       235 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~i~~~sa~t~si~~~-l~~v~tills~~~f~e--~~t~~~----~~G~~lv  306 (331)
                      ....+|..|..+ ...+...+.| .+.+.+++++++....++.+ .-...+++-|.++|+|  +.++.+    ..|..++
T Consensus       205 ~~f~~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i  283 (300)
T PF05653_consen  205 NQFTYPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII  283 (300)
T ss_pred             hhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence            011234334222 2333445666 45677999999877555544 3456777888999997  455544    4466777


Q ss_pred             HHHHHHHHHHH
Q 020068          307 FSGLSYQIYLK  317 (331)
Q Consensus       307 ~~Gv~~~~~~k  317 (331)
                      +.|+.+-+..|
T Consensus       284 i~GV~lL~~~~  294 (300)
T PF05653_consen  284 IIGVFLLSSSK  294 (300)
T ss_pred             HHhhheeeccC
Confidence            77777654433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.35  E-value=1.4e-05  Score=62.18  Aligned_cols=105  Identities=15%  Similarity=0.258  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHH-HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 020068          210 NLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGA-VGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSS  288 (331)
Q Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~  288 (331)
                      ..++.+..++...  ..++..+.......++..  .....+.++. .++.+++++.++.++ ..++...+.|+++.++|.
T Consensus         5 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    5 YLFSVLFLLIILL--IRGRLRDLFRALRRKPWL--WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHH--HHccHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            3445555544443  344443333323333322  3344455554 777888999999995 777888999999999999


Q ss_pred             HhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          289 VLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       289 ~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      ++++|+++..++.|+++++.|+.+-.+.+-+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999988776543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.29  E-value=1.8e-05  Score=62.91  Aligned_cols=118  Identities=10%  Similarity=0.003  Sum_probs=81.4

Q ss_pred             hhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHH
Q 020068          171 LGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYC  250 (331)
Q Consensus       171 ~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  250 (331)
                      .|+++++.+.++.+...+.-|+=.++.++.+.   ..     ...   ...             +...+|..   .++.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~---~~-----~~~---~~~-------------~~~~~p~~---~i~lg   54 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSH---AW-----DFI---AAL-------------LAFGLALR---AVLLG   54 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccc---hh-----HHH---HHH-------------HHHhccHH---HHHHH
Confidence            47888999999888777776655554421111   00     000   000             00112211   23344


Q ss_pred             H-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH--hcCCCCCchhhhhHhHHHHHHHHHHH
Q 020068          251 L-CGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSV--LSGNPLSSKQWGCVLMVFSGLSYQIY  315 (331)
Q Consensus       251 ~-~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~--~f~e~~t~~~~~G~~lv~~Gv~~~~~  315 (331)
                      + +..+++.+|.+++++.+...+........+...+.++.  +|||++|+.+++|+++++.|+.+.+.
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            4 44577889999999999999999998888888777875  89999999999999999999998654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.21  E-value=3.6e-05  Score=70.25  Aligned_cols=133  Identities=11%  Similarity=0.018  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCC----CchHHHHHHH
Q 020068           13 LLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGG----APWWTYWSAG   88 (331)
Q Consensus        13 ~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~   88 (331)
                      ...+...+--.++..+++.+++..+        .  ++...+..|+..+.+...+...........    ..+......+
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~  219 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSRLPL--------P--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLA  219 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC--------C--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHH
Confidence            3444444455666777777766532        1  134567788888777665544333221111    1222334445


Q ss_pred             HH-HHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcccc
Q 020068           89 IT-NTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMK  155 (331)
Q Consensus        89 ~~-~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~  155 (331)
                      +. ...+..+.+.++++++.+...++.+..|++.+++++++++|++++.++++.++++.|+.+....+
T Consensus       220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            43 44667889999999999999999999999999999999999999999999999999999886543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.19  E-value=5.2e-05  Score=67.24  Aligned_cols=142  Identities=16%  Similarity=0.136  Sum_probs=106.8

Q ss_pred             CchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHH
Q 020068          169 APLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFF  248 (331)
Q Consensus       169 ~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  248 (331)
                      ...|+++.+.|-+.+|....+.+-+ +   +.++.|+..+--.++.+.......  ...+..+-.+ ..++|..+.....
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~---~~~~~eIlahRviwS~~~~l~ll~--~~r~~~~~~~-~~~~p~~~~~~~l   77 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-E---PLPATEILAHRVIWSFPFMLALLF--LLRQWRELKQ-LLKQPKTLLMLAL   77 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-c---cCCHHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHH-HHhCcHHHHHHHH
Confidence            4579999999999999988887644 3   468899999999999888876655  3344333222 3445654433322


Q ss_pred             HHHHHHHHH-HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          249 YCLCGAVGQ-NFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       249 ~~~~~~~~~-~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      .+.. ...| ..+-++..+-....+|.=-.+.|.+.+++|.++++|+++..||+..++..+||....+...
T Consensus        78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            2222 1234 3455788888899999999999999999999999999999999999999999998887643

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.11  E-value=8.4e-05  Score=60.74  Aligned_cols=133  Identities=16%  Similarity=0.097  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC--------CC-------CchH
Q 020068           18 VAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSA--------GG-------APWW   82 (331)
Q Consensus        18 ~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~--------~~-------~~~~   82 (331)
                      ...--.+.....+++|+..+... .++.+.+ |..+.......+++.+.+.....+...        .+       ..+.
T Consensus         5 ~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T PF03151_consen    5 ALASSLFSALRNVLIKKLLKKVS-SNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIF   82 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc-ccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHH
Confidence            33444556666667777776421 1123433 556666666666666655433322111        00       1122


Q ss_pred             HHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068           83 TYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      ..+..++.....+...+..+++.+.-++.+....|.+.+.+++.++++|+++..++.++++.++|+.+..
T Consensus        83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            2334455666778888999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.07  E-value=1.7e-05  Score=61.47  Aligned_cols=63  Identities=10%  Similarity=0.091  Sum_probs=58.1

Q ss_pred             HHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068           90 TNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus        90 ~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      ++..+..+...+++.+|.+.+-.+-++.++.+++.+++++|||+++++++++.++++|+++..
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            466778888999999999999888889999999999999999999999999999999999875

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.02  E-value=0.00012  Score=68.49  Aligned_cols=138  Identities=10%  Similarity=0.032  Sum_probs=97.3

Q ss_pred             CchhHHHHHHHHHHhhhchHHHHHHHhhCCCCC-hhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHH
Q 020068          169 APLGYGLCFLNLAFDGFTNATQDSITARYPKTS-AWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIF  247 (331)
Q Consensus       169 ~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (331)
                      ++.-..+.+.--.++.......|.+++..   + |..+..+...++.+...+...   .+. .+..+. ......+..++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~---~~P~~l~~~~~~~~~l~~~~~~~---~~~-~~~~~~-~~~~~~~~~ll  118 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNML---PLPWTISSLQLFVGWLFALLYWA---TGF-RKIPRI-KSLKLFLKNFL  118 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHH---hCC-CCCCCC-CCHHHHHHHHH
Confidence            34334444444445556677888887654   4 888888888887665544322   110 000000 00112345667


