Citrus Sinensis ID: 020294

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MMATTHVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHccccHHHHHHHHHccccccEEEEEEEcccccccEEEEEEcccEEEEEEcccccccHHHHHHHHHHHHHHcccccccccEEEcccccccEEEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccEEEcccccccEEEcccccEEEEccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEcEEcccccccccccccccccccEEEHHcccHHHHHHHHHHccccEEEEcccccccccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccEEcccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccEEccccccccccccccccEEEEccccccccHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mmatthvgflsfgsflplpsrisfskRRTFAMAALSDDPIREWILSegkathitkicpvgggcinlasrygtdagsffvktnrsigpsmfegealglgamyetrtiraprpfkvgalptggsYIIMEFIefgssrgnqsVFGKKLAEMHKagksskgfgfdvdntigstpqinkwTSNWIEFYAEHRLGYQLKLALdqygdstiyqRGHRLMKNlaplfegvnvepcllhgdlwsgnissdkngepvildpacyyghneaefgmswcagfggsfynsyfevmpkqpgfekrrDLYMLYHYLNHYnlfgsgyrssaLSIIDDYLRMLKV
Flexible Loop (DISEMBL)
mmatthvgflsfgsflplpSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Low Complexity Region (SEG)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDlymlyhylnhynlFGSGYRSSALSIIDDYLRMLKV
Disordered region (IsUnstruct)
*****HVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS**********************GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM***
Disordered Region (DISOPRED)
***************************************IREWILSEGK********PVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Disordered Region (DISEMBL)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Disordered Region (DISPRO)
*MATTHVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	328	2.2.26 [Sep-21-2011]
Q9LEW8	326	Protein-ribulosamine 3-ki	yes	no	0.932	0.938	0.820	1e-151
A2XBT1	342	Protein-ribulosamine 3-ki	N/A	no	0.917	0.880	0.777	1e-142
Q10SM2	342	Protein-ribulosamine 3-ki	yes	no	0.917	0.880	0.777	1e-142
Q8K274	309	Ketosamine-3-kinase OS=Mu	yes	no	0.789	0.838	0.410	1e-57
Q9HA64	309	Ketosamine-3-kinase OS=Ho	yes	no	0.804	0.854	0.4	2e-56
P74594	295	Uncharacterized protein s	N/A	no	0.820	0.911	0.434	5e-56
Q9ER35	309	Fructosamine-3-kinase OS=	no	no	0.804	0.854	0.4	3e-54
Q9H479	309	Fructosamine-3-kinase OS=	no	no	0.804	0.854	0.393	4e-53
Q9KRU5	288	Uncharacterized protein V	yes	no	0.820	0.934	0.361	1e-40
Q87PM1	288	Uncharacterized protein V	yes	no	0.774	0.881	0.370	2e-40

>sp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=At3g61080 PE=1 SV=2

 Score =  534 bits (1375), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/307 (82%), Positives = 276/307 (89%), Gaps = 1/307 (0%)

Query: 23  SFSKRRTF-AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 81
           +FS R  F AMAA+S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 82  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 141
           NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query: 142 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query: 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 261
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct: 200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query: 262 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 321
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query: 322 YLRMLKV 328
           YLRMLK 
Sbjct: 320 YLRMLKA 326

Initiates a process leading to the deglycation of proteins. Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 7EC: 2

>sp|A2XBT1|FN3KR_ORYSI Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_09747 PE=3 SV=1

 Score =  504 bits (1299), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 234/301 (77%), Positives = 264/301 (87%)

Query: 28  RTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP 87
           R   MAAL +DPIR+WIL+EGKAT IT +  +GGGCIN A  Y TDAGSFFVKTN  IGP
Sbjct: 42  RLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDAGSFFVKTNGRIGP 101

Query: 88  SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAE 147
           SMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS  G+KLAE
Sbjct: 102 SMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAE 161

Query: 148 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207
           MHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L   ++GDS IY +
Sbjct: 162 MHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDK 221

Query: 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 267
           G RL++N+ PLFEG  +EPCLLHGDLWSGNISSD +GEPVILDPACYYGHNEAEFGMSWC
Sbjct: 222 GQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTDGEPVILDPACYYGHNEAEFGMSWC 281

Query: 268 AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 327
           AGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 282 AGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLK 341

Query: 328 V 328
            
Sbjct: 342 A 342

Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 2

>sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1

 Score =  504 bits (1298), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 234/301 (77%), Positives = 263/301 (87%)

Query: 28  RTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP 87
           R   MAAL +DPIR+WIL+EGKAT IT +  +GGGCIN A  Y TDA SFFVKTN  IGP
Sbjct: 42  RLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDASSFFVKTNGRIGP 101

Query: 88  SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAE 147
           SMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS  G+KLAE
Sbjct: 102 SMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAE 161

Query: 148 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207
           MHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L   ++GDS IY +
Sbjct: 162 MHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDK 221

Query: 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 267
           G RL++N+ PLFEG  +EPCLLHGDLWSGNISSD NGEPVILDPACYYGHNEAEFGMSWC
Sbjct: 222 GQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTNGEPVILDPACYYGHNEAEFGMSWC 281

Query: 268 AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 327
           AGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 282 AGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLK 341

Query: 328 V 328
            
Sbjct: 342 A 342

Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 2

>sp|Q8K274|KT3K_MOUSE Ketosamine-3-kinase OS=Mus musculus GN=Fn3krp PE=2 SV=2

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/285 (41%), Positives = 161/285 (56%), Gaps = 26/285 (9%)

Query: 60  GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
           GGGCI+    Y TD G  FVK N ++    MFEGE   L A+ +T T++ P+P KV   P
Sbjct: 21  GGGCISQGQSYDTDKGRVFVKVNSKAEARRMFEGEMASLTAILKTGTVKVPKPIKVVDAP 80

Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 157
            GGS ++ME ++      + +  G +LA++H            +AG   KG         
Sbjct: 81  GGGSMLVMEHLDMRYLSSHATKLGTQLADLHLENKRLGERLLKEAGTVGKGGEQAERQYV 140

Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
             FGFDV    G  PQ+N W  NW+EFYA  R+  Q+ +   + GD    +    L   +
Sbjct: 141 DQFGFDVVTCCGYLPQVNDWQKNWVEFYARQRIQPQMDMVEKKSGDREALELWSALQLKI 200

Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSF 274
             LF  + + P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFRDLEIVPALLHGDLWGGNVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSF 259

Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSII 319
           Y++Y   +PK PGFEKR  LY L+HYLNH+N FGSGYR S+L+I+
Sbjct: 260 YSAYHSKIPKTPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIM 304

Phosphorylates psicosamines and ribulosamines, but not fructosamines, on the third carbon of the sugar moiety. Protein-bound psicosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HA64|KT3K_HUMAN Ketosamine-3-kinase OS=Homo sapiens GN=FN3KRP PE=1 SV=2

 Score =  219 bits (559), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 163/290 (56%), Gaps = 26/290 (8%)

Query: 60  GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
           GGGCI+    Y TD G  FVK N ++    MFEGE   L A+ +T T++ P+P KV   P
Sbjct: 21  GGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLTAILKTNTVKVPKPIKVLDAP 80

Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 157
            GGS ++ME ++      + +  G +LA++H            +AG   +G         
Sbjct: 81  GGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFV 140

Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
             FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ +   + GD    Q    L   +
Sbjct: 141 ARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKI 200

Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 274
             LF  + + P LLHGDLW GN++ D +G PVI DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFRDLEIIPALLHGDLWGGNVAEDSSG-PVIFDPASFYGHSEYELAIAGMFGGFSSSF 259

Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
           Y++Y   +PK PGFEKR  LY L+HYLNH+N FGSGYR S+L+I+ + ++
Sbjct: 260 YSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIMRNLVK 309

Phosphorylates psicosamines and ribulosamines, but not fructosamines, on the third carbon of the sugar moiety. Protein-bound psicosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|P74594|Y1563_SYNY3 Uncharacterized protein slr1563 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1563 PE=3 SV=1

 Score =  218 bits (555), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/288 (43%), Positives = 174/288 (60%), Gaps = 19/288 (6%)

Query: 46  SEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRT 105
           + G+   I +   V GGCIN           +FVK N++    MF+ EALGL AM  T+T
Sbjct: 19  TTGQPFRIQERRSVSGGCINQGYCLVDGEQKYFVKLNQAQQWQMFQAEALGLEAMAATQT 78

Query: 106 IRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF---GKKLAEMHKAGKSSKGFGFDV 162
           IR PRP   G+   G SY+++E++EFG  RGN   +   G+ LA +H+AG S++ FG+  
Sbjct: 79  IRVPRPICHGS-SAGHSYLVLEWLEFG--RGNHDSWYRMGQNLAALHQAGGSAQ-FGWQT 134

Query: 163 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD----STIYQRGHRLMKNLAPL 218
           DNTIG+TPQ N WT +W +F+AEHRLGYQL LA  + G+    + +  +  +L+ +  P 
Sbjct: 135 DNTIGATPQPNPWTDSWADFFAEHRLGYQLALARRRAGNFPDPAVVVPKVKQLLGDRQP- 193

Query: 219 FEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNS 277
                  P L+HGDLWSGN +    GEPVILDPA YYG  E +  M+    GF  +FY  
Sbjct: 194 ------TPALVHGDLWSGNGAILTTGEPVILDPATYYGDGEVDLAMTELFGGFPAAFYQG 247

Query: 278 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 325
           Y  + P +PG+++R+ LY LYH LNH+NLFG GY+  A  ++   LR+
Sbjct: 248 YHSISPAEPGYQQRKILYNLYHILNHFNLFGGGYQQQAQQMLKQCLRI 295

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9ER35|FN3K_MOUSE Fructosamine-3-kinase OS=Mus musculus GN=Fn3k PE=2 SV=1

 Score =  212 bits (539), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 157/290 (54%), Gaps = 26/290 (8%)

Query: 60  GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
           GGGCI+    Y TD+G  FVK NR +    MFEGE   L A+  T  +R P+P KV  LP
Sbjct: 21  GGGCISEGYAYYTDSGPVFVKVNRRTQARQMFEGEMASLEALRNTGLVRVPKPMKVIDLP 80

Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH----------KAGKSSKG----------- 157
            GG+  +ME ++  S     S  G+++A++H          K  +++ G           
Sbjct: 81  GGGAVFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKSKTRQNTVGCGAEGAEPQGV 140

Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
             FGF      G  PQ+N+W  +W  F+  HRL  QL L    Y D    +   RL   +
Sbjct: 141 TKFGFHTVTCCGFIPQVNEWQEDWPTFFTRHRLQAQLDLIEKDYADRETQELWSRLQVKI 200

Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSF 274
             LF G+ + P LLHGDLWSGN++ D  G PVI DPA +YGH+E E  + S   GF  SF
Sbjct: 201 PDLFAGIEIVPALLHGDLWSGNVAEDDQG-PVIYDPASFYGHSEFELAIASMFGGFPRSF 259

Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
           + +Y   +PK PGF+KR  LY L++YLNH+N FG  YRS +L ++   LR
Sbjct: 260 FTAYHRKIPKAPGFDKRLLLYQLFNYLNHWNHFGREYRSPSLGVMRKLLR 309

May initiate a process leading to the deglycation of fructoselysine and of glycated proteins. May play a role in the phosphorylation of 1-deoxy-1-morpholinofructose (DMF), fructoselysine, fructoseglycine, fructose and glycated lysozyme.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9H479|FN3K_HUMAN Fructosamine-3-kinase OS=Homo sapiens GN=FN3K PE=1 SV=1

 Score =  208 bits (530), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/290 (39%), Positives = 155/290 (53%), Gaps = 26/290 (8%)

Query: 60  GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
           G GCI+    Y TDAG  FVK NR +    MFEGE   L A+  T  +R PRP KV  LP
Sbjct: 21  GAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLEALRSTGLVRVPRPMKVIDLP 80

Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH---------------KAGKSSKG------ 157
            GG+  +ME ++  S     S  G+++A++H                 G+  +G      
Sbjct: 81  GGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKLKEEENTVGRRGEGAEPQYV 140

Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
             FGF      G  PQ+N+W  +W  F+A HRL  QL L    Y D    +   RL   +
Sbjct: 141 DKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLIEKDYADREARELWSRLQVKI 200

Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 274
             LF G+ + P LLHGDLWSGN++ D  G P+I DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFCGLEIVPALLHGDLWSGNVAEDDVG-PIIYDPASFYGHSEFELAIALMFGGFPRSF 259

Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
           + +Y   +PK PGF++R  LY L++YLNH+N FG  YRS +L  +   L+
Sbjct: 260 FTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPSLGTMRRLLK 309

May initiate a process leading to the deglycation of fructoselysine and of glycated proteins. May play a role in the phosphorylation of 1-deoxy-1-morpholinofructose (DMF), fructoselysine, fructoseglycine, fructose and glycated lysozyme.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9KRU5|Y1539_VIBCH Uncharacterized protein VC_1539 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1539 PE=3 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 19/288 (6%)

Query: 45  LSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 102
           LSE  GK  H+ +   V GG IN           +FVKTN+    + F  E   L  M E
Sbjct: 9   LSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRE 68

Query: 103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSV--FGKKLAEMHKAGKSSKGFGF 160
           + T++ P     G   T  +Y+++ ++        +    FG +LA +H+ G+  K FGF
Sbjct: 69  SNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQ-KEFGF 126

Query: 161 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK----NLA 216
           D+DN IG+T Q N W   W  F+AE R+G+QL+L  ++  + T       ++K    N +
Sbjct: 127 DIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKTRLANHS 186

Query: 217 PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFY 275
           P        P LLHGDLW GN+++  NG P+  DPACY+G  E +  ++ W  GF   F+
Sbjct: 187 P-------RPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIALAEWFGGFQPEFF 238

Query: 276 NSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
             Y  V P   G+E+R+D+Y LYH LNHYN FG  Y   A  +I+  L
Sbjct: 239 QGYESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKIL 286

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

>sp|Q87PM1|Y1481_VIBPA Uncharacterized protein VP1481 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VP1481 PE=3 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 143/281 (50%), Gaps = 27/281 (9%)

Query: 52  HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 111
            IT+   + GG I+ +         +FVK N       FE EA  L  + ET TI  P  
Sbjct: 18  QITEKVRLSGGDISESYMINDGEQRYFVKINDREFLHKFEVEAESLHLLRETSTIFVPEV 77

Query: 112 FKVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST 169
             VG      ++II+ ++         N   FG++LA++H+ G+  K FGFD DN +GST
Sbjct: 78  VLVGK-TKNNAFIILNYLPTKPLDDPENSFKFGQQLAQLHQWGEQ-KEFGFDTDNYLGST 135

Query: 170 PQINKWTSNWIEFYAEHRLGYQLKLA---------LDQYGDSTIYQRGHRLMKNLAPLFE 220
            Q N+W   W  F+AE R+G+QL+L          +D + D        +L+ N  P   
Sbjct: 136 LQPNQWHKKWCMFFAEQRIGWQLQLLKEKGVTLVDIDDFIDVV-----KQLLANHTP--- 187

Query: 221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYF 279
               EP LLHGDLW+GN++    G P+  DPACY+G  E +  M+    GF   FY  Y 
Sbjct: 188 ----EPSLLHGDLWNGNVALTAFG-PICFDPACYWGDRECDIAMTELFGGFQPEFYQGYE 242

Query: 280 EVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIID 320
            VMP  PG+ +R+D+Y LYH LNH NLFG  Y   A   I+
Sbjct: 243 SVMPLLPGYHERKDIYNLYHILNHCNLFGGHYLEQAQLTIN 283

Vibrio parahaemolyticus (taxid: 670)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
225453762	330	PREDICTED: protein-ribulosamine 3-kinase	0.996	0.990	0.827	1e-161
147781802	298	hypothetical protein VITISV_011421 [Viti	0.905	0.996	0.872	1e-155
255541454	402	kinase, putative [Ricinus communis] gi|2	0.899	0.733	0.864	1e-154
224067842	296	predicted protein [Populus trichocarpa]	0.902	1.0	0.861	1e-154
356505144	332	PREDICTED: uncharacterized protein At3g6	0.993	0.981	0.789	1e-153
449432201	332	PREDICTED: protein-ribulosamine 3-kinase	0.929	0.918	0.809	1e-150
297817418	326	fructosamine kinase family protein [Arab	0.923	0.929	0.825	1e-150
22331896	326	protein kinase-like protein [Arabidopsis	0.932	0.938	0.820	1e-149
8388624	318	putative protein [Arabidopsis thaliana]	0.908	0.937	0.807	1e-142
357114344	343	PREDICTED: uncharacterized protein At3g6	0.945	0.903	0.751	1e-142

>gi|225453762|ref|XP_002274443.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Vitis vinifera] gi|296089080|emb|CBI38783.3| unnamed protein product [Vitis vinifera]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/330 (82%), Positives = 294/330 (89%), Gaps = 3/330 (0%)

Query: 2   MATTHVGFLSFGSFLP-LP--SRISFSKRRTFAMAALSDDPIREWILSEGKATHITKICP 58
           M   HVG +S G   P LP    +SF K + F MAAL +DPIREWILSEGKAT IT+I P
Sbjct: 1   MVAAHVGLVSSGCCFPSLPWFPSLSFPKTKPFVMAALGEDPIREWILSEGKATQITRISP 60

Query: 59  VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
           VGGGCINLASRY TDAGSFFVKTNRSIGPSMFEGEALGLGAMYET++IR PRPFKVG LP
Sbjct: 61  VGGGCINLASRYDTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETKSIRVPRPFKVGPLP 120

Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 178
           TGGSYIIMEFIEFG SRG+Q+V G+KLAEMHKAGKS KGFGFDVDNTIGSTPQIN WTS+
Sbjct: 121 TGGSYIIMEFIEFGRSRGDQAVLGRKLAEMHKAGKSEKGFGFDVDNTIGSTPQINTWTSD 180

Query: 179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 238
           W++FYAEHRLGYQLKLALDQYGDSTIY +G +LMKNL  LFE V +EPCLLHGDLWSGNI
Sbjct: 181 WVKFYAEHRLGYQLKLALDQYGDSTIYAKGEKLMKNLGRLFENVEIEPCLLHGDLWSGNI 240

Query: 239 SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 298
           SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYN+YFEVMPKQ GFEKRRD+YMLY
Sbjct: 241 SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNAYFEVMPKQAGFEKRRDVYMLY 300

Query: 299 HYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328
           HYLNHYNLFGSGYRSSA+SIIDDYLR+  +
Sbjct: 301 HYLNHYNLFGSGYRSSAMSIIDDYLRIFNI 330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147781802|emb|CAN65444.1| hypothetical protein VITISV_011421 [Vitis vinifera]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 259/297 (87%), Positives = 277/297 (93%)

Query: 32  MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFE 91
           +AAL +DPIREWILSEGKAT ITKI PVGGGCINLASRY TDAGSFFVKTNRSIGPSMFE
Sbjct: 2   VAALGEDPIREWILSEGKATQITKISPVGGGCINLASRYDTDAGSFFVKTNRSIGPSMFE 61

Query: 92  GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKA 151
           GEALGLGAMYET++IR PRPFKVG LPTGGSYIIMEFIEFG SRG+Q+V G+KLAEMHKA
Sbjct: 62  GEALGLGAMYETKSIRVPRPFKVGPLPTGGSYIIMEFIEFGRSRGDQAVLGRKLAEMHKA 121

Query: 152 GKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRL 211
           GKS KGFGFDVDNTIGSTPQIN WTS+W++FYAEHRLGYQLKLALDQYGDSTIY +G +L
Sbjct: 122 GKSEKGFGFDVDNTIGSTPQINTWTSDWVKFYAEHRLGYQLKLALDQYGDSTIYAKGEKL 181

Query: 212 MKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFG 271
           MK L  LFE V +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFG
Sbjct: 182 MKILGRLFENVEIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFG 241

Query: 272 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328
           GSFYN+YFEVMPKQ GFEKRRD+YMLYHYLNHYNLFGSGYRSSA+SIIDDYLR+  +
Sbjct: 242 GSFYNAYFEVMPKQAGFEKRRDVYMLYHYLNHYNLFGSGYRSSAMSIIDDYLRIFNI 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541454|ref|XP_002511791.1| kinase, putative [Ricinus communis] gi|223548971|gb|EEF50460.1| kinase, putative [Ricinus communis]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/295 (86%), Positives = 277/295 (93%)

Query: 34  ALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGE 93
           A+S+DPIREWILSEG AT IT+I  +GGGCINLA+RY TDAG+FFVKTNRSIGPSMFEGE
Sbjct: 108 AMSEDPIREWILSEGNATKITRISSIGGGCINLANRYDTDAGTFFVKTNRSIGPSMFEGE 167

Query: 94  ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGK 153
           ALGLGAMYETRTIR PRPFKVG LPTGGSYIIMEFIEFG+SRGNQ + GKKLAEMHKAGK
Sbjct: 168 ALGLGAMYETRTIRVPRPFKVGPLPTGGSYIIMEFIEFGASRGNQPLLGKKLAEMHKAGK 227

Query: 154 SSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK 213
           S KGFGFDVDNTIGSTPQIN WTS+WIEFY  HRLGYQLKLALD+YGDS+IYQ+G RL+K
Sbjct: 228 SQKGFGFDVDNTIGSTPQINTWTSDWIEFYGVHRLGYQLKLALDKYGDSSIYQKGQRLVK 287

Query: 214 NLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGS 273
           N+APLFEG+  EPCLLHGDLWSGNISSDKNG+PVILDPACYYGHNEAEFGMSWCAGFG +
Sbjct: 288 NMAPLFEGIVTEPCLLHGDLWSGNISSDKNGKPVILDPACYYGHNEAEFGMSWCAGFGEA 347

Query: 274 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328
           FYN+YFEVMPKQPGF+KRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLR+LK 
Sbjct: 348 FYNAYFEVMPKQPGFDKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRILKA 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067842|ref|XP_002302560.1| predicted protein [Populus trichocarpa] gi|222844286|gb|EEE81833.1| predicted protein [Populus trichocarpa]

 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/296 (86%), Positives = 275/296 (92%)

Query: 33  AALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEG 92
           AA+SDDPI +WI+SEG AT IT+  P+GGGCIN A RY TDAGSFFVKTNR IGPSMFEG
Sbjct: 1   AAMSDDPISDWIMSEGNATQITRTSPIGGGCINNARRYDTDAGSFFVKTNRGIGPSMFEG 60

Query: 93  EALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 152
           EALGLGAMYETRTIR PRPFKVG LPTGGSYIIMEFIEFG+SRGNQSV G+KLAEMHKAG
Sbjct: 61  EALGLGAMYETRTIRVPRPFKVGPLPTGGSYIIMEFIEFGASRGNQSVLGRKLAEMHKAG 120

Query: 153 KSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 212
           KS KGFGFDVDNTIGSTPQIN WTS+WIEFY +HRLGYQLKLALDQYGDSTIYQ+G RL+
Sbjct: 121 KSEKGFGFDVDNTIGSTPQINTWTSDWIEFYGKHRLGYQLKLALDQYGDSTIYQKGKRLV 180

Query: 213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 272
           KN+APLF+ + +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG
Sbjct: 181 KNMAPLFQNIVIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 240

Query: 273 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328
           SFYN+YFEVMPKQPGFEKRR++Y+LYHYLNHYNLFGS YRSSA+SIIDDYL ML V
Sbjct: 241 SFYNAYFEVMPKQPGFEKRREIYLLYHYLNHYNLFGSSYRSSAMSIIDDYLLMLGV 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505144|ref|XP_003521352.1| PREDICTED: uncharacterized protein At3g61080, chloroplastic-like [Glycine max]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/333 (78%), Positives = 294/333 (88%), Gaps = 7/333 (2%)

Query: 2   MATTHVGFLSFGSFLP-LPS--RISFSKRRT---FAMAALSDDPIREWILSEGKATHITK 55
           M + HVG +S  +  P LP   R SF+K ++   F+M+ +S DP+REWILS+GKAT ITK
Sbjct: 1   MTSAHVGAMSSSTCFPSLPRLLRPSFTKTKSSPKFSMS-MSKDPVREWILSDGKATEITK 59

Query: 56  ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 115
           I PVGGGCINLASRY TDAGSFFVKTNRSIGPSMFE EALGLGAMYET TIR P+P+KVG
Sbjct: 60  ISPVGGGCINLASRYDTDAGSFFVKTNRSIGPSMFEAEALGLGAMYETGTIRVPKPYKVG 119

Query: 116 ALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 175
            LPTGGS+IIMEFI+FG+SRG QS  G+KLAEMHKAGKSSKGFGFDVDNTIGSTPQ+N W
Sbjct: 120 PLPTGGSFIIMEFIQFGASRGYQSDLGRKLAEMHKAGKSSKGFGFDVDNTIGSTPQVNTW 179

Query: 176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWS 235
           +S+W++FY EHRLGYQLKLALDQYGD TIY +G RL+K++APLF  V +EPCLLHGDLWS
Sbjct: 180 SSDWVQFYGEHRLGYQLKLALDQYGDRTIYDKGQRLVKSMAPLFANVVIEPCLLHGDLWS 239

Query: 236 GNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLY 295
           GNISSDKNGEPVILDPACYYGH+EAEFGMSWCAGFGGSFYNSYFEVMPK PGFE+RRDLY
Sbjct: 240 GNISSDKNGEPVILDPACYYGHSEAEFGMSWCAGFGGSFYNSYFEVMPKLPGFEERRDLY 299

Query: 296 MLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328
           MLYHYLNHYNLFGSGYRSSA+SIIDDYL +LK 
Sbjct: 300 MLYHYLNHYNLFGSGYRSSAMSIIDDYLAILKA 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432201|ref|XP_004133888.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like [Cucumis sativus] gi|449480088|ref|XP_004155796.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like [Cucumis sativus]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/305 (80%), Positives = 279/305 (91%)

Query: 24  FSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNR 83
           ++KR   ++AAL DDPI+EWILSEGKAT ITKI PVGGGCIN A+RY TDAGSFFVK NR
Sbjct: 28  YAKRHPVSVAALGDDPIKEWILSEGKATQITKISPVGGGCINQANRYDTDAGSFFVKRNR 87

Query: 84  SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGK 143
           SIGPSMFE EALGL AMYET+TIR P+PFK G LP+GGSYIIMEFIEFGSSRGNQS  G+
Sbjct: 88  SIGPSMFEAEALGLSAMYETQTIRVPKPFKFGPLPSGGSYIIMEFIEFGSSRGNQSELGR 147

Query: 144 KLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 203
           KLAEMHK+GKS KGFGFDV+NTIGSTPQ+N W+S+W+ FYAE RLG+QL+LA+DQYGDST
Sbjct: 148 KLAEMHKSGKSDKGFGFDVNNTIGSTPQMNTWSSDWVRFYAEERLGFQLRLAVDQYGDST 207

Query: 204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 263
           IY++G RL K++ PLF+ V +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG
Sbjct: 208 IYEKGQRLAKSIGPLFDNVVIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 267

Query: 264 MSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
           MSWCAGFGGSFY++YF+VMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYL
Sbjct: 268 MSWCAGFGGSFYDAYFKVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYL 327

Query: 324 RMLKV 328
           R+L+ 
Sbjct: 328 RILQA 332

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817418|ref|XP_002876592.1| fructosamine kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322430|gb|EFH52851.1| fructosamine kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/303 (82%), Positives = 276/303 (91%)

Query: 26  KRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI 85
           + + FAMAA+S+DPIREWIL++GKAT ITKI  VGGGCINLAS Y TDAGSFFVKTNRSI
Sbjct: 24  RPKIFAMAAMSEDPIREWILTQGKATQITKIGSVGGGCINLASHYHTDAGSFFVKTNRSI 83

Query: 86  GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKL 145
           GP+MFEGEALGL AMYETRTIR P+P KVG  PTGGSYIIMEFI+FG SRGNQ+  G+KL
Sbjct: 84  GPAMFEGEALGLEAMYETRTIRVPKPHKVGEFPTGGSYIIMEFIDFGGSRGNQAELGRKL 143

Query: 146 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205
           AEMHKAGKSSKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGDS IY
Sbjct: 144 AEMHKAGKSSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGDSAIY 203

Query: 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS 265
           Q+GH L++N+A LFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+FGMS
Sbjct: 204 QKGHTLIQNMASLFENVVIEPCLLHGDLWSGNIAYDKNSEPVILDPACYYGHNEADFGMS 263

Query: 266 WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 325
           WCAGFG SFYN+YF+VMPKQPG+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRM
Sbjct: 264 WCAGFGESFYNAYFKVMPKQPGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRM 323

Query: 326 LKV 328
           LKV
Sbjct: 324 LKV 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331896|ref|NP_191667.2| protein kinase-like protein [Arabidopsis thaliana] gi|209572623|sp|Q9LEW8.2|FN3KR_ARATH RecName: Full=Protein-ribulosamine 3-kinase, chloroplastic; AltName: Full=Fructosamine 3-kinase-related protein; Short=AtFN3K-RP; Flags: Precursor gi|17979159|gb|AAL49775.1| unknown protein [Arabidopsis thaliana] gi|21436461|gb|AAM51431.1| unknown protein [Arabidopsis thaliana] gi|332646630|gb|AEE80151.1| protein kinase-like protein [Arabidopsis thaliana]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/307 (82%), Positives = 276/307 (89%), Gaps = 1/307 (0%)

Query: 23  SFSKRRTF-AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 81
           +FS R  F AMAA+S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 82  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 141
           NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query: 142 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query: 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 261
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct: 200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query: 262 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 321
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query: 322 YLRMLKV 328
           YLRMLK 
Sbjct: 320 YLRMLKA 326

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8388624|emb|CAB94144.1| putative protein [Arabidopsis thaliana]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/307 (80%), Positives = 272/307 (88%), Gaps = 9/307 (2%)

Query: 23  SFSKRRTF-AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 81
           +FS R  F AMAA+S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 82  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 141
           NRSIGP+MFEGEALGL AMYETRTIRA      G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRA------GELPTGGSYIIMEFIDFGGSRGNQAEL 133

Query: 142 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 134 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 193

Query: 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 261
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPA  YGHNEA+
Sbjct: 194 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPA--YGHNEAD 251

Query: 262 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 321
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 252 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 311

Query: 322 YLRMLKV 328
           YLRMLK 
Sbjct: 312 YLRMLKA 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357114344|ref|XP_003558960.1| PREDICTED: uncharacterized protein At3g61080, chloroplastic-like isoform 1 [Brachypodium distachyon]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/314 (75%), Positives = 274/314 (87%), Gaps = 4/314 (1%)

Query: 19  PSRISFSKRRTFA----MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDA 74
           PSR S   RR  +    +AA+ DDPI+EWIL+EGKAT IT I  +GGGCIN A RY TDA
Sbjct: 30  PSRRSACTRRAASKLSIVAAMGDDPIKEWILTEGKATQITGISSIGGGCINSAQRYITDA 89

Query: 75  GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134
           GSFFVKTNR IGP+MFEGEALGL AMY+T++IR P P+KVG+LPTGGS+IIMEFI+FG S
Sbjct: 90  GSFFVKTNRRIGPAMFEGEALGLKAMYDTKSIRVPLPYKVGSLPTGGSFIIMEFIQFGRS 149

Query: 135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194
           RG+QS  G+KLAEMHKA KS KG+GF V+NTIGSTPQIN WT++WIEFY++HRLGYQL+L
Sbjct: 150 RGDQSALGRKLAEMHKAAKSDKGYGFYVENTIGSTPQINTWTADWIEFYSKHRLGYQLEL 209

Query: 195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 254
              ++GDS IY++G +L+KN+ PLF+G  +EPCLLHGDLWSGNISSD NG+PVILDPACY
Sbjct: 210 ISQRFGDSAIYEKGQQLIKNMHPLFDGAVIEPCLLHGDLWSGNISSDANGDPVILDPACY 269

Query: 255 YGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSS 314
           YGHNEAEFGMSWCAGFGG FY+SYF+VMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSS
Sbjct: 270 YGHNEAEFGMSWCAGFGGEFYSSYFQVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSS 329

Query: 315 ALSIIDDYLRMLKV 328
           A+SII+DYLRMLK 
Sbjct: 330 AMSIIEDYLRMLKA 343

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
TAIR|locus:2101022	326	AT3G61080 [Arabidopsis thalian	0.929	0.935	0.784	8.1e-131
UNIPROTKB|F1RZZ3	309	FN3KRP "Uncharacterized protei	0.506	0.537	0.410	2.9e-50
UNIPROTKB|Q0P592	309	FN3KRP "Uncharacterized protei	0.490	0.521	0.411	1.8e-48
RGD|1304570	309	Fn3krp "fructosamine-3-kinase-	0.576	0.611	0.367	2.9e-48
MGI|MGI:1926834	309	Fn3k "fructosamine 3 kinase" [	0.506	0.537	0.404	7.7e-48
UNIPROTKB|F1S006	309	FN3K "Uncharacterized protein"	0.567	0.601	0.363	1.8e-46
UNIPROTKB|E1BRW9	309	FN3KRP "Uncharacterized protei	0.506	0.537	0.386	7.6e-46
UNIPROTKB|H9GWC7	302	FN3KRP "Uncharacterized protei	0.527	0.572	0.378	9.7e-46
UNIPROTKB|F1MK10	309	FN3K "Uncharacterized protein"	0.567	0.601	0.358	6.7e-45
UNIPROTKB|Q9KRU5	288	VC_1539 "Uncharacterized prote	0.832	0.947	0.330	1.7e-34

TAIR|locus:2101022 AT3G61080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
 Identities = 240/306 (78%), Positives = 263/306 (85%)

Query:    23 SFSKRRTF-AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 81
             +FS R  F AMAA+S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct:    20 NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query:    82 NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 141
             NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct:    80 NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query:   142 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201
             G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct:   140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query:   202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 261
             S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct:   200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query:   262 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDD 321
             FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRD             FGSGYRSSA+SIIDD
Sbjct:   260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query:   322 YLRMLK 327
             YLRMLK
Sbjct:   320 YLRMLK 325

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=RCA

UNIPROTKB|F1RZZ3 FN3KRP "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 353 (129.3 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
 Identities = 69/168 (41%), Positives = 97/168 (57%)

Query:   158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
             FGFDV    G  PQ+N W S+W+ FYA  R+  Q++L     GD    +    L   +  
Sbjct:   143 FGFDVVTCCGYLPQVNDWQSDWVTFYARQRIQPQMELLEQGSGDREARELWAALQLKIPD 202

Query:   218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 276
             LF  +++ P LLHGDLW GN++ D +G PVI DPA +YGH+E E  ++    GF G+FY+
Sbjct:   203 LFRDLDIVPALLHGDLWGGNVAEDPSG-PVIFDPASFYGHSEYELAIAGMFGGFSGAFYS 261

Query:   277 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 324
             +Y   +PK PGFE+R               FG+GYR S+LSI+ + +R
Sbjct:   262 AYHGRVPKAPGFERRHQLYQLFHYLNHWNHFGAGYRGSSLSIMRNLVR 309

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q0P592 FN3KRP "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 346 (126.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 67/163 (41%), Positives = 92/163 (56%)

Query:   158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
             FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ L   + GD    +    L   +  
Sbjct:   143 FGFDVVTCCGYLPQVNDWQQDWVTFYARQRIQPQMDLVEQRSGDREARELWAALQLKIPD 202

Query:   218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 276
             LF  +++ P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  +FY+
Sbjct:   203 LFHDLDIIPALLHGDLWGGNVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSAFYS 261

Query:   277 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSII 319
             +Y   +PK PGFEKR               FGSGYR S+LSI+
Sbjct:   262 AYHSKIPKAPGFEKRLKLYQLFHYLNHWNHFGSGYRGSSLSIM 304

GO:0016301 "kinase activity" evidence=IEA

RGD|1304570 Fn3krp "fructosamine-3-kinase-related protein" [Rattus norvegicus (taxid:10116)]

 Score = 339 (124.4 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
 Identities = 75/204 (36%), Positives = 104/204 (50%)

Query:   130 EFGSSRGNQSVFGKKLAE--MHKAGKSSKG-----------FGFDVDNTIGSTPQINKWT 176
             + GS   +  +  KKL E  + +AG   KG           FGFDV    G  PQ+N W 
Sbjct:   102 KLGSQLADLHLENKKLGERLLKEAGTVGKGGGLAERQYVDQFGFDVVTCCGYLPQVNDWQ 161

Query:   177 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSG 236
              +W+ FYA  R+  Q+ +   + GD         L   +  LF  + + P LLHGDLW G
Sbjct:   162 KDWVTFYARQRIQPQMDMVEKKSGDREALGLWSALQLKIPDLFRDLEIVPSLLHGDLWGG 221

Query:   237 NISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXX 295
             N++ D +G P+I DPA +YGH+E E  ++    GF  SFY++Y   +P  PGFEKR    
Sbjct:   222 NVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSFYSAYHSKIPTTPGFEKRLQLY 280

Query:   296 XXXXXXXXXXXFGSGYRSSALSII 319
                        FGSGYR S+L+I+
Sbjct:   281 QLFHYLNHWNHFGSGYRGSSLNIM 304

GO:0016301 "kinase activity" evidence=IEA

MGI|MGI:1926834 Fn3k "fructosamine 3 kinase" [Mus musculus (taxid:10090)]

 Score = 331 (121.6 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
 Identities = 68/168 (40%), Positives = 88/168 (52%)

Query:   158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
             FGF      G  PQ+N+W  +W  F+  HRL  QL L    Y D    +   RL   +  
Sbjct:   143 FGFHTVTCCGFIPQVNEWQEDWPTFFTRHRLQAQLDLIEKDYADRETQELWSRLQVKIPD 202

Query:   218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYN 276
             LF G+ + P LLHGDLWSGN++ D  G PVI DPA +YGH+E E  + S   GF  SF+ 
Sbjct:   203 LFAGIEIVPALLHGDLWSGNVAEDDQG-PVIYDPASFYGHSEFELAIASMFGGFPRSFFT 261

Query:   277 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 324
             +Y   +PK PGF+KR               FG  YRS +L ++   LR
Sbjct:   262 AYHRKIPKAPGFDKRLLLYQLFNYLNHWNHFGREYRSPSLGVMRKLLR 309

GO:0005829 "cytosol" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IDA

GO:0030389 "fructosamine metabolic process" evidence=IDA

UNIPROTKB|F1S006 FN3K "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 312 (114.9 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 72/198 (36%), Positives = 101/198 (51%)

Query:   137 NQSVFGKKL-AEMHKAGKSSKG--------FGFDVDNTIGSTPQINKWTSNWIEFYAEHR 187
             NQ + G+KL  E  + G+ ++G        FGF      G  PQ+N+W  +W  F+A HR
Sbjct:   114 NQKL-GEKLRGEESRVGQRAEGAGPQYVTKFGFHTVTCCGFIPQVNEWQDDWPTFFARHR 172

Query:   188 LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 247
             L  QL L    Y D    +   RL   +  LF G+ + P LLHGDLWSGN++ D  G PV
Sbjct:   173 LQAQLDLIEKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDLG-PV 231

Query:   248 ILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXX 306
             + DPA +YGH+E E  ++    GF   F+ +Y   +PK PGF++R               
Sbjct:   232 VYDPASFYGHSEFELAIALMFGGFPRPFFTAYHRKVPKAPGFDRRLLLYQLFNYLNHWNH 291

Query:   307 FGSGYRSSALSIIDDYLR 324
             FG  YRS +L  +   L+
Sbjct:   292 FGRQYRSPSLGTMRKLLK 309

GO:0030389 "fructosamine metabolic process" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IEA

UNIPROTKB|E1BRW9 FN3KRP "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 332 (121.9 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
 Identities = 65/168 (38%), Positives = 93/168 (55%)

Query:   158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
             FGF      G  PQ+N W ++W+ F+A  R+  Q+ +     GD    +   RL   +  
Sbjct:   143 FGFHTVTCCGYLPQVNDWQADWVTFFARQRIQPQMDMIEKNSGDREARELWARLQLKIPS 202

Query:   218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 276
             LF  V + P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  SFY+
Sbjct:   203 LFCDVEIVPALLHGDLWGGNVAEDDSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSFYS 261

Query:   277 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 324
             +Y   +PK PGFEKR               FGSGYR S+L+I+ + ++
Sbjct:   262 AYHSKIPKAPGFEKRLKLYQLFHYMNHWNHFGSGYRGSSLNIMRNLVK 309

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|H9GWC7 FN3KRP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 315 (115.9 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 67/177 (37%), Positives = 91/177 (51%)

