Citrus Sinensis ID: 020216

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDLADIPLPE
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHEEEcccHHHHHccccccccccccHHHHHHHHHccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHEccccHHHHHEccEccccccccHHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHcEEEEEccEEEEEEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHcccccccccccccccccHHHHHcccccc
Coil and Loop (DISEMBL)
MEGIGQVRKLEMLITVLVFIMAACFfgemsyvkppaadvlkgmfvpklsgqgatGDAIALLGALVMPHNLFLHSALVlsrkvpnsvrgINDACRFFLIESGLALLVAFLINVAVISVSGTVCSaanlsydnkhqcsditlNSASFLLQNVLGKSSKIVYAIALLAsgqsstitgTYAGQYIMQMILSFElpfalipllkfsssatkmgphknsIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLihnslpkvgnVFIGIIVFPLMAVYMIAVIYLTFRkdtvvtfidptkddpaaqtrmetglgnpnateldrvhyredladiplpe
Flexible Loop (DISEMBL)
megigqvrKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTkddpaaqtrmetglgnpnateldrvhYREDLADIPLPE
Low Complexity Region (SEG)
MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRliiviswilglgiiginiYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDLADIPLPE
Disordered region (IsUnstruct)
*****QVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFID****************************************
Disordered Region (DISOPRED)
****GQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALV***************CRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFI***************************VHYREDLADIPLP*
Disordered Region (DISEMBL)
MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDLADIPLPE
Disordered Region (DISPRO)
MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKD*********************RVHYREDLADIPLP*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDLADIPLPE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
Q8H4H5	538	Metal transporter Nramp5	yes	no	0.966	0.591	0.614	1e-120
Q0D7E4	518	Metal transporter Nramp1	no	no	0.920	0.584	0.573	1e-108
Q6ZG85	545	Metal transporter NRAT1 O	no	no	0.942	0.568	0.510	1e-96
Q9SAH8	532	Metal transporter Nramp1	yes	no	0.881	0.545	0.534	5e-91
Q9S9N8	527	Metal transporter Nramp6	no	no	0.927	0.578	0.495	2e-90
Q653V6	550	Metal transporter Nramp3	no	no	0.954	0.570	0.505	9e-90
Q5QN13	550	Metal transporter Nramp4	no	no	0.857	0.512	0.484	2e-81
P49281	568	Natural resistance-associ	yes	no	0.689	0.399	0.340	3e-30
Q10Q65	524	Metal transporter Nramp2	no	no	0.750	0.471	0.336	1e-29
O54902	568	Natural resistance-associ	yes	no	0.696	0.403	0.322	1e-29

>sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5 OS=Oryza sativa subsp. japonica GN=NRAMP5 PE=2 SV=1

 Score =  432 bits (1110), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/368 (61%), Positives = 263/368 (71%), Gaps = 50/368 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE LI++LVF+MAACFFGE+S VKPPA +V+KG+F+P+L+G GAT DAIALLGALVM
Sbjct: 176 VRKLEFLISMLVFVMAACFFGELSIVKPPAKEVMKGLFIPRLNGDGATADAIALLGALVM 235

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK P SVRGI D CRFFL ESG AL VA LIN+AV+SVSGT CS+AN
Sbjct: 236 PHNLFLHSALVLSRKTPASVRGIKDGCRFFLYESGFALFVALLINIAVVSVSGTACSSAN 295

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS ++  +C++++L+++SFLL+NVLGKSS IVY +ALLASGQSSTITGTYAGQYIMQ   
Sbjct: 296 LSQEDADKCANLSLDTSSFLLKNVLGKSSAIVYGVALLASGQSSTITGTYAGQYIMQGFL 355

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 356 DIRMRKWLRNLMTRTIAIAPSLIVSIIGGSRGAGRLIIIASMILSFELPFALIPLLKFSS 415

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S +KMGPHKNSIY   IIV SW LGL IIGIN+Y+LST FV WLIHN LPK  NV +G  
Sbjct: 416 SKSKMGPHKNSIY---IIVFSWFLGLLIIGINMYFLSTSFVGWLIHNDLPKYANVLVGAA 472

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDR-VHYRED 321
           VFP M VY++AV+YLT RKD+VVTF+       AA    E       A + D  + YR+D
Sbjct: 473 VFPFMLVYIVAVVYLTIRKDSVVTFV--ADSSLAAVVDAEKADAGDLAVDDDEPLPYRDD 530

Query: 322 LADIPLPE 329
           LADIPLP 
Sbjct: 531 LADIPLPR 538

Probable metal transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q0D7E4|NRAM1_ORYSJ Metal transporter Nramp1 OS=Oryza sativa subsp. japonica GN=NRAMP1 PE=2 SV=1

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/352 (57%), Positives = 251/352 (71%), Gaps = 49/352 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+++ +LVF+MA CFF EMS VKPP  +VL+G+F+P+LSG GATGD+IALLGALVM
Sbjct: 167 VRKLEVVVALLVFVMAGCFFVEMSIVKPPVNEVLQGLFIPRLSGPGATGDSIALLGALVM 226

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSR  P S +G+ D CRFFL ESG+AL VA L+N+A+ISVSGTVC+A N
Sbjct: 227 PHNLFLHSALVLSRNTPASAKGMKDVCRFFLFESGIALFVALLVNIAIISVSGTVCNATN 286

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS ++  +CSD+TL+S+SFLL+NVLGKSS  VY +ALLASGQSSTITGTYAGQY+MQ   
Sbjct: 287 LSPEDAVKCSDLTLDSSSFLLRNVLGKSSATVYGVALLASGQSSTITGTYAGQYVMQGFL 346

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 347 DIKMKQWLRNLMTRSIAIVPSLIVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSS 406

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+ KMG +KNSIY   I+  SW+LG  IIGINIY+LST  V W++HN+LP   NV IGI+
Sbjct: 407 SSNKMGENKNSIY---IVGFSWVLGFVIIGINIYFLSTKLVGWILHNALPTFANVLIGIV 463

Query: 263 VFPLMAVYMIAVIYLTFRKDTV--VTFIDPTKDDPAAQTRMETGLGNPNATE 312
           +FPLM +Y++AVIYLTFRKDTV  V+  +    D   + ++ T + + ++ E
Sbjct: 464 LFPLMLLYVVAVIYLTFRKDTVKFVSRRELQAGDDTEKAQVATCVADEHSKE 515

Probable metal transporter that may participate in the control of iron homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6ZG85|NRAT1_ORYSJ Metal transporter NRAT1 OS=Oryza sativa subsp. japonica GN=NRAT1 PE=2 SV=1

 Score =  353 bits (906), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 187/366 (51%), Positives = 240/366 (65%), Gaps = 56/366 (15%)

Query: 8   RKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMP 67
           RKLE +I   +F MAACFFGE+SY++P A +V+KGMFVP L G+GA  +AIAL GA++ P
Sbjct: 184 RKLEFIIAAFMFTMAACFFGELSYLRPSAGEVVKGMFVPSLQGKGAAANAIALFGAIITP 243

Query: 68  HNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANL 127
           +NLFLHSALVLSRK P S + I  ACR+FLIE  LA +VAFLINV+V+ V+G++C+A NL
Sbjct: 244 YNLFLHSALVLSRKTPRSDKSIRAACRYFLIECSLAFIVAFLINVSVVVVAGSICNANNL 303

Query: 128 SYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ---- 183
           S  + + C D+TL S   LL+NVLG+SS +VYA+ALLASGQS+TI+ T+AGQ IMQ    
Sbjct: 304 SPADANTCGDLTLQSTPLLLRNVLGRSSSVVYAVALLASGQSTTISCTFAGQVIMQGFLD 363

Query: 184 ----------------------------------------MILSFELPFALIPLLKFSSS 203
                                                   MILSFELPFALIPLLKF +S
Sbjct: 364 MKMKNWVRNLITRVIAIAPSLIVSIVSGPSGAGKLIILSSMILSFELPFALIPLLKFCNS 423

Query: 204 ATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIV 263
           + K+GP K SIY    +VI+WIL   +I +N Y+L   +VDWL+HN+LPK  N  I ++V
Sbjct: 424 SKKVGPLKESIYT---VVIAWILSFALIVVNTYFLVWTYVDWLVHNNLPKYANGLISVVV 480

Query: 264 FPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNP-----NATELDRVHY 318
           F LMA Y++AV+YLTFRKDTV T++ P  +   AQ ++E G G P      A E     Y
Sbjct: 481 FALMAAYLVAVVYLTFRKDTVATYV-PVPER--AQAQVEAG-GTPVVDASAADEDQPAPY 536

Query: 319 REDLAD 324
           R+DLAD
Sbjct: 537 RKDLAD 542

Metal transporter that transports the trivalent cation aluminum (Al(3+)), but does not seem to transport divalent cations such as iron (Fe(2+)), manganese (Mg(2+)) or Cadmium (Cd(2+)). Involved in Al tolerance by taking up Al in root cells, where it is detoxified by chelation with organic acid anions and sequestration into the vacuoles.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SAH8|NRAM1_ARATH Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=1 SV=1

 Score =  334 bits (857), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 180/337 (53%), Positives = 225/337 (66%), Gaps = 47/337 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE LI  LVF +A CFF E+ Y KP   +VL G+FVP+L G GATG AI+LLGA+VM
Sbjct: 178 VRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATGLAISLLGAMVM 237

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+P S  GI +ACRF+LIESGLAL+VAFLINV+VISVSG VC+A N
Sbjct: 238 PHNLFLHSALVLSRKIPRSASGIKEACRFYLIESGLALMVAFLINVSVISVSGAVCNAPN 297

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +++  C D+ LN ASFLL+NV+GK S  ++AIALLASGQSSTITGTYAGQY+MQ   
Sbjct: 298 LSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFL 357

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFAL+PLLKF+S
Sbjct: 358 DLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELPFALVPLLKFTS 417

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
             TKMG H N +    I  ++W++G  I+GINIYYL + F+  LIH+ +  +  VF GI+
Sbjct: 418 CKTKMGSHVNPMA---ITALTWVIGGLIMGINIYYLVSSFIKLLIHSHMKLILVVFCGIL 474

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQT 299
            F  +A+Y+ A+ YL FRK+ V T +  ++D    +T
Sbjct: 475 GFAGIALYLAAIAYLVFRKNRVATSLLISRDSQNVET 511

High affinity manganese (Mn) transporter involved in Mn acquisition from the soil. Required for Mn uptake into the root in conditions of low Mn availability. Can transport iron (Fe), cadmium (Cd) and cobalt (Co).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/367 (49%), Positives = 237/367 (64%), Gaps = 62/367 (16%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           +RKLE LI  LVF +A CFF E+ Y KP   +VL G+FVP+L G GATG AI+LLGA+VM
Sbjct: 170 IRKLEFLIAFLVFTIALCFFVELHYSKPDPKEVLYGLFVPQLKGNGATGLAISLLGAMVM 229

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+P SV GI +ACR++LIESGLAL+VAFLINV+VISVSG VC+A++
Sbjct: 230 PHNLFLHSALVLSRKIPRSVTGIKEACRYYLIESGLALMVAFLINVSVISVSGAVCNASD 289

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +++  C D+ LN ASFLL+NV+GK S  ++AIALLASGQSSTITGTYAGQY+MQ   
Sbjct: 290 LSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFL 349

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFAL+PLLKF+S
Sbjct: 350 DLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELPFALVPLLKFTS 409

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S TKMG H NS+   +I  ++WI+G  I+GINIYYL + F+  L+H+ +  V  VF+G++
Sbjct: 410 SKTKMGSHANSL---VISSVTWIIGGLIMGINIYYLVSSFIKLLLHSHMNLVAIVFLGVL 466

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDL 322
            F  +A Y+ A+ YL  RK+               +    T   + + ++ +    RED+
Sbjct: 467 GFSGIATYLAAISYLVLRKN---------------RESSSTHFLDFSNSQTEETLPREDI 511

Query: 323 ADIPLPE 329
           A++ LP 
Sbjct: 512 ANMQLPN 518

Probable intracellular cadmium (Cd) transporter that participates in the distribution or availability of Cd within the cell.