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          248 FYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      ..++++..++...+.+++.+++..++++....|+++++++.++++|+++..++.|+++++.|+.+..
T Consensus       119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            7888877777667789999999999999999999999999999999999999999999999988654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.98  E-value=0.00017  Score=66.10  Aligned_cols=123  Identities=16%  Similarity=0.225  Sum_probs=88.2

Q ss_pred             HhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 020068          182 FDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIF  261 (331)
Q Consensus       182 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  261 (331)
                      ++.....++|..+++.  ..|..+.+....++.+...+..   ..+.. +   ....+.+.+..++..+++.+..+.+.+
T Consensus        13 ~~~~~~~~NK~~l~~~--~~P~~~~~~~~~~~~~~~~~~~---~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~   83 (302)
T TIGR00817        13 LNVYFNIYNKKLLNVF--PYPYFKTLISLAVGSLYCLLSW---SSGLP-K---RLKISSALLKLLLPVAIVHTIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHhhC--ChhHHHHHHHHHHHHHHHHHHH---HhCCC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333456777777643  4577777666666655543331   11110 0   001122345566777777777778899


Q ss_pred             HHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          262 LTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       262 ~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      .+++++++...+++....|+++.+++.++++|+++..++.|.++.+.|+.+.
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999998754

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.97  E-value=0.00028  Score=64.58  Aligned_cols=123  Identities=17%  Similarity=0.170  Sum_probs=89.5

Q ss_pred             HHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHH
Q 020068          174 GLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCG  253 (331)
Q Consensus       174 ~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  253 (331)
                      ++.+++.++|+......|....   +.+|.+..++-..++.+..+++..  . ..          .+  +......++..
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~---~~~p~~~~~~R~~~a~~~l~~~~~--~-~~----------~~--~~~~~~~g~~~   68 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH---NMPPLMLAGLRFMLVAFPAIFFVA--R-PK----------VP--LNLLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHHHhc--C-CC----------Cc--hHHHHHHHHHH
Confidence            4577889999999988876654   568999999998887665544321  1 10          01  11233334433


Q ss_pred             HHHH-HHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          254 AVGQ-NFIFLTISR-FGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       254 ~~~~-~~~~~~i~~-~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      ..++ .+.+...++ .++..+++.....|+++.++++++++|+++..+++|+++.+.|+.+-.
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            3333 355667776 477888989999999999999999999999999999999999987654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.94  E-value=0.00042  Score=63.23  Aligned_cols=133  Identities=11%  Similarity=-0.032  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCC--chHHHHHHHHH-
Q 020068           14 LAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGA--PWWTYWSAGIT-   90 (331)
Q Consensus        14 ~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~-   90 (331)
                      ..+..++--.++..+.++.++..+        +. .|... ..+.+++.+...+............  .+...+.+++. 
T Consensus       149 G~ll~l~aa~~~a~~~v~~r~~~~--------~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~  218 (293)
T PRK10532        149 GAALALGAGACWAIYILSGQRAGA--------EH-GPATV-AIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILS  218 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc--------cC-CchHH-HHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHH
Confidence            334444444666677777766643        11 13344 3455555555444333322111111  11112344544 


Q ss_pred             HHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccC
Q 020068           91 NTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKT  156 (331)
Q Consensus        91 ~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~  156 (331)
                      ..++..+.+.++++++.+...++-+..|++..++++++++|+++..++++..++++|++.......
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            456777889999999999999999999999999999999999999999999999999999876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.94  E-value=0.00026  Score=64.69  Aligned_cols=129  Identities=8%  Similarity=0.027  Sum_probs=89.1

Q ss_pred             hhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHH
Q 020068          171 LGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYC  250 (331)
Q Consensus       171 ~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  250 (331)
                      .++++++.+.++|+......|...+   +.+|.....+-..++.++.+++.   .....       ..++  +...+..+
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~---~~~P~~~~~~R~~~a~l~l~~~~---~~~~~-------~~~~--~~~~~~~~   68 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE---SLGPVGGAAMIYSVSGLLLLLTV---GFPRL-------RQFP--KRYLLAGG   68 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc---cCChHHHHHHHHHHHHHHHHHHc---ccccc-------cccc--HHHHHHHh
Confidence            3567788899999988888876554   46899998888888877776542   11110       1111  11222222


Q ss_pred             HHHHHHHHHHHHHH----HhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          251 LCGAVGQNFIFLTI----SRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       251 ~~~~~~~~~~~~~i----~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      +.......+.+..+    +..++..+++..++.|+++.++++++++|+++..+++|+++.+.|+.+-.
T Consensus        69 l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~  136 (295)
T PRK11689         69 LLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL  136 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence            22222233344444    45677888999999999999999999999999999999999999987654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.92  E-value=0.00012  Score=67.07  Aligned_cols=129  Identities=8%  Similarity=0.043  Sum_probs=95.5

Q ss_pred             chHHHHHHHhhCCCC-ChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Q 020068          186 TNATQDSITARYPKT-SAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLCGAVGQNFIFLTI  264 (331)
Q Consensus       186 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i  264 (331)
                      +...||++.++..+. .+.-+++-......+...+...  ....       .......+...+..+++...+..+.+.++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLS--LFKF-------PKSRKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHH--hccc-------cCCCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            457899998765233 3666666666666666665443  2220       01111123344566777777778888999


Q ss_pred             HhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHHhHH
Q 020068          265 SRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRKLQR  323 (331)
Q Consensus       265 ~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~~~~  323 (331)
                      ++.+..+..+.-..+++.+++++.++++++.+..++.+.+++..|+.+....+.+.++.
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            99999999999999999999999999999999999999999999999988776555443

; GO: 0055085 transmembrane transport

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.88  E-value=0.00013  Score=56.49  Aligned_cols=60  Identities=12%  Similarity=0.195  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      ..+.+++..++++.+...+.....+.++.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus        48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            356677888999999999999889999999999999999999999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.72  E-value=0.029  Score=52.02  Aligned_cols=226  Identities=13%  Similarity=0.061  Sum_probs=122.3

Q ss_pred             HHHHHHHhhhHHhHhhhcccchhHHH-HHhhcchHHHHHHHHHhhcccc---C----chhHHHHHHHhhhhhhhcc----
Q 020068           86 SAGITNTIGPAMGIEALKYISYPAQV-LAKSSKMIPVMLMGTLVYGIRY---T----LPEYICTLLVAGGVSSFAL----  153 (331)
Q Consensus        86 ~~~~~~~~~~~~~~~sl~~i~~~~~~-~~ks~~pi~v~l~~~l~~~e~~---~----~~~~~~~~~i~~Gv~l~~~----  153 (331)
                      .-|++...+......+.+|+-++... +.--...+...++..++++|-.   +    ..-..+++++++|+++.+.    
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            34556667888899999997666443 2223445566677777887654   2    3467788999999999998    