Query:   135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194
             R   S  GK   ++ +A      FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ +
Sbjct:   122 RKEASTVGKGGGQVDRAFVDK--FGFDVVTCCGYLPQVNDWQDDWVTFYARQRIQPQMDM 179

Query:   195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 254
                  GD    +    L   +  LF  +++ P LLHGDLW+GN++ D +G PVI DPA +
Sbjct:   180 VEKGSGDREARELWSALQLKIPDLFRDLDIVPALLHGDLWAGNVAEDSSG-PVIFDPASF 238

Query:   255 YGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSG 310
             YGH E E  ++    GFG SFY++Y   +PK PGFE R               FGSG
Sbjct:   239 YGHAEYELAIAGMFGGFGRSFYSAYHGAIPKAPGFEARLQLYQLFHYLNHWNHFGSG 295

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|F1MK10 FN3K "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 317 (116.6 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 71/198 (35%), Positives = 104/198 (52%)

Query:   137 NQSVFGKKLAEM-HKAGKSSKG--------FGFDVDNTIGSTPQINKWTSNWIEFYAEHR 187
             NQ + G+KL E  ++ G+ ++G        FGF      G  PQ+N+W  +W  F+  HR
Sbjct:   114 NQKL-GEKLREEENRVGQRAEGAGPRYVAKFGFHTVTCCGFIPQVNEWQDDWPTFFTRHR 172

Query:   188 LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 247
             L  QL L    Y D    +   +L   +  LF G+ + P LLHGDLWSGN++ D +G P+
Sbjct:   173 LQAQLDLIEKDYADREAQELWSQLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDSG-PI 231

Query:   248 ILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXX 306
             I DPA +YGH+E E  ++    GF  SF+ +Y + +PK PGF++R               
Sbjct:   232 IYDPASFYGHSEFELAIALMFGGFPRSFFTAYHQKVPKAPGFDRRLLLYQLFNYLNHWNH 291

Query:   307 FGSGYRSSALSIIDDYLR 324
             FG  YRS +L  +   L+
Sbjct:   292 FGRQYRSPSLGTMRKLLK 309

GO:0030389 "fructosamine metabolic process" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IEA

UNIPROTKB|Q9KRU5 VC_1539 "Uncharacterized protein VC_1539" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 94/284 (33%), Positives = 139/284 (48%)

Query:    45 LSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 102
             LSE  GK  H+ +   V GG IN           +FVKTN+    + F  E   L  M E
Sbjct:     9 LSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRE 68

Query:   103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSV-FGKKLAEMHKAGKSSKGFGF 160
             + T++ P     G   T  +Y+++ ++         +S  FG +LA +H+ G+  K FGF
Sbjct:    69 SNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQ-KEFGF 126

Query:   161 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFE 220
             D+DN IG+T Q N W   W  F+AE R+G+QL+L  ++  + T       ++K       
Sbjct:   127 DIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKTR---LA 183

Query:   221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYF 279
               +  P LLHGDLW GN+++  NG P+  DPACY+G  E +  ++ W  GF   F+  Y 
Sbjct:   184 NHSPRPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIALAEWFGGFQPEFFQGYE 242

Query:   280 EVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYL 323
              V P   G+E+R+D             FG  Y   A  +I+  L
Sbjct:   243 SVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKIL 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2XBT1	FN3KR_ORYSI	2, ., 7, ., 1, ., 1, 7, 2	0.7774	0.9176	0.8801	N/A	no
Q9KRU5	Y1539_VIBCH	No assigned EC number	0.3611	0.8201	0.9340	yes	no
Q10SM2	FN3KR_ORYSJ	2, ., 7, ., 1, ., 1, 7, 2	0.7774	0.9176	0.8801	yes	no
Q9HA64	KT3K_HUMAN	2, ., 7, ., 1, ., -	0.4	0.8048	0.8543	yes	no
Q9LEW8	FN3KR_ARATH	2, ., 7, ., 1, ., 1, 7, 2	0.8208	0.9329	0.9386	yes	no
Q8D9N5	Y2562_VIBVU	No assigned EC number	0.3248	0.8079	0.9201	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00026253001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (330 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00022056001	SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (174 aa)	•		•	•					0.828
	GSVIVG00015101001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (525 aa)	•								0.575
	GSVIVG00036954001	SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (121 aa)	•			•					0.558
	GSVIVG00038743001	SubName- Full=Chromosome chr2 scaffold_97, whole genome shotgun sequence; (322 aa)				•					0.438
	GSVIVG00015908001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (324 aa)				•					0.429
	GSVIVG00029446001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (190 aa)	•								0.424
	GSVIVG00022834001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (353 aa)				•					0.424
	GSVIVG00003851001	SubName- Full=Chromosome chr8 scaffold_150, whole genome shotgun sequence; (518 aa)				•					0.416
	GSVIVG00037644001	SubName- Full=Chromosome chr9 scaffold_90, whole genome shotgun sequence; (395 aa)				•					0.413
	GSVIVG00025052001	SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (226 aa)				•					0.413

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	328
pfam03881	287	pfam03881, Fructosamin_kin, Fructosamine kinase	1e-131
COG3001	286	COG3001, COG3001, Uncharacterized protein conserve	2e-81
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	1e-08
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	1e-04
COG3173	321	COG3173, COG3173, Predicted aminoglycoside phospho	0.003

>gnl|CDD|146488 pfam03881, Fructosamin_kin, Fructosamine kinase

 Score =  374 bits (962), Expect = e-131
 Identities = 125/288 (43%), Positives = 167/288 (57%), Gaps = 7/288 (2%)

Query: 40  IREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGA 99
            ++     G    IT+  PVGGG IN A R       +FVK N     +MFE EA GL  
Sbjct: 5   AQQLSEQLGTPFTITEREPVGGGDINQAYRISDGEQRYFVKLNEKEALAMFEAEAEGLEL 64

Query: 100 MYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKGF 158
           +  T+TIR PR    G+     S++++E++  G  + G+    G++LA++H+ G   K F
Sbjct: 65  LARTQTIRVPRVIAWGST-RDHSFLVLEYLPLGPDNTGSAYQLGQQLAKLHQWG-EQKQF 122

Query: 159 GFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPL 218
           GFD DNTIGSTPQ N+W S+W  F+AE R+G+QL+LA ++      +    RL++ +A L
Sbjct: 123 GFDFDNTIGSTPQPNRWQSSWATFFAEQRIGWQLQLAKEKGLS---FGDIDRLVERVADL 179

Query: 219 FEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNS 277
             G   +P LLHGDLWSGN +   +GEPVI DPACYYG  E +  M+    GF   FY+ 
Sbjct: 180 LAGHQPQPSLLHGDLWSGNAAFTADGEPVIFDPACYYGDRECDLAMTELFGGFPPDFYDG 239

Query: 278 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 325
           Y  V P   G+E R+ LY LYH LNH NLFG GY S A  +ID  L  
Sbjct: 240 YQSVYPLDEGYEDRKPLYQLYHLLNHLNLFGGGYLSQAQQLIDKLLAE 287

This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function. Length = 287

>gnl|CDD|225547 COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]

 Score =  248 bits (635), Expect = 2e-81
 Identities = 109/281 (38%), Positives = 145/281 (51%), Gaps = 20/281 (7%)

Query: 52  HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 111
            I +   V GG IN A R       FFVK N+    SMF  EA GL  +  + TI  P+ 
Sbjct: 17  EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKV 76

Query: 112 FKVGALPTGGSYIIMEFIEFGSSRG-NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 170
             VGA     SY+++E++  G     +  + G++LA +H+ G     FG D DN IG+TP
Sbjct: 77  IAVGA-SRDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWG-GQAQFGLDFDNYIGTTP 134

Query: 171 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH------RLMKNLAPLFEGVNV 224
           Q N W   W  F+AE R+G+QL+LA          +RG        +++ +  L      
Sbjct: 135 QPNTWQRRWATFFAEQRIGWQLQLAR---------ERGLTFGDIDAIVEKIQELLADHQP 185

Query: 225 EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMP 283
           +P LLHGDLWSGN +  K+G PVI DPACY+G  E +  M     GF   FY+ Y  V P
Sbjct: 186 QPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPEFYDGYQSVSP 244

Query: 284 KQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
              G+ +R+ +Y LYH LNH NLFG  Y   A   ID  L 
Sbjct: 245 LPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285

Length = 286

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 44/261 (16%), Positives = 73/261 (27%), Gaps = 44/261 (16%)

Query: 55  KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRP 111
            + P+ GG  N     GT  G + +K       +     E   L   A      I  PR 
Sbjct: 1   TLRPLSGGASNRTYLVGTGDGRYVLKLAPPAEAAEELRRELALLRHLA---AAGIPVPRV 57

Query: 112 FKVGALPTGGS--YIIMEFIEFGSSRGNQSV----------FGKKLAEMHKAGKSSKGFG 159
              G    G    +++ME +  G                    + LA +H     +    
Sbjct: 58  LAGGTDGGGLGLPFLLMEGLP-GEVLTRPLDPAERGALLEALARLLARLHSVPPEALPLA 116

Query: 160 FDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPL 218
                               ++   +      +L  A      + +++R    +  L P 
Sbjct: 117 R--------------RLRRRLKLLRQLAAALRRLVAAELLDRLAELWERLLAALLALLPA 162

Query: 219 FEGVNVEPCLLHGDLWSGNISSDKNGEPV-ILDPA-CYYGHNEAEFGM---SWCAGFGGS 273
                    L+HGDL  GN+  D  G    ++D      G    +      S     G  
Sbjct: 163 LP-----LVLVHGDLHPGNLLVDPGGRVTGVIDFEDAGLGDPAYDLASLLRSLGEELGAE 217

Query: 274 FYNSYFEVMPKQPGFEKRRDL 294
              +Y       P   + R+L
Sbjct: 218 LLAAYLAAYGAAPDPARLREL 238

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 56  ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKV 114
           I  + GG  N     GT    + +K N S    +  E E   L  +   + +  P+    
Sbjct: 3   IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAIL-QLLARKGLPVPKVLAS 61

Query: 115 GALPTGGSYIIMEFIEFGSSRGNQSVF---------GKKLAEMHKA 151
           G    G SY++ME+IE G +    S            + LA++H+ 
Sbjct: 62  GESD-GWSYLLMEWIE-GETLDEVSEEEKEDIAEQLAELLAKLHQL 105

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|225714 COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only]

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 46/240 (19%), Positives = 74/240 (30%), Gaps = 47/240 (19%)

Query: 34  ALSDDPIREWILSEGKATHITKICPVG-GGCINLASRYGTDAGSFFVKTNRSIGPS-MFE 91
           AL    +  ++ S+        I     GG  N   R G     + ++      P     
Sbjct: 7   ALDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAH 66

Query: 92  GEALGLGAMYETRTIRA------PRPFKVGALPTGGS----YIIMEFIE---------FG 132
            E        E R I A      P P +   L   G     + +ME++E           
Sbjct: 67  DEKR------EYRVIAALLDVDVPVP-RAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPE 119

Query: 133 SSRGNQSV--FGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY 190
           S     ++      LAE+H    +        +   G   Q+ +W   +           
Sbjct: 120 SLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGR--QLARWDDEYRRA-------- 169

Query: 191 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 250
             K  L   G   +  R  + ++   P + G    P L+HGD   GN+  D      +LD
Sbjct: 170 --KKELG--GRIPLADRLIKWLEANRPPWAG---PPVLVHGDYRPGNLIIDPGRPTGVLD 222

Length = 321

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	328
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	100.0
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	100.0
KOG3021	313	consensus Predicted kinase [General function predi	100.0
PRK10593	297	hypothetical protein; Provisional	100.0
PRK05231	319	homoserine kinase; Provisional	99.97
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	99.97
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	99.96
COG2334	331	Putative homoserine kinase type II (protein kinase	99.95
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	99.93
PRK11768	325	serine/threonine protein kinase; Provisional	99.92
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	99.9
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	99.9
PLN02876	822	acyl-CoA dehydrogenase	99.9
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	99.9
PF01636	239	APH: Phosphotransferase enzyme family This family	99.89
PRK09550	401	mtnK methylthioribose kinase; Reviewed	99.89
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	99.89
PLN02756	418	S-methyl-5-thioribose kinase	99.88
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	99.88
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	99.88
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.87
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	99.85
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	99.84
PRK06149	972	hypothetical protein; Provisional	99.84
PRK06148	1013	hypothetical protein; Provisional	99.84
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	99.83
PRK12396	409	5-methylribose kinase; Reviewed	99.82
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.82
PLN02236	344	choline kinase	99.79
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	99.76
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	99.76
PTZ00296	442	choline kinase; Provisional	99.68
PTZ00384	383	choline kinase; Provisional	99.61
PRK10271	188	thiK thiamine kinase; Provisional	99.6
TIGR02905	313	spore_yutH spore coat protein YutH. Members of thi	99.59
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	99.59
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	99.58
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.56
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	99.45
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	99.43
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	99.4
COG4857	408	Predicted kinase [General function prediction only	99.35
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	99.27
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.25
PRK14879	211	serine/threonine protein kinase; Provisional	99.25
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	99.21
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.17
KOG4720	391	consensus Ethanolamine kinase [Lipid transport and	99.12
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.12
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.1
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.08
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.93
PRK09902	216	hypothetical protein; Provisional	98.91
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.9
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.87
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.84
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.83
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.79
KOG3087	229	consensus Serine/threonine protein kinase [General	98.73
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.7
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.68
smart00090	237	RIO RIO-like kinase.	98.68
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	98.65
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.65
TIGR02457	528	TreS_Cterm trehalose synthase-fused probable malto	98.63
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.61
KOG2686	366	consensus Choline kinase [Cell wall/membrane/envel	98.59
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.55
PRK12274	218	serine/threonine protein kinase; Provisional	98.54
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.52
KOG2268	465	consensus Serine/threonine protein kinase [Signal	98.48
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.46
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.4
KOG0605	550	consensus NDR and related serine/threonine kinases	98.39
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.32
PRK14705	1224	glycogen branching enzyme; Provisional	98.3
COG2187	337	Uncharacterized protein conserved in bacteria [Fun	98.24
PRK09188	365	serine/threonine protein kinase; Provisional	98.21
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.2
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.17
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.15
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.12
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.09
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.08
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.07
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.05
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.05
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.05
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.04
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.04
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.04
COG3570	274	StrB Streptomycin 6-kinase [Defense mechanisms]	98.03
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.03
KOG1187	361	consensus Serine/threonine protein kinase [Signal	98.03
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.02
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.01
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.0
KOG0610	459	consensus Putative serine/threonine protein kinase	98.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.99
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	97.99
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	97.99
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	97.99
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	97.98
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	97.98
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	97.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	97.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	97.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	97.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	97.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	97.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	97.94
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	97.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	97.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	97.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	97.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	97.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	97.93
KOG2270	520	consensus Serine/threonine protein kinase involved	97.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	97.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	97.92
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	97.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.92
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	97.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	97.91
KOG0598	357	consensus Ribosomal protein S6 kinase and related	97.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	97.9
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	97.9
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	97.89
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	97.89
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	97.89
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	97.89
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	97.88
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	97.87
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	97.87
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.86
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	97.86
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	97.86
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	97.86
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	97.86
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	97.86
PTZ00267	478	NIMA-related protein kinase; Provisional	97.85
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	97.85
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	97.84
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	97.84
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.84
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	97.83
KOG0595	429	consensus Serine/threonine-protein kinase involved	97.82
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	97.81
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	97.81
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	97.81
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	97.81
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	97.81
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.79
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	97.79
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	97.79
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	97.78
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	97.78
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.78
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	97.77
PRK10345	210	hypothetical protein; Provisional	97.76
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	97.76
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	97.76
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	97.76
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	97.76
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	97.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	97.75
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	97.74
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	97.74
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	97.73
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	97.72
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	97.72
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	97.72
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	97.71
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	97.71
KOG0581	364	consensus Mitogen-activated protein kinase kinase	97.71
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	97.7
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	97.7
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	97.7
KOG0583	370	consensus Serine/threonine protein kinase [Signal	97.68
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	97.68
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	97.68
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	97.68
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	97.68
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	97.68
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	97.67
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	97.67
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	97.67
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.67
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	97.67
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	97.66
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	97.66
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.65
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	97.65
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	97.65
KOG0192	362	consensus Tyrosine kinase specific for activated (	97.65
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.65
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	97.64
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.64
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	97.64
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	97.64
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	97.64
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.63
PHA03212	391	serine/threonine kinase US3; Provisional	97.63
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	97.63
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	97.62
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.62
PHA03209	357	serine/threonine kinase US3; Provisional	97.62
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	97.62
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	97.61
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	97.6
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.6
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	97.6
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	97.6
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	97.6
PHA03211	461	serine/threonine kinase US3; Provisional	97.59
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	97.59
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	97.59
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.58
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	97.57
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.57
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	97.57
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	97.57
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	97.57
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	97.56
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	97.56
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.55
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	97.55
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.55
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	97.55
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	97.54
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	97.53
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	97.52
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	97.52
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	97.52
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.52
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	97.52
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	97.52
PHA03207	392	serine/threonine kinase US3; Provisional	97.52
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	97.51
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	97.51
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.51
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	97.51
KOG0575	592	consensus Polo-like serine/threonine protein kinas	97.51
KOG3653	534	consensus Transforming growth factor beta/activin	97.51
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	97.51
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.51
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	97.51
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.5
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	97.5
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.5
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	97.49
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	97.49
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	97.49
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	97.49
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.48
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	97.48
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	97.48
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	97.48
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	97.48
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.47
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	97.47
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.47
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	97.46
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	97.46
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.46
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	97.46
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	97.46
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	97.46
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	97.46
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	97.46
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.46
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	97.46
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	97.46
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	97.45
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	97.45
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	97.45
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	97.44
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.44
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	97.44
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	97.43
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	97.43
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	97.43
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	97.42
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	97.42
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	97.42
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	97.42
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.41
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	97.41
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	97.41
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	97.41
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.4
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	97.4
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	97.39
KOG0198	313	consensus MEKK and related serine/threonine protei	97.39
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	97.39
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.38
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	97.38
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	97.37
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	97.37
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	97.37
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	97.36
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.36
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.36
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	97.36
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	97.36
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	97.35
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.35
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	97.35
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	97.35
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.33
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	97.33
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	97.33
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	97.32
PTZ00284	467	protein kinase; Provisional	97.32
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	97.31
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	97.31
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	97.3
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	97.3
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	97.29
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.27
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	97.27
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	97.27
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	97.26
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	97.26
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.26
PTZ00283	496	serine/threonine protein kinase; Provisional	97.26
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	97.25
PTZ00024	335	cyclin-dependent protein kinase; Provisional	97.25
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	97.25
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	97.24
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	97.24
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.24
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	97.24
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.23
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	97.23
PTZ00036	440	glycogen synthase kinase; Provisional	97.23
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	97.22
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.22
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.21
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	97.2
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.2
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	97.2
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	97.2
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	97.2
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	97.19
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	97.19
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	97.19
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	97.19
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	97.18
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	97.18
TIGR02569	272	TIGR02569_actnb conserved hypothetical protein TIG	97.18
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	97.17
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	97.17
PHA02988	283	hypothetical protein; Provisional	97.17
PTZ00266	1021	NIMA-related protein kinase; Provisional	97.17
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	97.16
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	97.16
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	97.15
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	97.14
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	97.14
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.14
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.11
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	97.11
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.11
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	97.1
PLN00009	294	cyclin-dependent kinase A; Provisional	97.1
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	97.06
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	97.05
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	97.05
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	97.04
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	97.02
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.01
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	97.01
KOG0578	550	consensus p21-activated serine/threonine protein k	96.99
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	96.99
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	96.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	96.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	96.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	96.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	96.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	96.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	96.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	96.9
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	96.9
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	96.89
KOG0607	463	consensus MAP kinase-interacting kinase and relate	96.88
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	96.84
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	96.84
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	96.83
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	96.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	96.82
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	96.8
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.79
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	96.78
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	96.76
PHA03210	501	serine/threonine kinase US3; Provisional	96.76
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	96.74
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	96.69
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	96.68
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	96.67
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	96.65
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	96.65
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	96.65
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	96.64
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	96.64
PHA02882	294	putative serine/threonine kinase; Provisional	96.6
KOG2052	513	consensus Activin A type IB receptor, serine/threo	96.58
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	96.57
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.54
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	96.53
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	96.5
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	96.5
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.49
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	96.47
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.47
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	96.45
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	96.42
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	96.34
KOG0611	668	consensus Predicted serine/threonine protein kinas	96.34
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	96.32
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.28
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	96.27
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	96.22
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	96.11
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.04
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	95.97
KOG0586	596	consensus Serine/threonine protein kinase [General	95.95
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	95.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	95.88
COG3281	438	Ble Uncharacterized protein, probably involved in	95.84
KOG0582	516	consensus Ste20-like serine/threonine protein kina	95.78
KOG2269	531	consensus Serine/threonine protein kinase [Signal	95.69
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	95.45
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	95.42
KOG1152	772	consensus Signal transduction serine/threonine kin	95.31
KOG0694	694	consensus Serine/threonine protein kinase [Signal	95.05
KOG4721	904	consensus Serine/threonine protein kinase, contain	94.88
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	94.83
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	94.38
cd05124	238	AFK Actin-Fragmin Kinase (AFK); catalytic domain.	93.98
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	93.95
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	93.91
KOG0589	426	consensus Serine/threonine protein kinase [General	93.64
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	93.51
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	93.44
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	93.23
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	92.91
PF09192	275	Act-Frag_cataly: Actin-fragmin kinase, catalytic;	92.84
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	92.53
PF10009	385	DUF2252: Uncharacterized protein conserved in bact	92.38
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	91.92
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	91.67
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	91.36
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	91.1
PF13575	370	DUF4135: Domain of unknown function (DUF4135)	90.77
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	90.48
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	90.32
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	90.15
KOG0584	632	consensus Serine/threonine protein kinase [General	90.12
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	89.54
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	89.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	89.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	88.45
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	88.09
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	87.77
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	87.75
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	87.49
PLN00181	793	protein SPA1-RELATED; Provisional	87.34
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	86.69
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	85.93
PHA00451	362	protein kinase	85.15
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	84.39
KOG1290	590	consensus Serine/threonine protein kinase [Signal	83.36
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	83.25
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	81.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	81.31
KOG0695	593	consensus Serine/threonine protein kinase [Signal	81.11
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	80.74

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=100.00  E-value=9.8e-54  Score=385.75  Aligned_cols=283  Identities=46%  Similarity=0.796  Sum_probs=213.3

Q ss_pred             hhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           37 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        37 ~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      ++.|.+.|.+. +.+.+|+++++++||..|.+|+++++.++||||+++.....+++.|++.|+.|++..++.||+|+..+
T Consensus         2 w~~i~~~~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G   81 (288)
T PF03881_consen    2 WQAIEQQISEQLGADFKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWG   81 (288)
T ss_dssp             HHHHHHHHHHHHTS-----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEE
T ss_pred             hHHHHHHHHHHhCCCCceeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            56788899887 66678999999999999999999988889999999865678899999999999887789999999998


Q ss_pred             ccCCCceEEEEeeecCCCC-CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294          116 ALPTGGSYIIMEFIEFGSS-RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL  194 (328)
Q Consensus       116 ~~~~~~~~~v~e~l~G~~~-~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~  194 (328)
                      .. .+..|+||||++.+.. ...++++|+.||+||+... .+.|||+.++++|.+||.|+|.++|.+||.++|+.++++.
T Consensus        82 ~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~~-~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~  159 (288)
T PF03881_consen   82 EY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWSP-AGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLEL  159 (288)
T ss_dssp             E--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHH
T ss_pred             ee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhcC-CCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            76 4567999999999843 4789999999999999322 2469999999999999999999999999998899999988


Q ss_pred             HHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 020294          195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS  273 (328)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~-~~~~~~~~  273 (328)
                      +.+.+...   ..++++.+++...+..+..+|+|||||||+||++++.++.++|||+.+++||+|+|||++ .+++|+++
T Consensus       160 ~~~~~~~~---~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~yygh~E~DLam~~lfggf~~~  236 (288)
T PF03881_consen  160 AREKGGLD---AELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPACYYGHREVDLAMTRLFGGFPDE  236 (288)
T ss_dssp             HHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---EEE-CHHHHHHHCCCSTTHHH
T ss_pred             HHhhCCch---hHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccccccCchHhhhhhhhhhCCCCHH
Confidence            87765432   345566666666676556789999999999999999998899999999999999999987 56889999


Q ss_pred             hHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020294          274 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  324 (328)
Q Consensus       274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~  324 (328)
                      |+++|.+..|++++|++|..+|+||++|+|.++||++|+.+++++|+++++
T Consensus       237 f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~  287 (288)
T PF03881_consen  237 FYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS  287 (288)
T ss_dssp             HHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999986

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=4.5e-52  Score=351.34  Aligned_cols=281  Identities=39%  Similarity=0.681  Sum_probs=254.3

Q ss_pred             hhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           37 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        37 ~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      ++.|.+.|.+. |.+ +|...+++.||..|..|+|.++..+||||.+......++.+|+..|+.|++...+.||+|+..+
T Consensus         2 w~~i~~qlse~~g~~-~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G   80 (286)
T COG3001           2 WQAISQQLSEQLGEG-EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVG   80 (286)
T ss_pred             hHHHHHHHHHHhCch-hhhcccccCCccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEec
Confidence            45667777776 766 8999999999999999999998889999999876667899999999999998779999999998


Q ss_pred             ccCCCceEEEEeeecCCCCC-ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294          116 ALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL  194 (328)
Q Consensus       116 ~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~  194 (328)
                      .. .+..|+||||++-++.. ..+..+|+.||+||++... ..||++.++.+|.+||.|.|.++|..||.++|+.++++.
T Consensus        81 ~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~-~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlql  158 (286)
T COG3001          81 AS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQ-AQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQL  158 (286)
T ss_pred             CC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCc-cccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHH
Confidence            76 57889999999998775 5689999999999999985 479999999999999999999999999999999999998


Q ss_pred             HHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 020294          195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS  273 (328)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~-~~~~~~~~  273 (328)
                      +.+++.+..   .++.+++.+++++.++++.|+|+|||||++|..+..+| ++++|+.|.+||++.||||+ .+++|..+
T Consensus       159 ar~rg~~f~---did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~e  234 (286)
T COG3001         159 ARERGLTFG---DIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPE  234 (286)
T ss_pred             HHHhCCCcc---CHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-CeeeccccccCCcccceehhhhhcCCcHH
Confidence            888766432   24666777788888888889999999999999999998 99999999999999999998 57899999


Q ss_pred             hHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020294          274 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  324 (328)
Q Consensus       274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~  324 (328)
                      |+++|.++.|++++|++|..+|.||++++|.+.||+.|.+.+..+|++.|+
T Consensus       235 fy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~  285 (286)
T COG3001         235 FYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS  285 (286)
T ss_pred             HHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999875

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=100.00  E-value=2.1e-52  Score=349.24  Aligned_cols=288  Identities=48%  Similarity=0.859  Sum_probs=259.5

Q ss_pred             HHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           41 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        41 ~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      +++|.....-..+..+-.+++|+.+..--.+|+.|++|||.++...+++++.|.+.|+++.+...+.||+|+.+...+.|
T Consensus         2 ee~l~ael~~~~vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~G   81 (313)
T KOG3021|consen    2 EELLRAELGLNNVRALGSVGGGCISDGRHYDTDAGKVFVKVNRSIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGG   81 (313)
T ss_pred             hHHHHHhcCcceeeeecCCCCceeccccccccCCccEEEEeccccchHHHhhHHHHHHHHHhcCceecCCceeeEecCCC
Confidence            45666662223777788889999998888899999999999998888999999999999999888999999999887788


Q ss_pred             ceEEEEeeecCCCCCccHHHHHHHHHHHH------------hcCCCC-----------CCCCCCCCCcccccccCCCCcc
Q 020294          121 GSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSS-----------KGFGFDVDNTIGSTPQINKWTS  177 (328)
Q Consensus       121 ~~~~v~e~l~G~~~~~~~~~lg~~La~lH------------~~~~~~-----------~~~g~~~~~~~g~~~~~~~~~~  177 (328)
                      ..++|||+++.+.++.++..+|++||.||            ....-.           ..|||...+++|.+||.|+|.+
T Consensus        82 gs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~e  161 (313)
T KOG3021|consen   82 GSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQE  161 (313)
T ss_pred             ceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchh
Confidence            99999999999999999999999999999            222111           1289999999999999999999


Q ss_pred             cHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCC
Q 020294          178 NWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGH  257 (328)
Q Consensus       178 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~  257 (328)
                      +|.+||...|+.++++.+.+...|.+..+++..+..+++.+|.+....|+|+|||||+|||--|+.++++|+|+.++|||
T Consensus       162 dW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~~ePiIfDPasfYgh  241 (313)
T KOG3021|consen  162 DWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGAGEPIIFDPASFYGH  241 (313)
T ss_pred             hHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCCCCceEeCchhhcCC
Confidence            99999998899999999988888888888999888889999998778899999999999999888888999999999999


Q ss_pred             chhhhhhhhh-cCCChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhcC
Q 020294          258 NEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV  328 (328)
Q Consensus       258 p~~DLa~~~~-~~~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~~~~~  328 (328)
                      +++|+++.++ +||+++|+++|++..|..+++++|+.+|+||++|+||+.||++|+++...|++.|+.+++.
T Consensus       242 ~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHwNhFGs~YRs~sl~i~~n~lk~~~~  313 (313)
T KOG3021|consen  242 SEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHWNHFGSGYRSSSLDIMRNLLKNCYN  313 (313)
T ss_pred             cHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHHHHhcC
Confidence            9999999864 8899999999999999999999999999999999999999999999999999999998763

>PRK10593 hypothetical protein; Provisional

Probab=100.00  E-value=9.3e-41  Score=304.89  Aligned_cols=277  Identities=18%  Similarity=0.190  Sum_probs=219.2

Q ss_pred             hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294           38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGA  116 (328)
Q Consensus        38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~  116 (328)
                      +.|++-+.+. .+.++.+++++++|.++.+|++++.++++|+|+.+.. ....+..|++.|++|++.+++|||+|+..+.
T Consensus         2 ~~~~~~~~~~-~~~~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~   80 (297)
T PRK10593          2 EQLRAELSHL-LGEKLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMT   80 (297)
T ss_pred             hHHHHHHHHH-hchhhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence            3466666666 4558999999999999999999998889999998653 4568999999999999876799999998765


Q ss_pred             cC--CCceEEEEeeecCCCCC----------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH
Q 020294          117 LP--TGGSYIIMEFIEFGSSR----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA  184 (328)
Q Consensus       117 ~~--~~~~~~v~e~l~G~~~~----------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~  184 (328)
                      ..  .+..++|||+|+|.+..          ....++++.|++||+...    +|+     .|.  ..+.|..+|..|+.
T Consensus        81 ~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~----~g~-----~g~--~~~~~~~~w~~f~~  149 (297)
T PRK10593         81 HEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS----RGC-----VGA--VDSTQENLWPSWYQ  149 (297)
T ss_pred             cCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh----hhc-----ccC--CCCcccccHHHHHH
Confidence            32  47799999999998641          123556799999999754    443     222  24557778888886


Q ss_pred             HhhhHHHH---HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CC-eEEEccc-cccCCc
Q 020294          185 EHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GE-PVILDPA-CYYGHN  258 (328)
Q Consensus       185 ~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~-~~iID~~-~~~G~p  258 (328)
                       .|+..+.   +.+..........+.+.++.+.+++.+..++.+++|||||||++||+++++ +. ++||||. +.+||+
T Consensus       150 -~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~r  228 (297)
T PRK10593        150 -QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPR  228 (297)
T ss_pred             -HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCH
Confidence             4665433   222222222233344555566677777655567899999999999999864 33 7999997 789999


Q ss_pred             hhhhhhhhhcCCChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhc
Q 020294          259 EAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK  327 (328)
Q Consensus       259 ~~DLa~~~~~~~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~~~~  327 (328)
                      ++||+++.+++|.+.|+++|++..|++++|++|..+|.||++|+|.++||.=|......++++.|.||.
T Consensus       229 E~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~~~~~~~~~~~~~~~~~~  297 (297)
T PRK10593        229 EYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRFDRRRFDLAAKSLLPWLA  297 (297)
T ss_pred             HHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCccchhhHHHHHHHhccccC
Confidence            999998877899999999999999999999999999999999999999999999999999999998873

>PRK05231 homoserine kinase; Provisional

Probab=99.97  E-value=1.4e-30  Score=240.65  Aligned_cols=245  Identities=16%  Similarity=0.194  Sum_probs=171.3

Q ss_pred             hhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCc
Q 020294           29 TFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~V  108 (328)
                      |||||.++.++++++|+.++.+ ++.+++++.+|..|.+|+|++++|+||||+.+......+..|.+++++|++. ++||
T Consensus         1 m~vyt~ls~~~l~~~l~~y~~~-~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~-glpv   78 (319)
T PRK05231          1 MAVYTDVSDDELAAFLAPYDLG-ELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAAR-GVPV   78 (319)
T ss_pred             CCccccCCHHHHHHHHHhcCCc-hhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHC-CCCC
Confidence            8999999999999999877775 8999999999999999999999999999998633345566788999999986 7999


Q ss_pred             ccceeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccH
Q 020294          109 PRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW  179 (328)
Q Consensus       109 P~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w  179 (328)
                      |+|+......     .+..+++++|++|....    ..++++|+.||+||.+..+   |..+..+..       .+ ..|
T Consensus        79 P~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~~~~~~-------~~-~~~  147 (319)
T PRK05231         79 PAPVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLERPNLR-------GL-AWW  147 (319)
T ss_pred             CcceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCccCCCCC-------Ch-HHH
Confidence            9999764321     46789999999998653    3578999999999998863   432211111       00 112


Q ss_pred             HHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhh-hccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCC
Q 020294          180 IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP-LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  257 (328)
Q Consensus       180 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~  257 (328)
                      .+.+.  ++.+.+....    ...+.+.++++.+.+.. ...  ..+.++||||++++||++++++..+|||| .++.|+
T Consensus       148 ~~~~~--~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~--~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~  219 (319)
T PRK05231        148 RELAP--RLLPFLADEQ----AALLEAELAAQLAFLASAAWP--ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDK  219 (319)
T ss_pred             HHHHH--HHhhccChhH----HHHHHHHHHHHHHhhhccccc--cCCcccCCCCCCCCcEEEECCceEEEEecccccCCc
Confidence            22221  1111110000    00111223333333221 111  25678999999999999987766799999 578999


Q ss_pred             chhhhhhh---hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHH
Q 020294          258 NEAEFGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDL  294 (328)
Q Consensus       258 p~~DLa~~---~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~l  294 (328)
                      +.+|||.+   ||.    .+.    .+|++||++.+|+++...+.+..
T Consensus       220 ~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~  267 (319)
T PRK05231        220 LLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPV  267 (319)
T ss_pred             hHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence            99999975   342    233    57999999999998654443333

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=99.97  E-value=3.3e-29  Score=230.40  Aligned_cols=246  Identities=15%  Similarity=0.193  Sum_probs=176.4

Q ss_pred             hhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCC
Q 020294           29 TFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~  107 (328)
                      |+|||.++.++|.+++.+++++ .+.+++++++|..|.+|++++++++||||+.... ..+.+..|.+++++|++. ++|
T Consensus         1 ~~~~~~~~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~-g~p   78 (307)
T TIGR00938         1 MAVYTSVSDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAAR-GLP   78 (307)
T ss_pred             CCccccCCHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence            8999999999999999988775 7889999999999999999999999999998653 345677889999999886 799


Q ss_pred             cccceeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCccc
Q 020294          108 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN  178 (328)
Q Consensus       108 VP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~  178 (328)
                      ||+++......     ++..+++++|++|....    ...+++|+.||+||.....   |..+...        ..+...
T Consensus        79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---~~~~~~~--------~~~~~~  147 (307)
T TIGR00938        79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAH---FPENRKN--------SLRLEA  147 (307)
T ss_pred             CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc---CCCCCCC--------CCChHH
Confidence            99999865421     46789999999998653    3468999999999998853   3322110        012234


Q ss_pred             HHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCC
Q 020294          179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  257 (328)
Q Consensus       179 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~  257 (328)
                      |...+... . ....     ....+..+.+++.++.+...... ..+.++||||+|++||++++++..+|||| .+++|+
T Consensus       148 w~~~~~~~-~-~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~  219 (307)
T TIGR00938       148 WHILAEKC-F-EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA  219 (307)
T ss_pred             HHHHHHhh-h-hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence            55443221 0 0000     01111122233333333322222 35689999999999999998876799999 478999


Q ss_pred             chhhhhhh---hh----cCCC----hhhHHHHhhhCCCCCCHHHHHHHH
Q 020294          258 NEAEFGMS---WC----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY  295 (328)
Q Consensus       258 p~~DLa~~---~~----~~~~----~~f~~~Y~~~~pl~~~~~~r~~ly  295 (328)
                      +++||+.+   ++    ..+.    ..|+++|++.+|+++...+.+...
T Consensus       220 ~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~  268 (307)
T TIGR00938       220 RAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL  268 (307)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            99999975   23    2243    689999999999987655544444

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=99.96  E-value=2.5e-27  Score=216.70  Aligned_cols=236  Identities=15%  Similarity=0.180  Sum_probs=167.6

Q ss_pred             hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc
Q 020294           38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL  117 (328)
Q Consensus        38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~  117 (328)
                      +++++++.+++.+ ++.+++++.+|..|.+|++.+++++||||+.+......+..|++++++|++. ++|||+++.....
T Consensus         2 ~~l~~~l~~y~~~-~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~-g~~vp~~i~~~~g   79 (296)
T cd05153           2 EELASFLADYDLG-ELLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAER-GLPVPRPIADRDG   79 (296)
T ss_pred             HHHHHHHHHcCCC-chhheecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHC-CCCCCccccCCCC
Confidence            6899999988765 7889999999999999999999899999998754456678899999999986 6999999986432


Q ss_pred             C-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhh
Q 020294          118 P-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRL  188 (328)
Q Consensus       118 ~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l  188 (328)
                      .     ++..+.|++|++|..+.    ....++|+.||+||.....   +....+.         .-...|...... +.
T Consensus        80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~~~~~---------~~~~~~~~~~~~-~~  146 (296)
T cd05153          80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPGERNN---------LRGLAWIRELGK-DL  146 (296)
T ss_pred             cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCccCCC---------cCCcHHHHHHHH-Hh
Confidence            1     46789999999998763    3578999999999999853   2211100         011233322111 01


Q ss_pred             HHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhhhhhh--
Q 020294          189 GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS--  265 (328)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~p~~DLa~~--  265 (328)
                      ..        .........+++.++.+...... ..+.++||||+|++||++++++.++|||| .+++|++++||+.+  
T Consensus       147 ~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~~Dla~~~~  217 (296)
T cd05153         147 LP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFLYDLAITLN  217 (296)
T ss_pred             cc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEEeCCceEEEeehhhhcCchHHHHHHHHHH
Confidence            00        01222233444444444432222 35678999999999999998877799999 57899999999965  


Q ss_pred             -hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHHHHH
Q 020294          266 -WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYML  297 (328)
Q Consensus       266 -~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l  297 (328)
                       ++.    +++    +.|+++|++..|++++..+.+..+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~~  258 (296)
T cd05153         218 DWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIMLR  258 (296)
T ss_pred             HHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence             221    133    57999999999998665555554443

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=99.95  E-value=2.4e-26  Score=210.78  Aligned_cols=242  Identities=18%  Similarity=0.196  Sum_probs=172.7

Q ss_pred             hhhhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCC
Q 020294           27 RRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRT  105 (328)
Q Consensus        27 ~~~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~  105 (328)
                      ..|++++.+..+++...|..+++| ...+...+.+ ..|.||++++++|+||||++++. ....+..|.+++++|++. +
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~~~g-~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~-~   79 (331)
T COG2334           3 DSMAVFTPLTSDEAAAALEAYHYG-LDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAER-G   79 (331)
T ss_pred             cccccccCcChHHHHHHHHhcCcC-cccccccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHc-C
Confidence            358999999999999999998777 4556777765 89999999999999999999874 667788999999999997 6


Q ss_pred             CCcccceeccccC-----CC--ceEEEEeeecCCCCC-----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCC
Q 020294          106 IRAPRPFKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN  173 (328)
Q Consensus       106 v~VP~~~~~~~~~-----~~--~~~~v~e~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~  173 (328)
                      ++||.|+...+..     .+  +++.|++|++|..+.     .+++.+|+.||+||.+...   |.+..++..+.    .
T Consensus        80 i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~---f~~~~p~~~~~----~  152 (331)
T COG2334          80 IPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG---FPFERPNALRR----L  152 (331)
T ss_pred             CCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---CCccCCCcccc----c
Confidence            8888885443221     46  899999999998764     3579999999999999974   54444433321    1