Arabidopsis thaliana (taxid: 3702)

>sp|Q653V6|NRAM3_ORYSJ Metal transporter Nramp3 OS=Oryza sativa subsp. japonica GN=NRAMP3 PE=2 SV=1

 Score =  330 bits (846), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 187/370 (50%), Positives = 237/370 (64%), Gaps = 56/370 (15%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE LI +LV ++A CF  E+ Y KP +++V++G+FVP+L G GATG AI+LLGA+VM
Sbjct: 182 VRKLEFLIAILVSLIATCFLVELGYSKPNSSEVVRGLFVPELKGNGATGLAISLLGAMVM 241

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRKVP SV GI +ACRF++IES  AL +AFLIN+++ISVSG VC + N
Sbjct: 242 PHNLFLHSALVLSRKVPRSVHGIKEACRFYMIESAFALTIAFLINISIISVSGAVCGSDN 301

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +++  CSD+ LN ASFLL+NVLG  S  ++A+ALLASGQSSTITGTYAGQY+MQ   
Sbjct: 302 LSPEDQMNCSDLDLNKASFLLKNVLGNWSSKLFAVALLASGQSSTITGTYAGQYVMQGFL 361

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFAL+PLLKF+S
Sbjct: 362 DLRMTPWIRNLLTRSLAILPSLIVSIIGGSSAAGQLIIIASMILSFELPFALVPLLKFTS 421

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S TKMG H NS   + I VI+W +G  I+ IN Y+L T FV  L+HN L  V  VF GI 
Sbjct: 422 SRTKMGQHTNS---KAISVITWGIGSFIVVINTYFLITSFVKLLLHNGLSTVSQVFSGIF 478

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRV--HY-R 319
            F  M +YM A++YL FRK+   T      D   +  R+   +G   ATE +    H  R
Sbjct: 479 GFLGMLIYMAAILYLVFRKNRKATLPLLEGD---STVRI---VGRDTATEGEGSLGHLPR 532

Query: 320 EDLADIPLPE 329
           ED++ + LP+
Sbjct: 533 EDISSMQLPQ 542

Probable metal transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5QN13|NRAM4_ORYSJ Metal transporter Nramp4 OS=Oryza sativa subsp. japonica GN=NRAMP4 PE=2 SV=1

 Score =  302 bits (773), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/332 (48%), Positives = 213/332 (64%), Gaps = 50/332 (15%)

Query: 1   MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIAL 60
           ++G G  RK+E  I+VL+ +MA CFF E+  V PPA  V++G+F+P+  G  +T DA+A+
Sbjct: 199 LQGYGA-RKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGLFIPRPKGDYSTSDAVAM 257

Query: 61  LGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGT 120
            G+LV+PHNLFLHS+LVL+RK+P + +G  DA  FFL+E+ LAL +A L+NVA++S+SGT
Sbjct: 258 FGSLVVPHNLFLHSSLVLTRKMPYTSKGRKDASTFFLLENALALFIALLVNVAIVSISGT 317

Query: 121 VCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQY 180
           +C A NLS+ +   CS +TLNS   LL+N+LGKSS  VY +ALL SGQS  +  +YAGQY
Sbjct: 318 IC-ANNLSFADTSTCSSLTLNSTYVLLKNILGKSSSTVYGVALLVSGQSCMVATSYAGQY 376

Query: 181 IMQ------------------------------------------MILSFELPFALIPLL 198
           IMQ                                          ++LSF LPFALIPL+
Sbjct: 377 IMQGFSGMRKCIIYLVAPCFTLLPSLIICSIGGTLRVHRIINIAAIVLSFVLPFALIPLI 436

Query: 199 KFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVF 258
           KFSSS T +GP+KN+     II I+WIL L IIGINIY+  T FV WL+H+ LP+V N  
Sbjct: 437 KFSSSCTNIGPYKNATS---IIRIAWILSLVIIGINIYFFCTSFVAWLVHSDLPRVVNAI 493

Query: 259 IGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDP 290
           I  +VFP MA Y+ A+IYL FRK   V   DP
Sbjct: 494 ISSLVFPFMAAYIAALIYLAFRK---VNLSDP 522

Probable metal transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P49281|NRAM2_HUMAN Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 144/297 (48%), Gaps = 70/297 (23%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSG--QGATGDAIALLGAL 64
           +RKLE     L+ IMA  F  E   VKP  + VLKGMFVP  SG        A+ ++GA+
Sbjct: 204 LRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLKGMFVPSCSGCRTPQIEQAVGIVGAV 263

Query: 65  VMPHNLFLHSALVLSRKV-PNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGT--- 120
           +MPHN++LHSALV SR+V  N+ + + +A ++F IES +AL V+F+INV V+SV      
Sbjct: 264 IMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFF 323

Query: 121 ---------VCS------AANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLA 165
                    VC+      A     DN     DI       +L    G ++  ++A+ +LA
Sbjct: 324 GKTNEQVVEVCTNTSSPHAGLFPKDNSTLAVDIY--KGGVVLGCYFGPAALYIWAVGILA 381

Query: 166 SGQSSTITGTYAGQYIMQMIL--------------------------------------- 186
           +GQSST+TGTY+GQ++M+  L                                       
Sbjct: 382 AGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHLTGMNDF 441

Query: 187 -----SFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYL 238
                S +LPFALIP+L F+S    M    N +  R   +   IL L I  IN+Y++
Sbjct: 442 LNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWR---IAGGILVLIICSINMYFV 495

Important in metal transport, in particular iron. Can also transport manganese, cobalt, cadmium, nickel, vanadium and lead. Involved in apical iron uptake into duodenal enterocytes. Involved in iron transport from acidified endosomes into the cytoplasm of erythroid precursor cells. May play an important role in hepatic iron accumulation and tissue iron distribution.

Homo sapiens (taxid: 9606)

>sp|Q10Q65|NRAM2_ORYSJ Metal transporter Nramp2 OS=Oryza sativa subsp. japonica GN=NRAMP2 PE=2 SV=1

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 71/318 (22%)

Query: 7   VRKLEMLITVLVFIMAACF---FGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGA 63
           VRKLE    VL+ +MA  F   FGE    KP   ++L G+ VPKLS +     A+ ++G 
Sbjct: 204 VRKLEAFFGVLIAVMAVSFAIMFGE---TKPSGKELLIGLVVPKLSSR-TIKQAVGIVGC 259

Query: 64  LVMPHNLFLHSALVLSRKV-PNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVC 122
           ++MPHN+FLHSALV SRK+  N    + +A  ++ IES LAL+V+F IN+ V +V     
Sbjct: 260 IIMPHNVFLHSALVQSRKIDTNKKSRVQEAVFYYNIESILALIVSFFINICVTTVFAK-- 317

Query: 123 SAANLSYDNKHQCSDITLNSASFLLQNVLGKSS---KIVYAIALLASGQSSTITGTYAGQ 179
                 +    Q   I L +A   LQ   G +      ++AI LLASGQSSTITGTYAGQ
Sbjct: 318 -----GFYGSEQADGIGLENAGQYLQQKYGTAFFPILYIWAIGLLASGQSSTITGTYAGQ 372

Query: 180 YIM----------------------------------------------QMILSFELPFA 193
           ++M                                               ++ S ++PFA
Sbjct: 373 FVMGGFLNLRLKKWLRAMITRSFAIIPTMIVALFFDTEDPTMDILNEALNVLQSIQIPFA 432

Query: 194 LIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIY----YLSTGFVDWLIHN 249
           LIPL+   S    MG     +   +  VISWI+ + ++ IN Y    + +T     L+ +
Sbjct: 433 LIPLITLVSKEQVMGSF---VVGPITKVISWIVTVFLMLINGYLILSFYATEVRGALVRS 489

Query: 250 SLPKVGNVFIGIIVFPLM 267
           SL  V  V++  IV+ +M
Sbjct: 490 SLCVVLAVYLAFIVYLIM 507

Probable metal transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O54902|NRAM2_RAT Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 144/295 (48%), Gaps = 66/295 (22%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSG--QGATGDAIALLGAL 64
           +RKLE     L+ IMA  F  E   VKP  + VL+GMFVP  SG        A+ ++GA+
Sbjct: 204 LRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLRGMFVPSCSGCHTPQVEQAVGIVGAV 263

Query: 65  VMPHNLFLHSALVLSRKVPNSVRG-INDACRFFLIESGLALLVAFLINVAVISVSGT--- 120
           +MPHN++LHSALV SR+V  + +  + +A ++F IES +AL V+F+INV V+SV      
Sbjct: 264 IMPHNMYLHSALVKSRQVNRANKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFF 323

Query: 121 ---------VCSAANLS----YDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASG 167
                    VC  ++      + N +    + +     +L    G ++  ++A+ +LA+G
Sbjct: 324 EKTNEQVVEVCRNSSSPHADLFPNDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAG 383

Query: 168 QSSTITGTYAGQYIMQMIL----------------------------------------- 186
           QSST+TGTY+GQ++M+  L                                         
Sbjct: 384 QSSTMTGTYSGQFVMEGFLNLKWSRFARVILTRSIAIIPTLLVAVFQDVEHLTGMNDFLN 443

Query: 187 ---SFELPFALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYL 238
              S +LPFALIP+L F+S    M    N I  R   +   IL L +  IN+Y++
Sbjct: 444 VLQSLQLPFALIPILTFTSLRPVMSEFSNGIGWR---IAGGILVLLVCSINMYFV 495

Important in metal transport, in particular iron. Can also transport zinc, manganese, cobalt, cadmium, copper, nickel and lead. Involved in apical iron uptake into duodenal enterocytes. Involved in iron transport from acidified endosomes into the cytoplasm of erythroid precursor cells. May play an important role in hepatic iron accumulation and tissue iron distribution.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
224084948	518	nramp transporter [Populus trichocarpa]	0.972	0.617	0.730	1e-146
224084952	585	nramp transporter [Populus trichocarpa]	0.972	0.547	0.719	1e-143
225459621	542	PREDICTED: metal transporter Nramp5 [Vit	0.972	0.590	0.722	1e-143
402233826	545	natural resistance-associated macrophage	0.969	0.585	0.711	1e-139
350537931	530	root-specific metal transporter [Solanum	0.948	0.588	0.711	1e-139
449464186	549	PREDICTED: metal transporter Nramp5-like	0.969	0.581	0.697	1e-138
399152616	534	metal transporter Nramp1 [Solanum torvum	0.948	0.584	0.701	1e-137
356515921	544	PREDICTED: metal transporter Nramp5-like	0.969	0.586	0.705	1e-136
147835959	332	hypothetical protein VITISV_004328 [Viti	0.954	0.945	0.735	1e-135
399152618	531	metal transporter Nramp1 [Solanum melong	0.948	0.587	0.698	1e-135

>gi|224084948|ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1| nramp transporter [Populus trichocarpa]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/368 (73%), Positives = 292/368 (79%), Gaps = 48/368 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI VLVF+MAACFFGEMSYVKP A DVLKGMF+PKLSGQGATGDAIALLGAL+M
Sbjct: 154 VRKLELLIAVLVFVMAACFFGEMSYVKPSATDVLKGMFIPKLSGQGATGDAIALLGALIM 213

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+PNSVRGINDACR+FLIESG AL +AFLIN+AVISVSGTVCSA N
Sbjct: 214 PHNLFLHSALVLSRKMPNSVRGINDACRYFLIESGFALFIAFLINLAVISVSGTVCSAQN 273

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +N  +C D+TLNSASFLLQNVLGKSS  +YAIALLASGQSSTITGTYAGQYIMQ   
Sbjct: 274 LSSENADRCGDLTLNSASFLLQNVLGKSSSKIYAIALLASGQSSTITGTYAGQYIMQGFL 333

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 334 ELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSS 393

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S TKMGPHKNSIY   IIVISWILGLGIIG+NIYYLSTGFV WLI N+LPKVGNVFIGII
Sbjct: 394 STTKMGPHKNSIY---IIVISWILGLGIIGVNIYYLSTGFVGWLIDNNLPKVGNVFIGII 450