Q ss_pred             ccCCccccccCCCCCCchhHHHHHHHHHHhhhch-------HHHHHHHhhCCCCChhhHHHHHHH---HHHHH-HHHHhh
Q 020068          154 MKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTN-------ATQDSITARYPKTSAWDIMLGMNL---WGTIY-NLFYMF  222 (331)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------~~~~~l~~~~~~~~~~~~~~~~~~---~~~i~-~~~~~~  222 (331)
                      .|.++.. ++.++.+.-.|+++++++.+.++.++       ...+...+ . +.++.....-...   ++... .++++.
T Consensus       158 k~~~~~~-~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~-g~~~~~~~lp~~~~~~~G~~~~n~~~~~  234 (345)
T PRK13499        158 KERKMGI-KKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-L-GVDPLYAALPSYVVIMGGGAITNLGFCF  234 (345)
T ss_pred             ccccccc-ccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-c-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4332110 00122345689999999999998888       33332211 2 3444333222222   11111 111111


Q ss_pred             hc-CCCC-hHHHHHHhhhCchHHHHHHHHHHHH---HHHHHHHHHHHHhhchHHHHH---HH-HHHHHHHHHHHHHhcCC
Q 020068          223 GW-PHGS-GFEAIQFCKQHPEAAWDIFFYCLCG---AVGQNFIFLTISRFGSLTNTT---IT-TTRKFVSIVVSSVLSGN  293 (331)
Q Consensus       223 ~~-~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~i~~~sa~t~si---~~-~l~~v~tills~~~f~e  293 (331)
                      .. ..++ .....++....+..+...+...+.+   ++++.++...-++.|.....+   .. .+--+++.+.+. +++|
T Consensus       235 ~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE  313 (345)
T PRK13499        235 IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKE  313 (345)
T ss_pred             HHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhh
Confidence            00 0111 0000011000011122222222222   456666777777775544444   33 555588888888 4898


Q ss_pred             CCC------chhhhhHhHHHHHHHHHHH
Q 020068          294 PLS------SKQWGCVLMVFSGLSYQIY  315 (331)
Q Consensus       294 ~~t------~~~~~G~~lv~~Gv~~~~~  315 (331)
                      .=+      ..-++|+++++.|..+...
T Consensus       314 ~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        314 WKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             ccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            655      5568899999999876544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.64  E-value=0.0013  Score=51.36  Aligned_cols=73  Identities=11%  Similarity=0.066  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHhhhHHhHhhhcccchhHH-HHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcccc
Q 020068           83 TYWSAGITNTIGPAMGIEALKYISYPAQ-VLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMK  155 (331)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~sl~~i~~~~~-~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~  155 (331)
                      .....-+++..+..+...+++++|.+.+ .+......+.+.+.+.++++|+.++.+++++.++++|+...-..+
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3455556788889999999999999865 444567788899999999999999999999999999999886544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.59  E-value=0.00086  Score=61.12  Aligned_cols=131  Identities=12%  Similarity=0.028  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhc--cCCCCCchHHHHHHHH
Q 020068           12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWS--SSAGGAPWWTYWSAGI   89 (331)
Q Consensus        12 ~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~   89 (331)
                      .+.++..+..=++|..+....+...   +        .|...++.|.....+.+..+....+  ++......+..+..|+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~---~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi  219 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFG---V--------DGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGL  219 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC---C--------CcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence            4555555555567777777776541   2        1445555565532222222211111  1111112233344677


Q ss_pred             HHHhhhHHhHhhhc-ccchhHHHHHhhcchHHHHHHHHHhhccccCchhH----HHHHHHhhhhhhhcc
Q 020068           90 TNTIGPAMGIEALK-YISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEY----ICTLLVAGGVSSFAL  153 (331)
Q Consensus        90 ~~~~~~~~~~~sl~-~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~----~~~~~i~~Gv~l~~~  153 (331)
                      ....+..+...+++ +++++.+.++-+..|+...+.+.+++||+.+++|+    ++.++++.|+.+...
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            76677788889999 99999999999999999999999999999999999    999999999998754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.58  E-value=0.00079  Score=62.21  Aligned_cols=77  Identities=13%  Similarity=0.131  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          243 AWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       243 ~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      |+.-++++++-.-++++...+.++++.+...+......++++++|++++++++++.|++|++++++|+.+..+....
T Consensus        79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            33344567888899999999999999999999999999999999999999999999999999999999887666543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.58  E-value=0.00043  Score=55.05  Aligned_cols=72  Identities=17%  Similarity=0.145  Sum_probs=60.1

Q ss_pred             HHHHHH-HHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHH--hhccccCchhHHHHHHHhhhhhhhcccc
Q 020068           84 YWSAGI-TNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTL--VYGIRYTLPEYICTLLVAGGVSSFALMK  155 (331)
Q Consensus        84 ~~~~~~-~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l--~~~e~~~~~~~~~~~~i~~Gv~l~~~~~  155 (331)
                      ++..++ ++..+..+.+.+++.+|.+.+.-+-+..++.+++.++.  +++|+.+++++++++++++|+.+...++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            444554 57788999999999999998887778777777777764  8999999999999999999999987543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.55  E-value=0.0019  Score=59.80  Aligned_cols=140  Identities=15%  Similarity=0.122  Sum_probs=90.0

Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHH--HHHhh-hcCCCChHHHHHHhhhCchHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYN--LFYMF-GWPHGSGFEAIQFCKQHPEAAW  244 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~  244 (331)
                      +...|+++++++.+|++..++-+|| .|+    -++|.. |. ..+....  .|+.. .+..+++.+.  ..+.++..+.
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~----w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~--~~~~~~~~~~   74 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK----WSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAY--YSSFSGSTLL   74 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC----CchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHH--HHhcCHHHHH
Confidence            4568999999999999999988876 332    355654 33 2222111  12111 0112222221  1123444554


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHhcCCCC---C----chhhhhHhHHHHHHHHHHHH
Q 020068          245 DIFFYCLCGAVGQNFIFLTISRFGSLTNTTITT-TRKFVSIVVSSVLSGNPL---S----SKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       245 ~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~-l~~v~tills~~~f~e~~---t----~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      ..++.+++=.+||+..+..+++.|.+....+++ +.-+.+.+++.+++||--   +    ....+|+++++.|+.+..+-
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            455556666789999999999999766555544 778889999999999632   3    34677999999999998873

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.43  E-value=0.004  Score=55.92  Aligned_cols=142  Identities=13%  Similarity=-0.007  Sum_probs=93.3