Q ss_pred             CCcccHHHHHHHhhhHHHHHHHHhhCCChHH----HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEE
Q 020294          174 KWTSNWIEFYAEHRLGYQLKLALDQYGDSTI----YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVI  248 (328)
Q Consensus       174 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~i  248 (328)
                          .|.- .. .+....    .....+..+    ...++++.+.++..++.  ....+||||++++||++++++ .+++
T Consensus       153 ----~w~~-~~-~~~~~~----~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~~~~NVl~d~~~~~~g~  220 (331)
T COG2334         153 ----EWDI-LE-PRALLR----LDLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDLHPDNVLFDDDTDVSGF  220 (331)
T ss_pred             ----chhh-hc-chhhhh----hcccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCCCccceeEcCCCCeeeE
Confidence                2221 00 000000    000011212    23344444444444442  224499999999999999887 4899


Q ss_pred             Ecc-ccccCCchhhhhhhh---hcCC------ChhhHHHHhhhCCCCCCHHH
Q 020294          249 LDP-ACYYGHNEAEFGMSW---CAGF------GGSFYNSYFEVMPKQPGFEK  290 (328)
Q Consensus       249 ID~-~~~~G~p~~DLa~~~---~~~~------~~~f~~~Y~~~~pl~~~~~~  290 (328)
                      ||| +|++|+..+||+++.   ....      -.+|++||++++|+++...+
T Consensus       221 iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~  272 (331)
T COG2334         221 IDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELE  272 (331)
T ss_pred             EEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHH
Confidence            998 689999999999864   2221      15799999999999864433

>TIGR02721 ycfN_thiK thiamine kinase

Probab=99.93  E-value=8.8e-24  Score=189.38  Aligned_cols=231  Identities=16%  Similarity=0.124  Sum_probs=150.4

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +.++.+|.+|.+|++++++++||+|+++....   ...+.|.++++.+++. ++ +|+++..+.     .++||+|++|.
T Consensus         1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~   73 (256)
T TIGR02721         1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGE   73 (256)
T ss_pred             CCcCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCc
Confidence            35678999999999998878999999865322   2357899999999986 44 899998763     47999999998


Q ss_pred             CCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          133 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       133 ~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      ++.       .....+++.|+++|+.+..    +.+.               +..     .++..++.........++  
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~----~~~~---------------~~~-----~~~~~~~~~l~~~~~~~~--  127 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRF----GYPL---------------SLK-----ARIAHYWLQIDPARRTPE--  127 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCC----CCCC---------------CHH-----HHHHHHHHhcccccCChH--
Confidence            753       2468999999999998752    1110               000     011111111111111222  


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhhc-C--CChhhHHHHhhh
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCA-G--FGGSFYNSYFEV  281 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~~-~--~~~~f~~~Y~~~  281 (328)
                        +.++.+.+.......+.++++||||++++||++++++ .+||||+ +.+|||.+|||.++.. +  ..+.|+++|.+.
T Consensus       128 --~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~  204 (256)
T TIGR02721       128 --WLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQR  204 (256)
T ss_pred             --HHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence              2233333222111113578999999999999998876 7899995 7899999999987532 1  225799999988


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHhc--------cCcHHHHHHHHHHH
Q 020294          282 MPKQ--PGFEKRRDLYMLYHYLNHYNLFG--------SGYRSSALSIIDDY  322 (328)
Q Consensus       282 ~pl~--~~~~~r~~ly~l~~~l~~~~~~~--------~~y~~~~~~~~~~~  322 (328)
                      .+..  +.+.+++..|..+..+....+++        ..|...+..+.+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~a~~~~~~~  255 (256)
T TIGR02721       205 RRIYSISVLWRQVKAWQPWVDYMAALWFELRWQQTGDPQFLELAQELRHRL  255 (256)
T ss_pred             hCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence            6543  35556666655444444444443        35555555555443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1.7e-23  Score=193.67  Aligned_cols=248  Identities=16%  Similarity=0.142  Sum_probs=163.5

Q ss_pred             hhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCc
Q 020294           32 MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        32 ~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~V  108 (328)
                      |..++.+.|.+.+...|+. ....+..++ |..|.||+|+++++ +||+|++++.  ....+..|++++.+|++. ++||
T Consensus         8 ~~~l~p~~~~~a~~~~g~~-~~~~~~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv   84 (325)
T PRK11768          8 FQTLTPDLILDALESLGLR-VDGRLLALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPV   84 (325)
T ss_pred             CCCCChHHHHHHHHHcCCC-CccceEeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCC
Confidence            5568999999999888653 223456664 68899999999766 7999998743  356678999999999986 6898


Q ss_pred             ccceeccc-cC---CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHH
Q 020294          109 PRPFKVGA-LP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI  180 (328)
Q Consensus       109 P~~~~~~~-~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~  180 (328)
                      |.|+..+. ..   ++..+.+++|++|+...    ...+++|+.||+||..+..   +++...         ..|  ++.
T Consensus        85 ~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~r---------~~~--~~~  150 (325)
T PRK11768         85 VAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEHR---------PTL--DLQ  150 (325)
T ss_pred             CCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCCC---------CcC--CHH
Confidence            88753322 10   46789999999998753    4578999999999998873   222110         011  111


Q ss_pred             HHHHHhhhHHHHHHHHhhCCChH----HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cccc
Q 020294          181 EFYAEHRLGYQLKLALDQYGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY  255 (328)
Q Consensus       181 ~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~  255 (328)
                      .+...  ....+.  .....+.+    ..+.++++.+.+...+...+.+.++||||+|++||+++ + .++|||| +++.
T Consensus       151 ~~~~~--~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~  224 (325)
T PRK11768        151 EYGIE--PRDWLL--ASDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D-GPHFVDLDDARM  224 (325)
T ss_pred             HHHHH--HHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence            11100  000110  01111221    22334444443333333213577899999999999995 4 4789999 5789


Q ss_pred             CCchhhhhhhhhcCC------ChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 020294          256 GHNEAEFGMSWCAGF------GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLN  302 (328)
Q Consensus       256 G~p~~DLa~~~~~~~------~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~  302 (328)
                      |++++||+++.....      -..|++||++.+|+++.....+..+.....+.
T Consensus       225 g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~~  277 (325)
T PRK11768        225 GPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLIH  277 (325)
T ss_pred             CCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            999999998643211      24799999999999876666666655444433

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=99.90  E-value=1.7e-22  Score=179.61  Aligned_cols=218  Identities=14%  Similarity=0.112  Sum_probs=142.2

Q ss_pred             eeeeCCccc-ceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCI-NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~-n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .++|..|++ |.+|+++.+++++|+|+.++.....+.+|++++++|++.  ++||+++..+.. .+..++||++++|.++
T Consensus         3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~l   79 (244)
T cd05150           3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVPA   79 (244)
T ss_pred             ceecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCccH
Confidence            467777764 899999987789999999764445678999999999985  899999988764 3678999999999875


Q ss_pred             C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHH-Hh-hCCChH
Q 020294          135 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA-LD-QYGDST  203 (328)
Q Consensus       135 ~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~-~~-~~~~~~  203 (328)
                      .         ....++|+.+++||+.+...  +.+.     +       +..++.+.     .....+.. .. ...+..
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~~-----~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~  140 (244)
T cd05150          80 AALWEELEPERLVDALAEALRRLHALPVAD--CPFD-----R-------RLDRRLAE-----ARARVENGLVDEDDFDDE  140 (244)
T ss_pred             hHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCcc-----h-------hHHHHHHH-----HHHHHhcCCcChhhCcHh
Confidence            3         23688999999999986521  1110     0       00000000     00000000 00 000100


Q ss_pred             H-HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh-h----c---CCChh
Q 020294          204 I-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW-C----A---GFGGS  273 (328)
Q Consensus       204 ~-~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~-~----~---~~~~~  273 (328)
                      . ....+++.+.+...... ..+++|||||++++|||+++++..+||||+ +.+|||.+||+.+. .    .   +..+.
T Consensus       141 ~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~  219 (244)
T cd05150         141 RRGWSAEELYAELEATRPA-EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAAR  219 (244)
T ss_pred             hcCCCHHHHHHHHHhhCCC-cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHH
Confidence            0 00122233333322222 357899999999999999987778999995 67999999999753 1    1   12357


Q ss_pred             hHHHHhhhCCCCCCHHHHHHHHHHHHH
Q 020294          274 FYNSYFEVMPKQPGFEKRRDLYMLYHY  300 (328)
Q Consensus       274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~  300 (328)
                      |+++|.... .  + .+|+.+|+++..
T Consensus       220 f~~~Y~~~~-~--~-~~~~~~~~~~~~  242 (244)
T cd05150         220 FLDRYGIDA-P--D-PEKLAYYRLLDE  242 (244)
T ss_pred             HHHHcCCCC-C--C-HHHHHHHHHHhh
Confidence            899997641 1  2 578888887643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=99.90  E-value=1.1e-22  Score=178.66  Aligned_cols=190  Identities=15%  Similarity=0.204  Sum_probs=128.2

Q ss_pred             eeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.+++++|.+|.+|+.  .++++|+|+++.. ....++.|+++++.++.. ++|||+|+..+.. .+...+||+|++|.
T Consensus         4 ~~~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~   79 (226)
T TIGR02172         4 SDWTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGK   79 (226)
T ss_pred             hHheeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCc
Confidence            45678999999999984  3568999999763 345578999999999975 7999999999754 34567899999997


Q ss_pred             CC-----C-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCC
Q 020294          133 SS-----R-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG  200 (328)
Q Consensus       133 ~~-----~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~  200 (328)
                      +.     .       .....+|+.+++||+.+.+.  .++         +       ...     .++...++...  ..
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l---------~-------~~~-----~~~~~~l~~~~--~~  134 (226)
T TIGR02172        80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STF---------Q-------SYK-----EKIRKFIEEKD--FV  134 (226)
T ss_pred             cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcH---------H-------HHH-----HHHHHHHHhcc--CC
Confidence            41     1       13577888888899876531  111         0       000     11211111110  11


Q ss_pred             ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCC----Chhh
Q 020294          201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGF----GGSF  274 (328)
Q Consensus       201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~----~~~f  274 (328)
                      +....+.+.+.++.    +   +.++++||||||++||++++++ ++||||+ +++|||.+||+.++. ..+    ...|
T Consensus       135 ~~~~~~~l~~~l~~----~---~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~  206 (226)
T TIGR02172       135 PKDYKEKARAFIKE----V---PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQA  206 (226)
T ss_pred             CHHHHHHHHHHHHh----C---CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHH
Confidence            21222333322221    2   3456889999999999998877 8999995 789999999998753 233    3456


Q ss_pred             HHHHhh
Q 020294          275 YNSYFE  280 (328)
Q Consensus       275 ~~~Y~~  280 (328)
                      +..|+.
T Consensus       207 ~~~y~~  212 (226)
T TIGR02172       207 IFHMNA  212 (226)
T ss_pred             HHhcCH
Confidence            777764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PLN02876 acyl-CoA dehydrogenase

Probab=99.90  E-value=3.1e-22  Score=206.00  Aligned_cols=255  Identities=16%  Similarity=0.199  Sum_probs=162.3

Q ss_pred             cCChhHHHHHHHhcCCCc--c--eeeeeeeCCcccceeEEEEeCC----ccEEEEecCCC----CcchHHHHHHHHHHHH
Q 020294           34 ALSDDPIREWILSEGKAT--H--ITKICPVGGGCINLASRYGTDA----GSFFVKTNRSI----GPSMFEGEALGLGAMY  101 (328)
Q Consensus        34 ~~~~~~i~~~l~~~~~~~--~--i~~v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~----~~~~~~~E~~~l~~L~  101 (328)
                      .++.+.+.+||.+...+.  .  ..+++++++|.+|.+|+++..+    .+||||..+..    ....+.+|+++++.|.
T Consensus        17 ~~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~   96 (822)
T PLN02876         17 RFDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG   96 (822)
T ss_pred             cCCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence            478899999998763322  2  3579999999999999998765    37999998652    2356889999999998


Q ss_pred             hcCCCCcccceeccccC--CCceEEEEeeecCCCCC-------------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q 020294          102 ETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI  166 (328)
Q Consensus       102 ~~~~v~VP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~  166 (328)
                      +..++|||+++..+.+.  .|.+|+||||++|....             ....++++.|++||+.....  .|+...   
T Consensus        97 ~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~--~gl~~~---  171 (822)
T PLN02876         97 EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDA--IGLGKY---  171 (822)
T ss_pred             hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchh--cChhhc---
Confidence            65679999999886542  37899999999997531             13467999999999987632  232110   


Q ss_pred             cccccCCCCcccHHHHHHHhhhHHHHHHHHhhCC--ChHHHHHHHHHHHHhhhhccCCC---CCCceeccCCCCCCeeec
Q 020294          167 GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG--DSTIYQRGHRLMKNLAPLFEGVN---VEPCLLHGDLWSGNISSD  241 (328)
Q Consensus       167 g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~---~~~~LiHgDl~~~Nil~~  241 (328)
                      |. |      .+|..    ..+..+.+.......  .......++++.+.+....+...   .+++||||||+++|||++
T Consensus       172 g~-~------~~~~~----~~l~~w~~~~~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~  240 (822)
T PLN02876        172 GR-R------DNYCK----RQVERWAKQYLASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFH  240 (822)
T ss_pred             CC-C------CchHH----HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEc
Confidence            10 0      11110    111111111111000  00001223333444433233211   157899999999999998


Q ss_pred             CC--CCeEEEccc-cccCCchhhhhhh---hh-c-------------------CCC--hhhHHHHhhhCCCCCCHHHHHH
Q 020294          242 KN--GEPVILDPA-CYYGHNEAEFGMS---WC-A-------------------GFG--GSFYNSYFEVMPKQPGFEKRRD  293 (328)
Q Consensus       242 ~~--~~~~iID~~-~~~G~p~~DLa~~---~~-~-------------------~~~--~~f~~~Y~~~~pl~~~~~~r~~  293 (328)
                      ++  +..+||||+ +.+|||..||+++   ++ .                   |++  +++++.|++..+.+.. ...+.
T Consensus       241 ~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~-~~~~~  319 (822)
T PLN02876        241 PTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWP-AANWK  319 (822)
T ss_pred             CCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCC-CcccH
Confidence            63  346899995 7899999999965   21 1                   121  4699999998664311 12356


Q ss_pred             HHHHHHHHHHHH
Q 020294          294 LYMLYHYLNHYN  305 (328)
Q Consensus       294 ly~l~~~l~~~~  305 (328)
                      +|+.+..+....
T Consensus       320 ~~~~~~~~r~a~  331 (822)
T PLN02876        320 FYVAFSLFRGAS  331 (822)
T ss_pred             HHHHHHHHHHHH
Confidence            666665554444

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=99.90  E-value=3.5e-22  Score=176.81  Aligned_cols=215  Identities=17%  Similarity=0.131  Sum_probs=135.8

Q ss_pred             eeeeC-CcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCC--CceEEEEeeecC
Q 020294           56 ICPVG-GGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~-~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~--~~~~~v~e~l~G  131 (328)
                      |+++. ||..|.+|++.   +.||+|+++.. ....++.|.+++++|++..+++||+++..+...+  +..+++|+|++|
T Consensus         2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G   78 (235)
T cd05155           2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG   78 (235)
T ss_pred             ceeccCCCcccceEEcC---CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence            46664 77889999983   47999998753 3456889999999999766799999998776432  356999999999


Q ss_pred             CCCC--------ccHHHHHHHHHHHHhcCCCCC-CCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294          132 GSSR--------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  202 (328)
Q Consensus       132 ~~~~--------~~~~~lg~~La~lH~~~~~~~-~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  202 (328)
                      .++.        ...+++|+.|++||+.+.+.. ..+..  ...     .......|...... .+    .... ...+.
T Consensus        79 ~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~-~~----~~~~-~~l~~  145 (235)
T cd05155          79 ETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRH--NFL-----RGGDLAVRDAETRE-AI----EALE-GVIDV  145 (235)
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCc--ccc-----CCCChhHhhHHHHH-HH----HHcc-cccCh
Confidence            8763        235789999999999886421 11100  000     00001122211100 00    0000 00111


Q ss_pred             HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh--c-CCChhhHHHH
Q 020294          203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC--A-GFGGSFYNSY  278 (328)
Q Consensus       203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~--~-~~~~~f~~~Y  278 (328)
                         ..+.++.+...+...  ..+++|||||||++|||+++++.++||||+ +.+|||++||+.+++  . +..+.|++.|
T Consensus       146 ---~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y  220 (235)
T cd05155         146 ---DAARALWEAALRAPW--WGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAAL  220 (235)
T ss_pred             ---HHHHHHHHHHhcccc--cCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHc
Confidence               112222222222222  257899999999999999877767999995 789999999998753  1 1235789999


Q ss_pred             hhhCCCCCCHHHHHHHH
Q 020294          279 FEVMPKQPGFEKRRDLY  295 (328)
Q Consensus       279 ~~~~pl~~~~~~r~~ly  295 (328)
                      + +.+.   -..|..+|
T Consensus       221 ~-~~~~---~~~~~~~~  233 (235)
T cd05155         221 G-VDDA---TWARGRGW  233 (235)
T ss_pred             C-CCHH---HHHHhccc
Confidence            8 4332   24555554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=99.89  E-value=1.5e-22  Score=177.63  Aligned_cols=220  Identities=25%  Similarity=0.369  Sum_probs=132.4

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeeecC
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEF  131 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l~G  131 (328)
                      +|+++++|..|.+|++++++++||+|.++.. ....+..|++++++|++. ++|||+++..+...  .+..+++|+|++|
T Consensus         1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             -EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CCccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEecc
Confidence            4789999999999999999999999999764 346688999999999987 57999999854322  3567999999999


Q ss_pred             CCCC---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH--hhhHHHHHHHHhhCC
Q 020294          132 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQYG  200 (328)
Q Consensus       132 ~~~~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~~  200 (328)
                      ..+.         ....++|+.|++||+...+.  .+.                ..+..+...  ..+............
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (239)
T PF01636_consen   80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPF--SPF----------------ADWPEWRLEFLRQLESWTARLRASEL  141 (239)
T ss_dssp             EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTC--CCH----------------THHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccccccccccccchhhhhhcccccccc--ccc----------------ccccccccccccccccccccccchhh
Confidence            8642         24589999999999996321  110                011111100  001111000000001


Q ss_pred             ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec-CCCCeEEEccc-cccCCchhhhhhhh-h--cCCChhhH
Q 020294          201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDPA-CYYGHNEAEFGMSW-C--AGFGGSFY  275 (328)
Q Consensus       201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~-~~~~~~iID~~-~~~G~p~~DLa~~~-~--~~~~~~f~  275 (328)
                      ........+++.+.+.+.+.. ..+.++||||++++|||++ +++..+||||+ +++|+|.+|++.+. .  ......+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~~~~~~~~  220 (239)
T PF01636_consen  142 FDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGEDQDPEFR  220 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTTHCHHHHH
T ss_pred             hhhhHHHHHHHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhcccCCHHHH
Confidence            111112222245555444432 3688999999999999999 33434899995 68999999999764 2  12334455


Q ss_pred             HHHhhhCCCCCCHHHHHHHH
Q 020294          276 NSYFEVMPKQPGFEKRRDLY  295 (328)
Q Consensus       276 ~~Y~~~~pl~~~~~~r~~ly  295 (328)
                      ++|.+......++ +++..|
T Consensus       221 ~~~~~~~~~~~~~-~~~~~~  239 (239)
T PF01636_consen  221 RAYLEAYGRAAGY-ARLRPY  239 (239)
T ss_dssp             HHHHHHHTSSCHH-HHHHHH
T ss_pred             HHHHHHhcCCCCH-HHhCCC
Confidence            5554443322333 444443

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=99.89  E-value=3.1e-21  Score=181.08  Aligned_cols=224  Identities=18%  Similarity=0.237  Sum_probs=144.1

Q ss_pred             hhhhhcCChhHHHHHHHhc-CC--CcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHH
Q 020294           29 TFAMAALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGE   93 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~~~-~~--~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E   93 (328)
                      |+.|..|+.+.+.+|+... +.  .....++++++||..|.+|+|+..+|  ++|||++++.          ..++...|
T Consensus         1 ~~~y~~l~~~~v~~yl~~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~E   80 (401)
T PRK09550          1 MSGYETLTEEDAVEYAALKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIE   80 (401)
T ss_pred             CCCCeeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHH
Confidence            4557789999999999444 42  23456789999999999999999876  8999997631          23456789


Q ss_pred             HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCC
Q 020294           94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV  162 (328)
Q Consensus        94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~  162 (328)
                      ++.|+.+++..+..||+|+.++.   +..++||||+++...           +..++++|+.||++|.....   +....
T Consensus        81 ae~L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd---~~~~~  154 (401)
T PRK09550         81 AEALKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSD---FGLSS  154 (401)
T ss_pred             HHHHHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccch---hhcCh
Confidence            99999998877788999999985   578999999998541           13579999999999965532   11110


Q ss_pred             CCccccc-ccCCCCccc------HHH-HHHH--hhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccCCCCCCceecc
Q 020294          163 DNTIGST-PQINKWTSN------WIE-FYAE--HRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHG  231 (328)
Q Consensus       163 ~~~~g~~-~~~~~~~~~------w~~-~~~~--~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHg  231 (328)
                      ....... ...|.....      +.+ ++..  +++.+.+...... ..+.++...+.+    +...+.  ..+.+||||
T Consensus       155 ~~~~~~~~~f~N~~l~~ite~lvft~P~~~~~~n~~~p~l~~~~~~l~~d~~L~~~~~~----L~~~~~--~~~~~l~Hg  228 (401)
T PRK09550        155 EEKKALVAKFTNPELCKITEDLVFTDPYFDHETNNFEPELEPEVEELRADKELKLEVAK----LKHKFL--TKAEALLHG  228 (401)
T ss_pred             hhhhhHHhhcCCHHHhhhhHhhccccchhhhhhccCChhhHHHHHHHHhCHHHHHHHHH----HHHHHh--cCCCceeec
Confidence            0000000 000100000      000 1110  1222333222111 113333333333    333333  246789999


Q ss_pred             CCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          232 DLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       232 Dl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      |||++||++.+++ +.||||+ +.+|+|.+||+.+
T Consensus       229 Dl~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~  262 (401)
T PRK09550        229 DLHTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTF  262 (401)
T ss_pred             cCCcccEEeeCCC-cEEEeccccccCChHHHHHHH
Confidence            9999999997764 8999996 7899999999965

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=99.89  E-value=1.6e-21  Score=177.08  Aligned_cols=233  Identities=19%  Similarity=0.238  Sum_probs=151.5

Q ss_pred             cCChhHHHHHHHhcCCC-cceeeeeeeCCcccceeEEEEeCCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCc
Q 020294           34 ALSDDPIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        34 ~~~~~~i~~~l~~~~~~-~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~V  108 (328)
                      .++.+.+..++..+.++ .....++.+.+|++|.+|++..++.+||||.++..    ......+|+++++.+... .+||
T Consensus         7 ~~~~~~l~~~l~~~ip~~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~   85 (321)
T COG3173           7 ALDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDV-DVPV   85 (321)
T ss_pred             cCCHHHHHHHHHhhCcCcCCCceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHHHHHHhcCC-CCCC
Confidence            35778899999888433 35566777789999999999988779999944321    234456788888888775 6888


Q ss_pred             ccceeccccCC-CceEEEEeeecCCCCC----------ccHH-HHHHHHHHHHhcCCCC-CCCCCCCCCcccccccCCCC
Q 020294          109 PRPFKVGALPT-GGSYIIMEFIEFGSSR----------GNQS-VFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKW  175 (328)
Q Consensus       109 P~~~~~~~~~~-~~~~~v~e~l~G~~~~----------~~~~-~lg~~La~lH~~~~~~-~~~g~~~~~~~g~~~~~~~~  175 (328)
                      |+++....... |.+|.||+|++|+...          .... ++++.|+.||+++... ..+|.+. .+.+      ..
T Consensus        86 p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~-~~~~------rq  158 (321)
T COG3173          86 PRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPN-AYRG------RQ  158 (321)
T ss_pred             cccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccC-cccc------ch
Confidence            88888765544 7899999999996421          2334 8999999999999521 1122111 1111      11


Q ss_pred             cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cc
Q 020294          176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY  254 (328)
Q Consensus       176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~  254 (328)
                      ...|..-+.     ...   .+...+..   .++++...+...-...+.+++++||||+++|+|+++++.++||||+ +.
T Consensus       159 l~~~~~~~~-----~~~---~~~~~~~p---~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         159 LARWDDEYR-----RAK---KELGGRIP---LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             hhHHHHHHH-----HHH---HhccCCCc---hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence            122322221     000   11111111   2222222222221111468899999999999999998888999996 67


Q ss_pred             cCCchhhhhhh-hh--c------CCC------hhhHHHHhhhCCCC
Q 020294          255 YGHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ  285 (328)
Q Consensus       255 ~G~p~~DLa~~-~~--~------~~~------~~f~~~Y~~~~pl~  285 (328)
                      +|||..||+.+ |.  .      .+.      ..+++.|.+...+.
T Consensus       228 lGDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~  273 (321)
T COG3173         228 LGDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA  273 (321)
T ss_pred             cCCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence            99999999987 63  1      122      35788888887765

>PLN02756 S-methyl-5-thioribose kinase

Probab=99.88  E-value=3e-21  Score=180.32  Aligned_cols=214  Identities=19%  Similarity=0.180  Sum_probs=141.1

Q ss_pred             hhhcCChhHHHHHHHhc------CCC-cceeeeeeeCCcccceeEEEEeCCccEEEEecCCC----------CcchHHHH
Q 020294           31 AMAALSDDPIREWILSE------GKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----------GPSMFEGE   93 (328)
Q Consensus        31 ~~~~~~~~~i~~~l~~~------~~~-~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E   93 (328)
                      .|..++.+.+.+|+.+.      ..+ ..+..++++++|..|.+|+|+++++++|||.+++.          ...+-..|
T Consensus         5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~E   84 (418)
T PLN02756          5 EFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFE   84 (418)
T ss_pred             ccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHH
Confidence            46678999999999886      221 25678999999999999999988789999999731          23444567


Q ss_pred             HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC--CC----------ccHHHHHHHHHHHHhcCCCCCCCCCC
Q 020294           94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS--SR----------GNQSVFGKKLAEMHKAGKSSKGFGFD  161 (328)
Q Consensus        94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~--~~----------~~~~~lg~~La~lH~~~~~~~~~g~~  161 (328)
                      .+.|+.+.+..+++||+||.++.   +..+++|||+++.+  ++          ...+.+|..+++..-....   ++..
T Consensus        85 a~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd---~~~~  158 (418)
T PLN02756         85 ATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSL---LYHD  158 (418)
T ss_pred             HHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcch---hccC
Confidence            88888887776789999999995   57899999999843  21          3468899999987333221   1111


Q ss_pred             CCC-------cc-------------cccccCCCCcccHHHHHHHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhcc
Q 020294          162 VDN-------TI-------------GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFE  220 (328)
Q Consensus       162 ~~~-------~~-------------g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~  220 (328)
                      ...       +.             -.-|..+.....        ...+.+....+. ..+++++..+.++    +..+-
T Consensus       159 ~~~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~--------~~~p~l~~~~~~l~~d~~L~~~v~~L----k~~f~  226 (418)
T PLN02756        159 TTEHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNR--------WTSPYLDRDAEAVREDNILKLEIAEL----KSMFC  226 (418)
T ss_pred             hhhhhHHHHHhcCCHHHHHHHHhheeccccccchhcC--------CCCcchHHHHHHHhcCHHHHHHHHHH----HHHHH
Confidence            000       00             000110000001        111222222111 1244444444443    33333


Q ss_pred             CCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       221 ~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                        ...++|+|||||+|||++.+++ +.+||++ +++||+++||+++
T Consensus       227 --~~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~  269 (418)
T PLN02756        227 --ERAQALVHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAF  269 (418)
T ss_pred             --hcccceeecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHH
Confidence              2578999999999999998776 8999986 7899999999985

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=99.88  E-value=1.7e-20  Score=172.68  Aligned_cols=223  Identities=16%  Similarity=0.145  Sum_probs=141.3

Q ss_pred             cceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEEeeecCCCCC---
Q 020294           64 INLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR---  135 (328)
Q Consensus        64 ~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~e~l~G~~~~---  135 (328)
                      .+.+|+|++++|.||||..+.. ...+..|.+++++|++. +++||+++......     ++..+.|++|++|....   
T Consensus         9 ~~~v~~v~t~~g~~~LK~~~~~-~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~   86 (313)
T TIGR02906         9 LRNVYKVETDSGNKCLKKINYP-PERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNN   86 (313)
T ss_pred             CccEEEEEeCCCCeEEEEcCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCC
Confidence            3459999999999999997532 34466789999999987 67999999875431     46789999999998753   


Q ss_pred             -ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHh--hhHHHHHHHHhhC-CC---hHHHHHH
Q 020294          136 -GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH--RLGYQLKLALDQY-GD---STIYQRG  208 (328)
Q Consensus       136 -~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~--~l~~~~~~~~~~~-~~---~~~~~~~  208 (328)
                       ....++|+.||+||.....   |..+..    ..+. . ....|.+.+...  .+....+.+.... .+   ..+.+.+
T Consensus        87 ~~~~~~~g~~La~lH~~~~~---~~~~~~----~~~~-~-~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  157 (313)
T TIGR02906        87 PIDLKKAAKGLALFHHASKG---YVPPDG----SKIR-S-KLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEV  157 (313)
T ss_pred             HHHHHHHHHHHHHHHHhCCC---CCCCCc----chhh-c-cccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence             3579999999999999863   211110    0011 0 112354433321  2222222211111 11   0011111


Q ss_pred             HH-------HHHHhh-----hhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh---hh---cC
Q 020294          209 HR-------LMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS---WC---AG  269 (328)
Q Consensus       209 ~~-------~~~~l~-----~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~---~~---~~  269 (328)
                      +.       .++.+.     .+......+.++||||++++||++++ +.++||||+ +++|++++||+.+   ++   ..
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~  236 (313)
T TIGR02906       158 DYFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGV  236 (313)
T ss_pred             HHHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccC
Confidence            11       111111     11111134679999999999999987 457999995 7899999999964   23   23


Q ss_pred             CC----hhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          270 FG----GSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       270 ~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      ++    ..|+++|++..|+++...+.+..+.++
T Consensus       237 ~d~~~~~~~l~gY~~~~~L~~~e~~~l~~~l~~  269 (313)
T TIGR02906       237 WDLEKAKEIIEAYSSINPLSKEEKEVLYIDLAF  269 (313)
T ss_pred             CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence            54    479999999999987655555544433

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=99.88  E-value=5.8e-21  Score=172.59  Aligned_cols=212  Identities=14%  Similarity=0.064  Sum_probs=137.2

Q ss_pred             cCCCcceeeeeeeCCcccceeEEEEeC-CccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           47 EGKATHITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        47 ~~~~~~i~~v~~i~~G~~n~~y~v~~~-~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .|+...+.++...+.|..|.+|++... +++||+|+++.. ....+++|+++|+.|+++.++|||+++..+     ..++
T Consensus         7 ~~~~~~~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~-----~~~~   81 (276)
T cd05152           7 HGLTLKPETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT-----PELI   81 (276)
T ss_pred             cCCccCCCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec-----CceE
Confidence            366666777888888889999999764 448999999753 245578999999999987788999876543     3477


Q ss_pred             EEeeecCCCCC--------------------ccHHHHHHHHHHHHhcCCCC-CCCCCCCCCcccccccCCCCcccHHHHH
Q 020294          125 IMEFIEFGSSR--------------------GNQSVFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWTSNWIEFY  183 (328)
Q Consensus       125 v~e~l~G~~~~--------------------~~~~~lg~~La~lH~~~~~~-~~~g~~~~~~~g~~~~~~~~~~~w~~~~  183 (328)
                      +|++++|.+..                    ..+.++|+.|++||+.+... ...|++..           ..+...+.+
T Consensus        82 ~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~-----------~~~~~~~~~  150 (276)
T cd05152          82 AYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVE-----------TPEEVRQTM  150 (276)
T ss_pred             EEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCC-----------CHHHHHHHH
Confidence            88888887531                    13578999999999987632 11121100           011111111


Q ss_pred             HHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccc-cccCCchh
Q 020294          184 AEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYGHNEA  260 (328)
Q Consensus       184 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~-~~~G~p~~  260 (328)
                      . ..+.    ..... .....+   ++++.+.++..... +.+++||||||+++||+++++ +..+||||+ +++|||.+
T Consensus       151 ~-~~l~----~~~~~~~~~~~l---~~~~~~~L~~~~~~-~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~  221 (276)
T cd05152         151 A-DRMD----RVKEEFGVSEAL---WNRWQAWLDDDSYW-PRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPAR  221 (276)
T ss_pred             H-HHHH----HHHHhcCCCHHH---HHHHHHHHhhcCCC-CCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHH
Confidence            1 1122    11111 112222   22233323211011 357899999999999999874 446899995 68999999


Q ss_pred             hhhhhh-hc--CCChhhHHHHhhhCC
Q 020294          261 EFGMSW-CA--GFGGSFYNSYFEVMP  283 (328)
Q Consensus       261 DLa~~~-~~--~~~~~f~~~Y~~~~p  283 (328)
                      ||+.++ +.  ...+.|+++|.+..+
T Consensus       222 Dla~~~~~~~~~~~~~~~~~Y~~~~g  247 (276)
T cd05152         222 DFVLHYRIFGEAGLERLIDAYEAAGG  247 (276)
T ss_pred             HHHHHHHhcChHHHHHHHHHHHHcCC
Confidence            999763 22  234789999998765

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.87  E-value=1.3e-20  Score=164.39  Aligned_cols=191  Identities=18%  Similarity=0.222  Sum_probs=128.2

Q ss_pred             eeeeeCCcccceeEEEEeCC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e  127 (328)
                      .++++++|..|.+|++++.+ .+||+|+.+..    ....+..|+++++.+++. ++++|+++......  .+..++|||
T Consensus         2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence            46889999999999999987 59999998753    245688999999999986 78999999887542  246799999


Q ss_pred             eecCCCCCc--------------cHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHH
Q 020294          128 FIEFGSSRG--------------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK  193 (328)
Q Consensus       128 ~l~G~~~~~--------------~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~  193 (328)
                      |++|..+..              .+.++++.|++||......  .+....   +.      . ..+.   . ..+..+.+
T Consensus        81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--~~~~~~---~~------~-~~~~---~-~~~~~~~~  144 (223)
T cd05154          81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA--VGLGDL---GR------P-GGYL---E-RQVARWRR  144 (223)
T ss_pred             EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh--cCCccc---CC------C-CchH---H-HHHHHHHH
Confidence            999986521              1478999999999988632  221100   00      0 0000   0 11222211


Q ss_pred             HHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC--CCCeEEEccc-cccCCchhhhhhh
Q 020294          194 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~--~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      ........  ....++++.+.+.+.+.. ..+.++||||++++||++++  ++.++||||+ +.+|+|++||+.+
T Consensus       145 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~  216 (223)
T cd05154         145 QYDASRTD--EPPAMERLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL  216 (223)
T ss_pred             HHHhhccc--ccHHHHHHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence            11111000  011223333333333333 25789999999999999988  5557999995 6899999999975

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=99.85  E-value=3.2e-20  Score=164.02  Aligned_cols=194  Identities=16%  Similarity=0.182  Sum_probs=121.3

Q ss_pred             eeeeeCCcccceeEEEEeCC---ccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGTDA---GSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~---~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      +++++.||.+|.+|+|++.+   ++||+|++.....  ...+.|..+++.+++. ++ +|+++....     .+++|||+
T Consensus         2 ~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i   74 (235)
T cd05157           2 TFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFI   74 (235)
T ss_pred             eEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEee
Confidence            58899999999999999873   5899999875322  2345799999999886 45 899986542     25899999


Q ss_pred             cCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh--hCC
Q 020294          130 EFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD--QYG  200 (328)
Q Consensus       130 ~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~--~~~  200 (328)
                      +|.++.       ....++|+.|+++|......   .....    ..+....| +....+...  +.........  ...
T Consensus        75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~---~~~~~----~~~~~~~~-~~i~~~~~~--~~~~~~~~~~~~~~~  144 (235)
T cd05157          75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPE---AISSP----GTPKPILW-PTIRKWINL--VPTEFKKPEKFQKKT  144 (235)
T ss_pred             CCCcCCHHHccChHHHHHHHHHHHHHhcccccc---ccccc----CCCCCcHH-HHHHHHHHH--hHHhhccccchhhhh
Confidence            998753       24688999999999988632   11000    00000001 111111110  1100000000  000


Q ss_pred             ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC-CCCeEEEccc-cccCCchhhhhhh
Q 020294          201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~-~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      .....+.+.+.++.+...+.....+.++||||++++|||+++ ++.+.+|||+ +++|+|.+|||..
T Consensus       145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~  211 (235)
T cd05157         145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANH  211 (235)
T ss_pred             ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHH
Confidence            000122233333333333333235679999999999999997 4668999995 8899999999975

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=99.84  E-value=5.7e-20  Score=169.19  Aligned_cols=238  Identities=13%  Similarity=0.094  Sum_probs=145.3

Q ss_pred             HHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccce-eccccC-
Q 020294           41 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALP-  118 (328)
Q Consensus        41 ~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~-~~~~~~-  118 (328)
                      ++++.++++  ++.+++++    .|.||+|.|++|.|+||.... ..+.+.....++++|+++ |+++|.++ ...... 
T Consensus         2 ~~vl~~Y~l--~v~~i~~~----~~~v~~v~T~~G~~~Lk~~~~-~~~~l~~~~~~~~~L~~~-G~~~~~~~~~t~~G~~   73 (309)
T TIGR02904         2 EAVLEHYGL--QPEEMEQV----TGKLFKVYTDQGVFALKKLYA-DRNTIESFVSQIQVLSEK-GFSRIVPVYPTKDGSY   73 (309)
T ss_pred             hhhHhhcCC--Cceeeecc----cCcEEEEEeCCCCEEEEEecc-chHhHHHHHHHHHHHHHc-CCCcCCceeecCCCCe
Confidence            456666644  57776443    568999999999999999873 344456678888999887 78766666 332221 


Q ss_pred             ----CCceEEEEeeecCCCC---CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHH
Q 020294          119 ----TGGSYIIMEFIEFGSS---RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQ  191 (328)
Q Consensus       119 ----~~~~~~v~e~l~G~~~---~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~  191 (328)
                          .+.++++|+|++|...   ..++.++|+.||+||.++.......  .....  .+ ...+...|.....  .+...
T Consensus        74 ~~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~~~~~--~~-~~~~~~~~~~~~~--~l~~~  146 (309)
T TIGR02904        74 YLFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--EEELK--KH-YERTLSRWENIPE--GLEEF  146 (309)
T ss_pred             eeEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--HhHHH--hH-HHHHHHHHHHHHH--HHHHH
Confidence                4668999999999643   1457999999999999997421111  00000  00 0011122221110  11222


Q ss_pred             HHHHHh-hCCCh----------HHHHHHHHHHHHhhhhc----cCCCCCCceeccCCCCCCeeecCCCCeEEEccc-ccc
Q 020294          192 LKLALD-QYGDS----------TIYQRGHRLMKNLAPLF----EGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYY  255 (328)
Q Consensus       192 ~~~~~~-~~~~~----------~~~~~~~~~~~~l~~~l----~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~  255 (328)
                      .+.... ...++          ...+.++.+++.+..+.    .....+.+|||||++++|+|+++++..+||||+ +++
T Consensus       147 ~~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       147 IVEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            111111 01110          11122333333333221    111357799999999999999888888999995 789


Q ss_pred             CCchhhhhhhhh-----cCCC----hhhHHHHhhhCCCCCCHHHHHH
Q 020294          256 GHNEAEFGMSWC-----AGFG----GSFYNSYFEVMPKQPGFEKRRD  293 (328)
Q Consensus       256 G~p~~DLa~~~~-----~~~~----~~f~~~Y~~~~pl~~~~~~r~~  293 (328)
                      |+|+.||+....     .++.    .+++++|++..|+++...+.+.
T Consensus       227 d~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~  273 (309)
T TIGR02904       227 ASPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLT  273 (309)
T ss_pred             CCcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence            999999995421     2343    5899999999999865333333