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGL-GNPNATELDRVHYRED 321
           VFPLMA+Y++AVIYLTFRKD+VVTF+ P K+DP  Q  ME GL  +    E++RV YRED
Sbjct: 451 VFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQANMENGLTKSTEGPEMERVPYRED 510

Query: 322 LADIPLPE 329
           LADIPLPE
Sbjct: 511 LADIPLPE 518

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084952|ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1| nramp transporter [Populus trichocarpa]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/371 (71%), Positives = 289/371 (77%), Gaps = 51/371 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI VLVF+MAACFFGEMSYVKP A DVLKGMF+PKLSGQGATGDAIALLGAL+M
Sbjct: 218 VRKLELLIAVLVFVMAACFFGEMSYVKPSATDVLKGMFIPKLSGQGATGDAIALLGALIM 277

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+PNSVRGINDAC +FLIESG AL +AFLIN+AVISVSGTVCSA N
Sbjct: 278 PHNLFLHSALVLSRKMPNSVRGINDACHYFLIESGFALFIAFLINLAVISVSGTVCSAQN 337

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIM---- 182
           LS +N  +C D+TLNSASFLLQNVLGKSS  +YAIALLASGQSSTITGTYAGQYIM    
Sbjct: 338 LSSENADRCGDLTLNSASFLLQNVLGKSSSKIYAIALLASGQSSTITGTYAGQYIMQGFL 397

Query: 183 -------------------------------------------QMILSFELPFALIPLLK 199
                                                      QMILSFELPFALIPLLK
Sbjct: 398 ELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGAGRLIIIASVLQMILSFELPFALIPLLK 457

Query: 200 FSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFI 259
           FSSS TKMGPHKNSIY   IIVISWILGLGIIGINIYYLSTGFV WLI N+LPKVGNVFI
Sbjct: 458 FSSSTTKMGPHKNSIY---IIVISWILGLGIIGINIYYLSTGFVGWLIDNNLPKVGNVFI 514

Query: 260 GIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGL-GNPNATELDRVHY 318
            IIVFPLMA+Y++AVIYLTFRKD+VVTF+ P K+DP  Q  ME GL  +    E++RV Y
Sbjct: 515 AIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQANMENGLTKSTEGPEMERVPY 574

Query: 319 REDLADIPLPE 329
           R DLADIPLPE
Sbjct: 575 RGDLADIPLPE 585

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459621|ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera] gi|302141782|emb|CBI18985.3| unnamed protein product [Vitis vinifera]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/368 (72%), Positives = 287/368 (77%), Gaps = 48/368 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI VLVFIMA CFFGEMSYVKPPA  VLKGMF+PKL GQGATGDAIALLGALVM
Sbjct: 178 VRKLELLIAVLVFIMAGCFFGEMSYVKPPATGVLKGMFIPKLKGQGATGDAIALLGALVM 237

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRKVPNSVRGIN+ACR+FLIESGLAL VAFLINVAV+SVSGTVCSA N
Sbjct: 238 PHNLFLHSALVLSRKVPNSVRGINEACRYFLIESGLALFVAFLINVAVVSVSGTVCSADN 297

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +N  QC+D+ LNSASFLL+NVLG SSK+VYAIAL ASGQSSTITGTYAGQ+IMQ   
Sbjct: 298 LSQENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIALFASGQSSTITGTYAGQFIMQGFL 357

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 358 DIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGAGRLIIIASMILSFELPFALIPLLKFSS 417

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S TKMGPHKNSIY   IIVISWILG GIIGINIYYLST FV WL+HN+LPKVGNVFIGII
Sbjct: 418 SNTKMGPHKNSIY---IIVISWILGFGIIGINIYYLSTSFVGWLLHNNLPKVGNVFIGII 474

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNAT-ELDRVHYRED 321
           VFPLMA+Y+++VIYLT RKDTVVTFI+P K+DP  Q  ME G    +   EL  V YRED
Sbjct: 475 VFPLMAIYILSVIYLTTRKDTVVTFIEPEKNDPNVQNHMENGFDQTDGVFELGHVPYRED 534

Query: 322 LADIPLPE 329
           LADIPLP+
Sbjct: 535 LADIPLPK 542

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|402233826|gb|AFQ37304.1| natural resistance-associated macrophage protein 1 [Arachis hypogaea]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/368 (71%), Positives = 288/368 (78%), Gaps = 49/368 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI+ LVF+MAACFFGEMSYVKPPA+ V+KGMF PKLSGQGAT DAIALLGALVM
Sbjct: 182 VRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFTPKLSGQGATADAIALLGALVM 241

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRKVPN+VRGINDAC++FLIESG AL VAFLINVAVISVSGTVCSA+N
Sbjct: 242 PHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASN 301

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS  N   C+D+TLNSASFLL+NVLG+SS  +YAIALLASGQSS ITGTYAGQYIMQ   
Sbjct: 302 LSSANTDHCTDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFL 361

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 362 DLKMKRWIRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSS 421

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+TKMGPHKNS+   +IIVISWILGLGIIGIN+YYL T FVDWLIHNSLPKVGNVFIGII
Sbjct: 422 SSTKMGPHKNSM---IIIVISWILGLGIIGINVYYLITAFVDWLIHNSLPKVGNVFIGII 478

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNAT-ELDRVHYRED 321
           VFPLMA+Y+ +VIYLTFRKDTV T+I+ TKD+ A QT +E G  N N   EL+    RED
Sbjct: 479 VFPLMAIYVGSVIYLTFRKDTVQTYIE-TKDNTAMQTHVEKGFMNSNGELELNHGPIRED 537

Query: 322 LADIPLPE 329
           LADIPLPE
Sbjct: 538 LADIPLPE 545

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350537931|ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum] gi|30267434|gb|AAP21818.1| root-specific metal transporter [Solanum lycopersicum]

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/368 (71%), Positives = 286/368 (77%), Gaps = 56/368 (15%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI +LVF+MAACFFGEMSYVKPPA ++ KGMF+PKL+G GAT DAIALLGALVM
Sbjct: 174 VRKLELLIAILVFVMAACFFGEMSYVKPPANELFKGMFIPKLNGDGATADAIALLGALVM 233

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+PNSVRGINDAC+FFLIESG AL V+FLINVAV+SVSGTVC A N
Sbjct: 234 PHNLFLHSALVLSRKIPNSVRGINDACKFFLIESGFALFVSFLINVAVVSVSGTVCGADN 293

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS  NK  CSDITLNSASFLL+NVLGKSS  VYAIALLASGQSSTITGTYAGQ+IMQ   
Sbjct: 294 LSDQNKESCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFL 353

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 354 DLKMKTWLRNLFTRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSS 413

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+TK+GPHKNSIY   IIVISWILGLGIIGINIYYLST FV WLI N+LPKVGNV IGI+
Sbjct: 414 SSTKLGPHKNSIY---IIVISWILGLGIIGINIYYLSTAFVGWLISNNLPKVGNVLIGIV 470

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATEL-DRVHYRED 321
           VFPLMA+Y++AVIYL FRKD VVT+IDP KDD      ME G+   N+ EL DRV YRED
Sbjct: 471 VFPLMAIYILAVIYLMFRKDKVVTYIDPIKDD-----HMENGI---NSMELVDRVPYRED 522

Query: 322 LADIPLPE 329
           LADIPLP+
Sbjct: 523 LADIPLPQ 530

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464186|ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus] gi|449499093|ref|XP_004160719.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/367 (69%), Positives = 282/367 (76%), Gaps = 48/367 (13%)

Query: 8   RKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMP 67
           RKLE+LI +LVF+MAACFFGEMSYVKPPA+ VLKGMFVPKL G+GAT DAIALLGALVMP
Sbjct: 186 RKLELLIAILVFVMAACFFGEMSYVKPPASGVLKGMFVPKLKGEGATADAIALLGALVMP 245

Query: 68  HNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANL 127
           HNLFLHSALVLSRKVPNSVRGINDACR+FLIESG+AL +AFLINVAV+SVSGTVC+  N+
Sbjct: 246 HNLFLHSALVLSRKVPNSVRGINDACRYFLIESGIALFIAFLINVAVVSVSGTVCTVGNV 305

Query: 128 SYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ---- 183
           +     QCSDITLNSASFLLQNVLGKSS  +YAIAL ASGQSS+ITGTYAGQ+IMQ    
Sbjct: 306 TQTTADQCSDITLNSASFLLQNVLGKSSSTIYAIALFASGQSSSITGTYAGQFIMQGFLD 365

Query: 184 ----------------------------------------MILSFELPFALIPLLKFSSS 203
                                                   MILSFELPFALIPLLKFSSS
Sbjct: 366 LKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSS 425

Query: 204 ATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIV 263
           +TKMGPHKNSIY   IIVISWILGL IIGINIYYLST FVDWLIHN+LPKV NVFIGI V
Sbjct: 426 STKMGPHKNSIY---IIVISWILGLAIIGINIYYLSTAFVDWLIHNNLPKVANVFIGIAV 482

Query: 264 FPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNP-NATELDRVHYREDL 322
           FPLMA Y+ AVIYL FRKD VVT+I+P KDD  AQ  +E+GL N     ++  + +REDL
Sbjct: 483 FPLMAAYIGAVIYLMFRKDRVVTYIEPEKDDAVAQAHLESGLNNSFGPRDVTPLPFREDL 542

Query: 323 ADIPLPE 329
           A IPLPE
Sbjct: 543 AHIPLPE 549

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399152616|dbj|BAM34952.1| metal transporter Nramp1 [Solanum torvum]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/368 (70%), Positives = 283/368 (76%), Gaps = 56/368 (15%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI +LVF+MAACFFGEMSYVKPPA ++ KGMF+PKL G GAT DAIALLGALVM
Sbjct: 178 VRKLELLIAILVFVMAACFFGEMSYVKPPAKELFKGMFIPKLKGDGATADAIALLGALVM 237

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+PNS+RGINDACRFFLIESG AL V+FLINVAV+SVSGTVC A N
Sbjct: 238 PHNLFLHSALVLSRKIPNSIRGINDACRFFLIESGFALFVSFLINVAVVSVSGTVCGADN 297

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS  NK  C+DITLNSASFLL+NVLGKSS  VYAIALLASGQSSTITGTYAGQ+IMQ   
Sbjct: 298 LSEQNKESCNDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFL 357

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 358 DLKMKTWLRNLFTRLIAITPSLVVSIIGGPSGAGRLIIIASMILSFELPFALIPLLKFSS 417

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+TK+GPHKNSIY   IIVISWILGLGIIGINIYYLST FV WL++N LPKVGNV IGI+
Sbjct: 418 SSTKLGPHKNSIY---IIVISWILGLGIIGINIYYLSTAFVGWLLNNHLPKVGNVLIGIV 474

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATEL-DRVHYRED 321
           VFPLMA+Y++AVIYL FRKD VVT+I+P KDD      ME G    N+ EL DRV YRED
Sbjct: 475 VFPLMAIYILAVIYLMFRKDRVVTYINPIKDD-----HMENG---TNSMELVDRVPYRED 526

Query: 322 LADIPLPE 329
           L DIPLP+
Sbjct: 527 LVDIPLPQ 534

Source: Solanum torvum

Species: Solanum torvum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515921|ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Glycine max]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/367 (70%), Positives = 287/367 (78%), Gaps = 48/367 (13%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI++LVF+MA CFFGEMSYVKPPA+ VLKGMFVPKLSGQGATGDAIALLGALVM
Sbjct: 182 VRKLELLISILVFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVM 241

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRKVP+SVRGINDACR+FL+ESG AL VAFLINVA+ISV+GTVCSA N
Sbjct: 242 PHNLFLHSALVLSRKVPSSVRGINDACRYFLMESGFALFVAFLINVAMISVAGTVCSADN 301

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS +N  QCSD+TLNSASFLL+NVLG+SS  +YAIALLASGQSS ITGTYAGQYIMQ   
Sbjct: 302 LSAENADQCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFL 361