Q ss_pred             CchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHH
Q 020068          169 APLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFF  248 (331)
Q Consensus       169 ~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  248 (331)
                      ...+....+.+.+.++......+.....  ..+.....++...++.+...+...  . .. .   .........++..+.
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~---~~~~~~~~~~~~~~~   75 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL--L-EP-R---GLRPALRPWLLLLLL   75 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH--h-hc-c---cccccccchHHHHHH
Confidence            3456667777777887777666655432  234555555566655555322221  1 00 0   000111111223333


Q ss_pred             HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH-HhcCCCCCchhhhhHhHHHHHHHHHHHHHHH
Q 020068          249 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSS-VLSGNPLSSKQWGCVLMVFSGLSYQIYLKWR  319 (331)
Q Consensus       249 ~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~-~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~  319 (331)
                      -.+.....+.+++..++++++...++.....|+++.+++. ++++|+++..++.|..+.+.|+.+.......
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            3344456778889999999999999999999999999997 7779999999999999999999887665443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.39  E-value=0.0042  Score=47.68  Aligned_cols=68  Identities=15%  Similarity=0.108  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhhhHHhHhhhcccchhHH-HHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhh
Q 020068           84 YWSAGITNTIGPAMGIEALKYISYPAQ-VLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSF  151 (331)
Q Consensus        84 ~~~~~~~~~~~~~~~~~sl~~i~~~~~-~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~  151 (331)
                      .......+..+..+...++|.+|.+.+ .+--....+.+.+.+.+++||+.++.+++++.+++.|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444455677788888899999999855 55555667788889999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.38  E-value=0.0034  Score=47.92  Aligned_cols=71  Identities=10%  Similarity=0.083  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhhhHHhHhhhcccchhHH-HHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068           82 WTYWSAGITNTIGPAMGIEALKYISYPAQ-VLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~sl~~i~~~~~-~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      ...+..-.++..+..+...++|.+|.+.+ .+--..-.+.+.+.+.+++||+.++.+++++.++++|++..-
T Consensus        30 ~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         30 TPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33444555677888888999999998855 555556777888999999999999999999999999999864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.33  E-value=5.5e-05  Score=65.31  Aligned_cols=210  Identities=15%  Similarity=0.127  Sum_probs=129.1

Q ss_pred             HHHHHhhhHHhHhhhcccchhHHHHHh-hcchHHHHHHHHHhhccccCchhH----HHHHHHhhhhhhhccccCCccccc
Q 020068           88 GITNTIGPAMGIEALKYISYPAQVLAK-SSKMIPVMLMGTLVYGIRYTLPEY----ICTLLVAGGVSSFALMKTSSKTIS  162 (331)
Q Consensus        88 ~~~~~~~~~~~~~sl~~i~~~~~~~~k-s~~pi~v~l~~~l~~~e~~~~~~~----~~~~~i~~Gv~l~~~~~~~~~~~~  162 (331)
                      |.....+....+.|.+++.+|-+.-+. .+..+-+-+++.+.++|..+..+.    .+++++++|+.+.++.|.++..  
T Consensus        66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~--  143 (288)
T COG4975          66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE--  143 (288)
T ss_pred             hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc--
Confidence            334456677788899986555432111 123445567888999999988764    5788899999998887654321  


Q ss_pred             cCCCCCCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchH
Q 020068          163 KLAHPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEA  242 (331)
Q Consensus       163 ~~~~~~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (331)
                      +.+.++.-.|+..++.|.+.+-.|.+..+.    . +.+.++..+-+..-..+..+.+..  ...|..    +   +...
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f-~v~g~saiLPqAiGMv~~ali~~~--~~~~~~----~---~K~t  209 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQL----F-DVDGLSAILPQAIGMVIGALILGF--FKMEKR----F---NKYT  209 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeecc----c-cccchhhhhHHHHHHHHHHHHHhh--cccccc----h---HHHH
Confidence            112334457888888888887777665532    2 344555544444333333333322  111110    1   1111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhh----hhHhHHHHHHHHHH
Q 020068          243 AWDIFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQW----GCVLMVFSGLSYQI  314 (331)
Q Consensus       243 ~~~i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~----~G~~lv~~Gv~~~~  314 (331)
                      | .-..-++.=..|+++++.+.++.|-.|.=-.+-+--+++.+-+.++++|+=|..++    +|+++++.|..+-.
T Consensus       210 ~-~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         210 W-LNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             H-HHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            2 12233344457888888888888877655556666788899999999999887664    57788888766543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.0035  Score=47.52  Aligned_cols=72  Identities=19%  Similarity=0.259  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHhhhHHhHhhhcccchhHH-HHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcc
Q 020068           82 WTYWSAGITNTIGPAMGIEALKYISYPAQ-VLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFAL  153 (331)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~sl~~i~~~~~-~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~  153 (331)
                      +..+..-+++..+..+.-.|+|.+|.+++ .+---.-.+.+.+.++++++|+.+..+++++.++++|+...-.
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            34555556777888888999999999855 5555566778889999999999999999999999999997643

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.32  E-value=0.0051  Score=47.39  Aligned_cols=70  Identities=20%  Similarity=0.243  Sum_probs=57.7

Q ss_pred             HHHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccc
Q 020068           85 WSAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALM  154 (331)
Q Consensus        85 ~~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~  154 (331)
                      ...-+++..+..+...+++.+|.+.+--. -....+.+.+.+.++++|+.++.+++++.++++|++..-..
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34455677888888899999999876544 34567788899999999999999999999999999998643

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.28  E-value=0.00067  Score=60.14  Aligned_cols=75  Identities=17%  Similarity=0.285  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHH
Q 020068          246 IFFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRK  320 (331)
Q Consensus       246 i~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~  320 (331)
                      ...-+++-.+.+.+.|.++++.+|.+..+....|.++|.++++++++++++..||+++.+.+.|+.+........
T Consensus        20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            334444555677889999999999999999999999999999999999999999999999999999877665544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.19  E-value=0.013  Score=45.02  Aligned_cols=60  Identities=10%  Similarity=0.138  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLT-NTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t-~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      .+++++...++|+.+..+ .++-.-+.-+.+.+.|+++|||++|+.+++|+.+++.|+..-
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            355566677788887555 677777888999999999999999999999999999998763

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.14  E-value=0.002  Score=50.33  Aligned_cols=64  Identities=9%  Similarity=0.053  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLT-NTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLK  317 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t-~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k  317 (331)
                      .++.++...++++.+... .++..-+.-+.+.++|+++|||++|+.+++|+.+++.|+..-....
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            356667777888877555 4555567788899999999999999999999999999998764433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.02  E-value=0.0046  Score=47.64  Aligned_cols=62  Identities=10%  Similarity=0.009  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHH
Q 020068          255 VGQNFIFLTISRFGSLT-NTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       255 ~~~~~~~~~i~~~sa~t-~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      .+.++...++++.+... .++-.-+.-+.+.+.|+++|||++|+.+++|+.+++.|+..-...
T Consensus        42 ~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44555667778877555 455566778899999999999999999999999999999886443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.97  E-value=0.018  Score=51.48  Aligned_cols=119  Identities=13%  Similarity=0.036  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHH
Q 020068           11 VLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSAGGAPWWTYWSAGIT   90 (331)
Q Consensus        11 ~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (331)
                      ..|.+...+.--++|..|....+...-           .|+...+-|.+...+.+.++....+++..++..++-+..|+.
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~~~~-----------~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~  204 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKAFHV-----------SGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLI  204 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcCC-----------ChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHH
Confidence            344455455455777888887755321           145666677666655555554433322223333445677888