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK06149 hypothetical protein; Provisional

Probab=99.84  E-value=2.6e-19  Score=186.85  Aligned_cols=236  Identities=15%  Similarity=0.162  Sum_probs=157.1

Q ss_pred             CChhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCcccc
Q 020294           35 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPRP  111 (328)
Q Consensus        35 ~~~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~v~VP~~  111 (328)
                      ++.+++++++.+. |+.   ..+.+++ |..|.+|+|++++++||||+.++. ....+..|.+++++|++. .++|||+|
T Consensus        17 ls~~~~~~ll~~~ygl~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~p   92 (972)
T PRK06149         17 VSEAQAERILAEHYGLS---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVV   92 (972)
T ss_pred             CCHHHHHHHHHHhcCCc---eEEEecC-CcCcceEEEEecCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCcee
Confidence            7899999999655 553   2356674 677999999999899999999742 345678899999999986 37999999


Q ss_pred             eeccccC---------CCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294          112 FKVGALP---------TGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  175 (328)
Q Consensus       112 ~~~~~~~---------~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~  175 (328)
                      +......         .+..+.+++|++|.+..       ...+++|+.+|+||.+..+   |.  .+...    ....|
T Consensus        93 i~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~---f~--hp~~~----r~~~W  163 (972)
T PRK06149         93 IPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALAD---FD--HPGLD----RTLQW  163 (972)
T ss_pred             eECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcC---CC--CCCCC----Ccccc
Confidence            9764331         13457899999997652       3478999999999999974   32  22110    01123


Q ss_pred             cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH----HHhhhhccCCCCCCceeccCCCCCCeeecCCC-----Ce
Q 020294          176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM----KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EP  246 (328)
Q Consensus       176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-----~~  246 (328)
                      ...        +.....+.......+++.++.+++.+    +++.....  ..+..+||+|++.+||+++++.     ..
T Consensus       164 dl~--------~~~~~~~~ll~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~  233 (972)
T PRK06149        164 DLR--------HAGPVVAHLLSHITDPAQRARIAEATRDAARRLQPLAP--ALPLQAVHLDITDDNVVGSRDADGRWQPD  233 (972)
T ss_pred             chh--------hhHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccccCCCCCcccEEEcCCCCCCccee
Confidence            110        01111111111112322233333333    33333333  3578899999999999998652     25


Q ss_pred             EEEcc-ccccCCchhhhhhh---hhc--CCC----hhhHHHHhhhCCCCCCHHHHHH
Q 020294          247 VILDP-ACYYGHNEAEFGMS---WCA--GFG----GSFYNSYFEVMPKQPGFEKRRD  293 (328)
Q Consensus       247 ~iID~-~~~~G~p~~DLa~~---~~~--~~~----~~f~~~Y~~~~pl~~~~~~r~~  293 (328)
                      +|||| ++++++..+|||++   ++.  ...    ..|++||++++|+++.+.+.+.
T Consensus       234 giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~  290 (972)
T PRK06149        234 GVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALW  290 (972)
T ss_pred             EEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence            89999 68999999999975   231  111    3699999999999976554433

>PRK06148 hypothetical protein; Provisional

Probab=99.84  E-value=3.6e-19  Score=186.01  Aligned_cols=237  Identities=14%  Similarity=0.134  Sum_probs=159.4

Q ss_pred             CChhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCccc
Q 020294           35 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPR  110 (328)
Q Consensus        35 ~~~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~v~VP~  110 (328)
                      ++.+++++.+.+. |+.   ..+++++ |..|.+|+|+++++ .||||+.++. ....++.|.++|++|++. .++|||+
T Consensus        11 ~s~~~~~~~~~~~ygl~---~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~   86 (1013)
T PRK06148         11 FTTKDAEALLAQHFGIS---ATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPR   86 (1013)
T ss_pred             CCHHHHHHHHHHHcCCc---eEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCe
Confidence            6889999999887 443   2467785 56799999999877 8999999753 345567788899999875 4689999


Q ss_pred             ceeccccC--------CC--ceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCC
Q 020294          111 PFKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN  173 (328)
Q Consensus       111 ~~~~~~~~--------~~--~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~  173 (328)
                      |+......        +|  ..+.+++|++|.++.       ...+++|+.||+||.+...   |..+..  .    ...
T Consensus        87 ~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~---F~~p~~--~----r~~  157 (1013)
T PRK06148         87 LIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQG---FMHPGA--L----RDL  157 (1013)
T ss_pred             eeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhc---CCCCCc--c----ccc
Confidence            99764321        23  467899999998652       3479999999999999753   432211  0    112


Q ss_pred             CCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhh----hccCCCCCCceeccCCCCCCeeecCCC---Ce
Q 020294          174 KWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCLLHGDLWSGNISSDKNG---EP  246 (328)
Q Consensus       174 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~l~~~~~~~~LiHgDl~~~Nil~~~~~---~~  246 (328)
                      .|......     .+...+.    ...+++.++.++++++.+.+    .+.  ..+..+||||++++||++++++   ..
T Consensus       158 ~Wdl~~~~-----~l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~vIHgDln~~NiLv~~~~~~~is  226 (1013)
T PRK06148        158 DWDLRHAG-----RARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQVIHNDANDYNILVDADDGERIS  226 (1013)
T ss_pred             ccccccch-----hhhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcceECCCCCcccEEEcCCCCcceE
Confidence            23211000     1111111    11233334445555444332    233  3577899999999999999773   46


Q ss_pred             EEEcc-ccccCCchhhhhhhh--h--cCCC-----hhhHHHHhhhCCCCCCHHHHHHHH
Q 020294          247 VILDP-ACYYGHNEAEFGMSW--C--AGFG-----GSFYNSYFEVMPKQPGFEKRRDLY  295 (328)
Q Consensus       247 ~iID~-~~~~G~p~~DLa~~~--~--~~~~-----~~f~~~Y~~~~pl~~~~~~r~~ly  295 (328)
                      +|||| ++++++..+|||++.  +  ....     .+|++||++++|+++.+.+.+..+
T Consensus       227 GiIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~l  285 (1013)
T PRK06148        227 GLIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDL  285 (1013)
T ss_pred             EEEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence            89999 688999999999752  2  1111     369999999999997655544443

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=99.83  E-value=2.1e-19  Score=164.82  Aligned_cols=196  Identities=15%  Similarity=0.152  Sum_probs=120.0

Q ss_pred             eeeeeCCcccceeEEEEeCC--------ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           55 KICPVGGGCINLASRYGTDA--------GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--------~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      +++++.||.+|.+|+|+..+        ++||+|++....  ......|.++++.|++. + .+|+++....     ..+
T Consensus         2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~-g-~~P~~~~~~~-----~~~   74 (302)
T cd05156           2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER-N-LGPKLYGIFP-----NGR   74 (302)
T ss_pred             eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC-C-CCCceEEEeC-----CCc
Confidence            57889999999999999875        589999987532  24467899999999987 3 5899998864     257


Q ss_pred             EEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh
Q 020294          125 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD  197 (328)
Q Consensus       125 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~  197 (328)
                      |++|++|..+.       ....++++.|++||+.....  .+....    ..+....+.+.|.....  ..........+
T Consensus        75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  146 (302)
T cd05156          75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPL--SPEERD----LTPAIWKLLKQWLDLAE--TVIEIVDSDSE  146 (302)
T ss_pred             hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCC--CCCcCc----ccchHHHHHHHHHHHhh--hhhhhcccchh
Confidence            99999998753       24689999999999998631  010000    00000000011111000  00000000000


Q ss_pred             hCCCh---HHHHHHHHHHHHhhhhccC-CCCCCceeccCCCCCCeeecCC----CCeEEEcc-ccccCCchhhhhhh
Q 020294          198 QYGDS---TIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYGHNEAEFGMS  265 (328)
Q Consensus       198 ~~~~~---~~~~~~~~~~~~l~~~l~~-~~~~~~LiHgDl~~~Nil~~~~----~~~~iID~-~~~~G~p~~DLa~~  265 (328)
                      .....   ...+.+.++.+.+...... ...+.++|||||+++|||++++    +...+||| .+.+|+|.+|||..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~  223 (302)
T cd05156         147 KLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANH  223 (302)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHH
Confidence            00000   0111222222222221110 1367899999999999999874    66899998 58899999999975

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK12396 5-methylribose kinase; Reviewed

Probab=99.82  E-value=1.9e-19  Score=167.41  Aligned_cols=218  Identities=15%  Similarity=0.152  Sum_probs=142.8

Q ss_pred             hhhhhhcCChhHHHHHHHhc-CC--CcceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---------CcchHHHH
Q 020294           28 RTFAMAALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGE   93 (328)
Q Consensus        28 ~~~~~~~~~~~~i~~~l~~~-~~--~~~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E   93 (328)
                      .|..|..|+.+.+.+++.+. +.  ......++++|+|..|.||||...  .+++|||.+.+.         +.++...|
T Consensus         3 ~~~~y~~l~~~~v~~yl~~~l~~~~~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E   82 (409)
T PRK12396          3 KFTKYFLMEANDVIVYVKEKLSKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIE   82 (409)
T ss_pred             ccccceeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHH
Confidence            35567789999999999885 42  223345999999999999999864  468999998531         24566789


Q ss_pred             HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCC
Q 020294           94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV  162 (328)
Q Consensus        94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~  162 (328)
                      .++|+.+++..+-.||++|.++.   ....+|||+++....           +..++++|+.||+.|.....   ++.+.
T Consensus        83 ~~aL~~~~~~~P~~VP~vy~~D~---e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd---~~l~~  156 (409)
T PRK12396         83 SDVLQLEEELAPGLVPKVYLFDS---VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSD---VVMNH  156 (409)
T ss_pred             HHHHHHHHhhCCCcCCeEEEECc---HHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcch---hccCh
Confidence            99999998875666999999985   588999999976321           24579999999999886542   11110


Q ss_pred             CC-------------------cccccccCCCC-cccHHHHHHHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccC
Q 020294          163 DN-------------------TIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEG  221 (328)
Q Consensus       163 ~~-------------------~~g~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~  221 (328)
                      ..                   ..-.-|..+.. ..++        ..+.+....+. ..|.+++..+.++    +..|- 
T Consensus       157 ~~kk~~v~~f~N~eLc~itedlvft~Py~~~~~~n~~--------~~~~~~~~~~~l~~D~~Lk~ev~~L----k~~F~-  223 (409)
T PRK12396        157 KEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNEL--------FPLNEGWIREHIYSDKELRLEVAKL----KFSFM-  223 (409)
T ss_pred             HHHHHhhHhcCCHHHHHHhcccccccCcccchhccCC--------CChhhHHHHHHHhcCHHHHHHHHHH----HHHHH-
Confidence            00                   00000110000 0000        11111111111 1233333333333    33333 


Q ss_pred             CCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 020294          222 VNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW  266 (328)
Q Consensus       222 ~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~  266 (328)
                       ....+|||||||+|||++++++ +.|||++ ++|||+.|||+.+.
T Consensus       224 -~~~~aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~l  267 (409)
T PRK12396        224 -TNAQALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVM  267 (409)
T ss_pred             -hcchhhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHH
Confidence             2467999999999999998765 8999985 68999999999753

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.82  E-value=4.5e-19  Score=148.38  Aligned_cols=159  Identities=20%  Similarity=0.184  Sum_probs=109.9

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .++++++|.+|.+|+++..+++|++|+++...  ...++.|+..++.+.+.  ..+|+++..+.   ...++||||++|.
T Consensus         2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~   76 (170)
T cd05151           2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGS   76 (170)
T ss_pred             ceeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCC
Confidence            47889999999999999988899999987542  24468899999999875  35899998764   3568999999998


Q ss_pred             CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294          133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  212 (328)
Q Consensus       133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  212 (328)
                      ++...              ...                      .  .     . ..                +.+.+.+
T Consensus        77 ~l~~~--------------~~~----------------------~--~-----~-~~----------------~~l~~~l   96 (170)
T cd05151          77 ELLTE--------------DFS----------------------D--P-----E-NL----------------EKIAKLL   96 (170)
T ss_pred             ccccc--------------ccc----------------------C--H-----H-HH----------------HHHHHHH
Confidence            64210              000                      0  0     0 00                0001111


Q ss_pred             HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCC----hhhHHHHhhhC
Q 020294          213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFG----GSFYNSYFEVM  282 (328)
Q Consensus       213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~~----~~f~~~Y~~~~  282 (328)
                      .++-   .....+.++||||++++||+++ ++...+|||+ +.+|+|.+||+.++. ..++    ..|++.|....
T Consensus        97 ~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~~~~  168 (170)
T cd05151          97 KKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYFGRE  168 (170)
T ss_pred             HHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHhCCC
Confidence            1111   1001267899999999999998 4458899996 679999999997642 2333    46889997654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN02236 choline kinase

Probab=99.79  E-value=4.1e-17  Score=152.13  Aligned_cols=199  Identities=18%  Similarity=0.129  Sum_probs=128.4

Q ss_pred             hhHHHHHHHhcCCC------cceeeeeeeCCcccceeEEEEeCC------ccEEEEecCCCCcch--HHHHHHHHHHHHh
Q 020294           37 DDPIREWILSEGKA------THITKICPVGGGCINLASRYGTDA------GSFFVKTNRSIGPSM--FEGEALGLGAMYE  102 (328)
Q Consensus        37 ~~~i~~~l~~~~~~------~~i~~v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~~~~--~~~E~~~l~~L~~  102 (328)
                      ...|.+++.+..+.      ....+++++.||.+|.+|+++..+      .+||+|++.......  .+.|..+++.+++
T Consensus        16 ~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~   95 (344)
T PLN02236         16 PDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSR   95 (344)
T ss_pred             hHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHH
Confidence            34466666665333      246789999999999999998532      379999997543222  3679999999998


Q ss_pred             cCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294          103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  175 (328)
Q Consensus       103 ~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~  175 (328)
                      . ++ .|+++.....     ..|++|++|.++.       ....++++.|+++|+...+.    ....            
T Consensus        96 ~-gl-~P~~~~~~~~-----g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~----~~~~------------  152 (344)
T PLN02236         96 H-GQ-GPRLLGRFPN-----GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPG----PKNV------------  152 (344)
T ss_pred             c-CC-CCceEEEECC-----ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCC----CCCc------------
Confidence            6 45 8999877632     2689999998763       23579999999999987521    0000            


Q ss_pred             cccHHHHHHHhhhHHHHHHHHhhCCCh----HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEc
Q 020294          176 TSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD  250 (328)
Q Consensus       176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID  250 (328)
                       +-|.      ++..+++...+...+.    .....+.+.++.+...+.....+.++||+|++++|||++++ +...+||
T Consensus       153 -~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID  225 (344)
T PLN02236        153 -LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIID  225 (344)
T ss_pred             -hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEe
Confidence             1111      1222221111110000    00122233333333333322357799999999999999864 5689999


Q ss_pred             cc-cccCCchhhhhhh
Q 020294          251 PA-CYYGHNEAEFGMS  265 (328)
Q Consensus       251 ~~-~~~G~p~~DLa~~  265 (328)
                      |+ +.+|+|.+|||..
T Consensus       226 ~Eya~~~~~~~Dia~~  241 (344)
T PLN02236        226 YEYASYNPVAYDIANH  241 (344)
T ss_pred             ehhccccchHHHHHHH
Confidence            85 7899999999975

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=99.76  E-value=1e-16  Score=148.74  Aligned_cols=200  Identities=18%  Similarity=0.232  Sum_probs=130.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-----cEEEEecCCCCcc--hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIGPS--MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-----~~vlK~~~~~~~~--~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ...+++++.||.+|.+|+++..++     +||+|++...+..  ..+.|..+++.+++. ++ .|+++....  .|   +
T Consensus        15 ~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl-~P~~l~~~~--~G---~   87 (330)
T PLN02421         15 SDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GF-GAKLLGVFG--NG---M   87 (330)
T ss_pred             CceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CC-CCceeEEeC--Cc---E
Confidence            467899999999999999986432     8999999754322  236799999999986 34 588887753  22   6


Q ss_pred             EEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh
Q 020294          125 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD  197 (328)
Q Consensus       125 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~  197 (328)
                      |.+|++|..+.       .....+++.|+++|+...+.   . ..+             .-|.      ++..+++.+..
T Consensus        88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~---~-~~~-------------~~~~------~i~~y~~~~~~  144 (330)
T PLN02421         88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPG---S-KEP-------------QLWN------DIFKFYEKAST  144 (330)
T ss_pred             eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCC---C-CCC-------------cHHH------HHHHHHHHhhh
Confidence            99999998763       24689999999999987521   0 000             0111      12222222111


Q ss_pred             h-CCChHH--------HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEcc-ccccCCchhhhhhhh
Q 020294          198 Q-YGDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHNEAEFGMSW  266 (328)
Q Consensus       198 ~-~~~~~~--------~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~-~~~~G~p~~DLa~~~  266 (328)
                      . ..+++.        ...+.+.+..+..++.....+.++||+|+.++|||++++ +...+||| .+.+++|.+|||...
T Consensus       145 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f  224 (330)
T PLN02421        145 VKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHF  224 (330)
T ss_pred             cccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHH
Confidence            0 011100        112222333344444332467899999999999999754 56899998 589999999999753


Q ss_pred             h--cCC--------C----hhhHHHHhhh
Q 020294          267 C--AGF--------G----GSFYNSYFEV  281 (328)
Q Consensus       267 ~--~~~--------~----~~f~~~Y~~~  281 (328)
                      +  .++        +    ..|++.|...
T Consensus       225 ~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~  253 (330)
T PLN02421        225 NEYAGFDCDYSLYPSKEEQYHFFRHYLRP  253 (330)
T ss_pred             HHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence            2  222        2    2589999864

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=99.76  E-value=1.9e-17  Score=152.35  Aligned_cols=195  Identities=20%  Similarity=0.229  Sum_probs=120.4

Q ss_pred             eeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           58 PVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+|+|..|.||||..+++  ++|||.+.+.          +.++...|.+.|+.+++..+-.||++|.++.   ....++
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~---e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT---EMAVTV   78 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc---ccceeh
Confidence            479999999999998764  8999998631          2355678999999888764445999999985   578899


Q ss_pred             EeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccc-cCCC----------CcccHHHHH
Q 020294          126 MEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP-QINK----------WTSNWIEFY  183 (328)
Q Consensus       126 ~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~-~~~~----------~~~~w~~~~  183 (328)
                      ||+++....           +..++++|+.||+.|.....   +..+......... ..|.          ..+.+.+..
T Consensus        79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~  155 (370)
T TIGR01767        79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHD  155 (370)
T ss_pred             HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhh
Confidence            999976431           24579999999999865532   2211100000000 0000          001110000


Q ss_pred             HHhhhHHHHHHHHhhC-CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhh
Q 020294          184 AEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAE  261 (328)
Q Consensus       184 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~D  261 (328)
                       ..++.+.++...+.. .++++...    ...++..+.  ....+|||||||++||++.+++ +.+|||+ +.+|++.+|
T Consensus       156 -~n~~~p~l~~~~~~l~~d~~l~~~----v~~Lk~~f~--~~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~D  227 (370)
T TIGR01767       156 -TNDFEEELRPFVAKLRNDDSLKIE----AAKLKHSFL--ASAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFD  227 (370)
T ss_pred             -hhcCChhHHHHHHHHhcCHHHHHH----HHHHHHhhc--cCcceeeeccCCcccEEEcCCC-CEEEcCcccccCchHhh
Confidence             011222222221111 12222222    223343333  2467999999999999997765 7899996 789999999


Q ss_pred             hhhhh
Q 020294          262 FGMSW  266 (328)
Q Consensus       262 La~~~  266 (328)
                      |+.+.
T Consensus       228 lg~~i  232 (370)
T TIGR01767       228 IGQFI  232 (370)
T ss_pred             HHHHH
Confidence            99763

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PTZ00296 choline kinase; Provisional

Probab=99.68  E-value=9.9e-15  Score=139.73  Aligned_cols=206  Identities=11%  Similarity=0.029  Sum_probs=127.1

Q ss_pred             cCChhHHHHHHHhcCCCc------ceeeeeeeCCcccceeEEEEeCC----------ccEEEEecCCCCcch--HHHHHH
Q 020294           34 ALSDDPIREWILSEGKAT------HITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSM--FEGEAL   95 (328)
Q Consensus        34 ~~~~~~i~~~l~~~~~~~------~i~~v~~i~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~~--~~~E~~   95 (328)
                      .++.+.+..++.+.-+++      .| .++++.||.+|.+|++++.+          .+|++|++...+...  ...|..
T Consensus        83 ~~~~~~~~~i~~~~vp~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~  161 (442)
T PTZ00296         83 LTDPLYIKKICLEKVPEWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFE  161 (442)
T ss_pred             cCChHHHHHHHHHHCCccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHH
Confidence            455556666665432222      44 89999999999999998752          379999997644322  356899


Q ss_pred             HHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccc
Q 020294           96 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS  168 (328)
Q Consensus        96 ~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~  168 (328)
                      +++.|++. + ..|+++...     ..+.|.+|++|.+++       .....+++.|+++|......   ..+.  ..+.
T Consensus       162 v~~~ls~~-g-i~P~l~~~f-----~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~---~~~~--~f~~  229 (442)
T PTZ00296        162 VYKTMSKY-R-IAPQLLNTF-----SGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKR---HLPE--HWDR  229 (442)
T ss_pred             HHHHHHHC-C-CCCceEEEe-----CCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccc---cCch--hccC
Confidence            99999986 3 578888543     347899999998653       34689999999999986311   0000  0000


Q ss_pred             cccCCCCcccHHHHHHHhhhHHHHHHHHhhC-CC------hHHHHHHHHHHHHhhh--hccCCCCCCceeccCCCCCCee
Q 020294          169 TPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD------STIYQRGHRLMKNLAP--LFEGVNVEPCLLHGDLWSGNIS  239 (328)
Q Consensus       169 ~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~-~~------~~~~~~~~~~~~~l~~--~l~~~~~~~~LiHgDl~~~Nil  239 (328)
                      .|      .-|.      ++..+...+.... ..      ..+.+.+..+.+.+..  .+.....+.++||+|+.++|||
T Consensus       230 ~p------~~f~------~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL  297 (442)
T PTZ00296        230 TP------CIFK------MMEKWKNQLSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNII  297 (442)
T ss_pred             CC------cHHH------HHHHHHHHHHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCcccee
Confidence            11      1111      1222222221110 00      0111122222221111  0112235789999999999999


Q ss_pred             ecCCCCeEEEcc-ccccCCchhhhhhh
Q 020294          240 SDKNGEPVILDP-ACYYGHNEAEFGMS  265 (328)
Q Consensus       240 ~~~~~~~~iID~-~~~~G~p~~DLa~~  265 (328)
                      .++++ ..+||| .+.+.+|.+|||..
T Consensus       298 ~~~~~-l~LIDfEYAg~ndpafDIAn~  323 (442)
T PTZ00296        298 NTNKC-LRLIDFEYSGYNFLATDIANF  323 (442)
T ss_pred             ecCCC-EEEEeecccccccHHHHHHHH
Confidence            86555 899998 58999999999965

>PTZ00384 choline kinase; Provisional

Probab=99.61  E-value=9.8e-14  Score=130.65  Aligned_cols=203  Identities=13%  Similarity=0.065  Sum_probs=123.1

Q ss_pred             hhHHHHHHHhcCCCc-----ceeeeeeeCCcccceeEEEEeCCc---c-----EEEEecCCCCcch--HHHHHHHHHHHH
Q 020294           37 DDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDAG---S-----FFVKTNRSIGPSM--FEGEALGLGAMY  101 (328)
Q Consensus        37 ~~~i~~~l~~~~~~~-----~i~~v~~i~~G~~n~~y~v~~~~~---~-----~vlK~~~~~~~~~--~~~E~~~l~~L~  101 (328)
                      ...|.+++.+.-++.     ....++++.||.+|.+|+|+.+++   .     +++|++.......  .+.|.++++.|+
T Consensus        31 ~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls  110 (383)
T PTZ00384         31 HSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLG  110 (383)
T ss_pred             HHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHH
Confidence            344666666652222     346899999999999999986543   3     4555554322211  356899999999


Q ss_pred             hcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCC
Q 020294          102 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  174 (328)
Q Consensus       102 ~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~  174 (328)
                      +.  --.|+++....     .++++||++|+.+.       .....+++.|+++|.....   +. + . ..+..|    
T Consensus       111 ~~--glgP~l~~~f~-----~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~---~~-p-~-~~~~~p----  173 (383)
T PTZ00384        111 DN--NFGPKIIGRFG-----DFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTE---LV-P-K-EWDRTP----  173 (383)
T ss_pred             hC--CCCCeEEEecC-----CEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhccccc---CC-C-c-cccCcc----
Confidence            86  46889988764     37999999998763       2467999999999997642   10 0 0 000111    


Q ss_pred             CcccHHHHHHHhhhHHHHHHHH---hh---CCC-hHHHHHHHHHHHHhhhhccC---CCCCCceeccCCCCCCeeecCCC
Q 020294          175 WTSNWIEFYAEHRLGYQLKLAL---DQ---YGD-STIYQRGHRLMKNLAPLFEG---VNVEPCLLHGDLWSGNISSDKNG  244 (328)
Q Consensus       175 ~~~~w~~~~~~~~l~~~~~~~~---~~---~~~-~~~~~~~~~~~~~l~~~l~~---~~~~~~LiHgDl~~~Nil~~~~~  244 (328)
                        ..|.      ++..+.....   ..   ..+ ..+.+.++++.+.+...+..   ...+.++||.|+.++|||.++++
T Consensus       174 --~~~~------~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~~~  245 (383)
T PTZ00384        174 --MFLT------KISTWSQHVERIIKKYNLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFNQG  245 (383)
T ss_pred             --hHHH------HHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecCCC
Confidence              1111      1111111110   00   011 11222223222222221211   02357999999999999986554


Q ss_pred             CeEEEcc-ccccCCchhhhhhh
Q 020294          245 EPVILDP-ACYYGHNEAEFGMS  265 (328)
Q Consensus       245 ~~~iID~-~~~~G~p~~DLa~~  265 (328)
                       +.+||| .+.+++|.+|||..
T Consensus       246 -l~lID~EYA~~n~~~fDLAn~  266 (383)
T PTZ00384        246 -IYFIDFDFAGFNYVGWEIANF  266 (383)
T ss_pred             -EEEEEeccccCCchHhHHHHH
Confidence             899998 58999999999965

>PRK10271 thiK thiamine kinase; Provisional

Probab=99.60  E-value=3.5e-14  Score=119.68  Aligned_cols=170  Identities=14%  Similarity=0.168  Sum_probs=106.1

Q ss_pred             EEEeeecCCCCC--ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC
Q 020294          124 IIMEFIEFGSSR--GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD  201 (328)
Q Consensus       124 ~v~e~l~G~~~~--~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~  201 (328)
                      ++.||++|.+.+  ....++++.++++|..+.    +|.+.+               .   +  .++..+.........+
T Consensus         1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~~---------------l---~--~~i~~Yw~~l~~~~~~   56 (188)
T PRK10271          1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRIT---------------L---L--PLLEQYWQQSDPARRT   56 (188)
T ss_pred             CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCCC---------------H---H--HHHHHHHHHhccccCC
Confidence            468999999764  368999999999999775    442211               0   1  2344444444322223


Q ss_pred             hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhhhhhhhhcC--CChhhHHHH
Q 020294          202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCAG--FGGSFYNSY  278 (328)
Q Consensus       202 ~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~p~~DLa~~~~~~--~~~~f~~~Y  278 (328)
                      +...    +....+.......+.+.++||||++++|+++++++ ..+||| .+..|||.+||+.++...  -.+.|++.|
T Consensus        57 ~~wl----~~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y  131 (188)
T PRK10271         57 PFWL----RMLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY  131 (188)
T ss_pred             HHHH----HHHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence            3222    22333322222224678999999999999998877 789998 578999999999876431  124799999


Q ss_pred             hhhCCCCCC-HHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHH
Q 020294          279 FEVMPKQPG-FEKRRDLYMLYHYLNHYNLF--------GSGYRSSALSIIDDY  322 (328)
Q Consensus       279 ~~~~pl~~~-~~~r~~ly~l~~~l~~~~~~--------~~~y~~~~~~~~~~~  322 (328)
                      +...-.++. +..|..-+..+.......+|        ...|...+.++.+++
T Consensus       132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~d~~fl~~a~~~~~~~  184 (188)
T PRK10271        132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTGDQQFIRLADDTWRQL  184 (188)
T ss_pred             hCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence            955334443 44555555444433333333        356766777666654

>TIGR02905 spore_yutH spore coat protein YutH

Probab=99.59  E-value=1.8e-13  Score=126.16  Aligned_cols=221  Identities=14%  Similarity=0.118  Sum_probs=140.6

Q ss_pred             HHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-cccceeccccC---
Q 020294           43 WILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APRPFKVGALP---  118 (328)
Q Consensus        43 ~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~-VP~~~~~~~~~---  118 (328)
                      ++.++  |..+.++++.  |   .+..+.|++|.|+||.....+.+.+.....++++|+++ |++ ||+++......   
T Consensus         4 vl~~Y--~l~~~~~~~~--g---~~~~~~t~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~   75 (313)
T TIGR02905         4 LYDQF--GLYCDERFRV--G---RYEAFRANNQAYLIVPVDGLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSA   75 (313)
T ss_pred             hHHhh--CcCcccceec--C---ceeeEEeCCceEEEEEecCCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeE
Confidence            44444  4568888876  3   35667899999999999654455677778889999987 686 99999875543   


Q ss_pred             --CCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH--hhhHHHHHH
Q 020294          119 --TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKL  194 (328)
Q Consensus       119 --~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~--~~l~~~~~~  194 (328)
                        +|.++++++|++|.....  ..+|+.||+||.++..   |..+...       ...| ..|.+.+..  .+++...+.
T Consensus        76 ~~~g~~y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~-------~~~~-~~~~~~~~k~~~el~~~~~~  142 (313)
T TIGR02905        76 LIDGVSYYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWK-------KSRI-GQWKELWAKRLDQLEDWWQS  142 (313)
T ss_pred             EECCEEEEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCccc-------cccc-cccHHHHHHHHHHHHHHHHH
Confidence              589999999987765322  3999999999999973   3222111       0112 344444432  123333322


Q ss_pred             HHhhC-CCh-H---------HHHHHHHHHHHhh-----hhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCc
Q 020294          195 ALDQY-GDS-T---------IYQRGHRLMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHN  258 (328)
Q Consensus       195 ~~~~~-~~~-~---------~~~~~~~~~~~l~-----~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p  258 (328)
                      +.... .++ +         ..+..++.++.+.     ++-.. ....++||||+...|++ +++ ..++||++.++++|
T Consensus       143 ~~~~~~~s~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~-~~~~~lCH~d~~~hn~l-~~~-~~~~i~~d~~~D~~  219 (313)
T TIGR02905       143 LLAQGPQTLFDEQFLETFPYYLGLTENAIQYAADTELDDEPGL-ADSGTICHERFGETTWL-ERG-GLIKPPTEWVYDHP  219 (313)
T ss_pred             HHhcCCCChHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhc-cccCccccCccCccccc-cCC-CeEecccccccccc
Confidence            22211 111 1         1122233333221     11111 24669999999999987 444 46788887779999


Q ss_pred             hhhhhhh--h-h---cC--CC--hhhHHHHhhhCCCCCC
Q 020294          259 EAEFGMS--W-C---AG--FG--GSFYNSYFEVMPKQPG  287 (328)
Q Consensus       259 ~~DLa~~--~-~---~~--~~--~~f~~~Y~~~~pl~~~  287 (328)
                      ..||+..  . +   ..  +.  ..++++|++..||++.
T Consensus       220 ~~DL~~firk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~  258 (313)
T TIGR02905       220 ARDLAEWIRERYMGEIRQNQRAIASFLQEYEQAAPLTPF  258 (313)
T ss_pred             hhHHHHHHHHHHHHhccccHHHHHHHHHHhhhcCCCCHH
Confidence            9999954  1 2   11  22  4789999999999864

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=99.59  E-value=5.8e-14  Score=133.26  Aligned_cols=258  Identities=18%  Similarity=0.261  Sum_probs=150.2

Q ss_pred             hcCChhHHHHHHHhc-CCCc---ceeeeeeeC--CcccceeEEEEeC------C----ccEEEEecCC----------C-
Q 020294           33 AALSDDPIREWILSE-GKAT---HITKICPVG--GGCINLASRYGTD------A----GSFFVKTNRS----------I-   85 (328)
Q Consensus        33 ~~~~~~~i~~~l~~~-~~~~---~i~~v~~i~--~G~~n~~y~v~~~------~----~~~vlK~~~~----------~-   85 (328)
                      |.++++++++-|+.. +...   +-.+++.||  .|.++.+.+|+.+      +    .++|||+++.          . 
T Consensus        11 Thvtw~dve~~l~~~l~t~a~~g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~   90 (414)
T PF07914_consen   11 THVTWEDVEEALQEALGTKAKFGENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKF   90 (414)
T ss_pred             CceeHHHHHHHHHHHhCCCcCcCCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhcc
Confidence            778999999999887 3211   345677775  5679999999853      1    1799999852          0 


Q ss_pred             ------Cc------------chHHHHHHHHHHHHhc--CCCCcccceeccccCC---CceEEEEeeecCCCC-------C
Q 020294           86 ------GP------------SMFEGEALGLGAMYET--RTIRAPRPFKVGALPT---GGSYIIMEFIEFGSS-------R  135 (328)
Q Consensus        86 ------~~------------~~~~~E~~~l~~L~~~--~~v~VP~~~~~~~~~~---~~~~~v~e~l~G~~~-------~  135 (328)
                            ..            ..-.+|+..++.+...  .++|+|++|......+   -.++++|||+++...       +
T Consensus        91 ~~~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~  170 (414)
T PF07914_consen   91 EGGKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLS  170 (414)
T ss_pred             ccccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCC
Confidence                  00            1113678888888766  4889999998765532   358999999999642       1


Q ss_pred             -ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC-cccHHHHHHHhhhHHHHHHHHhhC---CChHHHHHHHH
Q 020294          136 -GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQY---GDSTIYQRGHR  210 (328)
Q Consensus       136 -~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~  210 (328)
                       .+..++.+.||++|+.+...+.-..  ....|     ..+ ...+.+++....+...........   .++.+.+.++.
T Consensus       171 ~eql~~iv~aLA~~~A~sl~ls~ee~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~  243 (414)
T PF07914_consen  171 VEQLLQIVRALAKFHALSLKLSEEEK--KSISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIEK  243 (414)
T ss_pred             HHHHHHHHHHHHHHHHhHccCCHHHh--hhccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHHH
Confidence             4678899999999999874210000  00000     000 011122221111211111111111   01111122221


Q ss_pred             HHH------------HhhhhccCCCCCCceeccCCCCCCeeecCCCC-----eEEEccc-cccCCchhhhhhhhhcCC--
Q 020294          211 LMK------------NLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE-----PVILDPA-CYYGHNEAEFGMSWCAGF--  270 (328)
Q Consensus       211 ~~~------------~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~-----~~iID~~-~~~G~p~~DLa~~~~~~~--  270 (328)
                      +..            .+...+   ..+++|||||||..|||+++++.     .+||||. +..|.|..||+.+.+.+.  
T Consensus       244 ~~~~~~~~~~~~~~~~i~~~l---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~  320 (414)
T PF07914_consen  244 FEHYLPDIKNFEKASNINKQL---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSG  320 (414)
T ss_pred             HHHhcccHHhHHHHhhhHHhc---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCH
Confidence            111            111222   35889999999999999998532     4899995 579999999997643222  


Q ss_pred             ------ChhhHHHHhhh----C----CCCCCHHHHHHHHHHHHH
Q 020294          271 ------GGSFYNSYFEV----M----PKQPGFEKRRDLYMLYHY  300 (328)
Q Consensus       271 ------~~~f~~~Y~~~----~----pl~~~~~~r~~ly~l~~~  300 (328)
                            .+.+++.|.+.    .    ..+=.+++-...|+++..
T Consensus       321 edRR~~~~~lL~~Yy~~f~~~l~~~~~~PfT~eqL~~sY~l~fp  364 (414)
T PF07914_consen  321 EDRREHTEELLEYYYDTFTEALEDGGKAPFTLEQLKDSYRLYFP  364 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHH
Confidence                  12344444222    1    112236777788886544

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=99.58  E-value=5.7e-14  Score=119.46  Aligned_cols=214  Identities=16%  Similarity=0.161  Sum_probs=143.0

Q ss_pred             eeeeCCcccc-eeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           56 ICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        56 v~~i~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      .+++..|.+. .+|++..+.+ .+++|+.+......+..|++-+.|++.+ ++++|.|+..... .++.|++|+-++|.+
T Consensus        23 w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~~  100 (266)
T COG3231          23 WRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAAELEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGED  100 (266)
T ss_pred             cceeeccCCCCeEEEEeccCCCceEEEEecCcchhhhhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCCc
Confidence            4556667655 7999987655 7899998765556789999999999997 7999999988764 578999999999987


Q ss_pred             CC---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC-h-
Q 020294          134 SR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD-S-  202 (328)
Q Consensus       134 ~~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~-~-  202 (328)
                      ..         ..+..+++.|..||..+...+-|+..                 ..     .++...-+.......+ + 
T Consensus       101 ~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~r-----------------l~-----~rl~~a~~r~~a~~vdesd  158 (266)
T COG3231         101 ASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDRR-----------------LA-----RRLAKARARVRAGLVDESD  158 (266)
T ss_pred             ccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcchH-----------------HH-----HHHHHHHHHHhccCCChhh
Confidence            52         24678999999999987643323211                 00     1111111000000011 0 


Q ss_pred             ---H-HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh-hh-----c--C
Q 020294          203 ---T-IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS-WC-----A--G  269 (328)
Q Consensus       203 ---~-~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~-~~-----~--~  269 (328)
                         + .-....++.+.+....+. ....++||||.-.-|+|+++++..++||.. ..+|++..||+.. |.     +  .
T Consensus       159 fd~e~qgr~~~El~d~L~~~rp~-~edLVv~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl~g~~  237 (266)
T COG3231         159 FDEERQGRTAEELFDELEARRPA-VEDLVVTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNLGGDV  237 (266)
T ss_pred             cChhhcCCCHHHHHHHHHhcCCc-hhhceeecCcccCcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhccCcch
Confidence               0 001122233322221122 356799999999999999988778999985 5799999999975 31     1  2


Q ss_pred             CChhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          270 FGGSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       270 ~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      |.+.|++.|.-.. .+   ..|+.+|++.
T Consensus       238 ~~~~fl~~Yg~~~-~d---~~rl~~yr~l  262 (266)
T COG3231         238 WDDPFLDAYGRGA-ID---PARLAYYRLL  262 (266)
T ss_pred             hhHHHHHHhCcCC-CC---HHHHHHHHHH
Confidence            5678999998432 12   5789999764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.56  E-value=9e-14  Score=112.78  Aligned_cols=145  Identities=26%  Similarity=0.279  Sum_probs=104.0

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      ++.++.|..|.+|++..+++.+++|...... ...+..|...++.|.+. +.++|+++..... .+..+++|||++|..+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeec
Confidence            4678899999999999988899999986532 24688999999999886 6889999987654 3678999999999754


Q ss_pred             CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHH
Q 020294          135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN  214 (328)
Q Consensus       135 ~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (328)
                      ...              ..                       ..+.      .+                   ...+.+.
T Consensus        81 ~~~--------------~~-----------------------~~~~------~~-------------------~~~~~~~   98 (155)
T cd05120          81 DEV--------------SE-----------------------EEKE------DI-------------------AEQLAEL   98 (155)
T ss_pred             ccC--------------CH-----------------------HHHH------HH-------------------HHHHHHH
Confidence            211              00                       0000      00                   0111111


Q ss_pred             hhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 020294          215 LAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW  266 (328)
Q Consensus       215 l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~  266 (328)
                      +..+..  ....+++|||++++||++++++...++||+ +.++++.+|++.+.
T Consensus        99 l~~lh~--~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d~~~~~  149 (155)
T cd05120          99 LAKLHQ--LPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFDLAAAL  149 (155)
T ss_pred             HHHHhC--CCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHHHHHHH
Confidence            121111  123689999999999999886778999985 67999999999653