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 362 DMRMKRWIRNFVTRCIAIAPSLIVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSS 421

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+TKMGPHKNSI + +I     ILGLGIIGIN+YYLST FV WLIH+SLPKV NVFIGII
Sbjct: 422 SSTKMGPHKNSIIIIVISW---ILGLGIIGINVYYLSTAFVGWLIHSSLPKVANVFIGII 478

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATELDRVHYREDL 322
           VFPLMA+Y+ AVIYLTFRKDTV T+I+ TK++PA QT ME G       EL +V YREDL
Sbjct: 479 VFPLMALYVAAVIYLTFRKDTVKTYIE-TKNEPAMQTHMEKGFMANGQLELSQVPYREDL 537

Query: 323 ADIPLPE 329
           ADIPLP+
Sbjct: 538 ADIPLPQ 544

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835959|emb|CAN63972.1| hypothetical protein VITISV_004328 [Vitis vinifera]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/336 (73%), Positives = 275/336 (81%), Gaps = 22/336 (6%)

Query: 12  MLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLF 71
           MLI  LVFIMA CFF EMSYVKPPA+ V+KGM +PKL G  AT DAIAL GALVMPHNLF
Sbjct: 1   MLIAGLVFIMAGCFFAEMSYVKPPASRVIKGMLIPKLKGSTATTDAIALFGALVMPHNLF 60

Query: 72  LHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDN 131
           LHSALVLSRKVPNSVRG+N+ACR+FLIESG+AL+VAF INVAV+SVSGT+CS  N S +N
Sbjct: 61  LHSALVLSRKVPNSVRGVNEACRYFLIESGMALMVAFCINVAVVSVSGTICSVNNFSREN 120

Query: 132 KHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILSFELP 191
             QCSD+ LNSASFLL+NVLG SSK+VYAIAL ASGQSSTITGTYAGQYIMQMILSFELP
Sbjct: 121 MDQCSDLNLNSASFLLKNVLGGSSKVVYAIALFASGQSSTITGTYAGQYIMQMILSFELP 180

Query: 192 FALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSL 251
           FALIPLLKFSSS+TKMGPHKNSIYV   IV SWILG G++GINIYYL+TGFV+WL+ N L
Sbjct: 181 FALIPLLKFSSSSTKMGPHKNSIYV---IVFSWILGFGLMGINIYYLATGFVNWLLXNDL 237

Query: 252 PKVGNVFIGIIVFPLMAVYMIAVIYLTFRKDTVVTFIDPTKD-----------------D 294
           PKVGNVFIGIIVFPLMAVY++AV+YLTFRKDTVVTFI+  KD                 D
Sbjct: 238 PKVGNVFIGIIVFPLMAVYVLAVLYLTFRKDTVVTFIEAEKDEHSARTHVEKKLEAEKYD 297

Query: 295 PAAQTRMETGLGNPNAT-ELDRVHYREDLADIPLPE 329
            +A+T +E  L N N T EL  +H REDL DI LP 
Sbjct: 298 QSARTHVEKKLDNSNHTFELSHLH-REDLIDIHLPN 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399152618|dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/368 (69%), Positives = 280/368 (76%), Gaps = 56/368 (15%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
           VRKLE+LI +LV +MAACFFGEMSYVKPPA ++ KGMF+PKL G GATGDAIALLGALVM
Sbjct: 175 VRKLELLIAMLVLVMAACFFGEMSYVKPPAKELFKGMFIPKLKGDGATGDAIALLGALVM 234

Query: 67  PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
           PHNLFLHSALVLSRK+PNS+RGINDACRFFLIESG AL ++FLINVAV+SVSGTVC A N
Sbjct: 235 PHNLFLHSALVLSRKIPNSIRGINDACRFFLIESGFALFISFLINVAVVSVSGTVCGAHN 294

Query: 127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ--- 183
           LS  NK  CSDITLNSASFLL+NVLGKSS  VYAIALLASGQSSTITGTYAGQ+IMQ   
Sbjct: 295 LSQQNKESCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFL 354

Query: 184 -----------------------------------------MILSFELPFALIPLLKFSS 202
                                                    MILSFELPFALIPLLKFSS
Sbjct: 355 DLKMKTWLRNLFTRLIAITPSLVVSIIGGPSGAGRLIIIASMILSFELPFALIPLLKFSS 414

Query: 203 SATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGII 262
           S+TK+GPHKNSIY   IIVISWILGLGIIGINIYYLST FV WL++NSLPKVGNV IGI+
Sbjct: 415 SSTKLGPHKNSIY---IIVISWILGLGIIGINIYYLSTAFVGWLLNNSLPKVGNVLIGIL 471

Query: 263 VFPLMAVYMIAVIYLTFRKDTVVTFIDPTKDDPAAQTRMETGLGNPNATEL-DRVHYRED 321
           VFPLMA+Y++AVIYL FRKD VVT+IDP KD       ME G  N    EL D V YRED
Sbjct: 472 VFPLMAIYILAVIYLMFRKDKVVTYIDPIKDH-----HMENGTNN---MELVDPVPYRED 523

Query: 322 LADIPLPE 329
           L  IPLP+
Sbjct: 524 LVHIPLPQ 531

Source: Solanum melongena

Species: Solanum melongena

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
TAIR|locus:2200437	527	NRAMP6 "NRAMP metal ion transp	0.559	0.349	0.679	6.8e-69
UNIPROTKB|Q0D7E4	518	NRAMP1 "Metal transporter Nram	0.559	0.355	0.695	4.5e-66
TAIR|locus:2025677	532	NRAMP1 "natural resistance-ass	0.559	0.345	0.690	4.8e-62
UNIPROTKB|Q6ZG85	545	NRAT1 "Metal transporter NRAT1	0.556	0.335	0.601	1.8e-55
WB|WBGene00004876	562	smf-1 [Caenorhabditis elegans	0.337	0.197	0.429	4.7e-32
TAIR|locus:2124172	530	NRAMP5 [Arabidopsis thaliana (	0.550	0.341	0.407	5.9e-31
TAIR|locus:2158242	512	NRAMP4 "natural resistance ass	0.550	0.353	0.402	3.9e-30
TAIR|locus:2036751	530	NRAMP2 "NRAMP metal ion transp	0.550	0.341	0.381	5e-30
UNIPROTKB|C0H5Y3	432	SLC11A1 "Solute carrier family	0.343	0.261	0.413	2e-28
UNIPROTKB|P49279	550	SLC11A1 "Natural resistance-as	0.343	0.205	0.413	1.3e-27

TAIR|locus:2200437 NRAMP6 "NRAMP metal ion transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
 Identities = 125/184 (67%), Positives = 151/184 (82%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
             +RKLE LI  LVF +A CFF E+ Y KP   +VL G+FVP+L G GATG AI+LLGA+VM
Sbjct:   170 IRKLEFLIAFLVFTIALCFFVELHYSKPDPKEVLYGLFVPQLKGNGATGLAISLLGAMVM 229

Query:    67 PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
             PHNLFLHSALVLSRK+P SV GI +ACR++LIESGLAL+VAFLINV+VISVSG VC+A++
Sbjct:   230 PHNLFLHSALVLSRKIPRSVTGIKEACRYYLIESGLALMVAFLINVSVISVSGAVCNASD 289

Query:   127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMIL 186
             LS +++  C D+ LN ASFLL+NV+GK S  ++AIALLASGQSSTITGTYAGQY+MQ  L
Sbjct:   290 LSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFL 349

Query:   187 SFEL 190
                L
Sbjct:   350 DLRL 353

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015103 "inorganic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=ISS;NAS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS;NAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

GO:0015086 "cadmium ion transmembrane transporter activity" evidence=IDA

GO:0070574 "cadmium ion transmembrane transport" evidence=IDA

GO:0006828 "manganese ion transport" evidence=RCA

GO:0015691 "cadmium ion transport" evidence=RCA

UNIPROTKB|Q0D7E4 NRAMP1 "Metal transporter Nramp1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 128/184 (69%), Positives = 157/184 (85%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
             VRKLE+++ +LVF+MA CFF EMS VKPP  +VL+G+F+P+LSG GATGD+IALLGALVM
Sbjct:   167 VRKLEVVVALLVFVMAGCFFVEMSIVKPPVNEVLQGLFIPRLSGPGATGDSIALLGALVM 226

Query:    67 PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
             PHNLFLHSALVLSR  P S +G+ D CRFFL ESG+AL VA L+N+A+ISVSGTVC+A N
Sbjct:   227 PHNLFLHSALVLSRNTPASAKGMKDVCRFFLFESGIALFVALLVNIAIISVSGTVCNATN 286

Query:   127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMIL 186
             LS ++  +CSD+TL+S+SFLL+NVLGKSS  VY +ALLASGQSSTITGTYAGQY+MQ  L
Sbjct:   287 LSPEDAVKCSDLTLDSSSFLLRNVLGKSSATVYGVALLASGQSSTITGTYAGQYVMQGFL 346

Query:   187 SFEL 190
               ++
Sbjct:   347 DIKM 350

GO:0005381 "iron ion transmembrane transporter activity" evidence=IDA

GO:0034755 "iron ion transmembrane transport" evidence=IDA

TAIR|locus:2025677 NRAMP1 "natural resistance-associated macrophage protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 127/184 (69%), Positives = 149/184 (80%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVM 66
             VRKLE LI  LVF +A CFF E+ Y KP   +VL G+FVP+L G GATG AI+LLGA+VM
Sbjct:   178 VRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATGLAISLLGAMVM 237

Query:    67 PHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAAN 126
             PHNLFLHSALVLSRK+P S  GI +ACRF+LIESGLAL+VAFLINV+VISVSG VC+A N
Sbjct:   238 PHNLFLHSALVLSRKIPRSASGIKEACRFYLIESGLALMVAFLINVSVISVSGAVCNAPN 297

Query:   127 LSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMIL 186
             LS +++  C D+ LN ASFLL+NV+GK S  ++AIALLASGQSSTITGTYAGQY+MQ  L
Sbjct:   298 LSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFL 357

Query:   187 SFEL 190
                L
Sbjct:   358 DLRL 361

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015103 "inorganic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005381 "iron ion transmembrane transporter activity" evidence=IGI

GO:0034755 "iron ion transmembrane transport" evidence=IGI

GO:0005384 "manganese ion transmembrane transporter activity" evidence=IMP;IDA;TAS

GO:0015086 "cadmium ion transmembrane transporter activity" evidence=IDA

GO:0070574 "cadmium ion transmembrane transport" evidence=IDA

GO:0071421 "manganese ion transmembrane transport" evidence=IDA

GO:0006828 "manganese ion transport" evidence=RCA;TAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

GO:0015691 "cadmium ion transport" evidence=RCA;TAS

GO:0015692 "lead ion transport" evidence=TAS

GO:0030001 "metal ion transport" evidence=TAS

GO:0046873 "metal ion transmembrane transporter activity" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0055071 "manganese ion homeostasis" evidence=IMP

GO:0000041 "transition metal ion transport" evidence=RCA

UNIPROTKB|Q6ZG85 NRAT1 "Metal transporter NRAT1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 110/183 (60%), Positives = 143/183 (78%)

Query:     8 RKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMP 67
             RKLE +I   +F MAACFFGE+SY++P A +V+KGMFVP L G+GA  +AIAL GA++ P
Sbjct:   184 RKLEFIIAAFMFTMAACFFGELSYLRPSAGEVVKGMFVPSLQGKGAAANAIALFGAIITP 243

Query:    68 HNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANL 127
             +NLFLHSALVLSRK P S + I  ACR+FLIE  LA +VAFLINV+V+ V+G++C+A NL
Sbjct:   244 YNLFLHSALVLSRKTPRSDKSIRAACRYFLIECSLAFIVAFLINVSVVVVAGSICNANNL 303

Query:   128 SYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQMILS 187
             S  + + C D+TL S   LL+NVLG+SS +VYA+ALLASGQS+TI+ T+AGQ IMQ  L 
Sbjct:   304 SPADANTCGDLTLQSTPLLLRNVLGRSSSVVYAVALLASGQSTTISCTFAGQVIMQGFLD 363