Q ss_pred             HHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHH
Q 020068           91 NTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYIC  140 (331)
Q Consensus        91 ~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~  140 (331)
                      ...++.+...|-+.+-++++-.+..+.++...+.+.+++||+-+++++..
T Consensus       205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~  254 (269)
T PF06800_consen  205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY  254 (269)
T ss_pred             HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH
Confidence            88999999999998888877777788888889999999999999887753

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.95  E-value=0.0028  Score=57.14  Aligned_cols=215  Identities=15%  Similarity=0.128  Sum_probs=126.8

Q ss_pred             HHH-HHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccCCccccccC-
Q 020068           87 AGI-TNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKTSSKTISKL-  164 (331)
Q Consensus        87 ~~~-~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~~~~~~~~~-  164 (331)
                      .|+ ....+-..++.|..|.|.+.-+-+-+.+.+...+++..+++|+.++...++++++++|-.++....+++.+.+.. 
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~  148 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVE  148 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHH
Confidence            444 455778889999999999988888899999999999999999999999999999999999888765544321000 


Q ss_pred             -----CCCCCchhHHHH-HHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHH-hh
Q 020068          165 -----AHPNAPLGYGLC-FLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQF-CK  237 (331)
Q Consensus       165 -----~~~~~~~G~~l~-l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~  237 (331)
                           ..+..++.+... .+..+.--   .+   ..+++   ...+++.|....+.+..+-.+-   .-.+..++.. .+
T Consensus       149 el~~~~~~~~Fliy~~~iil~~~il~---~~---~~p~~---g~tnilvyi~i~s~iGS~tV~s---vKalg~aiklt~~  216 (335)
T KOG2922|consen  149 EVWELATEPGFLVYVIIIILIVLILI---FF---YAPRY---GQTNILVYIGICSLIGSLTVMS---VKALGIAIKLTFS  216 (335)
T ss_pred             HHHHHhcCccHHHHHHHHHHHHHHHh---ee---ecccc---cccceeehhhHhhhhcceeeee---HHHHHHHHHHHhc
Confidence                 001111111111 11111100   01   11123   2345566777777665432211   0011111111 11


Q ss_pred             -----hCchHHHHHHHHHHHHHHHH-HHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHhcCC--CCCchhh----hhHh
Q 020068          238 -----QHPEAAWDIFFYCLCGAVGQ-NFIFLTISRFGSLTNTTITT-TRKFVSIVVSSVLSGN--PLSSKQW----GCVL  304 (331)
Q Consensus       238 -----~~~~~~~~i~~~~~~~~~~~-~~~~~~i~~~sa~t~si~~~-l~~v~tills~~~f~e--~~t~~~~----~G~~  304 (331)
                           .+|..|...+... +...-| .....+++.+++...+++.+ .-..++++.|.++|+|  ..+..+.    .|..
T Consensus       217 g~~ql~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~  295 (335)
T KOG2922|consen  217 GNNQLFYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV  295 (335)
T ss_pred             CCcccccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence                 1333332222222 223444 34567889999888777766 4466788889999998  4555544    4667


Q ss_pred             HHHHHHHHHH
Q 020068          305 MVFSGLSYQI  314 (331)
Q Consensus       305 lv~~Gv~~~~  314 (331)
                      .++.|+.+-.
T Consensus       296 ti~~G~flL~  305 (335)
T KOG2922|consen  296 TIFLGIFLLH  305 (335)
T ss_pred             HhhheeeEee
Confidence            7777776653

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.91  E-value=0.039  Score=44.40  Aligned_cols=130  Identities=15%  Similarity=0.138  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH
Q 020068          173 YGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC  252 (331)
Q Consensus       173 ~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (331)
                      .++.+.+-++-++....+-++.++. + ||++..+.++..+.+......+  ..++.  ........|  | ....-+++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~-g-s~~~as~i~~~~G~i~~~i~~~--~~~~~--~~~~~~~~p--~-w~~lGG~l   73 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKAL-G-SPLVASFISFGVGFILLLIILL--ITGRP--SLASLSSVP--W-WAYLGGLL   73 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-C-ccHHHHHHHHHHHHHHHHHHHH--Hhccc--ccchhccCC--h-HHhccHHH
Confidence            3455556666666666666666554 2 6899999999999988887765  33332  111111122  2 22335567


Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHH-hc---CCCCCchhhhhHhHHHHHHH
Q 020068          253 GAVGQNFIFLTISRFGSLTNTTITTTRKFV-SIVVSSV-LS---GNPLSSKQWGCVLMVFSGLS  311 (331)
Q Consensus       253 ~~~~~~~~~~~i~~~sa~t~si~~~l~~v~-tills~~-~f---~e~~t~~~~~G~~lv~~Gv~  311 (331)
                      +.+...+....+++.|+..+......-.+. +++++.+ +|   ++++|+.+.+|+++++.|+.
T Consensus        74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            776667778889999999877777665554 4444544 33   35899999999999999986

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.86  E-value=0.009  Score=45.60  Aligned_cols=60  Identities=13%  Similarity=0.113  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLT-NTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ  313 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t-~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~  313 (331)
                      ..++++...++|+.+..+ .++-.-+..+.+.+.|+++|||++|+.+++|+.+++.|+..-
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            355566667778777544 677777888999999999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.71  E-value=0.013  Score=44.51  Aligned_cols=61  Identities=13%  Similarity=0.072  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHH
Q 020068          255 VGQNFIFLTISRFGSLT-NTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIY  315 (331)
Q Consensus       255 ~~~~~~~~~i~~~sa~t-~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~  315 (331)
                      .++.+.-.++|+.+-.+ .++-+-.-.+.+.+.|+++|||++|+.+++|+.+++.|+..-..
T Consensus        42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            44445556777777544 67777788899999999999999999999999999999886543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.61  E-value=0.019  Score=42.86  Aligned_cols=57  Identities=16%  Similarity=0.216  Sum_probs=34.2

Q ss_pred             HHHHHhhhHHhHhhhcccchhHH-HHHhhcchHHHHHHHHHhhccccCchhHHHHHHH
Q 020068           88 GITNTIGPAMGIEALKYISYPAQ-VLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLV  144 (331)
Q Consensus        88 ~~~~~~~~~~~~~sl~~i~~~~~-~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i  144 (331)
                      -.++..+..+...+++++|.+.+ .+......+.+.+.+.+++||+.+++|+.++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33677888899999999999865 5566678888999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.51  E-value=0.022  Score=52.10  Aligned_cols=118  Identities=13%  Similarity=0.168  Sum_probs=82.9

Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIF  247 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (331)
                      +...|+.+.+.++++.+...++||+-..|.++ ++..                     .++  +.... ..+|.+|..+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~---------------------~~~--~~~~~-l~~~~W~~G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLR---------------------AGS--GGRSY-LRRPLWWIGLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccc---------------------ccc--hhhHH-HhhHHHHHHHH
Confidence            46789999999999999999999987655422 1100                     000  00001 11232222221


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          248 FYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      .    -.+|+...+.++...++...++.+.+.-+++.+++..+++|+++...++|.++++.|...-.
T Consensus        59 ~----~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 L----MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             H----HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            1    12455566678888888889999999999999999999999999999999999999977643

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.00  E-value=0.027  Score=42.02  Aligned_cols=53  Identities=15%  Similarity=0.208  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHH
Q 020068          254 AVGQNFIFLTISRFGSLTN-TTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMV  306 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t~-si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv  306 (331)
                      ..+.+++..++++.+..++ ++..-+..+.+.+.|.++|||++|+.+++|+.++
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3555677788999887665 5556688899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=95.88  E-value=0.099  Score=45.50  Aligned_cols=65  Identities=14%  Similarity=0.147  Sum_probs=56.8

Q ss_pred             HHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhh
Q 020068           86 SAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSS  150 (331)
Q Consensus        86 ~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l  150 (331)
                      ...+.......+-...++|.+..+..+.-+++++++.+++.++++++++..++.+..+++.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34455666667788899999988999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.58  E-value=0.28  Score=45.14  Aligned_cols=64  Identities=16%  Similarity=0.333  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHH
Q 020068          255 VGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKW  318 (331)
Q Consensus       255 ~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~  318 (331)
                      +-+-+.|.+.++.+|.|..+...+|...|-+++++++++.++..||...++.+.|+.+.++...
T Consensus       104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen  104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            4445789999999999999999999999999999999999999999999999999999884443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.50  E-value=0.023  Score=43.75  Aligned_cols=69  Identities=17%  Similarity=0.115  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhh
Q 020068           83 TYWSAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSF  151 (331)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~  151 (331)
                      +|..-=+.+-.++..++..+...|.|.+.-+ .++.-+++.+.++++.+|..+++.+.+++++++|+.+.
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            4554445677888888999998888766544 57888999999999988888999999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.48  E-value=0.0056  Score=53.80  Aligned_cols=70  Identities=11%  Similarity=0.177  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHH
Q 020068          247 FFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       247 ~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      ++=|+.|+.|-+..|++..+.+-..+++++...|++++++++++++|++|.....|..+.+.|+.+..+.
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            4557778888888999999999999999999999999999999999999999999999999998875543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.21  E-value=0.44  Score=38.64  Aligned_cols=138  Identities=18%  Similarity=0.192  Sum_probs=78.8

Q ss_pred             hhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHH
Q 020068          171 LGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYC  250 (331)
Q Consensus       171 ~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  250 (331)
                      ..++..+.|-++-.+....+.|+.+..  .+|.--.+..+..+++......+  . .+-.+........|  || .+.-+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l--~-~~~~~~~a~~~~~p--wW-~~~GG   76 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLL--I-KQGHPGLAAVASAP--WW-AWIGG   76 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHH--H-hcCCCchhhccCCc--hH-HHHcc
Confidence            445556666666666666666665543  36877778888888877776665  2 22111111112222  22 22223


Q ss_pred             HHHHHHHHHHHHHHHhhchHHHHHHHHH-HHHHHHHHHHHhcC----CCCCchhhhhHhHHHHHHHHHHHH
Q 020068          251 LCGAVGQNFIFLTISRFGSLTNTTITTT-RKFVSIVVSSVLSG----NPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       251 ~~~~~~~~~~~~~i~~~sa~t~si~~~l-~~v~tills~~~f~----e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      .++.+--........+.|+.++...... .-+.+++++.+=+.    .++|...+.|++++++|+.+....
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3333322334456677777765555444 34445555544333    579999999999999996654433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.08  E-value=0.077  Score=48.66  Aligned_cols=141  Identities=18%  Similarity=0.145  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHH-HHHHHhccCCC----CCch----
Q 020068           11 VLLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSY-IMLKLWSSSAG----GAPW----   81 (331)
Q Consensus        11 ~~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~-~~~~~~~~~~~----~~~~----   81 (331)
                      ++....+..+...+.....++.+.+.+..    +++.+ ++.+...+.-++++.+. +......+...    ..++    
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~  235 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSK----GESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF  235 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh
Confidence            46677777888888899999999988532    12333 45666666666666665 44333221111    1121    


Q ss_pred             HHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccC
Q 020068           82 WTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKT  156 (331)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~  156 (331)
                      ......++++...+...+..+..++.-+++++-..|=+.+...++++++++.++.+.++.++.++|+++......
T Consensus       236 ~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  236 LILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            223344566667778888899999998999998888888999999999999999999999999999999876443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.87  E-value=1  Score=39.68  Aligned_cols=59  Identities=17%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             hHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcc
Q 020068           95 PAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFAL  153 (331)
Q Consensus        95 ~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~  153 (331)
                      ..+...+|+.+|-+++.++-|..|..-.+.++++++|+++..||+++..++.+..=.+.
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            45677899999999999999999999999999999999999999999999887774443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.64  E-value=0.011  Score=51.45  Aligned_cols=135  Identities=12%  Similarity=0.071  Sum_probs=88.4

Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHH
Q 020068          172 GYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCL  251 (331)
Q Consensus       172 G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  251 (331)
                      +++.+++-++.|+.......|    . +-.|.|...-+.+-+.+..+...+ ...++         .++..+..-+..+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k----~-GG~p~qQ~lGtT~GALifaiiv~~-~~~p~---------~T~~~~iv~~isG~   67 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANK----F-GGKPYQQTLGTTLGALIFAIIVFL-FVSPE---------LTLTIFIVGFISGA   67 (288)
T ss_pred             hHHHHHHHHHHhcccceeeee----c-CCChhHhhhhccHHHHHHHHHHhe-eecCc---------cchhhHHHHHHhhh
Confidence            466777788888877765543    2 446777666666555555544332 11111         11222222222333


Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHhcCCCCCchhh----hhHhHHHHHHHHHHHHHHHHh
Q 020068          252 CGAVGQNFIFLTISRFGSLTNTTITT-TRKFVSIVVSSVLSGNPLSSKQW----GCVLMVFSGLSYQIYLKWRKL  321 (331)
Q Consensus       252 ~~~~~~~~~~~~i~~~sa~t~si~~~-l~~v~tills~~~f~e~~t~~~~----~G~~lv~~Gv~~~~~~k~~~~  321 (331)
                      .=.+||...|.+++..|.+.+.++++ ..-+-+.+++++.|||--++.+.    +..++++.|+++.++.++.+|
T Consensus        68 ~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk  142 (288)
T COG4975          68 FWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK  142 (288)
T ss_pred             HhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence            33589999999999999999998887 55677889999999997776654    456788899998888776433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.41  E-value=0.55  Score=37.73  Aligned_cols=101  Identities=16%  Similarity=0.264  Sum_probs=69.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccC----CCCCchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHH
Q 020068           49 HLAFLNLAQNVVCLIWSYIMLKLWSSS----AGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVML  123 (331)
Q Consensus        49 ~p~~lt~~q~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l  123 (331)
                      .|+.-+++-+..+.+.+.++....+++    .++.||+.|+ -|++.+....+...+...+.++..+.+ -....+.-++
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~  107 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL  107 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            477888888888888887766555432    2345666555 566667777777888888776655433 3334444555


Q ss_pred             HHHH----hhccccCchhHHHHHHHhhhhhh
Q 020068          124 MGTL----VYGIRYTLPEYICTLLVAGGVSS  150 (331)
Q Consensus       124 ~~~l----~~~e~~~~~~~~~~~~i~~Gv~l  150 (331)
                      ++.+    .-+++.++++++++.++.+|+.+
T Consensus       108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5543    34688999999999999999864

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.27  E-value=0.087  Score=46.78  Aligned_cols=134  Identities=13%  Similarity=0.049  Sum_probs=68.8

Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHH
Q 020068          172 GYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCL  251 (331)
Q Consensus       172 G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  251 (331)
                      |++.++.|.++.+...+=.|    +++..++.-..++++.-..+......+  ..           ..|...+...+-|.
T Consensus         1 G~~a~~va~~~fGs~~vPvK----~~~~gDg~~fQw~~~~~i~~~g~~v~~--~~-----------~~p~f~p~amlgG~   63 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVK----KFDTGDGFFFQWVMCSGIFLVGLVVNL--IL-----------GFPPFYPWAMLGGA   63 (254)
T ss_pred             CchhHHHHHHHhcccceeeE----eccCCCcHHHHHHHHHHHHHHHHHHHH--hc-----------CCCcceeHHHhhhh
Confidence            56677778777776554443    343345544444444444333333322  11           11222211112222


Q ss_pred             HHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHH-hcCCC-----CCchhhhhHhHHHHHHHHHHHHHHHHhH
Q 020068          252 CGAVGQNFIFLTISRFG-SLTNTTITTTRKFVSIVVSSV-LSGNP-----LSSKQWGCVLMVFSGLSYQIYLKWRKLQ  322 (331)
Q Consensus       252 ~~~~~~~~~~~~i~~~s-a~t~si~~~l~~v~tills~~-~f~e~-----~t~~~~~G~~lv~~Gv~~~~~~k~~~~~  322 (331)
                      .=+.|+.+..-.++..| ++-..+-++..-+..-..|-+ +||.+     -++++++|++++++|..++.+.|.+.++
T Consensus        64 lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~  141 (254)
T PF07857_consen   64 LWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKE  141 (254)
T ss_pred             hhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCC
Confidence            22334444444455555 222333344444444444433 56542     3578999999999999999888776644

The region concerned is approximately 280 residues long.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.23  E-value=2.6  Score=38.90  Aligned_cols=142  Identities=11%  Similarity=0.092  Sum_probs=73.4

Q ss_pred             CCchhHHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhh-cCCCChHHHHHHhhhCc-hHHHH
Q 020068          168 NAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFG-WPHGSGFEAIQFCKQHP-EAAWD  245 (331)
Q Consensus       168 ~~~~G~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~  245 (331)
                      ....|+++..++.++.+..++=.||. |    .=++|......-+-..+..|.... ...+++.+-   ....| +.+..
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i---~~~~~~~~l~~   75 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-K----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSI---YSATPASTLFW   75 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-C----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH---HHhCChhHHHH
Confidence            45689999999999988887766554 2    234665554444333344444331 123344332   22222 23333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHhcC-------CCCCchhhhhHhHHHHHHHHHHHHH
Q 020068          246 IFFYCLCGAVGQNFIFLTISRFG-SLTNTTITTTRKFVSIVVSSVLSG-------NPLSSKQWGCVLMVFSGLSYQIYLK  317 (331)
Q Consensus       246 i~~~~~~~~~~~~~~~~~i~~~s-a~t~si~~~l~~v~tills~~~f~-------e~~t~~~~~G~~lv~~Gv~~~~~~k  317 (331)
                      ..++++.=-+|.+.+-..+++.| ++..+++.=+--++..++--++.|       ++-...-++|+++++.|+.+..+-.
T Consensus        76 ~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   76 TFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            33444432334444445555555 222333333333333333333322       2333467889999999999876643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.45  E-value=0.11  Score=40.18  Aligned_cols=60  Identities=13%  Similarity=0.284  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHH
Q 020068          253 GAVGQNFIFLTISRFGSLTNTTI-TTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSY  312 (331)
Q Consensus       253 ~~~~~~~~~~~i~~~sa~t~si~-~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~  312 (331)
                      +..|...+++.+++.+-+.+.++ +.+.=++|.+.++++.+|..+...++|+++++.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34556678888999887776666 5788899999998888888899999999999999753

Many members are annotated as potential transmembrane proteins.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.02  E-value=2  Score=38.81  Aligned_cols=120  Identities=13%  Similarity=0.172  Sum_probs=75.9

Q ss_pred             HHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhcc--------CCCCCchHHHHHHHHHHHhhhHHh
Q 020068           27 YQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSS--------SAGGAPWWTYWSAGITNTIGPAMG   98 (331)
Q Consensus        27 ~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~   98 (331)
                      .-+..|..+++. |+.  .    ++-+.+.--++.++.........+.        ++++.-++|.+..+.+.+.+..+=
T Consensus       186 fTn~tQd~lf~~-~k~--s----~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI  258 (327)
T KOG1581|consen  186 FTNATQDSLFKK-YKV--S----SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFI  258 (327)
T ss_pred             hHHhHHHHHhcc-CCc--c----HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhhee
Confidence            345568888873 321  1    2333333334444444444333221        234455789999999988876665