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=99.45  E-value=5.4e-12  Score=112.02  Aligned_cols=215  Identities=16%  Similarity=0.118  Sum_probs=126.8

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC-CCC
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF-GSS  134 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G-~~~  134 (328)
                      .++.+|..+.|+.|.+.+| +.|||+..+..  ....|......|....|--+.+++..+.   ....+++|++.+ .++
T Consensus         8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~--~~~~E~~g~~~L~~w~G~GaVrll~~d~---~~~AlLLErl~~g~~L   82 (253)
T PF04655_consen    8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA--EAEHEARGEAALRWWNGRGAVRLLAADP---ERGALLLERLDPGRSL   82 (253)
T ss_pred             CCCCCCcceEEEEEEcCCCCeEEEEecCCcc--cchhhhhHHhHhheeCCCCceeeecccc---ccchhhhhhccCCCch
Confidence            3466789999999999887 89999997532  2334542222333333444669998873   478999999955 444


Q ss_pred             C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          135 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       135 ~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      .         .....++..+++||......  +  +  ..   .+    ...+|.+.+..     ........ .+.   
T Consensus        83 ~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~--~--p--~~---l~----~l~~~~~~l~~-----~~~~~~~~-~~~---  140 (253)
T PF04655_consen   83 ASLPREGDDDEATRIAAGLLRRLHRPAPEP--L--P--SG---LP----PLADWFARLFA-----RARERAGA-PPR---  140 (253)
T ss_pred             hhcccccCchHHHHHHHHHHHHHhCCCCCC--C--C--cc---ch----hHHHHHHHHHH-----HhHhhhcc-ccH---
Confidence            2         23578899999999876421  1  0  00   00    01223222211     11111100 111   


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhhcCC-------C----hhh
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGF-------G----GSF  274 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~~~~~~-------~----~~f  274 (328)
                      ..+++..+...+++.+ +.+.+++|||||++|||-...+.-..||+....|+|+||++-+.+..+       .    ...
T Consensus       141 ~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~NIL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i~~r  219 (253)
T PF04655_consen  141 RLVDAAAALARELLAS-PGEEVLLHGDLHHGNILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERIRRR  219 (253)
T ss_pred             HHHHHHHHHHHHHhcC-CCcceeeccccchHhhhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHHHHH
Confidence            2233333333445554 456799999999999998664434689999999999999996643221       1    123


Q ss_pred             HHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 020294          275 YNSYFEVMPKQPGFEKRRDLYMLYHYLN  302 (328)
Q Consensus       275 ~~~Y~~~~pl~~~~~~r~~ly~l~~~l~  302 (328)
                      ++...+...++   .+|+.-+.+...+.
T Consensus       220 ~~~la~~~gld---~~R~~~W~~~~~vl  244 (253)
T PF04655_consen  220 AALLAEAAGLD---RERILAWAFARAVL  244 (253)
T ss_pred             HHHHHHHHCcC---HHHHHHHHHHHHHH
Confidence            44445555555   45666665544433

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=99.43  E-value=1.3e-12  Score=119.45  Aligned_cols=205  Identities=18%  Similarity=0.229  Sum_probs=115.4

Q ss_pred             CCcccceeEEEEeCC-----c-----cEEEEecCCC--------CcchHHHHHHHHHHHHhcC----------CCCcccc
Q 020294           60 GGGCINLASRYGTDA-----G-----SFFVKTNRSI--------GPSMFEGEALGLGAMYETR----------TIRAPRP  111 (328)
Q Consensus        60 ~~G~~n~~y~v~~~~-----~-----~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~----------~v~VP~~  111 (328)
                      |.|..+.+|||+...     +     ++|+|..+..        ....+++|+.+++.+....          ...+|++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~   81 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC   81 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence            567788888876521     1     7999998731        1356788998888665321          1247999


Q ss_pred             eeccccCCCceEEEEeeecCCCC---------C-ccHHHHHHHHHHHHhcCCCCC-----CCCCCCCCcccccccCCCCc
Q 020294          112 FKVGALPTGGSYIIMEFIEFGSS---------R-GNQSVFGKKLAEMHKAGKSSK-----GFGFDVDNTIGSTPQINKWT  176 (328)
Q Consensus       112 ~~~~~~~~~~~~~v~e~l~G~~~---------~-~~~~~lg~~La~lH~~~~~~~-----~~g~~~~~~~g~~~~~~~~~  176 (328)
                      +..... .+..++|||.+.....         + ..+..+.+.||++|+.+....     .+.-....... ......-.
T Consensus        82 ~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  159 (294)
T PF02958_consen   82 YYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFE-EPFFREEL  159 (294)
T ss_pred             EEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhcccccee-ccchhhhh
Confidence            988743 3468999999964321         1 457889999999999886211     01100000000 00000000


Q ss_pred             ccH-HHHHHHhhhHHHHHHHHhhCC-----ChHHHHHHHHHHHHhhhhccC-CCCCCceeccCCCCCCeeecCCC-----
Q 020294          177 SNW-IEFYAEHRLGYQLKLALDQYG-----DSTIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKNG-----  244 (328)
Q Consensus       177 ~~w-~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~-~~~~~~LiHgDl~~~Nil~~~~~-----  244 (328)
                      ..| ..++. ..+....+...+...     ...+.....++.+.+..+... .....+|||||+|.+||++..++     
T Consensus       160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~  238 (294)
T PF02958_consen  160 EEWFEEFFE-QGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPI  238 (294)
T ss_pred             hHHHHHHHH-HHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEccccccccc
Confidence            111 11111 111111111111100     011223333444444444422 14577999999999999997652     


Q ss_pred             CeEEEccc-cccCCchhhhhhhhh
Q 020294          245 EPVILDPA-CYYGHNEAEFGMSWC  267 (328)
Q Consensus       245 ~~~iID~~-~~~G~p~~DLa~~~~  267 (328)
                      .+.+|||. +.+|.|..||+.+.+
T Consensus       239 ~~~liDfQ~~~~g~p~~Dl~~fl~  262 (294)
T PF02958_consen  239 DVVLIDFQLARYGSPAIDLAYFLY  262 (294)
T ss_pred             cceeeccccccCCCcHhHHHHHHH
Confidence            36899995 679999999997644

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=99.40  E-value=4e-13  Score=116.87  Aligned_cols=187  Identities=19%  Similarity=0.220  Sum_probs=99.4

Q ss_pred             ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHH
Q 020294           75 GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKL  145 (328)
Q Consensus        75 ~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~L  145 (328)
                      .+|++|++...+...  .+.|..+++.+++.  --.|+++.....     ..+++|++|.++.       .....+++.|
T Consensus         3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l   75 (211)
T PF01633_consen    3 EKYLVRIPGEGTENFIDRENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLL   75 (211)
T ss_dssp             SEEEEEEEESCGCSHHHHHHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHH
T ss_pred             CEEEEEeCCCCcccccCHHHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHH
Confidence            479999997653333  45688899999885  478889988642     5788999998753       2468999999


Q ss_pred             HHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH-hhhHHHHHHHHhhC-CChHHHHHHHHHHHHhhhhccCCC
Q 020294          146 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVN  223 (328)
Q Consensus       146 a~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~  223 (328)
                      ++||....+.  .. ...         .-| +.+..+... ....  ........ ........+.+.+..+...+....
T Consensus        76 ~~lH~~~~~~--~~-~~~---------~~~-~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~  140 (211)
T PF01633_consen   76 AKLHSIPISP--NS-KKP---------DLW-DRIDKYMNKKSEFL--FKRKKKKKSIDKEDLEDLQEELEELEKLLEKSN  140 (211)
T ss_dssp             HHHHTHHHTT--SS-SS----------HHH-HHHHHHHHHHHTCC--CCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHhhccccc--cc-Ccc---------hHH-HHhhhhccchhhhh--hhhhhhccccccCCHHHHHHHHhhhhhhhhccC
Confidence            9999988611  00 000         000 111111000 0000  00000000 000011222333333444443324


Q ss_pred             CCCceeccCCCCCCeee-cCCCCeEEEccc-cccCCchhhhhhhhh---cCC--ChhhHHHHhhhCC
Q 020294          224 VEPCLLHGDLWSGNISS-DKNGEPVILDPA-CYYGHNEAEFGMSWC---AGF--GGSFYNSYFEVMP  283 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~-~~~~~~~iID~~-~~~G~p~~DLa~~~~---~~~--~~~f~~~Y~~~~p  283 (328)
                      .+.++||+|++++|||+ +.++...+|||+ +.++++.+|||...+   ...  .+.|++.|.+..|
T Consensus       141 ~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~~~~~~yp  207 (211)
T PF01633_consen  141 SPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFKCDYSKYP  207 (211)
T ss_dssp             GGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTEE-GGGS-
T ss_pred             CCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhhhhHhhCC
Confidence            56899999999999999 556678999985 889999999997643   111  2235666666555

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG4857 Predicted kinase [General function prediction only]

Probab=99.35  E-value=3.5e-11  Score=105.61  Aligned_cols=202  Identities=18%  Similarity=0.160  Sum_probs=118.6

Q ss_pred             CCCcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           48 GKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        48 ~~~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      |++..-..++.||.|..|-+|.|....+  ..++|++-+.          ....-..|...|..=.++.+--||++|.++
T Consensus        27 G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~D  106 (408)
T COG4857          27 GPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFD  106 (408)
T ss_pred             CCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEeec
Confidence            5444455688999999999999987654  8899988531          112334577667666666677899999998


Q ss_pred             ccCCCceEEEEeeec-----------CCCCCccHHHHHHHHHHHHhcCCCCC-----------CCCCCCCCcccccccCC
Q 020294          116 ALPTGGSYIIMEFIE-----------FGSSRGNQSVFGKKLAEMHKAGKSSK-----------GFGFDVDNTIGSTPQIN  173 (328)
Q Consensus       116 ~~~~~~~~~v~e~l~-----------G~~~~~~~~~lg~~La~lH~~~~~~~-----------~~g~~~~~~~g~~~~~~  173 (328)
                      .   ....++||++.           |+..+.....+|..+++-=-......           .|-  .+..+.-+ ..-
T Consensus       107 e---~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~Ft--NpELCDIt-E~L  180 (408)
T COG4857         107 E---IMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFT--NPELCDIT-ENL  180 (408)
T ss_pred             c---hhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhC--Cchhhcch-hce
Confidence            4   58899999975           44445667888888887433332110           011  01000000 000


Q ss_pred             CCcccHHHHHHH----hhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEE
Q 020294          174 KWTSNWIEFYAE----HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL  249 (328)
Q Consensus       174 ~~~~~w~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iI  249 (328)
                      .+.+.+-+.-..    ..+.+....+.   .+.+++-...+    +++.|..  ...+|||||||+|.|++.+.+ ..+|
T Consensus       181 VFtdPyfd~d~Nr~~~~~l~~fVe~L~---~n~dlkvea~k----Lk~~F~~--~aetLiHGDLHsGSIfvte~e-tkvI  250 (408)
T COG4857         181 VFTDPYFDADRNRHTIPQLDPFVEELR---KNRDLKVEAQK----LKHKFMA--YAETLIHGDLHSGSIFVTEKE-TKVI  250 (408)
T ss_pred             eecCccccccccccccccchHHHHHHh---cCcchhhhHHH----HHHHHHH--HhHHHhccccccCcEEeecCc-ceee
Confidence            000100000000    01222222221   11122222222    3333332  355899999999999997654 7899


Q ss_pred             ccc-cccCCchhhhhhh
Q 020294          250 DPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       250 D~~-~~~G~p~~DLa~~  265 (328)
                      |++ ++||+-.+|++++
T Consensus       251 DPEFaFYGPmafDiG~~  267 (408)
T COG4857         251 DPEFAFYGPMAFDIGML  267 (408)
T ss_pred             CccccccCcchhhHHHH
Confidence            985 7899999999986

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=99.27  E-value=5e-10  Score=100.77  Aligned_cols=198  Identities=17%  Similarity=0.167  Sum_probs=106.5

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec-CCC
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE-FGS  133 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~-G~~  133 (328)
                      .+.+++ |.+|.+|++.-++.+.++|....+....+..+.           +. |+++..... .....++.++.. |..
T Consensus        10 ~~~~~~-g~t~~~~~~~~~g~~~~~~r~~~p~~~~~~~~~-----------~~-~~l~~~~~~-~~~~~~~~q~~~~~~~   75 (269)
T COG0510          10 KITPLN-GLTGYAFRIEGEGTRVFLKRNFEPFLPALIFRL-----------IV-PKLLWLKRI-ANGGVLVAQYWENGRT   75 (269)
T ss_pred             eeeecc-CCcceeEEeeCCCCeeeeecCCCcchHHHHHHh-----------hh-hhhhhhccc-ccCCceEEeeeccccc
Confidence            456665 789999999655557777765432211121111           11 333333221 123344444443 333


Q ss_pred             CC---ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHH
Q 020294          134 SR---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR  210 (328)
Q Consensus       134 ~~---~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  210 (328)
                      ++   .....++..|+++|........+...     +      ....+|..+..  ++.........  ....+...+.+
T Consensus        76 l~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~-----~------~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~~~  140 (269)
T COG0510          76 LTPEDMNLKKIAHILKKLHNSVPLLHQLPRS-----G------SSFIEPKDYLE--LLWQQNSRAYR--DNHLLRKKLKE  140 (269)
T ss_pred             cCccccchHHHHHHHHHhcCccchHHHHHhh-----c------chHhhHHHHHH--HHHhhchHHhh--hhHHHHHHHHH
Confidence            32   44577888999999955422111100     0      00123333321  12211111110  01122333444


Q ss_pred             HHHHhhhhccCCCCC-CceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCCh----hhHHHHhhhCC
Q 020294          211 LMKNLAPLFEGVNVE-PCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFGG----SFYNSYFEVMP  283 (328)
Q Consensus       211 ~~~~l~~~l~~~~~~-~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~~~----~f~~~Y~~~~p  283 (328)
                      +...++..    ..+ .++||+|++++|++.++.+...+|||+ ++.+||++|||.+.. ..+..    ..+..|.+..+
T Consensus       141 l~~~l~~~----~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~  216 (269)
T COG0510         141 LRRALEEV----PKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYG  216 (269)
T ss_pred             HHHHhhhc----CCCceeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCC
Confidence            44444432    233 799999999999999886679999995 899999999998754 33332    36666666665


Q ss_pred             CC
Q 020294          284 KQ  285 (328)
Q Consensus       284 l~  285 (328)
                      ..
T Consensus       217 ~~  218 (269)
T COG0510         217 FE  218 (269)
T ss_pred             ch
Confidence            54

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.25  E-value=1.1e-10  Score=100.34  Aligned_cols=134  Identities=18%  Similarity=0.211  Sum_probs=89.6

Q ss_pred             eCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           59 VGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.|..+.+|+....+..+++|......           ...+..|.++++.+... ++++|.++..+.   ...+++||
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~lv~e   77 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDP---DNKTIVME   77 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEEC---CCCEEEEE
Confidence            5678889999998666689999854210           13355799999999875 689999987763   46799999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |++|.++.       +.+..    ..                                ..+                   
T Consensus        78 ~~~g~~l~-------~~~~~----~~--------------------------------~~~-------------------   95 (199)
T TIGR03724        78 YIEGKPLK-------DVIEE----GN--------------------------------DEL-------------------   95 (199)
T ss_pred             EECCccHH-------HHHhh----cH--------------------------------HHH-------------------
Confidence            99997531       11100    00                                000                   


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM  264 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~  264 (328)
                      +.++...+..+     ....++|||++|+||+++ ++...+|||+ +..+++..|.+.
T Consensus        96 ~~~i~~~l~~l-----H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~  147 (199)
T TIGR03724        96 LREIGRLVGKL-----HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAV  147 (199)
T ss_pred             HHHHHHHHHHH-----HHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhc
Confidence            00111111111     124699999999999998 6668999985 568888888764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.25  E-value=1e-10  Score=101.23  Aligned_cols=139  Identities=15%  Similarity=0.129  Sum_probs=91.7

Q ss_pred             eeeCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           57 CPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      +.++.|..+.+|+....++.+++|...+..           ...+..|.+.+..+.+. ++++|.++..+.   +..+++
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~lv   77 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDP---ENFIIV   77 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeC---CCCEEE
Confidence            467889999999998776789999865311           12356788899988864 689999987653   477999


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      |||++|.++.       +.+..    ..                         + ..   ..+.                
T Consensus        78 ~e~~~G~~L~-------~~~~~----~~-------------------------~-~~---~~i~----------------  101 (211)
T PRK14879         78 MEYIEGEPLK-------DLINS----NG-------------------------M-EE---LELS----------------  101 (211)
T ss_pred             EEEeCCcCHH-------HHHHh----cc-------------------------H-HH---HHHH----------------
Confidence            9999997631       11100    00                         0 00   0011                


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM  264 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~  264 (328)
                         ..+...+..+.     ...++|||++|+||+++ ++.+.+|||+ +..+++..|.+.
T Consensus       102 ---~~i~~~l~~lH-----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~  152 (211)
T PRK14879        102 ---REIGRLVGKLH-----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAV  152 (211)
T ss_pred             ---HHHHHHHHHHH-----hCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhc
Confidence               11111111111     24689999999999998 5668999985 567888888774

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=99.21  E-value=2.2e-10  Score=101.36  Aligned_cols=194  Identities=13%  Similarity=0.056  Sum_probs=116.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----CccH---HHHHHHHHHHHhcCCCCC---C
Q 020294           89 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGNQ---SVFGKKLAEMHKAGKSSK---G  157 (328)
Q Consensus        89 ~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----~~~~---~~lg~~La~lH~~~~~~~---~  157 (328)
                      .+..-+++-.+|.+. |+.||+++..+.   ...++++|.+--+..     +...   ...++.|+.+|....+..   .
T Consensus        66 ~v~~Fvai~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~  141 (351)
T COG3178          66 DVRPFVAIAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVR  141 (351)
T ss_pred             hhhHHHHHHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccC
Confidence            344557777888886 899999999985   477999998765432     1333   366788999999887421   1


Q ss_pred             CCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHHHhhC--CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCC
Q 020294          158 FGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLALDQY--GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLW  234 (328)
Q Consensus       158 ~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~  234 (328)
                      .|...     ..|.    .+.  +-.. +..+-..+-.....+  .+.+.++.++++.+.+-.-+.  ..+.++||+|||
T Consensus       142 ~g~~~-----~lp~----fDr--~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~--~~~~vlvhRDfh  208 (351)
T COG3178         142 EGSTH-----VLPP----FDR--AAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL--AQPKVLVHRDFH  208 (351)
T ss_pred             CCCCC-----cCCc----ccH--HHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh--cCCceeeecccc
Confidence            12100     1111    110  0000 001111111111111  233345556666665433222  358899999999


Q ss_pred             CCCeeecCC----CCeEEEcc-ccccCCchhhhhhhhh---cCCC----hhhHHHHhhhCCCCC-CHHHHHHHHHHHHH
Q 020294          235 SGNISSDKN----GEPVILDP-ACYYGHNEAEFGMSWC---AGFG----GSFYNSYFEVMPKQP-GFEKRRDLYMLYHY  300 (328)
Q Consensus       235 ~~Nil~~~~----~~~~iID~-~~~~G~p~~DLa~~~~---~~~~----~~f~~~Y~~~~pl~~-~~~~r~~ly~l~~~  300 (328)
                      +-|+|+..+    ..++|||| ++.+|+..||++.+.-   -.++    ...+.+|.+.++... . ...-.|++-|+.
T Consensus       209 ~~NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~~~g~p-~d~~~Flra~~~  286 (351)
T COG3178         209 SRNLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARRAAGLP-FDEAAFLRAYAW  286 (351)
T ss_pred             CccceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhhhcCCC-cCHHHHHHHHHH
Confidence            999999876    24899998 7999999999998732   3454    357899988875421 1 234455555544

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.17  E-value=6.5e-10  Score=97.19  Aligned_cols=90  Identities=16%  Similarity=0.064  Sum_probs=66.1

Q ss_pred             HHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC---Ccch---------HHHHHHHHHHHHhcCCCCcc
Q 020294           42 EWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSM---------FEGEALGLGAMYETRTIRAP  109 (328)
Q Consensus        42 ~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~---------~~~E~~~l~~L~~~~~v~VP  109 (328)
                      +++... ++.....++.+++|..+.||.++.+.+.+++|..++.   ....         +++|+..+..|.+. ++++|
T Consensus        23 ~~~~~~-l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~  100 (232)
T PRK10359         23 EIFDDF-LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-GLASL  100 (232)
T ss_pred             HHHHHH-hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcc
Confidence            444444 3446777888889999999998887679999998742   1111         57888889999764 89999


Q ss_pred             cceeccccC-----CCceEEEEeeecCCC
Q 020294          110 RPFKVGALP-----TGGSYIIMEFIEFGS  133 (328)
Q Consensus       110 ~~~~~~~~~-----~~~~~~v~e~l~G~~  133 (328)
                      ..+......     ++..+++|||++|.+
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~t  129 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVE  129 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCcc
Confidence            877553321     357899999999975

>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]

Probab=99.12  E-value=3.4e-09  Score=93.89  Aligned_cols=220  Identities=15%  Similarity=0.162  Sum_probs=132.9

Q ss_pred             HHHHHHhcCCCcc--eeeeeeeCCcccceeEEEEeCC---ccEEEEecCCCCcchHH--HHHHHHHHHHhcCCCCcccce
Q 020294           40 IREWILSEGKATH--ITKICPVGGGCINLASRYGTDA---GSFFVKTNRSIGPSMFE--GEALGLGAMYETRTIRAPRPF  112 (328)
Q Consensus        40 i~~~l~~~~~~~~--i~~v~~i~~G~~n~~y~v~~~~---~~~vlK~~~~~~~~~~~--~E~~~l~~L~~~~~v~VP~~~  112 (328)
                      +.++|+..-+.+.  -.+.+..++|.+|..+.+...+   ....+|++.+.+.-.+.  .|+...+.|+..  --.|++|
T Consensus        68 a~eLlk~Lrp~W~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~--G~ap~Ly  145 (391)
T KOG4720|consen   68 ALELLKKLRPHWKPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAY--GFAPKLY  145 (391)
T ss_pred             HHHHHHHhcccCCccceeeeeeccchhHHHHHhhcccccceeEEEEeccCCCceeeccHHHHHHHHHHHHc--CcChhhh
Confidence            5666766534333  3456778999999877766554   36788888764433343  455555677776  3567777


Q ss_pred             eccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH
Q 020294          113 KVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE  185 (328)
Q Consensus       113 ~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~  185 (328)
                      ..-     .-.+++||++|..+.       ..+..+++.+|+||+....    |        ..|...-|.+ ...|+..
T Consensus       146 ~tF-----~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~----g--------~~pkp~lw~k-m~~f~~l  207 (391)
T KOG4720|consen  146 GTF-----NNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT----G--------GNPKPPLWEK-MRKFLQL  207 (391)
T ss_pred             hee-----cCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC----C--------CCCCCcHHHH-HHHHHHh
Confidence            543     237999999999873       4578999999999999873    1        1122222321 1222211


Q ss_pred             h--hhHHHH-HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEEEcc-ccccCCchh
Q 020294          186 H--RLGYQL-KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEA  260 (328)
Q Consensus       186 ~--~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~iID~-~~~~G~p~~  260 (328)
                      .  +..... ++........   +.+.+-+..+.+.+.....+.++||.||=.+||+.++.. .+-+||. .+.+....+
T Consensus       208 v~~~f~de~~kq~~~~~~~~---~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~af  284 (391)
T KOG4720|consen  208 VPTSFEDEINKQNLFDEPSP---EDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAF  284 (391)
T ss_pred             cCchhhcccchhhcccCCCH---HHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhhe
Confidence            0  000000 0000001111   122222333444444435688999999999999998764 4689996 689999999


Q ss_pred             hhhh--hhhcCCC-------------hhhHHHHhhhC
Q 020294          261 EFGM--SWCAGFG-------------GSFYNSYFEVM  282 (328)
Q Consensus       261 DLa~--~~~~~~~-------------~~f~~~Y~~~~  282 (328)
                      |++=  ..++|..             -+|+..|.+..
T Consensus       285 DIgNHFnE~aGv~evDYSlyp~rE~Q~qwl~~YLq~~  321 (391)
T KOG4720|consen  285 DIGNHFNEYAGVEEVDYSLYPTREEQLQWLRDYLQAY  321 (391)
T ss_pred             ehhhhHHhhcCCCccchhcCCCHHHHHHHHHHHHhhc
Confidence            9993  2344432             15788886654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=1.1e-09  Score=91.36  Aligned_cols=154  Identities=19%  Similarity=0.186  Sum_probs=97.7

Q ss_pred             eeCCcccceeEEEEeCCccEEEEecCCC-----C------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           58 PVGGGCINLASRYGTDAGSFFVKTNRSI-----G------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+..|..+.+|...--+.+.|+|.-.+.     .      ......|+.++..+... |+|||.++.++.   ....++|
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~---~~~~I~m   78 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDP---DNGLIVM   78 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcC---CCCEEEE
Confidence            3456777777777554446778764321     1      24456799999999887 899999999985   4779999


Q ss_pred             eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294          127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  206 (328)
Q Consensus       127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  206 (328)
                      ||++|..+..       .|-.   ...                           +..  +++                  
T Consensus        79 e~I~G~~lkd-------~l~~---~~~---------------------------~~~--r~v------------------  101 (204)
T COG3642          79 EYIEGELLKD-------ALEE---ARP---------------------------DLL--REV------------------  101 (204)
T ss_pred             EEeCChhHHH-------HHHh---cch---------------------------HHH--HHH------------------
Confidence            9999974210       0000   000                           000  011                  


Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh----hh--h-c---C---CCh
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM----SW--C-A---G---FGG  272 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~----~~--~-~---~---~~~  272 (328)
                        -+.+.++        ....+|||||.+.|+++.+++ +.+|||. +.+.+-.-|.|+    +.  . +   .   +-.
T Consensus       102 --G~~vg~l--------H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~  170 (204)
T COG3642         102 --GRLVGKL--------HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFA  170 (204)
T ss_pred             --HHHHHHH--------HhcCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHHHHHHHHhccccHHHHHH
Confidence              1122221        134799999999999997665 8999985 456666666663    21  1 1   1   125


Q ss_pred             hhHHHHhhhCC
Q 020294          273 SFYNSYFEVMP  283 (328)
Q Consensus       273 ~f~~~Y~~~~p  283 (328)
                      .|+++|.+...
T Consensus       171 ~f~~gY~~~~~  181 (204)
T COG3642         171 AFLEGYREEFG  181 (204)
T ss_pred             HHHHHHHHHhc
Confidence            78999977654

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.10  E-value=4.6e-09  Score=93.10  Aligned_cols=71  Identities=18%  Similarity=0.123  Sum_probs=54.6

Q ss_pred             CcccceeEEEEeCCccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC---Cc
Q 020294           61 GGCINLASRYGTDAGSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GG  121 (328)
Q Consensus        61 ~G~~n~~y~v~~~~~~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~  121 (328)
                      .|..|++|+|.++++++|||.+...                ....+.+|.+.++.|.+. +++||+++.......   ..
T Consensus        42 ~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~  120 (239)
T PRK01723         42 AKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYR  120 (239)
T ss_pred             CCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeeecCccee
Confidence            6788999999999889999988421                123456799999999876 799999998743322   24


Q ss_pred             eEEEEeeecCC
Q 020294          122 SYIIMEFIEFG  132 (328)
Q Consensus       122 ~~~v~e~l~G~  132 (328)
                      .++|||+++|.
T Consensus       121 ~~lV~e~l~G~  131 (239)
T PRK01723        121 ADILIERIEGA  131 (239)
T ss_pred             eeEEEEecCCC
Confidence            56999999985

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.08  E-value=6.4e-10  Score=97.85  Aligned_cols=136  Identities=21%  Similarity=0.231  Sum_probs=95.5

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCccc
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPR  110 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~v~VP~  110 (328)
                      .+||-|-.+.+|.+.+++| +.++|+.+-.                         ++...++|+++|+.|... |++||+
T Consensus        97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~  175 (304)
T COG0478          97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK  175 (304)
T ss_pred             cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence            4578889999999998865 8999987521                         012246899999999986 799999


Q ss_pred             ceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHH
Q 020294          111 PFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY  190 (328)
Q Consensus       111 ~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~  190 (328)
                      |+..+     ++.++||+++|.++           .++-. ..                       .+         .. 
T Consensus       176 P~~~n-----RHaVvMe~ieG~eL-----------~~~r~-~~-----------------------en---------~~-  205 (304)
T COG0478         176 PIAWN-----RHAVVMEYIEGVEL-----------YRLRL-DV-----------------------EN---------PD-  205 (304)
T ss_pred             ccccc-----cceeeeehccccee-----------ecccC-cc-----------------------cC---------HH-
Confidence            99886     67999999999754           11000 00                       00         00 


Q ss_pred             HHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCchhhhh
Q 020294          191 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNEAEFG  263 (328)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~~DLa  263 (328)
                                     +.++.+++.+....     ..+++||||..-||++++||...+||| .+ ..++|..+.-
T Consensus       206 ---------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~  260 (304)
T COG0478         206 ---------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL  260 (304)
T ss_pred             ---------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH
Confidence                           11222233333222     347999999999999999988999997 65 4788876654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.93  E-value=1.5e-08  Score=91.12  Aligned_cols=66  Identities=23%  Similarity=0.248  Sum_probs=50.0

Q ss_pred             eeEEEEeCCccEEEEecCCCC-------------c-chHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEEe
Q 020294           66 LASRYGTDAGSFFVKTNRSIG-------------P-SMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIME  127 (328)
Q Consensus        66 ~~y~v~~~~~~~vlK~~~~~~-------------~-~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~e  127 (328)
                      .|++++.++..|+||......             + ....+|...+..|.+. ++|||+|+.++...    ....++|+|
T Consensus        37 rvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEe
Confidence            367888777799999775322             0 1367899999999987 89999998876432    235899999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      +++|.
T Consensus       116 ~l~~~  120 (268)
T PRK15123        116 DLAPT  120 (268)
T ss_pred             eCCCC
Confidence            99985

>PRK09902 hypothetical protein; Provisional

Probab=98.91  E-value=1e-07  Score=81.96  Aligned_cols=180  Identities=12%  Similarity=0.096  Sum_probs=112.2

Q ss_pred             hhHHHHHHHhcCCCcceeeeeeeCC--cccceeEEEEeCCccEEEEecCC---------CCcchHHHHHHHHHHHHhcCC
Q 020294           37 DDPIREWILSEGKATHITKICPVGG--GCINLASRYGTDAGSFFVKTNRS---------IGPSMFEGEALGLGAMYETRT  105 (328)
Q Consensus        37 ~~~i~~~l~~~~~~~~i~~v~~i~~--G~~n~~y~v~~~~~~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~  105 (328)
                      .++..+|....+     .-+++...  |..+.|++++.++..|+||...+         -+...+.+|...|+.|.+. +
T Consensus         7 ~~~f~~~w~~~~-----~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~-G   80 (216)
T PRK09902          7 YDEFNHWWATEG-----DWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA-G   80 (216)
T ss_pred             hhhHHHHHhCCC-----ceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc-C
Confidence            456778876542     23444433  67789999998877999998762         2346688999999999997 7


Q ss_pred             CCcccceeccccCC---CceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHH
Q 020294          106 IRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF  182 (328)
Q Consensus       106 v~VP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~  182 (328)
                      +|||+|+..+..+.   -..++|+|.++|-..          |..+-....      ..            .+...    
T Consensus        81 vPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~----------L~~~l~~~~------~~------------~~~~~----  128 (216)
T PRK09902         81 VIVPKIVFGEAVKIEGEWRALLVTEDMAGFIS----------IADWYAQHA------VS------------PYSDE----  128 (216)
T ss_pred             CCCCccceeeeeccCCceEEEEEEEeCCCCcc----------HHHHHhcCC------cC------------CcchH----
Confidence            99999996653321   257899999998643          222211000      00            00000    


Q ss_pred             HHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCC--eEEEcccc------c
Q 020294          183 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE--PVILDPAC------Y  254 (328)
Q Consensus       183 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~--~~iID~~~------~  254 (328)
                      . ...+                ...+.+++.++        ...+++|||+.+.||+++.++.  ..+||++.      .
T Consensus       129 ~-k~~i----------------l~~va~~ia~L--------H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~  183 (216)
T PRK09902        129 V-RQAM----------------LKAVALAFKKM--------HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRR  183 (216)
T ss_pred             H-HHHH----------------HHHHHHHHHHH--------HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhh
Confidence            0 0001                01122223222        2458999999999999986665  78999753      2


Q ss_pred             cCCchhhhhhhh-h-cCCCh----hhHHHHh
Q 020294          255 YGHNEAEFGMSW-C-AGFGG----SFYNSYF  279 (328)
Q Consensus       255 ~G~p~~DLa~~~-~-~~~~~----~f~~~Y~  279 (328)
                      .-...-||..+. - .+|++    .|+.+|.
T Consensus       184 ~~~~~~Dl~~l~r~~~~~s~~~~~~~~~~y~  214 (216)
T PRK09902        184 DKAINHDFRQLEKYLEPIPKADWEQVKAYYY  214 (216)
T ss_pred             hhhhHhHHHHHHHhccCCCHHHHHHHHHHHh
Confidence            355677888664 2 45663    4677775

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.90  E-value=8.6e-09  Score=101.99  Aligned_cols=159  Identities=16%  Similarity=0.156  Sum_probs=99.8

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.++.|.+..||+....++..++|....     .      ....+..|+++++.+... ++++|.++..+.   ...++
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~l  413 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDP---EEKTI  413 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeC---CCCEE
Confidence            46689999999999776665555554321     1      023467899999999765 577777776653   46799


Q ss_pred             EEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHH
Q 020294          125 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI  204 (328)
Q Consensus       125 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~  204 (328)
                      +|||++|.++..       .+.   .  .                                ..+                
T Consensus       414 v~E~~~g~~L~~-------~l~---~--~--------------------------------~~~----------------  433 (535)
T PRK09605        414 VMEYIGGKDLKD-------VLE---G--N--------------------------------PEL----------------  433 (535)
T ss_pred             EEEecCCCcHHH-------HHH---H--H--------------------------------HHH----------------
Confidence            999999975311       110   0  0                                000                


Q ss_pred             HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh------hcC-------C
Q 020294          205 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW------CAG-------F  270 (328)
Q Consensus       205 ~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~------~~~-------~  270 (328)
                         +.++.+.+..+.     ...++|||++|.|||++ ++.+.||||+ +..+++..|++..+      +.+       .
T Consensus       434 ---~~~i~~~L~~lH-----~~giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~  504 (535)
T PRK09605        434 ---VRKVGEIVAKLH-----KAGIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEEL  504 (535)
T ss_pred             ---HHHHHHHHHHHH-----hCCCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHH
Confidence               011111111111     24699999999999994 5568999995 56899999988632      111       1


Q ss_pred             ChhhHHHHhhhCCCCCCH
Q 020294          271 GGSFYNSYFEVMPKQPGF  288 (328)
Q Consensus       271 ~~~f~~~Y~~~~pl~~~~  288 (328)
                      -+.|+++|... +..+.+
T Consensus       505 ~~~fl~gY~~~-~~~~~~  521 (535)
T PRK09605        505 WEAFLEGYRET-EGAEDV  521 (535)
T ss_pred             HHHHHHhhccC-ccHHHH
Confidence            14688999765 433333

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.90  E-value=1.6e-08  Score=97.32  Aligned_cols=96  Identities=17%  Similarity=0.095  Sum_probs=65.6

Q ss_pred             CChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCCcch------------------
Q 020294           35 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSM------------------   89 (328)
Q Consensus        35 ~~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~------------------   89 (328)
                      ++.+++++.|.+. +|..+      .+-+|++.|..+.||+.++.+| .++||+-++.-...                  
T Consensus        96 ~~~~~~~~~l~~e-lg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~  174 (437)
T TIGR01982        96 FDFKVARKVIEAA-LGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERL  174 (437)
T ss_pred             CCHHHHHHHHHHH-hCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            6777888888776 33222      2236899999999999998766 89999986532112                  


Q ss_pred             -------------------------HHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           90 -------------------------FEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        90 -------------------------~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                                               +..|++.+..+++    ...+.||+++....   +..+++|||++|.++
T Consensus       175 ~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~L  245 (437)
T TIGR01982       175 SPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIPL  245 (437)
T ss_pred             CccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCccc
Confidence                                     2234444444432    23578999986543   467999999999875

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.87  E-value=4.3e-08  Score=83.74  Aligned_cols=71  Identities=23%  Similarity=0.260  Sum_probs=53.2

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCCc-----------------------------chHHHHHHHHHHHHhcCCC
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-----------------------------SMFEGEALGLGAMYETRTI  106 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~-----------------------------~~~~~E~~~l~~L~~~~~v  106 (328)
                      .+++.|....||+....+| .+++|+.+....                             ...+.|++.+..+... ++
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i   81 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV   81 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            4688899999999987655 889998764210                             1135688888888875 68


Q ss_pred             CcccceeccccCCCceEEEEeeecCCC
Q 020294          107 RAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       107 ~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ++|.++...     ..+++|||++|..
T Consensus        82 ~~p~~~~~~-----~~~lVmE~~~g~~  103 (190)
T cd05145          82 PVPEPILLK-----KNVLVMEFIGDDG  103 (190)
T ss_pred             CCceEEEec-----CCEEEEEEecCCC
Confidence            899988664     2499999999973

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.84  E-value=1.4e-08  Score=86.48  Aligned_cols=38  Identities=26%  Similarity=0.461  Sum_probs=27.4

Q ss_pred             HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec--CCC
Q 020294           90 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGS  133 (328)
Q Consensus        90 ~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~--G~~  133 (328)
                      .++|++.|+.+.+. |++||+|+...     ..++|||||+  |.+
T Consensus        55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~-----~~~ivME~I~~~G~~   94 (188)
T PF01163_consen   55 AKKEFRNLKRLYEA-GVPVPKPYDYN-----RNVIVMEYIGEDGVP   94 (188)
T ss_dssp             HHHHHHHHHHCCCT-T-SS--EEEEE-----TTEEEEE--EETTEE
T ss_pred             HHHHHHHHHHHHHC-CccCCcEEEEe-----CCEEEEEecCCCccc
Confidence            56899999999886 79999999886     4599999999  654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.83  E-value=3.1e-08  Score=84.67  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           91 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        91 ~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ++|++.|+.+.+. |+|||+|+...     ..+++|||+.|..
T Consensus        74 ~kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~~  110 (197)
T cd05146          74 EKEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDDQ  110 (197)
T ss_pred             HHHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCCC
Confidence            3899999999997 79999999874     5699999998863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.79  E-value=5.7e-08  Score=83.08  Aligned_cols=71  Identities=20%  Similarity=0.163  Sum_probs=51.6

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCC---c---------c-----------------hHHHHHHHHHHHHhcCCC
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---P---------S-----------------MFEGEALGLGAMYETRTI  106 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~---------~-----------------~~~~E~~~l~~L~~~~~v  106 (328)
                      ..+|.|....||+....+| .+++|+.+...   .         .                 ....|++.++.|... ++
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v   81 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI   81 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            3578899999999987655 89999875321   0         1                 123489999999875 67


Q ss_pred             CcccceeccccCCCceEEEEeeecCCC
Q 020294          107 RAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       107 ~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ++|.++...     ..++||||++|..
T Consensus        82 ~~p~~~~~~-----~~~iVmE~i~g~~  103 (190)
T cd05147          82 PCPEPILLK-----SHVLVMEFIGDDG  103 (190)
T ss_pred             CCCcEEEec-----CCEEEEEEeCCCC
Confidence            888877543     3499999999964

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.73  E-value=3.8e-07  Score=76.06  Aligned_cols=75  Identities=24%  Similarity=0.163  Sum_probs=58.7

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      +++.+..|....+++.......+++|--.+     +      +......|++.|..+... |+++|+++..+.   ....
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDT---YGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEec---CCCe
Confidence            677788889888888887777888875432     1      234567899999988876 899999999885   4789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +.|||++|-.
T Consensus        87 i~ME~~~g~~   96 (229)
T KOG3087|consen   87 IYMEFIDGAS   96 (229)
T ss_pred             EEEEeccchh
Confidence            9999999953

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.70  E-value=2.9e-07  Score=80.50  Aligned_cols=136  Identities=24%  Similarity=0.267  Sum_probs=88.1