Query:   188 FEL 190
              ++
Sbjct:   364 MKM 366

GO:0005886 "plasma membrane" evidence=IDA

GO:0010044 "response to aluminum ion" evidence=IMP

GO:0015083 "aluminum ion transmembrane transporter activity" evidence=IDA

GO:0015690 "aluminum cation transport" evidence=IMP

GO:0005381 "iron ion transmembrane transporter activity" evidence=IDA

GO:0005384 "manganese ion transmembrane transporter activity" evidence=IDA

GO:0015086 "cadmium ion transmembrane transporter activity" evidence=IDA

WB|WBGene00004876 smf-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 232 (86.7 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
 Identities = 49/114 (42%), Positives = 75/114 (65%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSG--QGATGDAIALLGAL 64
             +RKLE++   L+  M   F  E   VKPP  +V+ GM VP  +G  +G    AI+++GA+
Sbjct:   190 IRKLELIFGFLILTMTVSFGYEFVVVKPPIGEVISGMVVPWCAGCGKGEFMQAISVVGAV 249

Query:    65 VMPHNLFLHSALVLSRKVPNSVRG-INDACRFFLIESGLALLVAFLINVAVISV 117
             +MPHNL+LHSALV SR+V    R  + +A ++F +ES +AL ++F IN+ V++V
Sbjct:   250 IMPHNLYLHSALVKSRRVDRKDRRRVAEANKYFTLESAIALFLSFFINLFVVAV 303

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0010042 "response to manganese ion" evidence=IMP

GO:0010038 "response to metal ion" evidence=IGI

GO:0055071 "manganese ion homeostasis" evidence=IMP

GO:0055072 "iron ion homeostasis" evidence=IMP

GO:0046915 "transition metal ion transmembrane transporter activity" evidence=ISS

GO:0000041 "transition metal ion transport" evidence=ISS

TAIR|locus:2124172 NRAMP5 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
 Identities = 79/194 (40%), Positives = 111/194 (57%)

Query:     1 MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIAL 60
             +E  G +RKLE L  VL+  MA  F    +  KP   ++  G+ +PKL G     +A+ +
Sbjct:   199 LEKCG-MRKLEGLFAVLIATMALSFAWMFNETKPSVEELFIGIIIPKL-GSKTIREAVGV 256

Query:    61 LGALVMPHNLFLHSALVLSRKV-PNSVRGINDACRFFLIESGLALLVAFLINVAVISVSG 119
             +G ++ PHN+FLHSALV SRK  P  +  + +A  ++ IES  AL V+F+IN+ V +V  
Sbjct:   257 VGCVITPHNVFLHSALVQSRKTDPKEINRVQEALNYYTIESSAALFVSFMINLFVTAVF- 315

Query:   120 TVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSS-KIVY--AIALLASGQSSTITGTY 176
                  A   Y  K Q   I L +A + LQ   G     I+Y   I LLA+GQSSTITGTY
Sbjct:   316 -----AKGFYGTK-QADSIGLVNAGYYLQEKYGGGVFPILYIWGIGLLAAGQSSTITGTY 369

Query:   177 AGQYIMQMILSFEL 190
             AGQ+IM+  L  ++
Sbjct:   370 AGQFIMEGFLDLQM 383

GO:0005215 "transporter activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015103 "inorganic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=ISS;NAS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS;NAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

GO:0006828 "manganese ion transport" evidence=RCA

GO:0015691 "cadmium ion transport" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2158242 NRAMP4 "natural resistance associated macrophage protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
 Identities = 78/194 (40%), Positives = 111/194 (57%)

Query:     1 MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIAL 60
             +E  G +RKLE +  +L+  MA  F       KP   ++L G  VPKLS +     A+ +
Sbjct:   181 LENYG-IRKLEAVFAILIATMALAFAWMFGQTKPSGTELLVGALVPKLSSR-TIKQAVGI 238

Query:    61 LGALVMPHNLFLHSALVLSRKV-PNSVRGINDACRFFLIESGLALLVAFLINVAVISVSG 119
             +G ++MPHN+FLHSALV SR+V P     + +A +++ IES  AL V+F+INV V +V  
Sbjct:   239 VGCIIMPHNVFLHSALVQSREVDPKKRFRVKEALKYYSIESTGALAVSFIINVFVTTVFA 298

Query:   120 TVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSS-KIVY--AIALLASGQSSTITGTY 176
                     S+        I L +A   LQ+  G     I+Y  AI +LA+GQSSTITGTY
Sbjct:   299 K-------SFYGTEIADTIGLANAGQYLQDKYGGGFFPILYIWAIGVLAAGQSSTITGTY 351

Query:   177 AGQYIMQMILSFEL 190
             AGQ+IM   L+ ++
Sbjct:   352 AGQFIMGGFLNLKM 365

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015103 "inorganic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005384 "manganese ion transmembrane transporter activity" evidence=TAS

GO:0006828 "manganese ion transport" evidence=RCA;IMP;TAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

GO:0015691 "cadmium ion transport" evidence=RCA;TAS

GO:0015692 "lead ion transport" evidence=TAS

GO:0030001 "metal ion transport" evidence=TAS

GO:0046873 "metal ion transmembrane transporter activity" evidence=TAS

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006879 "cellular iron ion homeostasis" evidence=IGI

GO:0009624 "response to nematode" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:2000379 "positive regulation of reactive oxygen species metabolic process" evidence=IGI

GO:0055072 "iron ion homeostasis" evidence=IMP

TAIR|locus:2036751 NRAMP2 "NRAMP metal ion transporter 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
 Identities = 74/194 (38%), Positives = 112/194 (57%)

Query:     1 MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIAL 60
             +E  G VRKLE +  VL+  M   F       KP   +++ G+ +P+LS +     A+ +
Sbjct:   197 LENYG-VRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGILLPRLSSK-TIRQAVGV 254

Query:    61 LGALVMPHNLFLHSALVLSRKV-PNSVRGINDACRFFLIESGLALLVAFLINVAVISVSG 119
             +G ++MPHN+FLHSALV SRK+ P     + +A  ++LIES +AL ++F+IN+ V +V  
Sbjct:   255 VGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALNYYLIESSVALFISFMINLFVTTVFA 314

Query:   120 TVCSAANLSYDNKHQCSDITL-NSASFLLQNVLGKSSKIVY--AIALLASGQSSTITGTY 176
                      +    + ++I L N+  +L +   G    I+Y   I LLA+GQSSTITGTY
Sbjct:   315 K-------GFYGTEKANNIGLVNAGQYLQEKFGGGLLPILYIWGIGLLAAGQSSTITGTY 367

Query:   177 AGQYIMQMILSFEL 190
             AGQ+IM   L+  L
Sbjct:   368 AGQFIMGGFLNLRL 381

GO:0005215 "transporter activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015103 "inorganic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=ISS;NAS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS;NAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

UNIPROTKB|C0H5Y3 SLC11A1 "Solute carrier family 11 (Proton-coupled divalent metal ion transporters), member 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 219 (82.2 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
 Identities = 48/116 (41%), Positives = 75/116 (64%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATG--DAIALLGAL 64
             +RKLE    +L+ IMA  F  E    +P    +L+G+F+P   G G      A+ ++GA+
Sbjct:    74 LRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPELLQAVGIVGAI 133

Query:    65 VMPHNLFLHSALVLSRKVPNSVRG-INDACRFFLIESGLALLVAFLINVAVISVSG 119
             +MPHN++LHSALV SR++  + R  I +A  +FLIE+ +AL V+F+IN+ V++V G
Sbjct:   134 IMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFG 189

GO:0005215 "transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|P49279 SLC11A1 "Natural resistance-associated macrophage protein 1" [Homo sapiens (taxid:9606)]

 Score = 219 (82.2 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
 Identities = 48/116 (41%), Positives = 75/116 (64%)

Query:     7 VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATG--DAIALLGAL 64
             +RKLE    +L+ IMA  F  E    +P    +L+G+F+P   G G      A+ ++GA+
Sbjct:   192 LRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPELLQAVGIVGAI 251

Query:    65 VMPHNLFLHSALVLSRKVPNSVRG-INDACRFFLIESGLALLVAFLINVAVISVSG 119
             +MPHN++LHSALV SR++  + R  I +A  +FLIE+ +AL V+F+IN+ V++V G
Sbjct:   252 IMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFG 307

GO:0000060 "protein import into nucleus, translocation" evidence=IEA

GO:0009279 "cell outer membrane" evidence=IEA

GO:0009617 "response to bacterium" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0031902 "late endosome membrane" evidence=TAS

GO:0051701 "interaction with host" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0090382 "phagosome maturation" evidence=TAS

GO:0070821 "tertiary granule membrane" evidence=IDA

GO:0006879 "cellular iron ion homeostasis" evidence=IMP

GO:0006826 "iron ion transport" evidence=IMP

GO:0030670 "phagocytic vesicle membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IMP

GO:0046915 "transition metal ion transmembrane transporter activity" evidence=IGI

GO:0051139 "metal ion:hydrogen antiporter activity" evidence=IGI

GO:0070574 "cadmium ion transmembrane transport" evidence=IGI

GO:0006876 "cellular cadmium ion homeostasis" evidence=IGI

GO:0002309 "T cell proliferation involved in immune response" evidence=ISS

GO:0002827 "positive regulation of T-helper 1 type immune response" evidence=ISS

GO:0007035 "vacuolar acidification" evidence=ISS

GO:0015707 "nitrite transport" evidence=ISS

GO:0032623 "interleukin-2 production" evidence=ISS

GO:0034341 "response to interferon-gamma" evidence=ISS

GO:0042742 "defense response to bacterium" evidence=ISS

GO:0045342 "MHC class II biosynthetic process" evidence=ISS

GO:0048002 "antigen processing and presentation of peptide antigen" evidence=ISS

GO:0050829 "defense response to Gram-negative bacterium" evidence=ISS

GO:0005384 "manganese ion transmembrane transporter activity" evidence=ISS

GO:0001819 "positive regulation of cytokine production" evidence=ISS

GO:0002606 "positive regulation of dendritic cell antigen processing and presentation" evidence=ISS

GO:0070839 "divalent metal ion export" evidence=ISS

GO:0006828 "manganese ion transport" evidence=ISS

GO:0006954 "inflammatory response" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0032496 "response to lipopolysaccharide" evidence=ISS

GO:0032729 "positive regulation of interferon-gamma production" evidence=ISS

GO:0042116 "macrophage activation" evidence=ISS

GO:0043091 "L-arginine import" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0050766 "positive regulation of phagocytosis" evidence=ISS

GO:0060586 "multicellular organismal iron ion homeostasis" evidence=ISS

GO:0005770 "late endosome" evidence=ISS

GO:0001818 "negative regulation of cytokine production" evidence=ISS

GO:0002369 "T cell cytokine production" evidence=ISS

GO:0006909 "phagocytosis" evidence=ISS

GO:0032147 "activation of protein kinase activity" evidence=ISS

GO:0032632 "interleukin-3 production" evidence=ISS

GO:0042060 "wound healing" evidence=ISS

GO:0042832 "defense response to protozoan" evidence=ISS

GO:0045730 "respiratory burst" evidence=ISS

GO:0048255 "mRNA stabilization" evidence=ISS

GO:0055072 "iron ion homeostasis" evidence=ISS

GO:0005764 "lysosome" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_V000999 nramp transporter (518 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	329
PRK00701	439	PRK00701, PRK00701, manganese transport protein Mn	2e-53
pfam01566	364	pfam01566, Nramp, Natural resistance-associated ma	2e-46
TIGR01197	390	TIGR01197, nramp, NRAMP (natural resistance-associ	5e-38
COG1914	416	COG1914, MntH, Mn2+ and Fe2+ transporters of the N	4e-34

>gnl|CDD|234815 PRK00701, PRK00701, manganese transport protein MntH; Reviewed

 Score =  180 bits (460), Expect = 2e-53
 Identities = 99/285 (34%), Positives = 140/285 (49%), Gaps = 59/285 (20%)