Q ss_pred             HhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcc
Q 020068           99 IEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFAL  153 (331)
Q Consensus        99 ~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~  153 (331)
                      +.-++---.-+.+++-.+.=++.++++.+.++.+.++.||.++.+.+.|+..=.+
T Consensus       259 ~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  259 FYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             hhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            5555532222333444455567888999999999999999999999999987654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=90.79  E-value=0.15  Score=47.14  Aligned_cols=74  Identities=9%  Similarity=0.188  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHHHHH
Q 020068          247 FFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLKWRK  320 (331)
Q Consensus       247 ~~~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k~~~  320 (331)
                      +.+|..=+++++.+..+++.++....++.....-++++.++.++-+|++|+.+.++..+-++|+++.+..+.++
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            33444445677788888899998889999999999999999999999999999999999999987766554433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=89.36  E-value=0.85  Score=40.76  Aligned_cols=66  Identities=15%  Similarity=0.286  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          249 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       249 ~~~~~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      -++|-..|....|..+..++|+..-+.--...+++-++|..+++++++..||.|+..+..|+....
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg  157 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG  157 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence            445666677778888888888888888888889999999999999999999999999999987643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.47  E-value=0.63  Score=40.49  Aligned_cols=74  Identities=11%  Similarity=0.209  Sum_probs=57.4

Q ss_pred             CchHHHHHHHHHHHhhhHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhc
Q 020068           79 APWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFA  152 (331)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~  152 (331)
                      .-++++..++++.+.+.++-+.-..+-..-+-.++-.+.-.|+.+.+.++++...+.+||++..+++.|+..=.
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            34677888888888888877766665433333444555667899999999999999999999999999987644

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.03  E-value=3.2  Score=37.05  Aligned_cols=136  Identities=15%  Similarity=0.131  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC------CCCchHHHH
Q 020068           12 LLLAFCVAGIWSAYIYQGILQETLSTKRFGPDGKRFQHLAFLNLAQNVVCLIWSYIMLKLWSSSA------GGAPWWTYW   85 (331)
Q Consensus        12 ~~~~~~~~~i~~~~~~~~~l~e~i~~~~~~~~~~~f~~p~~lt~~q~~~~~l~~~~~~~~~~~~~------~~~~~~~~~   85 (331)
                      +..+..+.|...+=..-|=+||+.+|..++.+.+       ++++-..++.+..+......+.-.      -..|++.|=
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~E-------mvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG  261 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSE-------MVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG  261 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcce-------EEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH
Confidence            4455666677777777888999999865543322       233333444444443333333211      134555432


Q ss_pred             ---HHHHHHHhh--hHHhHhhhcccchhHHHHHhhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhccccC
Q 020068           86 ---SAGITNTIG--PAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMKT  156 (331)
Q Consensus        86 ---~~~~~~~~~--~~~~~~sl~~i~~~~~~~~ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~~  156 (331)
                         ..+.....+  ..+....+-  ...++.++-...-..+.+++++++.|+++..-.-+.++++.|+.+=.+++.
T Consensus       262 y~~~~s~~gylG~~~VLalI~~f--GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  262 YAFLFSLAGYLGIVFVLALIKLF--GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHh--chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence               222221111  222222221  222333333333446788999999999999999999999999999888764

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=86.12  E-value=0.94  Score=38.34  Aligned_cols=61  Identities=7%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          254 AVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       254 ~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      +.+++.+..++++.+|+.++-...-.+.+..+++++++||++...+++..++.+.|+..-+
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmia  124 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIA  124 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEE
Confidence            3456788889999999999999999999999999999999999888888888888865543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.88  E-value=24  Score=32.27  Aligned_cols=135  Identities=10%  Similarity=-0.032  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHhhhchHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHhhhCchHHHHHHHHHHH
Q 020068          173 YGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNLFYMFGWPHGSGFEAIQFCKQHPEAAWDIFFYCLC  252 (331)
Q Consensus       173 ~~l~l~a~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (331)
                      ...++...+++.+..+..|....+|+-....-++.++++.+.+.....-.   . .+.+.-.+....+.-|.   -.++.
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~---~-~lv~~~~l~~~~~kk~~---P~~~l   86 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR---L-GLVNFRPLDLRTAKKWF---PVSLL   86 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH---h-ceeecCCcChHHHHHHc---cHHHH
Confidence            44444555555556667777777773233455566888877766654332   1 11110001111111221   11111


Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHH
Q 020068          253 GAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQI  314 (331)
Q Consensus       253 ~~~~~~~~~~~i~~~sa~t~si~~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~  314 (331)
                      -+...+.-...+++.+-....+...+.++.+.+...++||..++..-|.......+|...+.
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            11112233456788888888888889999999999999999999999999988888866543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	331
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.52
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.42
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.2
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.17

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.52  E-value=1.2e-07  Score=74.92  Aligned_cols=66  Identities=12%  Similarity=0.080  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHHH
Q 020068          252 CGAVGQNFIFLTISRFGSLTNTTI-TTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYLK  317 (331)
Q Consensus       252 ~~~~~~~~~~~~i~~~sa~t~si~-~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~k  317 (331)
                      +..++++++.+++++.++.++..+ ..+.|+++.++|+++|||++|+.+++|+++++.|+++....+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            445777889999999999998888 899999999999999999999999999999999999877643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.42  E-value=3.1e-06  Score=64.39  Aligned_cols=72  Identities=19%  Similarity=0.224  Sum_probs=62.6

Q ss_pred             HHHHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcccc
Q 020068           84 YWSAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMK  155 (331)
Q Consensus        84 ~~~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~  155 (331)
                      .+...+++..+..+...+++++|.+.+-.+ ....|+.+.+++.+++||++++++++++.++++|+.+....+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            333444677888889999999999988666 899999999999999999999999999999999999987644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.20  E-value=2.9e-06  Score=66.98  Aligned_cols=70  Identities=20%  Similarity=0.252  Sum_probs=50.6

Q ss_pred             HHHHHHHhhhHHhHhhhcccchhHHHHH-hhcchHHHHHHHHHhhccccCchhHHHHHHHhhhhhhhcccc
Q 020068           86 SAGITNTIGPAMGIEALKYISYPAQVLA-KSSKMIPVMLMGTLVYGIRYTLPEYICTLLVAGGVSSFALMK  155 (331)
Q Consensus        86 ~~~~~~~~~~~~~~~sl~~i~~~~~~~~-ks~~pi~v~l~~~l~~~e~~~~~~~~~~~~i~~Gv~l~~~~~  155 (331)
                      ...+++..+..+.+.+++++|.+.+..+ .+..|+.++++++++++|+++++++++++++++|+.+....+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344677888999999999999977666 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.17  E-value=6.3e-06  Score=62.70  Aligned_cols=65  Identities=12%  Similarity=0.081  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHhcCCCCCchhhhhHhHHHHHHHHHHHH
Q 020068          252 CGAVGQNFIFLTISRFGSLTNTTI-TTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIYL  316 (331)
Q Consensus       252 ~~~~~~~~~~~~i~~~sa~t~si~-~~l~~v~tills~~~f~e~~t~~~~~G~~lv~~Gv~~~~~~  316 (331)
                      +...+++++.+++++.+..++..+ ..+.++.+.++|+++|||++|+.+++|+++++.|+......
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344667788889999999998777 89999999999999999999999999999999999886543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00