Q ss_pred             eeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------------cchHHHHHHHHHHHHhcCCCCcc
Q 020294           58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------------PSMFEGEALGLGAMYETRTIRAP  109 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------------~~~~~~E~~~l~~L~~~~~v~VP  109 (328)
                      .++.|-...||+-.+.++ .+.+|++....                           ....++|+.-|..+++. |++||
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GVrvP  133 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GVRVP  133 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCC
Confidence            567888889999777655 77889885310                           02246899999999997 79999


Q ss_pred             cceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhH
Q 020294          110 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG  189 (328)
Q Consensus       110 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~  189 (328)
                      +|+..-.     ..++||+|.....                 ++         |... ..+..+   +.           
T Consensus       134 ~Pi~~~~-----nVLvMEfIg~~g~-----------------pA---------P~Lk-Dv~~e~---~e-----------  167 (268)
T COG1718         134 EPIAFRN-----NVLVMEFIGDDGL-----------------PA---------PRLK-DVPLEL---EE-----------  167 (268)
T ss_pred             CceeecC-----CeEEEEeccCCCC-----------------CC---------CCcc-cCCcCc---hh-----------
Confidence            9998763     4999999977521                 11         1000 000000   00           


Q ss_pred             HHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCch
Q 020294          190 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNE  259 (328)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~  259 (328)
                                    .....+.+++.+..++.    ...|+||||..-|||++ ++.++|||+ .+ ...||.
T Consensus       168 --------------~~~~~~~~v~~~~~l~~----~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~  220 (268)
T COG1718         168 --------------AEGLYEDVVEYMRRLYK----EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN  220 (268)
T ss_pred             --------------HHHHHHHHHHHHHHHHH----hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence                          01223334444444443    35899999999999998 556999996 55 366664

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.68  E-value=3.2e-07  Score=78.79  Aligned_cols=73  Identities=21%  Similarity=0.163  Sum_probs=53.4

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCCC-------------------------cchHHHHHHHHHHHHhcCCCCcc
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------------PSMFEGEALGLGAMYETRTIRAP  109 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~-------------------------~~~~~~E~~~l~~L~~~~~v~VP  109 (328)
                      .++++.|....+|+....+| .+++|+.+...                         ......|...+..+... ++++|
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~   98 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP   98 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence            46688999999999987555 88999754210                         01245688888888764 57899


Q ss_pred             cceeccccCCCceEEEEeeecCCCC
Q 020294          110 RPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       110 ~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .++..+     ..+++|||++|.++
T Consensus        99 ~~~~~~-----~~~lv~e~~~g~~L  118 (198)
T cd05144          99 KPIDWN-----RHAVVMEYIDGVEL  118 (198)
T ss_pred             ceeecC-----CceEEEEEeCCcch
Confidence            988643     45999999999753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=98.68  E-value=3.2e-07  Score=81.23  Aligned_cols=90  Identities=20%  Similarity=0.164  Sum_probs=62.8

Q ss_pred             ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEE--eCCc-cEEEEecCCCCc-------------------------
Q 020294           36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYG--TDAG-SFFVKTNRSIGP-------------------------   87 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~--~~~~-~~vlK~~~~~~~-------------------------   87 (328)
                      +-.++-.|++ .|....+.  ++++.|....+|+..  ..+| .+++|+.+....                         
T Consensus        16 ~~~~~~~~~~-~~~~~~i~--~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (237)
T smart00090       16 TRLALYSLLN-RGILSAIG--GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKL   92 (237)
T ss_pred             HHHHHHHHHh-cCchHHhC--CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHH
Confidence            4445556664 23333444  468899999999997  3444 888998753210                         


Q ss_pred             --chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           88 --SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        88 --~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                        ..++.|++.++.|... ++.+|+++..+     ..++||||++|..+
T Consensus        93 ~~~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L  135 (237)
T smart00090       93 VRLWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL  135 (237)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence              1246799999999864 68899999754     35899999999754

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=98.65  E-value=7.7e-08  Score=82.68  Aligned_cols=58  Identities=22%  Similarity=0.417  Sum_probs=43.5

Q ss_pred             CCCceeccCCCCCCeeecCCC-----CeEEEccc-cccCCchhhhhhhhhcCCC--------hhhHHHHhhh
Q 020294          224 VEPCLLHGDLWSGNISSDKNG-----EPVILDPA-CYYGHNEAEFGMSWCAGFG--------GSFYNSYFEV  281 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~~~~~-----~~~iID~~-~~~G~p~~DLa~~~~~~~~--------~~f~~~Y~~~  281 (328)
                      ...+|||||+|++|+++..++     .+.+|||+ +.+|+|.+||+.+.+....        +.+++.|.+.
T Consensus       118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~~  189 (196)
T smart00587      118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYET  189 (196)
T ss_pred             CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            367999999999999998543     46899985 6899999999976432221        3567777643

subfamily of choline kinases

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.65  E-value=2.1e-07  Score=80.63  Aligned_cols=45  Identities=27%  Similarity=0.252  Sum_probs=36.5

Q ss_pred             cchHHHHHHHHHHHHhcCCCCcccceeccccCC---CceEEEEeeecCC
Q 020294           87 PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFG  132 (328)
Q Consensus        87 ~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~~~~v~e~l~G~  132 (328)
                      .....+|...+..|.+. ++|||+|++++....   ...++|+|+++|.
T Consensus        55 ~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~  102 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGA  102 (206)
T ss_pred             chHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCc
Confidence            34577899999999986 899999999886532   2568999999985

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase

Probab=98.63  E-value=1.8e-07  Score=91.27  Aligned_cols=195  Identities=15%  Similarity=0.155  Sum_probs=109.8

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--CCC---ceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTG---GSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~~~---~~~~v~e~l  129 (328)
                      +++.+++.++|+...+   ++++|+|+++.-.. -..=|+++.++|.+.+.-.||.++..-..  .++   .-.++.+|+
T Consensus       169 ~~r~l~~EQSNtSi~~---g~~~ilKlyRrl~~-G~nPe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV  244 (528)
T TIGR02457       169 EVRLLSAEQSNSSLVV---GDRVVLKLYRKVEP-GINPEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYV  244 (528)
T ss_pred             ceeecCCCcCceEEEE---CCEEEEEEecccCC-CCCcchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhh
Confidence            3566677788877776   35899999985211 11135778899988543479999876432  123   335666999


Q ss_pred             cCCCC---------C-------------------------ccHHHHHHHHHHHHhcCCCCC---CCCCCCCCcccccccC
Q 020294          130 EFGSS---------R-------------------------GNQSVFGKKLAEMHKAGKSSK---GFGFDVDNTIGSTPQI  172 (328)
Q Consensus       130 ~G~~~---------~-------------------------~~~~~lg~~La~lH~~~~~~~---~~g~~~~~~~g~~~~~  172 (328)
                      ++..-         .                         ..+..||+.+|+||.+....+   .|+.        .|..
T Consensus       245 ~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~p--------ep~~  316 (528)
T TIGR02457       245 QNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAP--------EPIS  316 (528)
T ss_pred             CCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--------CCCC
Confidence            87531         0                         015679999999999887431   2321        1111


Q ss_pred             CCCcccHHHHHHHhhhHHHHHHHHhh--CCChHHH-------HHHHHHHHHhhhhccCCCCCCce---eccCCCCCCeee
Q 020294          173 NKWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIY-------QRGHRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISS  240 (328)
Q Consensus       173 ~~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~L---iHgDl~~~Nil~  240 (328)
                      ......|.+-.. .++...++.+...  ..+.+..       ..-+++.+++..+...  ...++   ||||+|.||||+
T Consensus       317 ~~~~~~~~~~~~-~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~--~~~~~k~RiHGD~HLgqvL~  393 (528)
T TIGR02457       317 TLYQRSWYQDMR-AQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVKR--EIDGLKIRIHGDFHLGQVLV  393 (528)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhhc--CCCcceEeEecCcchhcEEE
Confidence            111123332222 1222222222111  1222222       2222333333333332  23445   999999999999


Q ss_pred             cCCCCeEEEcccc----------ccCCchhhhh-hh
Q 020294          241 DKNGEPVILDPAC----------YYGHNEAEFG-MS  265 (328)
Q Consensus       241 ~~~~~~~iID~~~----------~~G~p~~DLa-~~  265 (328)
                      .+++ ..||||+.          .--.|.-|+| |+
T Consensus       394 t~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGML  428 (528)
T TIGR02457       394 VQDD-AVLIDFEGEPARPLAERRAKRSPLRDVAGML  428 (528)
T ss_pred             eCCC-eEEEcCCCCCCCChHHhccCCChHHHHHHHH
Confidence            8776 56999742          2367999998 55

Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.61  E-value=1.9e-07  Score=91.49  Aligned_cols=97  Identities=15%  Similarity=0.072  Sum_probs=66.0

Q ss_pred             CChhHHHHHHHhc-CCCc-ce---eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCCc--------------------
Q 020294           35 LSDDPIREWILSE-GKAT-HI---TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP--------------------   87 (328)
Q Consensus        35 ~~~~~i~~~l~~~-~~~~-~i---~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~~--------------------   87 (328)
                      ++.+++++.+.+. |... ++   .+.+|++.|....||+.+..+ | .++||+-++.-.                    
T Consensus        98 ~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~  177 (537)
T PRK04750         98 FDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERL  177 (537)
T ss_pred             CCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHh
Confidence            6777788888766 3211 11   234789999999999999865 5 799998864210                    


Q ss_pred             -----------------------chHHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           88 -----------------------SMFEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        88 -----------------------~~~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                                             -.+..|++.+..+++    ...+.||++|+.-.   +..+++|||++|.++
T Consensus       178 ~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~l  248 (537)
T PRK04750        178 LPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---SETVMVMERMYGIPV  248 (537)
T ss_pred             CcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---CCceEEEeeecCccH
Confidence                                   013345555555542    23578999997653   478999999999864

>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]

Probab=98.59  E-value=6.8e-07  Score=81.87  Aligned_cols=184  Identities=20%  Similarity=0.092  Sum_probs=112.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc---------cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~---------~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...+++.+++|..|.+|.++....         ++.||++.... ......|..++..|+.+  ---|+++..=..    
T Consensus        41 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~lSer--~lGPkL~G~F~~----  114 (366)
T KOG2686|consen   41 EEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAILSER--GLGPKLYGFFSG----  114 (366)
T ss_pred             hhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHHHhhc--CCCcceeeecCC----
Confidence            345788899999999999987532         58999997532 23455788888889886  356777765321    


Q ss_pred             eEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294          122 SYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL  194 (328)
Q Consensus       122 ~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~  194 (328)
                       .-+-+|++.+++.       .....+|..++++|....+.+   ..           .  ...|.      ++..++..
T Consensus       115 -GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~---ke-----------~--~~~~~------~~~~wl~~  171 (366)
T KOG2686|consen  115 -GRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGP---KE-----------P--RSLWE------RYKKWLKG  171 (366)
T ss_pred             -ccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCC---cc-----------H--HHHHH------HHHHHHhh
Confidence             3345677766552       345789999999999887311   00           0  00111      12222222


Q ss_pred             HHhh---------CCC-hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEEEcc-ccccCCchhhh
Q 020294          195 ALDQ---------YGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEAEF  262 (328)
Q Consensus       195 ~~~~---------~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~iID~-~~~~G~p~~DL  262 (328)
                      +...         ..+ .+... ....++....+.+..+.+.++||.|+..||||+.+.. ...+||| .+.+.+..+||
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~-l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDl  250 (366)
T KOG2686|consen  172 AKKIKPTEVSYSCGPDKLEIED-LLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDL  250 (366)
T ss_pred             hhhcCCCccchhcccchhhHHH-HHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhH
Confidence            2111         000 00111 1111222333332113568999999999999998654 4799998 58999999999


Q ss_pred             hhh
Q 020294          263 GMS  265 (328)
Q Consensus       263 a~~  265 (328)
                      |.=
T Consensus       251 anH  253 (366)
T KOG2686|consen  251 ANH  253 (366)
T ss_pred             HHH
Confidence            963

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.55  E-value=1.1e-06  Score=74.31  Aligned_cols=71  Identities=24%  Similarity=0.269  Sum_probs=51.4

Q ss_pred             eeeCCcccceeEEEEeCC-ccEEEEecCCCC-----cch----------------------HHHHHHHHHHHHhcCCCCc
Q 020294           57 CPVGGGCINLASRYGTDA-GSFFVKTNRSIG-----PSM----------------------FEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~~-----~~~----------------------~~~E~~~l~~L~~~~~v~V  108 (328)
                      ..++.|..+.+|+....+ ..+++|+.++..     ...                      ...|.+.+..+... ++++
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~   81 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV   81 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence            357888999999988764 489999865321     111                      13567777777765 6889


Q ss_pred             ccceeccccCCCceEEEEeeecCCC
Q 020294          109 PRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       109 P~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      |+++...     ..+++|||++|+.
T Consensus        82 ~~~~~~~-----~~~lv~e~~~g~~  101 (187)
T cd05119          82 PKPIDLN-----RHVLVMEFIGGDG  101 (187)
T ss_pred             CceEecC-----CCEEEEEEeCCCC
Confidence            9998764     4599999999975

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.54  E-value=1.2e-06  Score=75.54  Aligned_cols=71  Identities=14%  Similarity=0.084  Sum_probs=52.5

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCC-------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|..+++|.+..++.+++.|--....       ..++++|+++|+.|.+.  ..+|+++.++     ..+++|+|
T Consensus         7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~--~~vP~ll~~~-----~~~lvmey   79 (218)
T PRK12274          7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL--PRTPRLLHWD-----GRHLDRSY   79 (218)
T ss_pred             ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC--CCCCEEEEEc-----CEEEEEee
Confidence            4567788899999887777788755443211       12578899999999763  5689998764     46999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|..
T Consensus        80 I~G~~   84 (218)
T PRK12274         80 LAGAA   84 (218)
T ss_pred             ecCcc
Confidence            99975

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.52  E-value=7.8e-07  Score=86.68  Aligned_cols=96  Identities=19%  Similarity=0.153  Sum_probs=68.5

Q ss_pred             CChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------
Q 020294           35 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------   86 (328)
Q Consensus        35 ~~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------   86 (328)
                      .+.+++++.+.+. +|..+      .+-+|++.+....||+-+..+| .++||+.++.-                     
T Consensus       104 ~~~~~~~~iie~e-LG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~  182 (517)
T COG0661         104 FPFEEAERIIEEE-LGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRL  182 (517)
T ss_pred             CCHHHHHHHHHHH-hCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHc
Confidence            5778888888877 33222      2357788888999999999876 88999987520                     


Q ss_pred             -c---------------------chHHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           87 -P---------------------SMFEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        87 -~---------------------~~~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                       +                     -.+..|++.++.+++    ...+.||+||+--+   +..+++|||++|.+.
T Consensus       183 ~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t---~~~VLtmE~i~Gi~i  253 (517)
T COG0661         183 PPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYT---TRRVLTMEWIDGIKI  253 (517)
T ss_pred             CCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhcc---CCcEEEEEeeCCEec
Confidence             0                     013456666665553    34688999998653   577999999999864

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=98.48  E-value=1.6e-07  Score=84.93  Aligned_cols=131  Identities=21%  Similarity=0.238  Sum_probs=88.3

Q ss_pred             eCCcccceeEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCcccce
Q 020294           59 VGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPRPF  112 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~v~VP~~~  112 (328)
                      ||-|-.+.+|.+...+| .+++|+.+-.                         ++-...+|++.++.|.++ ++|||+|+
T Consensus       100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~-gfpVPkpi  178 (465)
T KOG2268|consen  100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER-GFPVPKPI  178 (465)
T ss_pred             cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-CCCCCCcc
Confidence            46677889999988766 8888876410                         011235799999999998 79999999


Q ss_pred             eccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHH
Q 020294          113 KVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL  192 (328)
Q Consensus       113 ~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~  192 (328)
                      ..+     ++++|||.+.|-++           .++|....+                         ..           
T Consensus       179 D~~-----RH~Vvmelv~g~Pl-----------~~v~~v~d~-------------------------~~-----------  206 (465)
T KOG2268|consen  179 DHN-----RHCVVMELVDGYPL-----------RQVRHVEDP-------------------------PT-----------  206 (465)
T ss_pred             ccc-----ceeeHHHhhcccce-----------eeeeecCCh-------------------------HH-----------
Confidence            876     67999999999763           333333220                         00           


Q ss_pred             HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCchhh
Q 020294          193 KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNEAE  261 (328)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~~D  261 (328)
                                    ..+.++..+..+ .    ..++|||||.--|||+++++...+||| .+ ...||-.+
T Consensus       207 --------------ly~~lm~~Iv~l-a----~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~  258 (465)
T KOG2268|consen  207 --------------LYDDLMGLIVRL-A----NHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAE  258 (465)
T ss_pred             --------------HHHHHHHHHHHH-H----HcCceecccchheeEEecCCCEEEeechHhhccCCCccc
Confidence                          011111111111 1    248999999999999998887899995 54 45555433

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.46  E-value=3.1e-06  Score=73.23  Aligned_cols=94  Identities=14%  Similarity=0.029  Sum_probs=55.4

Q ss_pred             HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCc------------chHHHHHHHHHHHHhcCCC
Q 020294           39 PIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP------------SMFEGEALGLGAMYETRTI  106 (328)
Q Consensus        39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~------------~~~~~E~~~l~~L~~~~~v  106 (328)
                      .-.+++... ++....-++-+.+..-|.|.+++++.+.||+|.+++..+            +...++..-+..+.+. |+
T Consensus        20 ~y~~l~~~i-~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~-g~   97 (229)
T PF06176_consen   20 KYLELGEKI-LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE-GF   97 (229)
T ss_pred             HHHHHHHHH-HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc-Cc
Confidence            334444443 222444455566667889999999999999999976321            1123344444555554 56


Q ss_pred             Ccccce-eccccC----CCceEEEEeeecCCCC
Q 020294          107 RAPRPF-KVGALP----TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       107 ~VP~~~-~~~~~~----~~~~~~v~e~l~G~~~  134 (328)
                      ..|..+ ....-.    ....+++|||++|.++
T Consensus        98 ~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l  130 (229)
T PF06176_consen   98 TEPADPYLAAEKKIFRYTSSYVLLMEYIEGVEL  130 (229)
T ss_pred             cccccceeeeeeeeccceeEEEEEEEEecCeec
Confidence            555442 221111    2355789999999864

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.40  E-value=4.4e-06  Score=70.50  Aligned_cols=71  Identities=17%  Similarity=0.124  Sum_probs=54.7

Q ss_pred             eCCcccceeEEEEeC--CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           59 VGGGCINLASRYGTD--AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++.|..+.+|++...  +..+++|.......    ..+.+|.+.++.+.+   ..+|+++..... .+..++++|+++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCC
Confidence            467888999999987  45899999976433    567889988888865   467777766554 36889999999986


Q ss_pred             C
Q 020294          133 S  133 (328)
Q Consensus       133 ~  133 (328)
                      +
T Consensus        77 ~   77 (215)
T cd00180          77 S   77 (215)
T ss_pred             c
Confidence            4

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.39  E-value=2.5e-06  Score=81.20  Aligned_cols=138  Identities=16%  Similarity=0.190  Sum_probs=89.1

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-+..||.|....||.++-. .| -|.+|+-...      +..-+.+|..+|..   ..+--|.++|+.-.+ ...-|+
T Consensus       143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~---~ds~~vVKLyYsFQD-~~~LYL  218 (550)
T KOG0605|consen  143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE---VDSPWVVKLYYSFQD-KEYLYL  218 (550)
T ss_pred             chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh---cCCCcEEEEEEEecC-CCeeEE
Confidence            345778999999999999864 45 5667876532      22345566666554   224457777765433 467899


Q ss_pred             EEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHH
Q 020294          125 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI  204 (328)
Q Consensus       125 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~  204 (328)
                      ||||++|+.       ++..|-+.-.                        ..++|..||..+.+.               
T Consensus       219 iMEylPGGD-------~mTLL~~~~~------------------------L~e~~arfYiaE~vl---------------  252 (550)
T KOG0605|consen  219 IMEYLPGGD-------MMTLLMRKDT------------------------LTEDWARFYIAETVL---------------  252 (550)
T ss_pred             EEEecCCcc-------HHHHHHhcCc------------------------CchHHHHHHHHHHHH---------------
Confidence            999999984       3333332111                        124677777542110               


Q ss_pred             HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccc
Q 020294          205 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY  254 (328)
Q Consensus       205 ~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~  254 (328)
                            .++.+        ...+.||.|++|+|+|+|..|..-+-||+.+
T Consensus       253 ------AI~~i--------H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs  288 (550)
T KOG0605|consen  253 ------AIESI--------HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLS  288 (550)
T ss_pred             ------HHHHH--------HHcCcccccCChhheeecCCCCEeecccccc
Confidence                  11111        2357999999999999999998889898644

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.32  E-value=3.7e-06  Score=80.19  Aligned_cols=133  Identities=20%  Similarity=0.234  Sum_probs=89.3

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +-+|.|..++||+.+..  +..|.+|+....      ....+..|-.+|..|.++.  -+-++|..-.+ +..-|+|+||
T Consensus        79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~  155 (604)
T KOG0592|consen   79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEY  155 (604)
T ss_pred             heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEe
Confidence            34689999999998763  247888887531      2345678899999998642  24455554332 4688999999


Q ss_pred             ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294          129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  208 (328)
Q Consensus       129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  208 (328)
                      .+++.+          |.-|++...    |.                 +.|.-||+.+                      
T Consensus       156 A~nGdl----------l~~i~K~Gs----fd-----------------e~caR~YAAe----------------------  182 (604)
T KOG0592|consen  156 APNGDL----------LDLIKKYGS----FD-----------------ETCARFYAAE----------------------  182 (604)
T ss_pred             cCCCcH----------HHHHHHhCc----ch-----------------HHHHHHHHHH----------------------
Confidence            999854          555666543    21                 2344455431                      


Q ss_pred             HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                        +++.+. ++    ...++||+|++|+|||+|+|+..-|=||+
T Consensus       183 --IldAle-yl----H~~GIIHRDlKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  183 --ILDALE-YL----HSNGIIHRDLKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             --HHHHHH-HH----HhcCceeccCChhheeEcCCCcEEEeecc
Confidence              222222 11    24589999999999999999988888875

>PRK14705 glycogen branching enzyme; Provisional

Probab=98.30  E-value=2.9e-05  Score=82.28  Aligned_cols=251  Identities=16%  Similarity=0.063  Sum_probs=135.1

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--------CCC-------
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------PTG-------  120 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--------~~~-------  120 (328)
                      ++.+++-++|+...+...+.+++||+++.-.+ -..=|+++.++|.+.+.-.||.++..-..        .++       
T Consensus       149 ~r~l~~EQSNTSvi~gd~~~~~ilKlfRrl~~-G~NPdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~  227 (1224)
T PRK14705        149 VKVLSGEQSNTSVIVDDGDSAAIVKFFRVLSA-GKNPEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTG  227 (1224)
T ss_pred             ccccccccCceEEEECCCCccEEEEEeeecCC-CCCccHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCce
Confidence            34566667888776643234899999985211 11124777889988544479999876322        111       


Q ss_pred             ceEEEEeeecCCCC------C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH
Q 020294          121 GSYIIMEFIEFGSS------R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE  185 (328)
Q Consensus       121 ~~~~v~e~l~G~~~------~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~  185 (328)
                      .-.++.+|+++..-      .         ..++.||+.+|+||.+.+..  ++-  +...        ....+   .. 
T Consensus       228 tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~--~~~--~~f~--------~~~~~---~~-  291 (1224)
T PRK14705        228 ELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAET--LGT--HDGQ--------EQGPD---IA-  291 (1224)
T ss_pred             eHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC--CCC--cccc--------cCHHH---HH-
Confidence            23567799987642      0         23678999999999998743  111  1000        00000   00 


Q ss_pred             hhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-----CeEEEccc--c-----
Q 020294          186 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDPA--C-----  253 (328)
Q Consensus       186 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-----~~~iID~~--~-----  253 (328)
                      ..+...++.... ...+++...-+++.+++..+.........=||||||.|.||+.++.     .-.||||+  .     
T Consensus       292 ~~~~~rL~~~~~-~~~~~~~~~~~~l~~~~~~l~~~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~  370 (1224)
T PRK14705        292 AGVARRVRGSWA-EAGPAVGPYDHALDELLSALDGRNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPID  370 (1224)
T ss_pred             HHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHhccCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChh
Confidence            011111111111 1122222333334444333322112355789999999999997432     25899974  2     


Q ss_pred             ---ccCCchhhhh-hhh---hc------C---------C----ChhhHHHHhhhCC-CCCCHHHHHHHHHHHHHHHH---
Q 020294          254 ---YYGHNEAEFG-MSW---CA------G---------F----GGSFYNSYFEVMP-KQPGFEKRRDLYMLYHYLNH---  303 (328)
Q Consensus       254 ---~~G~p~~DLa-~~~---~~------~---------~----~~~f~~~Y~~~~p-l~~~~~~r~~ly~l~~~l~~---  303 (328)
                         .-..|.-|+| |+.   ++      .         |    ..+|+++|.+..+ ..+.....+.+|.|-.++-.   
T Consensus       371 ERR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~Y  450 (1224)
T PRK14705        371 ERNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVY  450 (1224)
T ss_pred             hhccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHH
Confidence               2377999998 552   11      0         1    1469999998763 33333334455554433211   


Q ss_pred             HHHhccCcHHHHHHHHHHHHH
Q 020294          304 YNLFGSGYRSSALSIIDDYLR  324 (328)
Q Consensus       304 ~~~~~~~y~~~~~~~~~~~~~  324 (328)
                      =...-+.+...-.+.+.+++.
T Consensus       451 E~~nRP~Wv~IPL~gi~rll~  471 (1224)
T PRK14705        451 ELRNRPDWLSIPVNASRRLLD  471 (1224)
T ss_pred             HHHcCCcchHhHHHHHHHHHh
Confidence            112235665555555555553

>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.24  E-value=4.1e-06  Score=74.15  Aligned_cols=99  Identities=20%  Similarity=0.198  Sum_probs=68.0

Q ss_pred             HHHHHHHHhhhhccCC--CCCCceeccCCCCCCeeecCCCCeEEEc---c-cc-ccCCchhhhhhhh----hcCC---Ch
Q 020294          207 RGHRLMKNLAPLFEGV--NVEPCLLHGDLWSGNISSDKNGEPVILD---P-AC-YYGHNEAEFGMSW----CAGF---GG  272 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~--~~~~~LiHgDl~~~Nil~~~~~~~~iID---~-~~-~~G~p~~DLa~~~----~~~~---~~  272 (328)
                      ..++..++...+|...  ....+=||||||.+||.+-+ +++.++|   | +. .+.|..+|++.+.    +-+.   ..
T Consensus       188 ~t~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~d-g~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~  266 (337)
T COG2187         188 MTEEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLWD-GEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLAR  266 (337)
T ss_pred             HHHHHHHhhhHHHHHHHhcCCceecccchhhcceeeec-CcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHH
Confidence            3344444444444432  24557899999999999954 5589999   4 34 4999999999762    3343   35


Q ss_pred             hhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 020294          273 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF  307 (328)
Q Consensus       273 ~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~  307 (328)
                      .|++.|....+= ....+.+++|.-+...++.-..
T Consensus       267 ~~ln~Yl~~tgD-~~gl~lLpfyla~rA~VRakV~  300 (337)
T COG2187         267 RFLNTYLEETGD-WDGLELLPFYLAYRAYVRAKVT  300 (337)
T ss_pred             HHHHHHHHHhCC-ccHHHHhHHHHHHHHHHHHhee
Confidence            799999877642 2336788999988887776644

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.21  E-value=1.5e-05  Score=74.90  Aligned_cols=72  Identities=13%  Similarity=0.025  Sum_probs=50.4

Q ss_pred             eeeeCCcccceeEEEEeC--Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD--AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|....||+....  ++ .+.+|.....        ....+..|+++|+.|.+.  -.||.++..     +..|+
T Consensus        23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~--~iv~~l~~~-----~~~~L   95 (365)
T PRK09188         23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI--GVVPQLLAT-----GKDGL   95 (365)
T ss_pred             ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC--CCCcEEEEc-----CCcEE
Confidence            556889999999998653  34 3467764321        134578999999999764  235666654     35799


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|..+
T Consensus        96 VmE~~~G~~L  105 (365)
T PRK09188         96 VRGWTEGVPL  105 (365)
T ss_pred             EEEccCCCCH
Confidence            9999999754

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.20  E-value=1.6e-05  Score=75.08  Aligned_cols=76  Identities=17%  Similarity=0.127  Sum_probs=53.1

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -++.+|.|..+.||++....  ..+++|+....      ....+..|.++++.+.+   -.+++++..... .+..++||
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~   80 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFVM   80 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCEEEEEE
Confidence            46778999999999987643  37888987531      13446678888887754   235555544333 46889999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        81 E~~~~g~L   88 (376)
T cd05598          81 DYIPGGDM   88 (376)
T ss_pred             eCCCCCcH
Confidence            99999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.17  E-value=5.6e-06  Score=80.44  Aligned_cols=142  Identities=20%  Similarity=0.190  Sum_probs=86.8

Q ss_pred             cceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           51 THITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        51 ~~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...++|+.||-|....|-.+..-| . -|..|.-+..      .....++|..+|   ++...--|-++|+.-.+ .+.-
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDIL---AEADn~WVVrLyySFQD-kdnL  704 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDIL---AEADNEWVVRLYYSFQD-KDNL  704 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhH---hhcCCcceEEEEEEecc-CCce
Confidence            367889999999888776665332 2 4555554431      123345666554   44444578888876443 4678


Q ss_pred             EEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294          123 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  202 (328)
Q Consensus       123 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  202 (328)
                      |+||+||+|+.       +...|-+|--..                        ++..-||..                 
T Consensus       705 YFVMdYIPGGD-------mMSLLIrmgIFe------------------------E~LARFYIA-----------------  736 (1034)
T KOG0608|consen  705 YFVMDYIPGGD-------MMSLLIRMGIFE------------------------EDLARFYIA-----------------  736 (1034)
T ss_pred             EEEEeccCCcc-------HHHHHHHhccCH------------------------HHHHHHHHH-----------------
Confidence            99999999984       444454432111                        111222221                 


Q ss_pred             HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccC
Q 020294          203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYG  256 (328)
Q Consensus       203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G  256 (328)
                             ++.=.+.    . -...++||+|++|+|||+|.+|...+-||..|-|
T Consensus       737 -------EltcAie----s-VHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  737 -------ELTCAIE----S-VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  778 (1034)
T ss_pred             -------HHHHHHH----H-HHhccceecccCccceEEccCCceeeeecccccc
Confidence                   1111111    1 1357899999999999999999888999875554

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.15  E-value=1.6e-05  Score=74.77  Aligned_cols=76  Identities=18%  Similarity=0.150  Sum_probs=51.0

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -++.+|.|..+.||++... ++ .+.+|+....      ....+..|..++..+.+   ..+++.+..... ....++||
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~---~~iv~~~~~~~~-~~~~~lv~   80 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS---LWVVKMFYSFQD-KLNLYLIM   80 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCeEEEEE
Confidence            3567899999999998764 33 7888987531      12345667777776632   345555544332 45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        81 E~~~gg~L   88 (363)
T cd05628          81 EFLPGGDM   88 (363)
T ss_pred             cCCCCCcH
Confidence            99999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.12  E-value=2.3e-05  Score=73.52  Aligned_cols=77  Identities=18%  Similarity=0.138  Sum_probs=51.1

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ..++.+|.|..+.||++.... + .+++|+.+..      ....+..|..++..+.+   -.+++++..... .+..++|
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~lv   79 (360)
T cd05627           4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG---AWVVKMFYSFQD-KRNLYLI   79 (360)
T ss_pred             eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEE
Confidence            346778999999999988643 3 7888876521      12345667777766633   235555544332 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        80 ~E~~~gg~L   88 (360)
T cd05627          80 MEFLPGGDM   88 (360)
T ss_pred             EeCCCCccH
Confidence            999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.09  E-value=3.1e-05  Score=71.53  Aligned_cols=76  Identities=12%  Similarity=0.029  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++...+  ..+++|+....      ....+..|.+++..+.+.  -.++.++..... .+..|+|||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFVME   81 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC--CceeeeEEEEEc-CCEEEEEEc
Confidence            5678889999999997643  37899987531      123345566666655432  224555443322 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~g~L   88 (324)
T cd05587          82 YVNGGDL   88 (324)
T ss_pred             CCCCCcH
Confidence            9999753

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.08  E-value=3.2e-05  Score=71.54  Aligned_cols=76  Identities=11%  Similarity=0.011  Sum_probs=49.7

Q ss_pred             eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ++.+|.|..+.||++...    ++ .+.+|+....       ....+..|..+++.+.++  -.+++++..... ++..+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~   81 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS--PFLVTLHYAFQT-EAKLH   81 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC--CCcccEEEEEec-CCEEE
Confidence            567888999999998752    23 6788876421       123456788888877643  124444443322 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus        82 lv~e~~~~g~L   92 (332)
T cd05614          82 LILDYVSGGEM   92 (332)
T ss_pred             EEEeCCCCCcH
Confidence            99999999753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.07  E-value=1.5e-05  Score=75.53  Aligned_cols=76  Identities=17%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ..++.+|.|..+.||++... ++ .|++|+....      ....+..|..+++.+.+   -.+++++..... .+..++|
T Consensus         4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~l~~~~~~-~~~~~lv   79 (381)
T cd05626           4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFV   79 (381)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC---CCeeeeEEEEec-CCEEEEE
Confidence            45778999999999998763 33 7888987531      12345677877777643   245566655433 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|+.
T Consensus        80 ~E~~~gg~   87 (381)
T cd05626          80 MDYIPGGD   87 (381)
T ss_pred             EecCCCCc
Confidence            99999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.05  E-value=3.9e-05  Score=74.84  Aligned_cols=95  Identities=14%  Similarity=0.066  Sum_probs=63.4

Q ss_pred             ChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCCc---------------------
Q 020294           36 SDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGP---------------------   87 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~---------------------   87 (328)
                      +.+++.+++++. +|..+      .+-+|++.-....|++-++.+| ..+||+-++.=.                     
T Consensus       141 ~~ee~~~i~e~E-lG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~  219 (538)
T KOG1235|consen  141 PWEEAFKIFEEE-LGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFF  219 (538)
T ss_pred             CHHHHHHHHHHH-hCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhC
Confidence            678899999887 34333      2346676666778999999888 689998875200                     


Q ss_pred             -------------------chHHHHHHHH----HHHHhcC---CCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           88 -------------------SMFEGEALGL----GAMYETR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        88 -------------------~~~~~E~~~l----~~L~~~~---~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                                         -.|-.|++-.    +.+++..   .+.||+||+...   +.-+++|||++|.++
T Consensus       220 p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s---t~RVLtME~~~G~~i  289 (538)
T KOG1235|consen  220 PDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS---TKRVLTMEYVDGIKI  289 (538)
T ss_pred             cCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC---cceEEEEEecCCccC
Confidence                               0012333322    2233322   477999999874   478999999999876

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.05  E-value=2.5e-05  Score=73.03  Aligned_cols=77  Identities=13%  Similarity=0.097  Sum_probs=52.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..++.+|.|..+.||++... + ..+++|+.....    ...+..|+++++.+.+.   .+.+++..... .+..+++||
T Consensus        77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e  152 (353)
T PLN00034         77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHP---NVVKCHDMFDH-NGEIQVLLE  152 (353)
T ss_pred             hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCC---CcceeeeEecc-CCeEEEEEe
Confidence            34567899999999998764 3 378999874321    24467788888877542   34445443322 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus       153 ~~~~~~L  159 (353)
T PLN00034        153 FMDGGSL  159 (353)
T ss_pred             cCCCCcc
Confidence            9999754

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.05  E-value=3.8e-05  Score=71.18  Aligned_cols=75  Identities=13%  Similarity=-0.026  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|..+.||++...+  ..+++|+....      ....+..|.+++..+.+   -.+++++..... .+..+++||
T Consensus         6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv~e   81 (333)
T cd05600           6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS---EWLVKLLYAFQD-DEYLYLAME   81 (333)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC---CCCccEEEEEEc-CCEEEEEEe
Confidence            5678889999999998643  37888987531      12335567777776642   234555544432 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~g~~L   88 (333)
T cd05600          82 YVPGGDF   88 (333)
T ss_pred             CCCCCCH
Confidence            9999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.04  E-value=3.3e-05  Score=72.45  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... ++ .+++|+....      ....+..|..+++.+.+   -.+++++..... .+..++|||
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~E   81 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN---PWVVKLYYSFQD-ENYLYLIME   81 (364)
T ss_pred             EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCeEEEEEC
Confidence            567899999999998864 33 7888987521      12345678888887753   345556654433 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        82 ~~~~g~   87 (364)
T cd05599          82 YLPGGD   87 (364)
T ss_pred             CCCCcH
Confidence            999874

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.04  E-value=5.3e-05  Score=66.91  Aligned_cols=73  Identities=22%  Similarity=0.137  Sum_probs=50.2

Q ss_pred             eeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           58 PVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .++.|..+.+|+.+.. + +.+++|......    ...+..|.++++.+.+   -.+++++..... .+..+++|||++|
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~   77 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVMELVQG   77 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEcC-CCCeEEEEeeccC
Confidence            5778888999998763 3 378889765321    2456778888887743   235556655443 4578999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      ..+
T Consensus        78 ~~L   80 (252)
T cd05084          78 GDF   80 (252)
T ss_pred             CcH
Confidence            753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.04  E-value=4.4e-05  Score=72.21  Aligned_cols=77  Identities=18%  Similarity=0.106  Sum_probs=52.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ..++.+|.|..+.||++... ++ .+.+|.....      ....+..|..+++.+.+   -.+++++..... .+..++|
T Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h---~~iv~~~~~~~~-~~~~~lv   79 (382)
T cd05625           4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN---EWVVRLYYSFQD-KDNLYFV   79 (382)
T ss_pred             EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC---CcCCeEEEEEEe-CCEEEEE
Confidence            45778999999999998763 33 6788876531      12345678877777643   235555554433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        80 ~E~~~gg~L   88 (382)
T cd05625          80 MDYIPGGDM   88 (382)
T ss_pred             EeCCCCCcH
Confidence            999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]

Probab=98.03  E-value=0.00011  Score=62.36  Aligned_cols=169  Identities=21%  Similarity=0.231  Sum_probs=92.8

Q ss_pred             ccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------
Q 020294           63 CINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------  135 (328)
Q Consensus        63 ~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------  135 (328)
                      .++..|.|+-.+|+-++|.-.+  ....+.|...-..|+=..|.-..+++..+     ...++||+..|+.+.       
T Consensus        24 ~ssrllpv~~~ggsa~~~amlk--~~~~~eerrG~~ll~ww~G~Gaarvla~d-----~~alLlEra~~~rsl~~l~~~G   96 (274)
T COG3570          24 HSSRLLPVRRRGGSAIAKAMLK--KADLEEERRGADLLAWWDGIGAARVLAQD-----DNALLLERAGGERSLDVLVRDG   96 (274)
T ss_pred             cccceEEEEecCchhHHHHHhh--hccchHhhccchhhhhhhcCCcchhhccC-----ccHHHHHhccccchHHHHHHhC
Confidence            3456677776665433333221  01122333333333322356677888775     458999999988652       


Q ss_pred             ---ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294          136 ---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  212 (328)
Q Consensus       136 ---~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  212 (328)
                         ..-+-+.+.++++|+-..++     + +.        -.+...|.+.+.     ..   +. +  +..++-...++.
T Consensus        97 ~Dd~aTrIac~a~~rlh~Prp~p-----p-p~--------L~pL~~wf~sLf-----~~---a~-~--d~~i~v~aA~~A  151 (274)
T COG3570          97 NDDAATRIACEALARLHAPRPSP-----P-PE--------LLPLERWFESLF-----RK---AR-Q--DGSIYVEAARAA  151 (274)
T ss_pred             CchHHHHHHHHHHHHhhCCCCCC-----C-cc--------cccHHHHHHHHH-----HH---Hh-h--cCCcchhHHHHH
Confidence               12356778899999874321     1 10        111122322111     00   00 0  111111111122


Q ss_pred             HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhh
Q 020294          213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC  267 (328)
Q Consensus       213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~~~  267 (328)
                         ..++.. +...+.+|||+|.+|||=.+..-=-+||+...+|++.||.+-+.|
T Consensus       152 ---~~LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~  202 (274)
T COG3570         152 ---QTLLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC  202 (274)
T ss_pred             ---HHHhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence               223443 567889999999999996554223589999899999999996655