Query: 1   MEGIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPK---LSGQGATGDA 57
           ++  G  R LE +I  L+ ++AA F  E+   +P  A VLKG F+P    L    A   A
Sbjct: 160 LQRRGF-RPLEAIIGGLLLVIAAAFIVELFLAQPDWAAVLKG-FIPSSEILPNPEALYLA 217

Query: 58  IALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISV 117
             +LGA VMPHNL+LHS+LV +R V  +     +A RF  I+S +AL +A  +N A++ +
Sbjct: 218 AGILGATVMPHNLYLHSSLVQTRVVGRTGEEKREALRFTRIDSAIALTIAGFVNAAMLIL 277

Query: 118 SGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYA 177
           +     AA          +DI    A  LL  +LG ++  ++ IALLASG SST+ GT A
Sbjct: 278 A-----AAAFHASGHTDVADIE--DAYLLLSPLLGAAAATLFGIALLASGLSSTVVGTLA 330

Query: 178 GQYIM--------------------------------------------QMILSFELPFA 193
           GQ +M                                            Q++LSF LPFA
Sbjct: 331 GQIVMEGFLRLRIPLWVRRLITRGLAMVPALIVILLGGELDPTRLLVLSQVVLSFGLPFA 390

Query: 194 LIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYL 238
           LIPLL F+S    MG   N    R + +I+WI+ + I+ +NIY L
Sbjct: 391 LIPLLLFTSDRKLMGELVNP---RWVKIIAWIIAVLIVALNIYLL 432

Length = 439

>gnl|CDD|216575 pfam01566, Nramp, Natural resistance-associated macrophage protein

 Score =  160 bits (407), Expect = 2e-46
 Identities = 88/257 (34%), Positives = 123/257 (47%), Gaps = 58/257 (22%)

Query: 8   RKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMP 67
           R+LE +I  LV ++A  F  E+  VKP   +V  G+ VP L G G+   AIA+LGA VMP
Sbjct: 114 RRLERVIIALVAVIALSFIAELFLVKPDWGEVAAGLVVPSLPGSGSLLLAIAILGATVMP 173

Query: 68  HNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANL 127
           HNLFLHS+LV  R           A R+  I++ +AL++A LIN A++ V+  V   A  
Sbjct: 174 HNLFLHSSLVQERGWTIDDDAARRALRYARIDTIIALVLAGLINAAILIVAAAVLHGAGG 233

Query: 128 SYDNKHQCSDITLNSASFLLQNVLG-KSSKIVYAIALLASGQSSTITGTYAGQYIMQMIL 186
           +          T   A+  L+ +LG K++ +++A+ LLA+G SSTITGT AG Y+M+  L
Sbjct: 234 T-------DVTTAADAAAALEPLLGPKAASVLFALGLLAAGLSSTITGTLAGAYVMEGFL 286

Query: 187 SFELP--------------------------------------------------FALIP 196
            + +P                                                  FALIP
Sbjct: 287 GWRIPLWLRRLITRAKAFYPALAVILLGGALLALLGGSPVQLLVLSQVLLSLLLPFALIP 346

Query: 197 LLKFSSSATKMGPHKNS 213
           LL  +SS   MG   NS
Sbjct: 347 LLLLTSSRKLMGEFVNS 363

The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations. Length = 364

>gnl|CDD|162246 TIGR01197, nramp, NRAMP (natural resistance-associated macrophage protein) metal ion transporters

 Score =  139 bits (351), Expect = 5e-38
 Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 55/256 (21%)

Query: 7   VRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATG--DAIALLGAL 64
           +R LE  + +LV I+A CF  E+ Y KP    VL G FVP  +  G  G   A+ +LGA 
Sbjct: 135 LRILEAFVALLVTIVAICFAYELFYAKPGQVKVLFGGFVPSCAVFGTDGLLQAVGILGAT 194

Query: 65  VMPHNLFLHSALVLSRKVPNSVR-GINDACRFFLIESGLALLVAFLINVAVISV------ 117
           VMPH+L+LHSALV SR V   V+ G+++A  +  IE+ +AL V+F IN  VI++      
Sbjct: 195 VMPHSLYLHSALVQSRLVDRDVKEGVSEANMYRPIEAAIALSVSFSINEFVIALFTAALF 254

Query: 118 --SGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGT 175
             +  +  A    +++ +      L S   LL  +   ++  ++A+ LLA+GQSS + GT
Sbjct: 255 VNTNILVVAGATLFNSNNNADAADLFSIGVLLGCLFSPAAGYIFAVGLLAAGQSSGMVGT 314

Query: 176 YAGQYIM--------------------------------------------QMILSFELP 191
           Y+GQ++M                                            Q++LS  LP
Sbjct: 315 YSGQFVMEGFLNWRWSPWLRRLITRAIAIIPCLLVAAFGGREGLTGALNASQVVLSLLLP 374

Query: 192 FALIPLLKFSSSATKM 207
           FALIPL+ F+SS   M
Sbjct: 375 FALIPLIMFTSSKKIM 390

This model describes the Nramp metal ion transporter family. Historically, in mammals these proteins have been functionally characterized as proteins involved in the host pathogen resistance, hence the name - NRAMP. At least two isoforms Nramp1 and Nramp2 have been identified. However the exact mechanism of pathogen resistance was unclear, until it was demonstrated by expression cloning and electrophysiological techniques that this protein was a metal ion transporter. It was also independently demonstrated that a microcytic anemia (mk) locus in mouse, encodes a metal ion transporter (DCT1 or Nramp2). The transporter has a broad range of substrate specificity that include Fe+2, Zn+2, Mn+2, Co+2, Cd+2, Cu+2, Ni+2 and Pb+2. The uptake of these metal ions is coupled to proton symport. Metal ions are essential cofactors in a number of biological process including, oxidative phosphorylation, gene regulation and metal ion homeostasis. Nramp1 could confer resistance to infection in one of the two ways. (1) The uptake of Fe+2 can produce toxic hydroxyl radicals via Fenton reaction killing the pathogens in phagosomes or (2) Deplete the metal ion pools in the phagosome and deprive the pathogens of metal ions, which is critical for its survival [Transport and binding proteins, Cations and iron carrying compounds]. Length = 390

>gnl|CDD|224826 COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]

 Score =  128 bits (325), Expect = 4e-34
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 53/281 (18%)

Query: 8   RKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMP 67
           R LE ++ +L  ++   F        PP  +V KG F+P      A    IA+LGA VMP
Sbjct: 147 RLLERVVLILGLVLVILFVYVAFVAPPPWGEVAKGDFLPSSPWTEALLLIIAILGATVMP 206

Query: 68  HNLFLHSALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANL 127
           H L+LHS+LV              A R+  I++ + +++A L+N+A++     + +AA  
Sbjct: 207 HILYLHSSLVQDAG--IKGEENLRALRYSRIDTIIGMIIALLVNLAIL-----IVAAAGF 259

Query: 128 SYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIM----- 182
            +++           A  LL  +LG ++ +++ +ALLA+G SST+  TYAGQ +M     
Sbjct: 260 -HNSGPNQDVADAYDAYLLLAPLLGSAAFVLFGVALLAAGLSSTVVATYAGQIVMEGFLN 318

Query: 183 -------------------------------------QMILSFELPFALIPLLKFSSSAT 205
                                                Q++LS  LPFALIPLL  +S   
Sbjct: 319 WRIPLWRRRLITRTFAIVPGLAIIILFGDPARLLVFSQVLLSVILPFALIPLLLLTSDKK 378

Query: 206 KMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWL 246
            MG +KN    R + V+ WI+ + I+ +NI  L       L
Sbjct: 379 LMGDYKNP---RWLTVLGWIVVILIVALNIILLVGTLGGLL 416

Length = 416

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
KOG1291	503	consensus Mn2+ and Fe2+ transporters of the NRAMP	100.0
PRK00701	439	manganese transport protein MntH; Reviewed	100.0
TIGR01197	390	nramp NRAMP (natural resistance-associated macroph	100.0
PF01566	358	Nramp: Natural resistance-associated macrophage pr	100.0
COG1914	416	MntH Mn2+ and Fe2+ transporters of the NRAMP famil	100.0
COG0733	439	Na+-dependent transporters of the SNF family [Gene	94.22
TIGR00366	438	conserved hypothetical integral membrane protein.	80.16

>KOG1291 consensus Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6.3e-59  Score=457.40  Aligned_cols=274  Identities=41%  Similarity=0.624  Sum_probs=243.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHhhhcccccccccC--CChHHHHHHHhchhhhhHHHHHhhhhhhccCCC
Q 020216            6 QVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSG--QGATGDAIALLGALVMPHNLFLHSALVLSRKVP   83 (329)
Q Consensus         6 ~yRklE~~~~~Lv~vm~l~F~~~~~~~~Pd~~~v~~Gl~vP~l~~--~~~~~~avaiiGatImPhnlflhSalV~~R~~~   83 (329)
                      +.||+|.++++|+..|++||.+|+..+||+.+|++.|+|+|++++  ++.+++++|++||+|||||+||||++||+|+.|
T Consensus       159 GiRklE~~~~~Li~~mai~F~~el~~~kp~~~~~l~g~fvP~~~~~~~~~~~~avgilGA~IMPHnlyLhSaLV~sR~~d  238 (503)
T KOG1291|consen  159 GIRKLEAFFAFLIVTMAISFGVELGVSKPSGGELLFGGFVPSLSGCGSEGLYQAVGILGAVIMPHNLYLHSALVQSRLID  238 (503)
T ss_pred             chHHHHHHHHHHHHHHHHHHheeEEEecCCchheeeeeecccccCCCCcHHHHHHHHhceeeccchhhhhhhhhcccccC
Confidence            689999999999999999999999999999999999999999996  467899999999999999999999999999999


Q ss_pred             CCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccCCC-CC-----CCCcccccccHHHHHHHHHHhhhhHH
Q 020216           84 NSV-RGINDACRFFLIESGLALLVAFLINVAVISVS-GTVCSAANL-SY-----DNKHQCSDITLNSASFLLQNVLGKSS  155 (329)
Q Consensus        84 ~~~-~~~~~a~~~~~iDs~ial~vs~lIn~aI~iva-A~vl~~~g~-~~-----~~~~~~~~~~l~~a~~~L~~~~G~~a  155 (329)
                      |.. ++++|+++|+.+|+.++++++|.||.+++.++ |+.+++... .+     ++.++..+.|+.+++.+|++.+|+++
T Consensus       239 ~~~~~~v~ea~~y~~ies~ial~vsF~in~~VisvF~a~~f~~~t~~~v~g~~~~~s~~a~~~Dl~~~~~~L~~~~g~~a  318 (503)
T KOG1291|consen  239 RDVKKGVYEANNYFPIESAIALFVSFSINLFVISVFTAAGFYNKTILDVAGACLYNSNEADDADLFSAGLLLQCYFGPAA  318 (503)
T ss_pred             HhhhhhhHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhhhhhhhcCCCcchhhhhHHHHHHHHHHhccHH
Confidence            864 57899999999999999999999999999999 776655432 11     12234456799999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhcchhhHHHHH--------------------------------------------HHhhhhhH
Q 020216          156 KIVYAIALLASGQSSTITGTYAGQYIMQ--------------------------------------------MILSFELP  191 (329)
Q Consensus       156 ~~iFaiGLlaAG~sStitgt~agq~vme--------------------------------------------Vi~sl~LP  191 (329)
                      .++|++||++||||||+|||||||++||                                            |+||++||
T Consensus       319 ~~Ifai~lLasGQSstitgTyaGQ~VmeGFLn~~l~~W~r~liTR~iAIiPtL~va~~~g~~~l~~l~~~~nvl~S~~LP  398 (503)
T KOG1291|consen  319 LYIFAIGLLASGQSSTITGTYAGQFVMEGFLNLKLPPWLRRLITRSIAIIPTLIVALTSGEDGLSGLNDFLNVLQSLQLP  398 (503)
T ss_pred             HHHHHHHHHHCCCcccceeeeeeeEeecccccccchHHHHHHHHHHHHHHhhhheeeeeCcccHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999                                            99999999