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.03  E-value=2.9e-05  Score=72.05  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             eeeeCCcccceeEEEEe---C---C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGT---D---A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~---~---~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||++..   +   . ..+.+|......    ...+..|..++..+.++  -.+.+++.......+..++
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~~l   89 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--LNVVNLLGACTKPNGPLMV   89 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--cceeeEEeEecCCCCceEE
Confidence            56689999999999863   1   1 268888875321    23466788888888543  2455566543332456789


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+.+
T Consensus        90 v~ey~~~g~L   99 (338)
T cd05102          90 IVEFCKYGNL   99 (338)
T ss_pred             EEecCCCCcH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.03  E-value=6.9e-05  Score=70.50  Aligned_cols=142  Identities=21%  Similarity=0.216  Sum_probs=91.5

Q ss_pred             eeCCcccceeEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCC-ceEEEEeeecCC
Q 020294           58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEFG  132 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~-~~~~v~e~l~G~  132 (328)
                      .+|.|....+|+-..+++ .+.||......   ...|..|++++..+.+   -.+-+++.++.. .+ ...+||||++.+
T Consensus        82 ~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H---~Nlv~LlGyC~e-~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen   82 LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH---PNLVKLLGYCLE-GGEHRLLVYEYMPNG  157 (361)
T ss_pred             ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC---cCcccEEEEEec-CCceEEEEEEccCCC
Confidence            467788999999999885 68888654322   2348899999888874   356677887764 34 489999999987


Q ss_pred             CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294          133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  212 (328)
Q Consensus       133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  212 (328)
                      ++          --.||.....                     ..+|..     |+.-.+..              ++. 
T Consensus       158 sL----------~d~L~~~~~~---------------------~L~W~~-----R~kIa~g~--------------A~g-  186 (361)
T KOG1187|consen  158 SL----------EDHLHGKKGE---------------------PLDWET-----RLKIALGA--------------ARG-  186 (361)
T ss_pred             CH----------HHHhCCCCCC---------------------CCCHHH-----HHHHHHHH--------------HHH-
Confidence            64          1233332210                     024542     33322211              111 


Q ss_pred             HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCc
Q 020294          213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN  258 (328)
Q Consensus       213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p  258 (328)
                        +. ++-. ..++.+||+|+++.|||+|++-.+.|-||. +..++.
T Consensus       187 --L~-yLH~-~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  187 --LA-YLHE-GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             --HH-HHcc-CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence              22 2222 356789999999999999988888899974 434443

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.02  E-value=4.4e-05  Score=72.07  Aligned_cols=75  Identities=17%  Similarity=0.097  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... ++ .+++|.....      ....+..|.++++.+.+   -.+++++..... .+..++|||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~lv~E   81 (377)
T cd05629           6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS---PWVVSLYYSFQD-AQYLYLIME   81 (377)
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCeeEEEEe
Confidence            567888999999998764 33 7888876421      12345668877776643   235556654433 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~gg~L   88 (377)
T cd05629          82 FLPGGDL   88 (377)
T ss_pred             CCCCCcH
Confidence            9999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.01  E-value=4.9e-05  Score=70.07  Aligned_cols=74  Identities=11%  Similarity=0.016  Sum_probs=48.0

Q ss_pred             eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++.... + .+++|+....      ....+..|.++++.+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--p~i~~~~~~~~~-~~~~~lv~E~~   78 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLTALHCCFQT-KDRLFFVMEYV   78 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCeEEEEEeCC
Confidence            46788899999997643 3 7888987531      122344577766655443  235555544332 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~~~L   83 (321)
T cd05591          79 NGGDL   83 (321)
T ss_pred             CCCcH
Confidence            99753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.00  E-value=7.3e-05  Score=65.84  Aligned_cols=73  Identities=21%  Similarity=0.090  Sum_probs=49.9

Q ss_pred             eeCCcccceeEEEEeCCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .++.|..+.+|+....++ .+++|......    ...+..|.+.++.+.+   -.+++++..... .+..+++|||++|+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~   77 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH---PNIVKLIGVCTQ-RQPIYIVMELVPGG   77 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEec-CCccEEEEECCCCC
Confidence            467788899999876554 78899875432    2245678887777743   245555554433 45789999999997


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        78 ~L   79 (250)
T cd05085          78 DF   79 (250)
T ss_pred             cH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.00  E-value=6e-05  Score=69.84  Aligned_cols=76  Identities=13%  Similarity=0.026  Sum_probs=52.3

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.+.++.|....||++.... + .+++|.....      ....+..|..+++.+.+   -.+.+++..... ++..+++|
T Consensus        22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~   97 (329)
T PTZ00263         22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH---PFIVNMMCSFQD-ENRVYFLL   97 (329)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEc-CCEEEEEE
Confidence            35678889999999998643 3 6888986421      12446678888887753   235555544332 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        98 e~~~~~~L  105 (329)
T PTZ00263         98 EFVVGGEL  105 (329)
T ss_pred             cCCCCChH
Confidence            99999754

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.00  E-value=7.3e-05  Score=75.01  Aligned_cols=174  Identities=12%  Similarity=0.096  Sum_probs=99.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc--cEEEEecC-CC--CcchHHHHHHHHHHHHhcCCCCcccceecccc---CCC---
Q 020294           52 HITKICPVGGGCINLASRYGTDAG--SFFVKTNR-SI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTG---  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~-~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~---  120 (328)
                      .++-.+.|.+|....||.+++..+  +|+||.-- .+  ....+.+|+++++.|..+.  .|-.-+.....   ..+   
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~--nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHK--NIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCC--ceeeEeccccccccCCCcee
Confidence            444445578899999999988544  89887643 32  2456789999999998752  23333321111   112   


Q ss_pred             ceEEEEeeecCCCCCccHHHHHHHHH-HHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhC
Q 020294          121 GSYIIMEFIEFGSSRGNQSVFGKKLA-EMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY  199 (328)
Q Consensus       121 ~~~~v~e~l~G~~~~~~~~~lg~~La-~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~  199 (328)
                      ...++|||++|+.+       .+.+- +++.-..                                              
T Consensus       116 EvllLmEyC~gg~L-------vd~mn~Rlq~~lt----------------------------------------------  142 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSL-------VDFMNTRLQTRLT----------------------------------------------  142 (738)
T ss_pred             EEEeehhhccCCcH-------HHHHHHHHhccCC----------------------------------------------
Confidence            34788999998743       22221 1111100                                              


Q ss_pred             CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cc--c-CC-chhhhhhhhh-------
Q 020294          200 GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY--Y-GH-NEAEFGMSWC-------  267 (328)
Q Consensus       200 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~--~-G~-p~~DLa~~~~-------  267 (328)
                       ..+....+..+.+.+..+.   ..++.|||+||+.+|||+..++.-.|.||. ++  + .. -..++.++..       
T Consensus       143 -e~eVLkIf~dv~~AVa~mH---~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TT  218 (738)
T KOG1989|consen  143 -EDEVLKIFYDVCEAVAAMH---YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTT  218 (738)
T ss_pred             -hHHHHHHHHHHHHHHHHHh---cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCC
Confidence             0011112222333332221   357789999999999999999888999985 32  2 22 3455554421       


Q ss_pred             cC-CChhhHHHHhhhCCCC
Q 020294          268 AG-FGGSFYNSYFEVMPKQ  285 (328)
Q Consensus       268 ~~-~~~~f~~~Y~~~~pl~  285 (328)
                      .. ..++.++-|.- .|++
T Consensus       219 p~YRsPEMIDlysg-~pI~  236 (738)
T KOG1989|consen  219 PQYRSPEMIDLYSG-LPIG  236 (738)
T ss_pred             ccccChHHHhhhcC-CCCc
Confidence            11 23678888864 2443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.00  E-value=5e-05  Score=70.45  Aligned_cols=139  Identities=18%  Similarity=0.158  Sum_probs=89.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-+..+|.|....||.+...+  .-|.+|+-...      .....+.|.++|+.+-+   --.|++|..-.. +...+
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH---PFlPTLYa~fet-~~~~c  153 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH---PFLPTLYASFET-DKYSC  153 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC---Cccchhhheeec-cceeE
Confidence            44556778999999999998765  36778876532      12345678888887743   358899876554 57889


Q ss_pred             EEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH
Q 020294          124 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST  203 (328)
Q Consensus       124 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~  203 (328)
                      ++|||++|+.              ||......++--               ..++-.-||++                  
T Consensus       154 l~meyCpGGd--------------L~~LrqkQp~~~---------------fse~~aRFYaA------------------  186 (459)
T KOG0610|consen  154 LVMEYCPGGD--------------LHSLRQKQPGKR---------------FSESAARFYAA------------------  186 (459)
T ss_pred             EEEecCCCcc--------------HHHHHhhCCCCc---------------cchhhHHHHHH------------------
Confidence            9999999985              344332110000               01111223332                  


Q ss_pred             HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                            +++-++. +|    .-.++|=+||+|+|||+.++|...+.||+
T Consensus       187 ------Evl~ALE-YL----HmlGivYRDLKPENILvredGHIMLsDFD  224 (459)
T KOG0610|consen  187 ------EVLLALE-YL----HMLGIVYRDLKPENILVREDGHIMLSDFD  224 (459)
T ss_pred             ------HHHHHHH-HH----HhhceeeccCCcceeEEecCCcEEeeecc
Confidence                  1111111 22    13478999999999999999988899975

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.99  E-value=0.00014  Score=64.83  Aligned_cols=74  Identities=20%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             eeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.++.|..+.+|++...+ +.+++|.....  ....+..|.++++.+.+   -.+.+++....  ++..+++|||++|+
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~--~~~~~lv~e~~~~~   85 (262)
T cd05071          11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSKG   85 (262)
T ss_pred             eeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC---CCcceEEEEEC--CCCcEEEEEcCCCC
Confidence            4567888889999987654 47888988642  23457788888888753   23444454332  45679999999997


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        86 ~L   87 (262)
T cd05071          86 SL   87 (262)
T ss_pred             cH
Confidence            64

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=97.99  E-value=4.6e-05  Score=70.09  Aligned_cols=73  Identities=18%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             eeeCCcccceeEEEEe----CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           57 CPVGGGCINLASRYGT----DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~----~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      +.+|.|..+.||++..    .++ .+.+|+....     ....+..|.++++.+.+   -.+++++..... ++..++||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH---PFIVKLHYAFQT-EGKLYLIL   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC---CCcccEEEEEEc-CCEEEEEE
Confidence            4578888999998864    223 6888876531     12334567777777743   235555554433 46889999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        78 e~~~~~~   84 (318)
T cd05582          78 DFLRGGD   84 (318)
T ss_pred             cCCCCCc
Confidence            9999875

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=97.99  E-value=6.2e-05  Score=69.49  Aligned_cols=78  Identities=12%  Similarity=0.023  Sum_probs=50.1

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|....+|++... + ..+++|.....      ....+..|.++++.+.....-.+.+++..... .+..++|||
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~lv~E   82 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCFVME   82 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEEEEc
Confidence            556888999999998764 3 37888987531      12345567666665543222235555544332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        83 ~~~~~~L   89 (324)
T cd05589          83 YAAGGDL   89 (324)
T ss_pred             CCCCCcH
Confidence            9999753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=97.99  E-value=0.00013  Score=64.67  Aligned_cols=76  Identities=20%  Similarity=0.195  Sum_probs=52.4

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .+.++.|..+.+|+....+..+++|..... ....+..|...++.+.+.   .+.+++.......+..+++|||++|+++
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~lv~e~~~~~~L   87 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHS---NLVQLLGVIVEEKGGLYIVTEYMAKGSL   87 (256)
T ss_pred             eeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCC---CeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence            455788888899999887778999987643 234567788888877542   3444444322223578999999998754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=97.98  E-value=4.7e-05  Score=70.26  Aligned_cols=73  Identities=15%  Similarity=0.089  Sum_probs=46.6

Q ss_pred             eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++.... + .+.+|+....      ....+..|..++..+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~-~~~~~iv~Ey~   78 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLYCCFQT-PDRLFFVMEFV   78 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC--CchhceeeEEEc-CCEEEEEEcCC
Confidence            46788999999998643 3 6888876521      122344566666555433  235555544332 46789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        79 ~~g~   82 (320)
T cd05590          79 NGGD   82 (320)
T ss_pred             CCch
Confidence            9975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=97.98  E-value=5.4e-05  Score=69.97  Aligned_cols=75  Identities=20%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|..+.||++... ++ .+++|.....      ....+..|..+++.+.+   -.+++++..... .+..++|||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (330)
T cd05601           6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS---PWIPQLQYAFQD-KDNLYLVME   81 (330)
T ss_pred             EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeEEEEEC
Confidence            566888999999998764 33 7888987531      12345667776665532   235555544332 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~~~L   88 (330)
T cd05601          82 YQPGGDL   88 (330)
T ss_pred             CCCCCCH
Confidence            9999753

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=97.97  E-value=2.2e-05  Score=73.09  Aligned_cols=75  Identities=15%  Similarity=0.068  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++...  +..+++|+...      .....+..|.+++..+.+   -.+++++..... ++..++|||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (350)
T cd05573           6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---PWIVKLYYSFQD-EEHLYLVME   81 (350)
T ss_pred             EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC---CCccchhhheec-CCeEEEEEc
Confidence            567888999999999865  34788998753      122346677777777653   234445443332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~~~L   88 (350)
T cd05573          82 YMPGGDL   88 (350)
T ss_pred             CCCCCCH
Confidence            9998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.97  E-value=0.00013  Score=64.75  Aligned_cols=74  Identities=22%  Similarity=0.220  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.++.|..+.+|++...++ .+++|.....  ....+..|.++++.+.+..  .+ +++....  .+..+++|||++|+
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~--i~-~~~~~~~--~~~~~~v~e~~~~~   85 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDK--LV-PLYAVVS--EEPIYIVTEFMGKG   85 (260)
T ss_pred             eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCC--ee-eEEEEEc--CCCcEEEEEcCCCC
Confidence            45688888999999876543 7888986542  2345677888888876431  22 2333322  35679999999987


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        86 ~L   87 (260)
T cd05069          86 SL   87 (260)
T ss_pred             CH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=97.97  E-value=5.7e-05  Score=69.75  Aligned_cols=73  Identities=12%  Similarity=-0.013  Sum_probs=46.6

Q ss_pred             eeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++... ++ .+++|+....   .   ...+..|..+++.+.+   -.+.+++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~   77 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH---PFLTALKYSFQT-HDRLCFVMEYA   77 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCCEEEEEEc-CCEEEEEEeCC
Confidence            4678899999998764 33 7888987531   1   1234457777766643   234444433322 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~~~L   82 (323)
T cd05571          78 NGGEL   82 (323)
T ss_pred             CCCcH
Confidence            99753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=97.97  E-value=6.8e-05  Score=69.50  Aligned_cols=75  Identities=12%  Similarity=0.053  Sum_probs=50.2

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++...  +..|++|+...      .....+..|..+++.+.+   -.++.++..... ++..++|||
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR---RWITNLHYAFQD-ENNLYLVMD   81 (331)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCceEEEEec-CCeEEEEEe
Confidence            567889999999998864  34788998642      112335667777766533   235555554333 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~g~~L   88 (331)
T cd05597          82 YYVGGDL   88 (331)
T ss_pred             cCCCCcH
Confidence            9999754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=97.96  E-value=6.4e-05  Score=69.65  Aligned_cols=73  Identities=12%  Similarity=0.016  Sum_probs=46.8

Q ss_pred             eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++... ++ .+++|+....      ....+..|..+++.+.+.   .+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~~~~~~~~-~~~~~lv~Ey~   77 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHP---FLTSLKYSFQT-KDRLCFVMEYV   77 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC---CCcceEEEEEc-CCEEEEEEeCC
Confidence            4678889999998764 33 7888987531      122345677777666431   24444433322 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~g~L   82 (328)
T cd05593          78 NGGEL   82 (328)
T ss_pred             CCCCH
Confidence            99753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=97.96  E-value=5e-05  Score=70.11  Aligned_cols=74  Identities=18%  Similarity=0.151  Sum_probs=48.6

Q ss_pred             eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ++.+|.|..+.+|++...    .+ .+++|+....       ....+..|..+++.+.+.   .+.+++..... ++..+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~~~~~~~~-~~~~~   76 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHP---FIVDLIYAFQT-GGKLY   76 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCC---chhceeeEEec-CCeEE
Confidence            356888999999998752    22 6888876421       123355788888877542   34444443332 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      ++|||++|+.
T Consensus        77 lv~e~~~~~~   86 (323)
T cd05584          77 LILEYLSGGE   86 (323)
T ss_pred             EEEeCCCCch
Confidence            9999999875

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=97.95  E-value=0.00018  Score=66.46  Aligned_cols=72  Identities=13%  Similarity=-0.015  Sum_probs=45.5

Q ss_pred             eeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++... ++ .+.+|+....   .   ...+..|.++++.+.+   -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h---p~i~~~~~~~~~-~~~~~lv~E~~   77 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVMEYA   77 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCCceEEEEEc-CCEEEEEEeCC
Confidence            4678899999998753 33 7888887531   1   1223456666655533   234555544332 46789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        78 ~~~~   81 (325)
T cd05594          78 NGGE   81 (325)
T ss_pred             CCCc
Confidence            9975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=97.94  E-value=5.9e-05  Score=69.67  Aligned_cols=73  Identities=14%  Similarity=-0.001  Sum_probs=47.3

Q ss_pred             eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++... ++ .+++|.....      ....+..|.++++.+.+   -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~E~~   77 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVMEYA   77 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCEEEEEEeCC
Confidence            4678889999998764 33 7888987531      11234467777776643   134444443322 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~~~L   82 (323)
T cd05595          78 NGGEL   82 (323)
T ss_pred             CCCcH
Confidence            99753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=97.94  E-value=7.5e-05  Score=69.19  Aligned_cols=74  Identities=9%  Similarity=0.023  Sum_probs=49.6

Q ss_pred             eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++.... + .+++|+....      ....+..|..+++.+.++  -.+++++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h--p~Iv~~~~~~~~-~~~~~lv~e~~   78 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH--PFLVGLHSCFQT-ESRLFFVIEFV   78 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CCCCceEEEEEc-CCEEEEEEeCC
Confidence            46788899999998643 3 7888987531      123456777777777543  235555554332 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~g~L   83 (329)
T cd05588          79 SGGDL   83 (329)
T ss_pred             CCCCH
Confidence            99753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=97.94  E-value=9.6e-05  Score=66.93  Aligned_cols=73  Identities=12%  Similarity=0.070  Sum_probs=49.7

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.++.|..+.||+.... + ..+++|.....    ....+..|.++++.+.+   -.+.+++..... ++..+++|||
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~   84 (288)
T cd07871           9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH---ANIVTLHDIIHT-ERCLTLVFEY   84 (288)
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEeC
Confidence            3567889999999998764 2 37888876521    12345678888887753   235555554433 4578999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        85 ~~~   87 (288)
T cd07871          85 LDS   87 (288)
T ss_pred             CCc
Confidence            986

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=97.94  E-value=6.3e-05  Score=68.32  Aligned_cols=75  Identities=17%  Similarity=0.083  Sum_probs=50.4

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|..+.+|++...  +..+++|.....      ....+..|..+++.+.+   -.+.+++..... .+..+++||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e   81 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH---PFIIRLFWTEHD-QRFLYMLME   81 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC---CcHhhhHhhhcc-CCeEEEEEe
Confidence            567888999999999865  337888986421      12346678877777753   234445444332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~~~L   88 (291)
T cd05612          82 YVPGGEL   88 (291)
T ss_pred             CCCCCCH
Confidence            9999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=97.93  E-value=8.7e-05  Score=70.02  Aligned_cols=77  Identities=13%  Similarity=0.049  Sum_probs=51.1

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|..+.+|++....  ..+++|....      .....+..|..+++.+.+   -.+++++..... +...++|
T Consensus        46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h---~~iv~~~~~~~~-~~~~~lv  121 (370)
T cd05596          46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS---EWIVQLHYAFQD-DKYLYMV  121 (370)
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEEE
Confidence            446678889999999987643  3788898642      112335667877777643   234445443332 4578999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       122 ~Ey~~gg~L  130 (370)
T cd05596         122 MEYMPGGDL  130 (370)
T ss_pred             EcCCCCCcH
Confidence            999999754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=97.93  E-value=0.00018  Score=63.70  Aligned_cols=77  Identities=19%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .-++.++.|..+.+|+++..++ .+++|.....  ....+..|++.++.+.+.   .+.+++..... .+..+++|||++
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~iv~e~~~   82 (256)
T cd05114           7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHP---KLVQLYGVCTQ-QKPLYIVTEFME   82 (256)
T ss_pred             EEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCC---CceeEEEEEcc-CCCEEEEEEcCC
Confidence            3356788999999999887655 7888876532  234567788888888542   34445544332 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        83 ~~~L   86 (256)
T cd05114          83 NGCL   86 (256)
T ss_pred             CCcH
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=97.93  E-value=9.9e-05  Score=69.77  Aligned_cols=76  Identities=17%  Similarity=0.180  Sum_probs=52.2

Q ss_pred             eeeeCCcccceeEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||+.+.      +.+ .+.+|+....    ....+..|.++++.+.++  -.+.+++..... .+..++
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~l  116 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--INIVNLLGACTV-GGPTLV  116 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--cceeeeeeeecc-CCccee
Confidence            56788999999999863      122 6788876532    123466799988888543  245556655433 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+++
T Consensus       117 v~E~~~~g~L  126 (375)
T cd05104         117 ITEYCCYGDL  126 (375)
T ss_pred             eehhccCCcH
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.93  E-value=7.3e-05  Score=69.09  Aligned_cols=74  Identities=22%  Similarity=0.321  Sum_probs=53.3

Q ss_pred             ceeeeee-eCCcccceeEEEEeCCc-cEEEEecCC------------------------CCc-----chHHHHHHHHHHH
Q 020294           52 HITKICP-VGGGCINLASRYGTDAG-SFFVKTNRS------------------------IGP-----SMFEGEALGLGAM  100 (328)
Q Consensus        52 ~i~~v~~-i~~G~~n~~y~v~~~~~-~~vlK~~~~------------------------~~~-----~~~~~E~~~l~~L  100 (328)
                      .+..+.. |+.|-..-||-++..+| .|.+||+.-                        ..+     ...++|.+-|..|
T Consensus       144 ~i~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl  223 (520)
T KOG2270|consen  144 VIVEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL  223 (520)
T ss_pred             eeeecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence            3444333 34566677999988777 788898731                        011     2246799999999


Q ss_pred             HhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294          101 YETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus       101 ~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      ++. |+|+|+|+...     .+++||+||.+
T Consensus       224 ~~a-GIP~PePIlLk-----~hVLVM~FlGr  248 (520)
T KOG2270|consen  224 NNA-GIPCPEPILLK-----NHVLVMEFLGR  248 (520)
T ss_pred             Hhc-CCCCCCceeee-----cceEeeeeccC
Confidence            987 79999999886     46999999874

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=97.93  E-value=0.00015  Score=68.55  Aligned_cols=79  Identities=13%  Similarity=0.082  Sum_probs=50.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|..+.+|++....  ..+++|+....      ....+..|..+++.+.+   -.+++++..... .+..+
T Consensus        44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~  119 (371)
T cd05622          44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLY  119 (371)
T ss_pred             hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEE
Confidence            33446778999999999998753  37888886421      12335567776666543   234445544332 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus       120 lv~Ey~~gg~L  130 (371)
T cd05622         120 MVMEYMPGGDL  130 (371)
T ss_pred             EEEcCCCCCcH
Confidence            99999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=97.92  E-value=0.00016  Score=68.29  Aligned_cols=78  Identities=13%  Similarity=0.066  Sum_probs=50.3

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.-++.+|.|..+.||++....  ..+++|+...      .....+..|..+++.+.+   -.+.+++..... ++..++
T Consensus        45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l  120 (370)
T cd05621          45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQD-DKYLYM  120 (370)
T ss_pred             CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEE
Confidence            3445678999999999988643  3688887642      112335567777766543   234444443322 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       121 v~Ey~~gg~L  130 (370)
T cd05621         121 VMEYMPGGDL  130 (370)
T ss_pred             EEcCCCCCcH
Confidence            9999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=97.92  E-value=0.0001  Score=68.05  Aligned_cols=76  Identities=12%  Similarity=0.037  Sum_probs=46.6

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++.... + .+.+|+....      .......|..++..+..+  -.++.++..... .+..++|||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP--PFLTQLHSCFQT-MDRLYFVME   81 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CeEeeEEEEEec-CCEEEEEEc
Confidence            5568889999999987643 3 7888986531      112233455555544322  224444443332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~g~L   88 (323)
T cd05616          82 YVNGGDL   88 (323)
T ss_pred             CCCCCCH
Confidence            9998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.92  E-value=0.00018  Score=63.78  Aligned_cols=74  Identities=23%  Similarity=0.235  Sum_probs=52.5

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++.++.|..+.+|++...++ .+++|.....  ....+..|..+++.+.+.   .+++++....  .+..+++||+++|+
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~   85 (260)
T cd05067          11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP---RLVRLYAVVT--QEPIYIITEYMENG   85 (260)
T ss_pred             eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc---CeeeEEEEEc--cCCcEEEEEcCCCC
Confidence            56788899999999987554 8889977642  235677888888888542   3444444322  35689999999987


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        86 ~L   87 (260)
T cd05067          86 SL   87 (260)
T ss_pred             CH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=97.92  E-value=0.00019  Score=63.66  Aligned_cols=79  Identities=22%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.++.|..+.+|+....++ .+++|.....  ....+..|..+++.+.+.   .+.+++..... .+..+++||+
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~   82 (261)
T cd05072           7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD---KLVRLYAVVTK-EEPIYIITEY   82 (261)
T ss_pred             HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCC---CeeeEEEEEcC-CCCcEEEEec
Confidence            344567789999999999876544 7888876532  234567788888877542   34444444332 4578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+++
T Consensus        83 ~~~~~L   88 (261)
T cd05072          83 MAKGSL   88 (261)
T ss_pred             CCCCcH
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.92  E-value=0.00014  Score=64.22  Aligned_cols=74  Identities=18%  Similarity=0.064  Sum_probs=52.5

Q ss_pred             eeeeCCcccceeEEEEeCCc--cEEEEecCCCCcc-----hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPS-----MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~~~~-----~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.+|.|....||++.....  .|++|+.......     ....|...++.+.+   -.+++++..... ....+++|++
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~v~~~   79 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH---PNIVQILDVFQD-DNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB---TTBCHEEEEEEE-SSEEEEEEEE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc---cccccccccccc-cccccccccc
Confidence            56788999999999998654  7999998754311     12347888888843   235566655443 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        80 ~~~~~   84 (260)
T PF00069_consen   80 CPGGS   84 (260)
T ss_dssp             ETTEB
T ss_pred             ccccc
Confidence            99974

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=97.91  E-value=0.00022  Score=63.14  Aligned_cols=75  Identities=20%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.++.|..+.+|+....++ .+++|.....  ....+..|...++.+.+   -.+++++..... ....+++||+++|+
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~~~   86 (261)
T cd05034          11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH---DKLVQLYAVCSE-EEPIYIVTEYMSKG   86 (261)
T ss_pred             eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC---CCEeeeeeeeec-CCceEEEEeccCCC
Confidence            45678888899999876543 7888887642  23557788888887754   345556554432 46789999999997


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        87 ~L   88 (261)
T cd05034          87 SL   88 (261)
T ss_pred             CH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=97.90  E-value=5.6e-05  Score=69.10  Aligned_cols=136  Identities=15%  Similarity=0.197  Sum_probs=89.5

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|-|....||.|.-.+ + -|.+|.-..      .......+|..+|..+.+  ++.|.-.+..-.  .+.-|+|
T Consensus        28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylV  103 (357)
T KOG0598|consen   28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLV  103 (357)
T ss_pred             eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEE
Confidence            345667899999999998643 3 566676542      124557789999988654  677877776543  4688999


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      ++|+.|+.+            ..|-....  .|.                 .+-..||.                     
T Consensus       104 ld~~~GGeL------------f~hL~~eg--~F~-----------------E~~arfYl---------------------  131 (357)
T KOG0598|consen  104 LDYLNGGEL------------FYHLQREG--RFS-----------------EDRARFYL---------------------  131 (357)
T ss_pred             EeccCCccH------------HHHHHhcC--Ccc-----------------hhHHHHHH---------------------
Confidence            999999865            34443321  011                 11122332                     


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                         .++..++..+     ....++|+|++|+|||+|.+|-..+-|+..
T Consensus       132 ---aEi~lAL~~L-----H~~gIiyRDlKPENILLd~~GHi~LtDFgL  171 (357)
T KOG0598|consen  132 ---AEIVLALGYL-----HSKGIIYRDLKPENILLDEQGHIKLTDFGL  171 (357)
T ss_pred             ---HHHHHHHHHH-----HhCCeeeccCCHHHeeecCCCcEEEecccc
Confidence               1222223322     245899999999999999999889999753

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=97.90  E-value=0.00021  Score=65.51  Aligned_cols=74  Identities=14%  Similarity=0.019  Sum_probs=52.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|..+.+|++...+  ..+++|......      ...+..|.+.++.+.+   -.+++++..... ....+++||
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e   81 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH---PFLPTLYASFQT-ETYLCLVMD   81 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC---CCchhheeeeec-CCEEEEEEE
Confidence            4567888889999998743  488999876421      2345678887777753   246666655433 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        82 ~~~~~~   87 (316)
T cd05574          82 YCPGGE   87 (316)
T ss_pred             ecCCCC
Confidence            999985

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=97.90  E-value=0.00027  Score=62.18  Aligned_cols=75  Identities=19%  Similarity=0.082  Sum_probs=53.0

Q ss_pred             eeeeCCcccceeEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+.++.|..+.+|++...+      ..+++|......    ...+..|.+.++.+.+   -.+.+++..... .+..+++
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~i   79 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH---PNIVKLLGVCTE-EEPLMIV   79 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCeeEEE
Confidence            3567888999999988754      468889886432    3457788888888833   245556654433 4688999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      ||+++|+.+
T Consensus        80 ~e~~~~~~l   88 (258)
T smart00219       80 MEYMEGGDL   88 (258)
T ss_pred             EeccCCCCH
Confidence            999999753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=97.89  E-value=0.00012  Score=67.50  Aligned_cols=74  Identities=18%  Similarity=0.113  Sum_probs=46.8

Q ss_pred             eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++... ++ .+++|.....      .......|..++..+..+  -.+++++..... .+..++||||+
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E~~   78 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLTHLYCTFQT-KEHLFFVMEFL   78 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CCccCeeEEEEe-CCEEEEEECCC
Confidence            4778889999999864 33 6888886531      122344566555544332  345555544333 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~g~L   83 (316)
T cd05620          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            98753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=97.89  E-value=0.00012  Score=67.49  Aligned_cols=74  Identities=15%  Similarity=0.083  Sum_probs=45.7

Q ss_pred             eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++...+ + .+++|.....      .......|..++..+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~i~~~~~~~~~-~~~~~lv~e~~   78 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH--PFLTHLFCTFQT-KEHLFFVMEYL   78 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence            47889999999998643 3 6888876531      112233455555444332  235555544332 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~gg~L   83 (316)
T cd05592          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            99753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=97.89  E-value=8e-05  Score=69.47  Aligned_cols=76  Identities=13%  Similarity=0.006  Sum_probs=50.9

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -++.+|.|..+.||++... .+  .+++|....      .....+..|..+++.+.+   -.+.+++..... .+..+++
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv  109 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH---PFCVNLYGSFKD-ESYLYLV  109 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCCcceEEEEEe-CCEEEEE
Confidence            3567899999999998743 22  688887642      112345678888887753   235555554433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       110 ~Ey~~~g~L  118 (340)
T PTZ00426        110 LEFVIGGEF  118 (340)
T ss_pred             EeCCCCCcH
Confidence            999999753

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.89  E-value=0.00011  Score=68.05  Aligned_cols=78  Identities=17%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ..-++.+|.|..+.||++.... + .+++|+.... .   ...+..|.+.++.+.+   -.+.+++..... ++..+++|
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~   82 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICM   82 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEe
Confidence            3446778999999999998753 4 6777776532 1   2446778888887753   235555544332 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        83 e~~~~~~L   90 (331)
T cd06649          83 EHMDGGSL   90 (331)
T ss_pred             ecCCCCcH
Confidence            99999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=97.89  E-value=0.00025  Score=62.95  Aligned_cols=78  Identities=22%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ..-.+.++.|..+.+|+....+ +.+++|.....  ....+..|...++.+.+   -.+++++..... .+..+++||++
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   83 (261)
T cd05068           8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH---PKLIQLYAVCTL-EEPIYIVTELM   83 (261)
T ss_pred             eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC---CCccceeEEEec-CCCeeeeeecc
Confidence            3445778888889999977544 37888887642  23456778888887754   235555554332 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        84 ~~~~L   88 (261)
T cd05068          84 KYGSL   88 (261)
T ss_pred             cCCcH
Confidence            88753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=97.88  E-value=0.00033  Score=63.42  Aligned_cols=74  Identities=16%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.++.|....+|++.... + .+++|......   ...+..|...++.+.+   -.+++++..... ++..+++|||++
T Consensus        17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   92 (292)
T cd06644          17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH---PYIVKLLGAFYW-DGKLWIMIEFCP   92 (292)
T ss_pred             hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CcEeeeEEEEEe-CCeEEEEEecCC
Confidence            4557888889999998753 3 78888876432   2335567777776653   235555554332 568899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus        93 ~~~   95 (292)
T cd06644          93 GGA   95 (292)
T ss_pred             CCc
Confidence            985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=97.87  E-value=0.00029  Score=73.20  Aligned_cols=75  Identities=16%  Similarity=0.040  Sum_probs=51.8

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||+.....  ..+++|..+..   .   ...+..|+++++.+.+   -.+++++..... .+..+++||
T Consensus         7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H---PNIVkl~~v~~d-~~~lyLVME   82 (932)
T PRK13184          7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH---PGIVPVYSICSD-GDPVYYTMP   82 (932)
T ss_pred             EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC---cCcCeEEEEEee-CCEEEEEEE
Confidence            4568889999999987642  37889987532   1   2346678888877754   235555554433 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+++
T Consensus        83 Y~eGGSL   89 (932)
T PRK13184         83 YIEGYTL   89 (932)
T ss_pred             cCCCCCH
Confidence            9999854

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=97.87  E-value=0.00012  Score=67.53  Aligned_cols=76  Identities=12%  Similarity=0.047  Sum_probs=48.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ...+|.|..+.||++... ++ .+++|+....      ....+..|..++..+.+.  -.++.++..... .+..++|||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP--PFLTQLHSCFQT-VDRLYFVME   81 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CchhheeeEEec-CCEEEEEEc
Confidence            456888999999998754 34 7888986531      122344566666555432  235555543322 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 y~~~g~L   88 (323)
T cd05615          82 YVNGGDL   88 (323)
T ss_pred             CCCCCcH
Confidence            9999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.86  E-value=0.0002  Score=63.59  Aligned_cols=74  Identities=22%  Similarity=0.213  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++.++.|..+.+|++...++ .+++|.....  ....+..|..+++.+.+.   .+.+++....  ....+++|||++|+
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~   85 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKG   85 (260)
T ss_pred             hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCC
Confidence            45688888899999986554 7888877642  245677899888888542   2333333322  35679999999987


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        86 ~L   87 (260)
T cd05070          86 SL   87 (260)
T ss_pred             cH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=97.86  E-value=0.00037  Score=63.52  Aligned_cols=75  Identities=19%  Similarity=0.068  Sum_probs=49.7

Q ss_pred             eeeeCCcccceeEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCccccee
Q 020294           56 ICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      .+.+|.|....||++...+                 + .+.+|......    ...+..|++.++.+.+   -.+.+++.
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~   86 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---PNIIRLLG   86 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCeeEEEE
Confidence            4568889999999986422                 1 47888875421    2346678888777743   23455555


Q ss_pred             ccccCCCceEEEEeeecCCCC
Q 020294          114 VGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       114 ~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .... .+..+++|||++|+.+
T Consensus        87 ~~~~-~~~~~lv~e~~~~~~L  106 (304)
T cd05096          87 VCVD-EDPLCMITEYMENGDL  106 (304)
T ss_pred             EEec-CCceEEEEecCCCCcH
Confidence            4332 4578999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.86  E-value=0.00015  Score=73.80  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=50.4

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|....||+....  ...+.+|+.....      ...+..|...++.+.+.   .+.+++..... .+..++|||
T Consensus         9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp---~Iv~~~~~~~~-~~~~~lVmE   84 (669)
T cd05610           9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSP---FIVHLYYSLQS-ANNVYLVME   84 (669)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCC---CcCeEEEEEEE-CCEEEEEEe
Confidence            567899999999999875  3478889875321      24466677777766432   24444443332 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        85 y~~g~~L   91 (669)
T cd05610          85 YLIGGDV   91 (669)
T ss_pred             CCCCCCH
Confidence            9999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=97.86  E-value=0.00029  Score=62.05  Aligned_cols=73  Identities=25%  Similarity=0.136  Sum_probs=49.6

Q ss_pred             eeCCcccceeEEEEeCC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           58 PVGGGCINLASRYGTDA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .++.|..+.+|++...+ ..+++|......    ...+..|.+.++.+.+   -.+++++..... ....+++||+++|.
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~~~   77 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH---PNIVKLIGVCVQ-KQPIYIVMELVPGG   77 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeEEEEEEEec-CCCeEEEEEcCCCC
Confidence            46778888999998754 488899876432    2346678877777643   234455544332 46789999999987


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        78 ~l   79 (251)
T cd05041          78 SL   79 (251)
T ss_pred             cH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=97.86  E-value=0.0001  Score=67.61  Aligned_cols=72  Identities=15%  Similarity=0.067  Sum_probs=45.5

Q ss_pred             eCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|..+.||++...+ + .+++|.....      ....+..|..+++.+.+.   .+.+++..... .+..+++|||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCP---FIVPLKFSFQS-PEKLYLVLAFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC---cEeceeeEEec-CCeEEEEEcCCC
Confidence            4678889999987643 3 6888876421      123345677777776431   23334333222 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 ~g~L   80 (312)
T cd05585          77 GGEL   80 (312)
T ss_pred             CCcH
Confidence            9753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=97.86  E-value=8.7e-05  Score=66.53  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=51.3

Q ss_pred             eeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.++.|....+|+....+       ..+.+|......    ...+..|+++++.+.+.   .+.+++..... .+..++
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~l   85 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE---NIVKFYGVCTE-GDPPIM   85 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCC---CchheeeEEec-CCCeEE
Confidence            3557788888999986522       368889876422    24577888888887542   35555554433 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+++
T Consensus        86 v~e~~~~~~L   95 (280)
T cd05049          86 VFEYMEHGDL   95 (280)
T ss_pred             EEecCCCCCH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=97.86  E-value=0.00036  Score=63.46  Aligned_cols=77  Identities=13%  Similarity=0.082  Sum_probs=51.4

Q ss_pred             eeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.-++.++.|..+.+|++...  +..+++|.....   ....+..|...++.+.+   -.+.+++..... .+..+++||
T Consensus        21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e   96 (297)
T cd06656          21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVME   96 (297)
T ss_pred             ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCEEEEeec
Confidence            344677898999999998753  347888877532   23446667777776643   234555544322 457899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|..
T Consensus        97 ~~~~~~  102 (297)
T cd06656          97 YLAGGS  102 (297)
T ss_pred             ccCCCC
Confidence            999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.85  E-value=0.00024  Score=69.48  Aligned_cols=75  Identities=16%  Similarity=-0.009  Sum_probs=50.4

Q ss_pred             eeeeCCcccceeEEEEeC-C--ccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-A--GSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~--~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.+|.|....+|+.... +  ..+++|......   ...+..|+..++.+.+   -.+++++..... .+..++||||+
T Consensus        72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~  147 (478)
T PTZ00267         72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYG  147 (478)
T ss_pred             EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECC
Confidence            455678888899998643 2  367788654322   2345668877776643   246667665443 56889999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus       148 ~gg~L  152 (478)
T PTZ00267        148 SGGDL  152 (478)
T ss_pred             CCCCH
Confidence            99864

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=97.85  E-value=0.0003  Score=63.28  Aligned_cols=78  Identities=17%  Similarity=0.079  Sum_probs=53.2