Q ss_pred             HHHHHHHHHhcCCCcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhhHHHHHHHHHHHHH
Q 020216          192 FALIPLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVDWLIHNSLPKVGNVFIGIIVFPLMAVYM  271 (329)
Q Consensus       192 falipLl~~ts~k~iMG~~~n~~~~~~~~il~~i~~~lii~ln~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  271 (329)
                      |+++|+++|+|+|++||+|+|+..   .+..+|.+..+++.+|.|++++ +.....+.+      ..+...+....+.|+
T Consensus       399 Fa~iPLl~ftS~r~IM~~~~~~~~---~~~~~~~~~~~~~~in~y~~v~-~~~~~~~~~------~~~~~~~~~~~~~y~  468 (503)
T KOG1291|consen  399 FAVIPLLTFTSSRKIMGVFKNGLV---TEELTWTVAALVLGINGYFLVS-FFWSLVGKH------SKIVVTVNVWTLAYL  468 (503)
T ss_pred             HHHhhHHhhhccHHHhhhhccCcc---ceeeeehheeeeeeeeeEEeee-ehhhhcCCc------eeeehhHHHHHHHHH
Confidence            999999999999999999999999   9999999999999999999984 333333322      124455677788999


Q ss_pred             HHHHHHHhcccccccccC
Q 020216          272 IAVIYLTFRKDTVVTFID  289 (329)
Q Consensus       272 ~~~~yl~~~~~~~~~~~~  289 (329)
                      ++++||+.++.+..+...
T Consensus       469 ~~i~yL~~~~l~~~~~~~  486 (503)
T KOG1291|consen  469 AFILYLAATCLNAYSIIS  486 (503)
T ss_pred             HHHHHHHHHHHHHHhhhh
Confidence            999999999988777654

>PRK00701 manganese transport protein MntH; Reviewed

Probab=100.00  E-value=3e-48  Score=388.78  Aligned_cols=230  Identities=41%  Similarity=0.623  Sum_probs=214.1

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHhhhccccccc---ccCCChHHHHHHHhchhhhhHHHHHhhhhhhc
Q 020216            3 GIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPK---LSGQGATGDAIALLGALVMPHNLFLHSALVLS   79 (329)
Q Consensus         3 ~~g~yRklE~~~~~Lv~vm~l~F~~~~~~~~Pd~~~v~~Gl~vP~---l~~~~~~~~avaiiGatImPhnlflhSalV~~   79 (329)
                      .+++||++|+++..++++|.+||+++++.++|||+|+++| ++|+   +|+++.++.++|++||||||||+|+||+++++
T Consensus       161 ~~~~y~~~E~i~~~lv~~m~l~f~~~~~~~~P~~~~v~~G-l~P~~~~~p~~~~~~~~iaiiGttv~P~~~f~~ss~v~~  239 (439)
T PRK00701        161 QRRGFRPLEAIIGGLLLVIAAAFIVELFLAQPDWAAVLKG-FIPSSEILPNPEALYLAAGILGATVMPHNLYLHSSLVQT  239 (439)
T ss_pred             HhcCccHHHHHHHHHHHHHHHHHHHHHheeCCCHHHHhcc-cCCCCcCCCCccHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            3688999999999999999999999999999999999999 7999   88667789999999999999999999999998


Q ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccccccHHHHHHHHHHhhhhHHHHHH
Q 020216           80 RKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVY  159 (329)
Q Consensus        80 R~~~~~~~~~~~a~~~~~iDs~ial~vs~lIn~aI~ivaA~vl~~~g~~~~~~~~~~~~~l~~a~~~L~~~~G~~a~~iF  159 (329)
                      |++++.++..++++|+.|+|+.+++.+++++|.++++++|+++|++|.+.       ..+.+|+++.|+|.+|++++++|
T Consensus       240 k~~~~~~~~~~~~l~~~r~Dt~~g~~i~~li~~ai~v~~A~~l~~~g~~~-------~~~~~~~a~~L~p~~G~~a~~lF  312 (439)
T PRK00701        240 RVVGRTGEEKREALRFTRIDSAIALTIAGFVNAAMLILAAAAFHASGHTD-------VADIEDAYLLLSPLLGAAAATLF  312 (439)
T ss_pred             ccccCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-------cCCHHHHHHHHHHHHhHHHHHHH
Confidence            86555555678889999999999999999999999999999999887531       24789999999999999999999


Q ss_pred             HHHHHHhhhhhhhhcchhhHHHHH--------------------------------------------HHhhhhhHHHHH
Q 020216          160 AIALLASGQSSTITGTYAGQYIMQ--------------------------------------------MILSFELPFALI  195 (329)
Q Consensus       160 aiGLlaAG~sStitgt~agq~vme--------------------------------------------Vi~sl~LPfali  195 (329)
                      ++|+++|||+|+++++++||+++|                                            ++++++||++++
T Consensus       313 aiGL~aag~sS~i~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~ii~a~~~~~~~~~~~p~~lli~aqv~~~i~LP~~~~  392 (439)
T PRK00701        313 GIALLASGLSSTVVGTLAGQIVMEGFLRLRIPLWVRRLITRGLAMVPALIVILLGGELDPTRLLVLSQVVLSFGLPFALI  392 (439)
T ss_pred             HHHHHHhHhHHHhHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998                                            788999999999


Q ss_pred             HHHHHhcCCCcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020216          196 PLLKFSSSATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFV  243 (329)
Q Consensus       196 pLl~~ts~k~iMG~~~n~~~~~~~~il~~i~~~lii~ln~~~l~~~~~  243 (329)
                      |+++++|||++||+|||+++   .++++|++.++++.+|++++++.+.
T Consensus       393 ~ll~l~~~~~imG~~~~~~~---~~~~~~~~~~~i~~l~~~~~~~~~~  437 (439)
T PRK00701        393 PLLLFTSDRKLMGELVNPRW---VKIIAWIIAVLIVALNIYLLYQTFT  437 (439)
T ss_pred             HHHHHHCCHHhhccchhhHH---HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999   9999999999999999999987653

>TIGR01197 nramp NRAMP (natural resistance-associated macrophage protein) metal ion transporters

Probab=100.00  E-value=1e-42  Score=344.05  Aligned_cols=199  Identities=41%  Similarity=0.629  Sum_probs=174.4

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHhhhcccccccccC--CChHHHHHHHhchhhhhHHHHHhhhhhhcc
Q 020216            3 GIGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSG--QGATGDAIALLGALVMPHNLFLHSALVLSR   80 (329)
Q Consensus         3 ~~g~yRklE~~~~~Lv~vm~l~F~~~~~~~~Pd~~~v~~Gl~vP~l~~--~~~~~~avaiiGatImPhnlflhSalV~~R   80 (329)
                      .+++||++|+++..++++|.+||+++++.++|||+++++|+++|++|.  ++.++.++|++||||||||+|+||++||+|
T Consensus       131 ~~~~yr~~E~~~~~lv~~m~~~f~~~~~~~~P~~~~~~~g~~vP~~p~~~~~~~~~~vaiiGttv~p~~~fl~s~lv~~r  210 (390)
T TIGR01197       131 DKPGLRILEAFVALLVTIVAICFAYELFYAKPGQVKVLFGGFVPSCAVFGTDGLLQAVGILGATVMPHSLYLHSALVQSR  210 (390)
T ss_pred             HhCCceeHHHHHHHHHHHHHHHHHHHHheeCCCHHHHhhcccCCCccCCCCchHHHHHHHHhhhhhHHHHHHHHHhhhcc
Confidence            468899999999999999999999999999999999999988999873  466889999999999999999999999999


Q ss_pred             CCCCCcc-chHHHH-------------HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCCCCCCcccccccHHHHHH
Q 020216           81 KVPNSVR-GINDAC-------------RFFLIESGLALLVAF-LINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASF  145 (329)
Q Consensus        81 ~~~~~~~-~~~~a~-------------~~~~iDs~ial~vs~-lIn~aI~ivaA~vl~~~g~~~~~~~~~~~~~l~~a~~  145 (329)
                      +++++++ ++|+++             ++.+.|+.++++... ++|.++++++|+++|+++-.      +++.|++|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~v~~~ilv~aaa~l~~~~~~------~~~~~~~~~~~  284 (390)
T TIGR01197       211 LVDRDVKEGVSEANMYRPIEAAIALSVSFSINEFVIALFTAALFVNTNILVVAGATLFNSNNN------ADAADLFSIGV  284 (390)
T ss_pred             ccCcccchhhhhhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC------cCcCCHHHHHH
Confidence            9877653 445544             455566666665544 48999999999999864310      12458999999


Q ss_pred             HHHHhhhhHHHHHHHHHHHHhhhhhhhhcchhhHHHHH------------------------------------------
Q 020216          146 LLQNVLGKSSKIVYAIALLASGQSSTITGTYAGQYIMQ------------------------------------------  183 (329)
Q Consensus       146 ~L~~~~G~~a~~iFaiGLlaAG~sStitgt~agq~vme------------------------------------------  183 (329)
                      .|||.+|++++++|++||++|||||++|+|++||++||                                          
T Consensus       285 ~L~p~~G~~a~~lF~igLlaAG~sS~it~~~ag~~v~~gfl~~~~~~~~r~~~~~~~~ii~aliv~~~~g~~~p~~liv~  364 (390)
T TIGR01197       285 LLGCLFSPAAGYIFAVGLLAAGQSSGMVGTYSGQFVMEGFLNWRWSPWLRRLITRAIAIIPCLLVAAFGGREGLTGALNA  364 (390)
T ss_pred             HHHHHhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Confidence            99999999999999999999999999999999999999                                          


Q ss_pred             --HHhhhhhHHHHHHHHHHhcCCCcC
Q 020216          184 --MILSFELPFALIPLLKFSSSATKM  207 (329)
Q Consensus       184 --Vi~sl~LPfalipLl~~ts~k~iM  207 (329)
                        ++++++|||+++|+++++|||++|
T Consensus       365 aQv~~~l~LP~~~i~Ll~~~~~k~lM  390 (390)
T TIGR01197       365 SQVVLSLLLPFALIPLIMFTSSKKIM  390 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccC
Confidence              889999999999999999999998

This model describes the Nramp metal ion transporter family. Historically, in mammals these proteins have been functionally characterized as proteins involved in the host pathogen resistance, hence the name - NRAMP. At least two isoforms Nramp1 and Nramp2 have been identified. However the exact mechanism of pathogen resistance was unclear, until it was demonstrated by expression cloning and electrophysiological techniques that this protein was a metal ion transporter. It was also independently demonstrated that a microcytic anemia (mk) locus in mouse, encodes a metal ion transporter (DCT1 or Nramp2). The transporter has a broad range of substrate specificity that include Fe+2, Zn+2, Mn+2, Co+2, Cd+2, Cu+2, Ni+2 and Pb+2. The uptake of these metal ions is coupled to proton symport. Metal ions are essential cofactors in a number of biological process including, oxidative phosphorylation, gene

>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2

Probab=100.00  E-value=1.1e-41  Score=332.04  Aligned_cols=203  Identities=36%  Similarity=0.558  Sum_probs=187.5

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHhhhcccccccccCCChHHHHHHHhchhhhhHHHHHhhhhhhccCCC
Q 020216            4 IGQVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVP   83 (329)
Q Consensus         4 ~g~yRklE~~~~~Lv~vm~l~F~~~~~~~~Pd~~~v~~Gl~vP~l~~~~~~~~avaiiGatImPhnlflhSalV~~R~~~   83 (329)
                      +|+||++|+++..++.+|.+||+++++.++|||+++.+|++.|++|+.+.+..++|++|+|+||||+|+||+.++||+++
T Consensus       110 ~~~y~~~E~~~~~lv~~m~l~f~~~~~~~~p~~~~~~~g~~~P~~p~~~~~~~~valiGttv~p~~lf~~s~~~~~k~~~  189 (358)
T PF01566_consen  110 SGGYRRLERILKVLVAVMVLAFLIAAFIVHPDWGEVARGLVVPSIPGPGSLLFAVALIGTTVMPHNLFLHSSLVQEKGWT  189 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhccCCCCcchhHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC
Confidence            68899999999999999999999999999999999999987799997567899999999999999999999999999987


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccccccHHHHHHHHHHhhh-hHHHHHHHHH
Q 020216           84 NSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLG-KSSKIVYAIA  162 (329)
Q Consensus        84 ~~~~~~~~a~~~~~iDs~ial~vs~lIn~aI~ivaA~vl~~~g~~~~~~~~~~~~~l~~a~~~L~~~~G-~~a~~iFaiG  162 (329)
                      .+++..++++|+.|+|+.+|+.+++++|.++++++|.++|+++..        ..+.+|+++.|+|.+| ++++++|++|
T Consensus       190 ~~~~~~~~~l~~~~~D~~~g~~~~~li~~ai~i~~A~~l~~~~~~--------~~~~~~~~~~L~~~~G~~~a~~lF~ig  261 (358)
T PF01566_consen  190 GNRSRPDEALKYARFDTIIGMIVSFLINVAILIVAAAVLYPGGSE--------VETAAQAAQALEPLLGSPWARYLFAIG  261 (358)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------hhhHHHHHHHHHHhcCchHHHHhHHHH
Confidence            644322268999999999999999999999999999999855432        3489999999999999 8999999999


Q ss_pred             HHHhhhhhhhhcchhhHHHHH---------------------------------------------HHhhhhhHHHHHHH
Q 020216          163 LLASGQSSTITGTYAGQYIMQ---------------------------------------------MILSFELPFALIPL  197 (329)
Q Consensus       163 LlaAG~sStitgt~agq~vme---------------------------------------------Vi~sl~LPfalipL  197 (329)
                      +++|||||+++.+++++++++                                             +++++.+|++++|+
T Consensus       262 l~~a~fss~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~v~~~~~lP~~~~~l  341 (358)
T PF01566_consen  262 LFAAGFSSSITATLAGAYVLADFLGWRWSLSRRRLITRAIAFIPALIIALLIGAPGAPVQLLIFAQVLNSLLLPFVAIPL  341 (358)
T ss_pred             HHHHHHhhHHHhccccceehHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887                                             78899999999999


Q ss_pred             HHHhcCCCcCCCCCchh
Q 020216          198 LKFSSSATKMGPHKNSI  214 (329)
Q Consensus       198 l~~ts~k~iMG~~~n~~  214 (329)
                      ++++|||++||+|||+|
T Consensus       342 ~~l~n~~~~mG~~~n~~  358 (358)
T PF01566_consen  342 LLLANDKKLMGEYRNSW  358 (358)
T ss_pred             HHHHcChhhhhCcccCC
Confidence            99999999999999986

The NRAMP family is a novel family of functionally related proteins defined by a conserved hydrophobic core of ten transmembrane domains []. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others. It is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals []. The yeast proteins Smf1 and Smf2 may also transport divalent cations []. The natural resistance of mice to infection with intracellular parasites is controlled by the Bcg locus, which modulates the cytostatic/cytocidal activity of phagocytes. Nramp1, the gene responsible, is expressed exclusively in macrophages and poly-morphonuclear leukocytes, and encodes a polypeptide (natural resistance-associated macrophage protein) with features typical of integral membrane proteins. Other transporter proteins from a variety of sources also belong to this family.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane

>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.1e-40  Score=330.97  Aligned_cols=228  Identities=34%  Similarity=0.508  Sum_probs=210.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHhhhcccccccccCCChHHHHHHHhchhhhhHHHHHhhhhhhccCCCCC
Q 020216            6 QVRKLEMLITVLVFIMAACFFGEMSYVKPPAADVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNS   85 (329)
Q Consensus         6 ~yRklE~~~~~Lv~vm~l~F~~~~~~~~Pd~~~v~~Gl~vP~l~~~~~~~~avaiiGatImPhnlflhSalV~~R~~~~~   85 (329)
                      +||++|++...++.++.+||.++++.++|+|+++.+|.|+|+.|+.+.++.++|++|+|||||++|+||+.||++..  +
T Consensus       145 ~~r~~E~~v~~l~~~~~i~~~~~~~~~~p~~~~~~~~~f~P~~~~~~~l~~ii~ilGaTVmP~i~y~~s~~v~~~~~--~  222 (416)
T COG1914         145 GYRLLERVVLILGLVLVILFVYVAFVAPPPWGEVAKGDFLPSSPWTEALLLIIAILGATVMPHILYLHSSLVQDAGI--K  222 (416)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHhccCCCCCCcchhHHHHHHHHhccchhHHHHHhhcceeccccc--c
Confidence            69999999999999999999999999999999999999999988656789999999999999999999999998432  3


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccccccHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 020216           86 VRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKSSKIVYAIALLA  165 (329)
Q Consensus        86 ~~~~~~a~~~~~iDs~ial~vs~lIn~aI~ivaA~vl~~~g~~~~~~~~~~~~~l~~a~~~L~~~~G~~a~~iFaiGLla  165 (329)
                      +++.+++.|+.++|+.+++..+.++|.++++++|..+|.++...      ...+++++++.++|.+|+.+..+|++++++
T Consensus       223 ~~~~~~~~~~~~~d~~i~~~~a~lv~~ail~~aa~~~~~~~~~~------~~~~~~~a~~~l~~~~G~~~~~lF~v~lla  296 (416)
T COG1914         223 GEENLRALRYSRIDTIIGMIIALLVNLAILIVAAAGFHNSGPNQ------DVADAYDAYLLLAPLLGSAAFVLFGVALLA  296 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc------cccchHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence            34567789999999999999999999999999999998776421      135899999999999999999999999999


Q ss_pred             hhhhhhhhcchhhHHHHH------------------------------------------HHhhhhhHHHHHHHHHHhcC
Q 020216          166 SGQSSTITGTYAGQYIMQ------------------------------------------MILSFELPFALIPLLKFSSS  203 (329)
Q Consensus       166 AG~sStitgt~agq~vme------------------------------------------Vi~sl~LPfalipLl~~ts~  203 (329)
                      ||++|+++++|+||++||                                          +++++++||+++|+++++++
T Consensus       297 sg~~s~~~~~~a~~~~~~g~~~~~~~~~~r~~i~~~~~~ip~~~i~i~~g~~~~lL~~sqvl~~~~lP~~~~~ll~~~~~  376 (416)
T COG1914         297 AGLSSTVVATYAGQIVMEGFLNWRIPLWRRRLITRTFAIVPGLAIIILFGDPARLLVFSQVLLSVILPFALIPLLLLTSD  376 (416)
T ss_pred             hHHHHHHHHhhhhHHHHHhhhcccCchHhhHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999998                                          88899999999999999999


Q ss_pred             CCcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020216          204 ATKMGPHKNSIYVRLIIVISWILGLGIIGINIYYLSTGFVD  244 (329)
Q Consensus       204 k~iMG~~~n~~~~~~~~il~~i~~~lii~ln~~~l~~~~~~  244 (329)
                      |++||+|+|++|   .++++|+..+.+..+|++++++.+.+
T Consensus       377 k~~mg~~~~~~~---~~~~~~~v~~~i~~L~i~li~~~~~~  414 (416)
T COG1914         377 KKLMGDYKNPRW---LTVLGWIVVILIVALNIILLVGTLGG  414 (416)
T ss_pred             hhhhhcccchHH---HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999   99999999999999999999876643

>COG0733 Na+-dependent transporters of the SNF family [General function prediction only]

Probab=94.22  E-value=4.5  Score=41.41  Aligned_cols=148  Identities=22%  Similarity=0.253  Sum_probs=86.5

Q ss_pred             hHH-HHHHHHHHHHHHHHHHHHHHhhc--CCCHHhhhcccccccccC---CChHHHHHHH------hchhhhhHHHHHhh
Q 020216            7 VRK-LEMLITVLVFIMAACFFGEMSYV--KPPAADVLKGMFVPKLSG---QGATGDAIAL------LGALVMPHNLFLHS   74 (329)
Q Consensus         7 yRk-lE~~~~~Lv~vm~l~F~~~~~~~--~Pd~~~v~~Gl~vP~l~~---~~~~~~avai------iGatImPhnlflhS   74 (329)
                      .+| +||.-++++=...++|+...+++  .|...|=.+=++.|..+.   .+.+..|.|-      +|-.+|   +=+-|
T Consensus       163 V~~GIEk~~kimMP~Lfvl~i~Lvi~~~tLpGA~~G~~f~l~PD~s~l~~~~v~~~AlGQ~FFsLSlG~g~m---itYsS  239 (439)
T COG0733         163 VKKGIEKANKIMMPLLFVLFIILVIRAVTLPGAMEGLKFLFKPDFSKLTDPKVWLAALGQAFFSLSLGFGIM---ITYSS  239 (439)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHhcCCHHHcCchhhHHHHHHHHHHHHHHHHHHH---HHHHh
Confidence            344 88877777766666776665554  777777777777887542   2333333332      233333   22334


Q ss_pred             hhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccccccHHHHHHHHHHhhhhH
Q 020216           75 ALVLSRKVPNSVRGINDACRFFLIESGLALLVAFLINVAVISVSGTVCSAANLSYDNKHQCSDITLNSASFLLQNVLGKS  154 (329)
Q Consensus        75 alV~~R~~~~~~~~~~~a~~~~~iDs~ial~vs~lIn~aI~ivaA~vl~~~g~~~~~~~~~~~~~l~~a~~~L~~~~G~~  154 (329)
                      ++=|++..      .+.+......|+.+++...+.|--++-..+.+.  +.|..      -.-.++-++-..+.  +|+.
T Consensus       240 YL~k~~~l------~~sa~~v~~~n~~~s~lAGl~Ifpa~f~~g~~~--~~Gpg------L~Fi~LP~if~~mp--~G~~  303 (439)
T COG0733         240 YLSKKSDL------VSSALSIVLLNTLISLLAGLVIFPALFSFGADA--SQGPG------LVFIVLPAVFNQMP--LGTL  303 (439)
T ss_pred             hcCcccch------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCCCe------eehhHHHHHHHhCc--hhHH
Confidence            44333222      345677888999998877765544444333331  11110      01123444444444  7888


Q ss_pred             HHHHHHHHHHHhhhhhhhh
Q 020216          155 SKIVYAIALLASGQSSTIT  173 (329)
Q Consensus       155 a~~iFaiGLlaAG~sStit  173 (329)
                      -..+|-+.++.||.+|++.
T Consensus       304 ~~~lFFl~l~fAalTS~iS  322 (439)
T COG0733         304 FGILFFLLLLFAALTSAIS  322 (439)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999884

>TIGR00366 conserved hypothetical integral membrane protein

Probab=80.16  E-value=30  Score=35.53  Aligned_cols=45  Identities=20%  Similarity=0.360  Sum_probs=32.5

Q ss_pred             HHhhhhhhhhcchhhHHHHH--------------------------HHhhhhhHHHHHHHHHHhcC--CCcCC
Q 020216          164 LASGQSSTITGTYAGQYIMQ--------------------------MILSFELPFALIPLLKFSSS--ATKMG  208 (329)
Q Consensus       164 laAG~sStitgt~agq~vme--------------------------Vi~sl~LPfalipLl~~ts~--k~iMG  208 (329)
                      +.+++......+-+|||+.+                          ...-+.-||=.+|++-.+.=  |++||
T Consensus       358 l~~~liNfFIPSGsGqwai~aPImvP~a~~LGvs~~~tv~Ay~~GD~~tNlI~PfWaLP~L~i~gL~arDImG  430 (438)
T TIGR00366       358 FSAGLINIFIPSGGGHWAIQGPIVIPAAQALGVDLGKSVMAIAYGDAWTNMAQPFWALPALGIAGLGARDIMG  430 (438)
T ss_pred             HHHHHHHhcccCchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHhHHHhhHHHHHHHHHHcCCcHHHHhh
Confidence            67777788888889999887                          12234559999999888753  45554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00