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~~v~  126 (328)
                      -++.++.|..+.+|++....  ..+++|.....  ....+..|..+++.+.++  -.+++++.....    ..+..+++|
T Consensus        22 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~lv~   99 (286)
T cd06638          22 IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--PNVVKFYGMYYKKDVKNGDQLWLVL   99 (286)
T ss_pred             eeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--CCeeeeeeeeeecccCCCCeEEEEE
Confidence            34568888999999987643  37888986542  234567788888888654  245556554311    135689999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       100 e~~~~~~L  107 (286)
T cd06638         100 ELCNGGSV  107 (286)
T ss_pred             eecCCCCH
Confidence            99999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=97.84  E-value=0.00024  Score=64.72  Aligned_cols=74  Identities=14%  Similarity=0.061  Sum_probs=49.7

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.+|.|..+.||++... + ..+++|+....    .......|+.+++.+.+.   .+.+++..... ....+++|||
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~-~~~~~lv~e~   84 (303)
T cd07869           9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA---NIVLLHDIIHT-KETLTLVFEY   84 (303)
T ss_pred             EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCC---CcCeEEEEEec-CCeEEEEEEC
Confidence            4677899999999999874 3 37889987531    123456788888877542   24444443332 4578999999


Q ss_pred             ecCC
Q 020294          129 IEFG  132 (328)
Q Consensus       129 l~G~  132 (328)
                      ++|.
T Consensus        85 ~~~~   88 (303)
T cd07869          85 VHTD   88 (303)
T ss_pred             CCcC
Confidence            9763

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=97.84  E-value=5.5e-05  Score=70.03  Aligned_cols=74  Identities=9%  Similarity=0.036  Sum_probs=48.8

Q ss_pred             eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++....  ..+++|+....      ....+..|..+++.+.++  -.++.++..... .+..++||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~~   78 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN--PFLVGLHSCFQT-TSRLFLVIEYV   78 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC--CCEeeEEEEEEe-CCEEEEEEeCC
Confidence            47888999999998643  36888887531      123355677777666543  235555544332 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~~~L   83 (327)
T cd05617          79 NGGDL   83 (327)
T ss_pred             CCCcH
Confidence            99754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.84  E-value=0.00022  Score=65.25  Aligned_cols=74  Identities=12%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..++.+|.|..+.||+....  +..+++|.....    ....+..|++.++.+.+.   .+.+++..... ++..+++||
T Consensus         9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e   84 (309)
T cd07872           9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA---NIVTLHDIVHT-DKSLTLVFE   84 (309)
T ss_pred             EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCC---CcceEEEEEee-CCeEEEEEe
Confidence            44677899999999998764  236888876421    123455788888877542   34455554332 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |+++
T Consensus        85 ~~~~   88 (309)
T cd07872          85 YLDK   88 (309)
T ss_pred             CCCC
Confidence            9876

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=97.83  E-value=0.00016  Score=63.99  Aligned_cols=74  Identities=19%  Similarity=0.150  Sum_probs=51.2

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .+.++.|..+.+|+....+..+++|..+.. ....+..|...++.+.+.   .+.+++....  .+..+++|||++|+.+
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~--~~~~~~v~e~~~~~~L   85 (254)
T cd05083          11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHK---NLVRLLGVIL--HNGLYIVMELMSKGNL   85 (254)
T ss_pred             eeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCC---CcCeEEEEEc--CCCcEEEEECCCCCCH
Confidence            456788888899988766668999988643 334567788888777542   3344444332  2456999999998754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.82  E-value=0.00021  Score=66.22  Aligned_cols=73  Identities=15%  Similarity=0.125  Sum_probs=50.4

Q ss_pred             eeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .||.|....||+-.... + ...+|--...     ..+.+..|+.+|+.|.+   -.+-+++..-.. ++..|+||||++
T Consensus        17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H---~nIV~l~d~~~~-~~~i~lVMEyC~   92 (429)
T KOG0595|consen   17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH---PNIVRLLDCIED-DDFIYLVMEYCN   92 (429)
T ss_pred             hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC---cceeeEEEEEec-CCeEEEEEEeCC
Confidence            39999999999976543 3 5556654432     24567789999998864   234445544333 468899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+++
T Consensus        93 gGDL   96 (429)
T KOG0595|consen   93 GGDL   96 (429)
T ss_pred             CCCH
Confidence            9864

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=97.81  E-value=0.00019  Score=64.77  Aligned_cols=72  Identities=14%  Similarity=0.004  Sum_probs=45.9

Q ss_pred             eCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|..+.||++... ++ .+++|.....      ....+..|.++++.+.+.   .+.+++..... .+..+++|||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR---FIVSLAYAFQT-KTDLCLVMTIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCC---cEeeeeEEEcC-CCeEEEEEeCCC
Confidence            467888999998764 33 7888876531      113345678888777432   23333333222 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 ~g~L   80 (280)
T cd05608          77 GGDL   80 (280)
T ss_pred             CCCH
Confidence            9864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=97.81  E-value=6.6e-05  Score=69.56  Aligned_cols=74  Identities=8%  Similarity=0.016  Sum_probs=47.7

Q ss_pred             eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++....  ..+.+|+....      ....+..|..++..+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~   78 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFFVIEYV   78 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--CcCCceeeEEEe-CCEEEEEEeCC
Confidence            47888999999998643  36888887531      122345666666655443  234455544332 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~~~L   83 (329)
T cd05618          79 NGGDL   83 (329)
T ss_pred             CCCCH
Confidence            99753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=97.81  E-value=0.00042  Score=61.51  Aligned_cols=78  Identities=21%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-.+.++.|..+.+|++...++ .+++|......  ...+..|.++++.+.+.   .+.+++....  ....+++|||
T Consensus         7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~--~~~~~~v~e~   81 (260)
T cd05073           7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD---KLVKLHAVVT--KEPIYIITEF   81 (260)
T ss_pred             ceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCC---CcceEEEEEc--CCCeEEEEEe
Confidence            344566788899999999976544 78888775432  34567788888887543   2222232222  2578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        82 ~~~~~L   87 (260)
T cd05073          82 MAKGSL   87 (260)
T ss_pred             CCCCcH
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=97.81  E-value=0.00023  Score=64.09  Aligned_cols=78  Identities=21%  Similarity=0.194  Sum_probs=50.7

Q ss_pred             eeeeeeCCcccceeEEEEeC------CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294           54 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~  122 (328)
                      ..++.++.|..+.+|++...      +..+++|.....    ....+..|++.++.+.+.   .+++.+...... ....
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE---NIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCC---CeeeeeeEEecCCCCce
Confidence            44667888999999998632      236888987532    124567788888877542   234444333221 2467


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        84 ~lv~e~~~g~~L   95 (284)
T cd05079          84 KLIMEFLPSGSL   95 (284)
T ss_pred             EEEEEccCCCCH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=97.81  E-value=0.00011  Score=68.03  Aligned_cols=75  Identities=13%  Similarity=0.014  Sum_probs=47.0

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++....  ..+++|+....      ....+..|..++..+..   -.++.++..... .+..++|||
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~l~~~~~~-~~~~~lv~E   81 (331)
T cd05624           6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC---QWITTLHYAFQD-ENYLYLVMD   81 (331)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEEe
Confidence            5678999999999997643  36888876421      11224455555544422   124444443332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 y~~gg~L   88 (331)
T cd05624          82 YYVGGDL   88 (331)
T ss_pred             CCCCCcH
Confidence            9999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.79  E-value=6.4e-05  Score=73.98  Aligned_cols=78  Identities=19%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEE-eCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294           54 TKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~-~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~  122 (328)
                      .--+.+|.|.++.||+-. ...| .+.+|.++..    ..+...+|+++|+.|...   .+-+.++...+.     ...+
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~---NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHP---NIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCch---hhhhhcccCCccccCcccccc
Confidence            345668899999999987 4455 6778888652    356677899999988632   122222222211     3467


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      .++|||+.|+.+
T Consensus        93 vlvmEyC~gGsL  104 (732)
T KOG4250|consen   93 VLVMEYCSGGSL  104 (732)
T ss_pred             eEEEeecCCCcH
Confidence            999999999874

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=97.79  E-value=0.0002  Score=63.40  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=51.8

Q ss_pred             eeeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           55 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      -.+.++.|..+.+|++...+ +.+++|.....  ....+..|.+.++.+.+   -.+++++..... .+..+++||+++|
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~   83 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH---PNLVQLYGVCTK-QRPIFIVTEYMAN   83 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCceEEEEecCCC
Confidence            34567888888999987654 47999987542  23456678888887753   235555554332 4678999999998


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        84 ~~L   86 (256)
T cd05059          84 GCL   86 (256)
T ss_pred             CCH
Confidence            754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=97.79  E-value=0.0002  Score=66.38  Aligned_cols=76  Identities=13%  Similarity=0.042  Sum_probs=47.9

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -++.+|.|..+.||++....  ..+++|+....      ....+..|..++..+.+   -.++.++..... .+..++||
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~   80 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN---QWITTLHYAFQD-ENNLYLVM   80 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCEEEEEE
Confidence            35678999999999988653  36888886421      12235556665554432   234444443332 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        81 ey~~~g~L   88 (332)
T cd05623          81 DYYVGGDL   88 (332)
T ss_pred             eccCCCcH
Confidence            99999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=97.78  E-value=0.00036  Score=63.08  Aligned_cols=76  Identities=12%  Similarity=0.054  Sum_probs=49.8

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .++.+|.|..+.||++... ++ .+++|.....      ....+..|..+++.+.+.   .+..++..... ++..+++|
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~iv~~~~~~~~-~~~~~lv~   79 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR---FVVSLAYAYET-KDALCLVL   79 (285)
T ss_pred             EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC---cEEEEEEEEcc-CCeEEEEE
Confidence            4567899999999998763 33 7888876421      122355688888877542   23333333222 45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        80 e~~~~g~L   87 (285)
T cd05631          80 TIMNGGDL   87 (285)
T ss_pred             EecCCCcH
Confidence            99999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=97.78  E-value=0.00018  Score=66.23  Aligned_cols=74  Identities=12%  Similarity=0.024  Sum_probs=49.0

Q ss_pred             eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++....  ..+++|+....      ....+..|..+++.+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~   78 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH--PFLTQLHSCFQT-KDRLFFVMEYV   78 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence            46788889999987643  37889987531      123345677777766543  245556554332 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~~~L   83 (318)
T cd05570          79 NGGDL   83 (318)
T ss_pred             CCCCH
Confidence            99753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.78  E-value=0.00038  Score=64.57  Aligned_cols=76  Identities=18%  Similarity=0.052  Sum_probs=51.7

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.++.|..+.+|++... ++ .+++|+.... .   ...+..|+++++.+.+   -.+.+++..... ++..+++|||
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   84 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICMEH   84 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CcccceeEEEEE-CCEEEEEEec
Confidence            3566888999999998765 33 5667765432 1   2446788888888854   235555554433 4688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        85 ~~~~~L   90 (333)
T cd06650          85 MDGGSL   90 (333)
T ss_pred             CCCCcH
Confidence            999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=97.77  E-value=0.00031  Score=63.54  Aligned_cols=75  Identities=13%  Similarity=0.072  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|....+|++....  ..+++|.....      ....+..|++.++.+.+   -.+++++..... .+..+++||
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   81 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH---PFLVNLYGSFQD-DSNLYLVME   81 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCccceeeEEEc-CCeEEEEEe
Confidence            5678888889999987643  47888876531      12445678888877753   235555554332 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~~~L   88 (290)
T cd05580          82 YVPGGEL   88 (290)
T ss_pred             cCCCCCH
Confidence            9988753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PRK10345 hypothetical protein; Provisional

Probab=97.76  E-value=0.00022  Score=61.89  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             eeeeeeeCCcccceeEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcC--CCCcccceeccccCC--CceE-E
Q 020294           53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETR--TIRAPRPFKVGALPT--GGSY-I  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~--~v~VP~~~~~~~~~~--~~~~-~  124 (328)
                      ..+.+.+|.|....||. ...++..++|+....   ....+.+|+..++.|....  .-.+++++.+-.+..  |..+ +
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            44567899999999996 444556689886532   3456789999999996421  134777776655432  3323 6


Q ss_pred             EEee
Q 020294          125 IMEF  128 (328)
Q Consensus       125 v~e~  128 (328)
                      |+||
T Consensus        83 I~e~   86 (210)
T PRK10345         83 IADF   86 (210)
T ss_pred             EecC
Confidence            7888

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=97.76  E-value=0.0004  Score=61.11  Aligned_cols=73  Identities=19%  Similarity=0.167  Sum_probs=51.5

Q ss_pred             eeCCcccceeEEEEeC-----CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGTD-----AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~-----~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.|....+|++...     ...+++|......    ...+..|++.++.+..   -.+++++..... .+..+++|||
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~   77 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH---PNVVRLLGVCTE-EEPLYLVLEY   77 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC---CChheeeeeecC-CCceEEEEEe
Confidence            4677888899998875     3478999886532    3456678888887762   345555554433 4688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      .+|+++
T Consensus        78 ~~~~~L   83 (262)
T cd00192          78 MEGGDL   83 (262)
T ss_pred             ccCCcH
Confidence            999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=97.76  E-value=0.00034  Score=63.19  Aligned_cols=76  Identities=12%  Similarity=0.034  Sum_probs=49.7

Q ss_pred             eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .+.++.|..+.+|++...    +| .+++|.....       ....+..|.++++.+.++  -.++.++..... ++..+
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~   81 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-DTKLH   81 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC--CChhceeeEeec-CCeEE
Confidence            456788888999998752    33 6888877531       123456788888887654  234444433322 45778


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus        82 lv~e~~~~~~L   92 (290)
T cd05613          82 LILDYINGGEL   92 (290)
T ss_pred             EEEecCCCCcH
Confidence            99999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=97.76  E-value=0.00033  Score=64.47  Aligned_cols=27  Identities=30%  Similarity=0.294  Sum_probs=24.4

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||+++.++.+.|+|+.
T Consensus       115 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg  141 (321)
T cd05603         115 LNIIYRDLKPENILLDSQGHVVLTDFG  141 (321)
T ss_pred             CCeEeccCCHHHeEECCCCCEEEccCC
Confidence            469999999999999998888999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=97.76  E-value=0.00026  Score=65.30  Aligned_cols=27  Identities=30%  Similarity=0.272  Sum_probs=24.2

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||++++++...|+|+.
T Consensus       115 ~giiHrDlkp~Nili~~~~~~kl~DfG  141 (325)
T cd05602         115 LNIVYRDLKPENILLDSQGHIVLTDFG  141 (325)
T ss_pred             CCeEecCCCHHHeEECCCCCEEEccCC
Confidence            469999999999999988888999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=97.75  E-value=0.00051  Score=62.70  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=50.1

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cE--EEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SF--FVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~--vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.+|.|..+.+|++... ++ .+  .+|.....    ....+..|.+.+..+.++  -.+++++..... ++..+++||
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e   88 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIE   88 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEE
Confidence            355888999999999753 33 33  44443321    123466788888888554  246667665543 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        89 ~~~~~~L   95 (303)
T cd05088          89 YAPHGNL   95 (303)
T ss_pred             eCCCCcH
Confidence            9998753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=97.75  E-value=0.00063  Score=60.08  Aligned_cols=74  Identities=22%  Similarity=0.142  Sum_probs=50.5

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|..+.+|++...  +..+++|..+..    ....+..|...++.+.+.   .+++++..... .+..+++|||+
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~   80 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHP---NIVAFKESFEA-DGHLYIVMEYC   80 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEE-CCEEEEEEeeC
Confidence            466888889999999764  348899986421    124456677777776542   34555554433 46889999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        81 ~~~~   84 (255)
T cd08219          81 DGGD   84 (255)
T ss_pred             CCCc
Confidence            9875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=0.00028  Score=65.26  Aligned_cols=27  Identities=26%  Similarity=0.193  Sum_probs=24.3

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||+++.++...|+|+.
T Consensus       115 ~~ivHrDlkp~Nili~~~~~~kl~Dfg  141 (330)
T cd05586         115 YDIVYRDLKPENILLDATGHIALCDFG  141 (330)
T ss_pred             CCeEeccCCHHHeEECCCCCEEEecCC
Confidence            369999999999999988888999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=97.74  E-value=0.00051  Score=60.71  Aligned_cols=75  Identities=17%  Similarity=0.111  Sum_probs=52.6

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      .+.++.|..+.+|+....+..+++|......  ...+..|...++.+.+.   .+.+++..... .+..+++|||.+|..
T Consensus        11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~~~~~   86 (256)
T cd05039          11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP---NLVQLLGVVLQ-GNPLYIVTEYMAKGS   86 (256)
T ss_pred             eeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc---ceeeeEEEEcC-CCCeEEEEEecCCCc
Confidence            4567888889999998877789999987532  34566788888877542   23344443332 467899999999875


Q ss_pred             C
Q 020294          134 S  134 (328)
Q Consensus       134 ~  134 (328)
                      +
T Consensus        87 L   87 (256)
T cd05039          87 L   87 (256)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=97.73  E-value=0.00041  Score=64.00  Aligned_cols=27  Identities=30%  Similarity=0.278  Sum_probs=24.4

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||++++++...|+|+.
T Consensus       115 ~givH~Dlkp~NIll~~~~~~kL~DfG  141 (325)
T cd05604         115 INIVYRDLKPENILLDSQGHVVLTDFG  141 (325)
T ss_pred             CCeeecCCCHHHeEECCCCCEEEeecC
Confidence            469999999999999988888999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=97.72  E-value=0.00048  Score=62.03  Aligned_cols=73  Identities=14%  Similarity=0.116  Sum_probs=48.2

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|++.... + .+++|.....     ....+..|+++++.+.+.   .+.+++..... ++..++||||
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~   81 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE---NIVELKEAFRR-RGKLYLVFEY   81 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc---cccchhhhEec-CCEEEEEEec
Confidence            5567888999999998753 3 6888876431     134466788888877542   23333332222 4678999999


Q ss_pred             ecCC
Q 020294          129 IEFG  132 (328)
Q Consensus       129 l~G~  132 (328)
                      ++|+
T Consensus        82 ~~~~   85 (287)
T cd07848          82 VEKN   85 (287)
T ss_pred             CCCC
Confidence            9985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=97.72  E-value=0.00042  Score=64.48  Aligned_cols=107  Identities=20%  Similarity=0.181  Sum_probs=57.5

Q ss_pred             cccchhhhhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEE-EeCCc-cEEEEecCCC----------Ccch
Q 020294           22 ISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRY-GTDAG-SFFVKTNRSI----------GPSM   89 (328)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v-~~~~~-~~vlK~~~~~----------~~~~   89 (328)
                      .+.++...+++..++.+.=.-.-+.. .+..+. .+.+|.|....|=.. ...+| .|.+|+....          ....
T Consensus       145 is~p~~~~~v~~~~s~d~~~~~pks~-~d~yii-~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~  222 (475)
T KOG0615|consen  145 ISIPALKIFVFEDLSRDSSKVPPKSF-NDYYII-SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRD  222 (475)
T ss_pred             eccchhheeeeecccchhccCccchh-cceeEe-eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhh
Confidence            34455556666555444211111111 122232 355777777765543 33344 7888887521          1122


Q ss_pred             HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           90 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        90 ~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      ++.|.++|+.|.+=   .+-++...-.. +...||||||++|+.+
T Consensus       223 v~~EieILkkL~HP---~IV~~~d~f~~-~ds~YmVlE~v~GGeL  263 (475)
T KOG0615|consen  223 VQNEIEILKKLSHP---NIVRIKDFFEV-PDSSYMVLEYVEGGEL  263 (475)
T ss_pred             hHHHHHHHHhcCCC---CEEEEeeeeec-CCceEEEEEEecCccH
Confidence            46899999988541   12233322211 3566999999999854

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=97.72  E-value=0.00046  Score=61.23  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=52.1

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .-.+.++.|..+.+|.....++ .+.+|.....  ..+.+..|...++.+.+   -.+++++..... ....+++|||++
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   82 (256)
T cd05113           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH---EKLVQLYGVCTK-QRPIYIVTEYMS   82 (256)
T ss_pred             EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC---CCeeeEEEEEcc-CCCcEEEEEcCC
Confidence            3456788898999999876554 6888876542  23446678877777643   245566655433 356799999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        83 ~~~l   86 (256)
T cd05113          83 NGCL   86 (256)
T ss_pred             CCcH
Confidence            8753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.71  E-value=0.00048  Score=61.66  Aligned_cols=78  Identities=24%  Similarity=0.181  Sum_probs=51.4

Q ss_pred             eeeeeeCCcccceeEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294           54 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~  122 (328)
                      .-++.++.|..+.+|++..+      ...+++|......    ...+..|++.++.+..   -.+++++...... ....
T Consensus         7 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~---~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           7 KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH---ENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC---CChheEEeeeecCCCCce
Confidence            33567888889999998753      2378899876432    2456778877777743   2344555443321 2367


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        84 ~lv~e~~~~~~l   95 (284)
T cd05038          84 RLIMEYLPSGSL   95 (284)
T ss_pred             EEEEecCCCCCH
Confidence            999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=97.71  E-value=0.00021  Score=63.61  Aligned_cols=74  Identities=19%  Similarity=0.060  Sum_probs=49.9

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      +.++.|..+.+|+....++ .+++|......         ...+..|++.++.+.+   ..+++++..... .+..++++
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~   81 (265)
T cd06631           6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH---VNIVQYLGTCLD-DNTISIFM   81 (265)
T ss_pred             ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC---CCEeeEeeEeec-CCeEEEEE
Confidence            4577888899999877555 68888764211         1346677777777753   245555554433 46889999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        82 e~~~~~~L   89 (265)
T cd06631          82 EFVPGGSI   89 (265)
T ss_pred             ecCCCCcH
Confidence            99999753

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=97.71  E-value=0.00037  Score=63.87  Aligned_cols=137  Identities=22%  Similarity=0.271  Sum_probs=82.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-CC---cchHHHHHHHHHHHHhcCCCCcccceecc-cc-CCC-ce
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IG---PSMFEGEALGLGAMYETRTIRAPRPFKVG-AL-PTG-GS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~-~~-~~~-~~  122 (328)
                      .+..+..+|.|....||++... ++ -|.+|.-.. ..   ...+.+|.++++.-      ..|-++.+. .+ .++ .-
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNGEEI  153 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCCceE
Confidence            5566777899999999999864 34 567776632 11   23455676665543      334444321 11 145 48


Q ss_pred             EEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294          123 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  202 (328)
Q Consensus       123 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  202 (328)
                      .++|||.+|+.+           ..++....              ..|          +    ..+.             
T Consensus       154 sI~mEYMDgGSL-----------d~~~k~~g--------------~i~----------E----~~L~-------------  181 (364)
T KOG0581|consen  154 SICMEYMDGGSL-----------DDILKRVG--------------RIP----------E----PVLG-------------  181 (364)
T ss_pred             EeehhhcCCCCH-----------HHHHhhcC--------------CCC----------H----HHHH-------------
Confidence            999999999973           33333211              000          0    0011             


Q ss_pred             HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                         ....++++.+..+ .   ....+||+|++|.|||+...|++.|.||.+
T Consensus       182 ---~ia~~VL~GL~YL-h---~~~~IIHRDIKPsNlLvNskGeVKicDFGV  225 (364)
T KOG0581|consen  182 ---KIARAVLRGLSYL-H---EERKIIHRDIKPSNLLVNSKGEVKICDFGV  225 (364)
T ss_pred             ---HHHHHHHHHHHHH-h---hccCeeeccCCHHHeeeccCCCEEeccccc
Confidence               1122334444432 2   236899999999999999989999999863

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=97.70  E-value=0.00016  Score=66.62  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=46.8

Q ss_pred             eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||++...+  ..+++|.....      .......|..++..+.++  -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~ey~   78 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHLYCTFQT-KENLFFVMEYL   78 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CcCcceEEEEEe-CCEEEEEEeCC
Confidence            47888899999998643  36888976531      122334566665544333  234555554333 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        79 ~~g~L   83 (316)
T cd05619          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            99854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=97.70  E-value=0.00072  Score=59.31  Aligned_cols=75  Identities=15%  Similarity=0.084  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|....+|++...  +..+++|.....     ....+..|.++++.+..   -.+.+++..... .+..++++||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~~~~~~~~-~~~~~lv~e~   80 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH---PNIIKYYESFEE-KGKLCIVMEY   80 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC---CChhheEEEEec-CCEEEEEEEe
Confidence            456778888999999875  348999987532     12346677777777753   224444433222 3688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        81 ~~~~~L   86 (258)
T cd08215          81 ADGGDL   86 (258)
T ss_pred             cCCCcH
Confidence            998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=97.70  E-value=0.00061  Score=61.11  Aligned_cols=76  Identities=16%  Similarity=0.077  Sum_probs=48.2

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.++.|..+.+|+.... + ..+++|......    ...+..|...++.+.+   -.+.+++..... .+..++||||
T Consensus         8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   83 (277)
T cd06641           8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIMEY   83 (277)
T ss_pred             hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC---CCEeEEEEEEEe-CCeEEEEEEe
Confidence            3456888888999998653 3 378889865321    1335566666666543   124444443322 4578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        84 ~~~~~l   89 (277)
T cd06641          84 LGGGSA   89 (277)
T ss_pred             CCCCcH
Confidence            998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.68  E-value=0.00052  Score=64.81  Aligned_cols=134  Identities=19%  Similarity=0.143  Sum_probs=83.3

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ...+|.|..+.|+.....  +..+.+|+....        ....+.+|..+++.+..+.  .+-+++.+-.+ ....++|
T Consensus        22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~Hp--nI~~l~ev~~t-~~~~~iv   98 (370)
T KOG0583|consen   22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHP--NIIRLLEVFAT-PTKIYIV   98 (370)
T ss_pred             eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCC--CEeEEEEEEec-CCeEEEE
Confidence            556888999999998543  347888875431        1344667998888887442  34444444333 3458999


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      |||+.|+.+          +..+.....               +.      +        .                +..
T Consensus        99 mEy~~gGdL----------~~~i~~~g~---------------l~------E--------~----------------~ar  123 (370)
T KOG0583|consen   99 MEYCSGGDL----------FDYIVNKGR---------------LK------E--------D----------------EAR  123 (370)
T ss_pred             EEecCCccH----------HHHHHHcCC---------------CC------h--------H----------------HHH
Confidence            999999532          333333110               00      0        0                001


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccc
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA  252 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~  252 (328)
                      ....++++.+...     ...+++|+||+++|+|++.+ +...|+||+
T Consensus       124 ~~F~Qlisav~y~-----H~~gi~HRDLK~ENilld~~~~~~Kl~DFG  166 (370)
T KOG0583|consen  124 KYFRQLISAVAYC-----HSRGIVHRDLKPENILLDGNEGNLKLSDFG  166 (370)
T ss_pred             HHHHHHHHHHHHH-----HhCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence            2333444444321     24589999999999999998 788999985

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=97.68  E-value=0.00089  Score=59.52  Aligned_cols=78  Identities=23%  Similarity=0.169  Sum_probs=51.2

Q ss_pred             eeeeeeeCCcccceeEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ..-...++.|....+|++...  +..+++|......  ...+..|.+.++.+.+.   .+.+++..... ++..+++|||
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~   83 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP---NLVQLLGVCTR-EPPFYIITEF   83 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCC---ChhheEEEEcC-CCCcEEEEEe
Confidence            344566788888899997654  3478889876432  23466788888877542   33344443322 4677999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        84 ~~~~~L   89 (263)
T cd05052          84 MTYGNL   89 (263)
T ss_pred             CCCCcH
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=97.68  E-value=0.00066  Score=63.23  Aligned_cols=80  Identities=18%  Similarity=0.179  Sum_probs=52.3

Q ss_pred             eeeeeeeCCcccceeEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-.+.+|.|..+.||+...      .+ ..+.+|+.....    ...+..|+.++..+.++  -.+.+++.......+.
T Consensus         9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~   86 (343)
T cd05103           9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGGP   86 (343)
T ss_pred             hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC--ccHhhhcceeecCCCc
Confidence            33456689999999999852      12 368888875321    23456788888888543  2355555443322356


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus        87 ~~lv~ey~~~g~L   99 (343)
T cd05103          87 LMVIVEFCKFGNL   99 (343)
T ss_pred             eEEEEeccCCCcH
Confidence            7899999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=97.68  E-value=0.00057  Score=61.48  Aligned_cols=72  Identities=14%  Similarity=0.016  Sum_probs=45.1

Q ss_pred             eCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|..+.||++.... + .|.+|.....      .......|.++++.+.+   -.+.+++..... +...+++|||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS---PFIVNLAYAFES-KTHLCLVMSLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC---CcEEEEEEEEec-CCeEEEEEecCC
Confidence            4678889999988643 3 7888876421      12234457888877743   123334333222 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 g~~L   80 (277)
T cd05607          77 GGDL   80 (277)
T ss_pred             CCCH
Confidence            9764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=97.68  E-value=0.00069  Score=60.05  Aligned_cols=75  Identities=12%  Similarity=-0.013  Sum_probs=50.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|..+.+|++... ++ .+++|....      .....+..|++.++.+.+   -.+++++..... ++..+++||
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   82 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH---PNVIKYLASFIE-NNELNIVLE   82 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCeeeeeeeeec-CCeEEEEEe
Confidence            455788888999999875 33 788886642      113456678887777743   234445544332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+++
T Consensus        83 ~~~~~~L   89 (267)
T cd08224          83 LADAGDL   89 (267)
T ss_pred             cCCCCCH
Confidence            9999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=97.68  E-value=0.00038  Score=62.78  Aligned_cols=76  Identities=12%  Similarity=0.001  Sum_probs=49.4

Q ss_pred             eeeeCCcccceeEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .+.++.|..+.+|++...    + ..+++|.....       ....+..|.++++.+.++  -.+++++..... +...+
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~~~~~~~~-~~~~~   81 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC--PFLVTLHYAFQT-DTKLH   81 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC--cchhhhheeeec-CCEEE
Confidence            466888999999998642    2 36888876521       123456788888888654  234444433222 35778


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus        82 lv~e~~~~~~L   92 (288)
T cd05583          82 LILDYVNGGEL   92 (288)
T ss_pred             EEEecCCCCcH
Confidence            99999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=97.67  E-value=0.00052  Score=62.44  Aligned_cols=74  Identities=12%  Similarity=0.075  Sum_probs=50.3

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..++.++.|..+.+|++...  +..+++|.....    ....+..|...++.|.+   -.+.+++..... .+..+++||
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~nI~~~~~~~~~-~~~~~lv~e   84 (301)
T cd07873           9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE   84 (301)
T ss_pred             EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC---CCcceEEEEEec-CCeEEEEEe
Confidence            44677899999999998764  347888876521    12345678888887754   235555554433 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |++|
T Consensus        85 ~~~~   88 (301)
T cd07873          85 YLDK   88 (301)
T ss_pred             cccc
Confidence            9876

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=97.67  E-value=0.00054  Score=61.72  Aligned_cols=77  Identities=13%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .-...++.|....+|++...  +..+++|......  ...+..|.+.++.+.+   -.+++++..... .+..++++||+
T Consensus        22 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~   97 (286)
T cd06614          22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH---PNIVDYYDSYLV-GDELWVVMEYM   97 (286)
T ss_pred             hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC---CCeeEEEEEEEE-CCEEEEEEecc
Confidence            33456788888899998775  4588999876432  3456678877777754   235555544332 46889999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        98 ~~~~L  102 (286)
T cd06614          98 DGGSL  102 (286)
T ss_pred             CCCcH
Confidence            98754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=97.67  E-value=0.0009  Score=58.35  Aligned_cols=74  Identities=15%  Similarity=0.077  Sum_probs=51.7

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .+.++.|....+|++... + ..+++|..+..   ....+..|.+.++.+..   -.+++++..... +...++++||++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~   80 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH---PNIVKYYGSYLK-KDELWIVMEFCS   80 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEEecCC
Confidence            456788888999999875 3 37889988643   23456678877777753   345556554332 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |..
T Consensus        81 ~~~   83 (253)
T cd05122          81 GGS   83 (253)
T ss_pred             CCc
Confidence            875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.67  E-value=0.00058  Score=61.71  Aligned_cols=79  Identities=18%  Similarity=0.127  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v  125 (328)
                      .-++.++.|..+.+|++... ++ .+++|.....  ....+..|...++.+.++  -.+++++......    .+..+++
T Consensus        25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~~~~lv  102 (291)
T cd06639          25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--PNVVKFYGMFYKADKLVGGQLWLV  102 (291)
T ss_pred             EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--CCeEEEEEEEEeccccCCCeeEEE
Confidence            33456788888999998874 33 7888887542  234566788888877543  2455555543221    2468999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       103 ~ey~~~~sL  111 (291)
T cd06639         103 LELCNGGSV  111 (291)
T ss_pred             EEECCCCcH
Confidence            999999753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=97.67  E-value=0.00023  Score=64.97  Aligned_cols=75  Identities=15%  Similarity=-0.012  Sum_probs=49.6

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|..+.+|+.....  ..+++|.....      ....+..|.+.++.+.+   -.+++++..... .+..+++||
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN---PFVVSMFCSFET-KRHLCMVME   81 (305)
T ss_pred             eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEec-CCEEEEEEe
Confidence            5668888889999987643  37888876532      12345567777776643   235556554332 457799999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~g~~L   88 (305)
T cd05609          82 YVEGGDC   88 (305)
T ss_pred             cCCCCcH
Confidence            9999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=97.66  E-value=0.00061  Score=61.45  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=47.2

Q ss_pred             eeeeCCcccceeEEEEe-C-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceE
Q 020294           56 ICPVGGGCINLASRYGT-D-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~  123 (328)
                      ++.++.|..+.||++.. . ++ .+++|.....     ....+..|.+.++.+.....-.+++++.....    ..+..+
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~   85 (290)
T cd07862           6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT   85 (290)
T ss_pred             eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence            45688999999999975 2 34 4677865421     12235568888887754222235555543221    135679


Q ss_pred             EEEeeecC
Q 020294          124 IIMEFIEF  131 (328)
Q Consensus       124 ~v~e~l~G  131 (328)
                      ++||+++|
T Consensus        86 lv~e~~~~   93 (290)
T cd07862          86 LVFEHVDQ   93 (290)
T ss_pred             EEEccCCC
Confidence            99999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=97.66  E-value=0.00073  Score=59.50  Aligned_cols=75  Identities=19%  Similarity=0.129  Sum_probs=48.9

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|....+|++....  ..+++|.....     ....+..|.+.++.+.+   -.+.+++..... .+..+++|||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   80 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS---SYIIRYYESFLD-KGKLNIVMEY   80 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC---CCeehheeeecc-CCEEEEEEEe
Confidence            3557788888999998643  37888876421     13345567777776643   234444544332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        81 ~~~~~L   86 (256)
T cd08529          81 AENGDL   86 (256)
T ss_pred             CCCCcH
Confidence            999753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.65  E-value=0.00081  Score=61.51  Aligned_cols=76  Identities=17%  Similarity=0.027  Sum_probs=50.4

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -.+.++.|....+|++... ++ .+++|......    ...+..|+++++.+.+.   .+.+++..... ++..+++|||
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~ey   80 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSP---YIVGFYGAFYS-DGEISICMEH   80 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCC---CCCeEEEEEee-CCEEEEEeec
Confidence            4566888999999998764 33 67777765321    23356788888877432   34445543322 4688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        81 ~~~~~L   86 (308)
T cd06615          81 MDGGSL   86 (308)
T ss_pred             cCCCcH
Confidence            999754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.65  E-value=0.00069  Score=60.90  Aligned_cols=79  Identities=20%  Similarity=0.161  Sum_probs=51.5

Q ss_pred             eeeeeeeCCcccceeEEEEeC-----Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294           53 ITKICPVGGGCINLASRYGTD-----AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-----~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~  122 (328)
                      ..-++.++.|..+.+|++...     ++ .+++|......   ...+..|.++++.+.+   -.+++.+...... ....
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEccCCCCce
Confidence            334667889999999998632     23 68888875432   2356778888887753   2344454433221 2467


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+++
T Consensus        83 ~lv~e~~~~~~L   94 (284)
T cd05081          83 RLVMEYLPYGSL   94 (284)
T ss_pred             EEEEEecCCCCH
Confidence            899999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=97.65  E-value=0.00033  Score=62.31  Aligned_cols=75  Identities=12%  Similarity=-0.014  Sum_probs=49.1

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|..+.+|+....  +..+++|.....   .   ...+..|++.++.+.+   -.+++++..... .+..++++|
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   82 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH---PNVIKYLDSFIE-DNELNIVLE   82 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC---cceeeeeeeEEE-CCeEEEEEE
Confidence            455788889999998763  347888865421   1   2335668888777743   234455544332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        83 ~~~~~~L   89 (267)
T cd08228          83 LADAGDL   89 (267)
T ss_pred             ecCCCcH
Confidence            9998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=97.65  E-value=0.00068  Score=63.67  Aligned_cols=73  Identities=19%  Similarity=0.197  Sum_probs=50.4

Q ss_pred             eCCcccceeEEEEeCCcc-EEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           59 VGGGCINLASRYGTDAGS-FFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~~~-~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +|.|....||+..-.... ..+|+.....     ...+..|+.+|..|.+-   .|-+.+.+...+.+...+||||++|+
T Consensus        49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp---NIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP---NIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             cccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC---CeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            788999999988766555 6777775421     23788999999887652   23335554443223579999999998


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus       126 sL  127 (362)
T KOG0192|consen  126 SL  127 (362)
T ss_pred             cH
Confidence            63

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.65  E-value=8.3e-05  Score=71.40  Aligned_cols=72  Identities=13%  Similarity=0.107  Sum_probs=53.2

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEe-cC----CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKT-NR----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~-~~----~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..++.||.|.++.||+|...+. -|++|. ..    ......+..|.+.|..|..+  ..|-++|.+.-. ++.-|||||
T Consensus       364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE  440 (677)
T KOG0596|consen  364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVME  440 (677)
T ss_pred             hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEee
Confidence            3466788899999999987653 454443 21    12345688999999999875  678888887655 789999999


Q ss_pred             e
Q 020294          128 F  128 (328)
Q Consensus       128 ~  128 (328)
                      +
T Consensus       441 ~  441 (677)
T KOG0596|consen  441 C  441 (677)
T ss_pred             c
Confidence            7

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=97.64  E-value=0.00097  Score=58.82  Aligned_cols=78  Identities=19%  Similarity=0.148  Sum_probs=53.5

Q ss_pred             eeeeeeeCCcccceeEEEEeC-CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ..-.+.++.|..+.+|+.... +..+.+|.....  ....+..|.+.++.+.+.   .+.+++..... .+..+++|||+
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~   81 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHP---KLVQLYGVCTE-RSPICLVFEFM   81 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCC---CeeeEEEEEcc-CCceEEEEEcC
Confidence            344567888888999998765 447888876542  234577888888887542   34455544332 45779999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        82 ~~~~L   86 (256)
T cd05112          82 EHGCL   86 (256)
T ss_pred             CCCcH
Confidence            99753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.64  E-value=0.00063  Score=61.01  Aligned_cols=74  Identities=14%  Similarity=0.020  Sum_probs=50.4

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      +.++.|..+.+|++...  ...+++|......   ...+..|+++++.+.+   -.+++++..... .+..+++|||++|
T Consensus        11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~   86 (280)
T cd06611          11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH---PNIVGLYEAYFY-ENKLWILIEFCDG   86 (280)
T ss_pred             HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEec-CCeEEEEeeccCC
Confidence            34677888999999764  2378889875432   2345678888777753   245666654433 4678999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        87 ~~L   89 (280)
T cd06611          87 GAL   89 (280)
T ss_pred             CcH
Confidence            753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=97.64  E-value=0.0016  Score=59.22  Aligned_cols=79  Identities=11%  Similarity=0.080  Sum_probs=51.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-.-++.++.|..+.+|+....  +..+.+|.....   ....+..|..+++.+.+   -.+.+++..... ....++||
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~v~~~~~~~~~-~~~~~lv~   96 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM   96 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC---CCEeeEEEEEEe-CCEEEEee
Confidence            3445667888999999998753  347888866532   23456678887776643   234445443322 45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        97 e~~~~~~L  104 (296)
T cd06654          97 EYLAGGSL  104 (296)
T ss_pred             cccCCCCH
Confidence            99999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=97.64  E-value=0.00077  Score=60.87  Aligned_cols=76  Identities=13%  Similarity=0.067  Sum_probs=49.8

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ..+.+|.|..+.+|+.... ++ .+++|.....      ....+..|+++++.+.+.   .++.++..... ++..+++|
T Consensus         4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~   79 (285)
T cd05632           4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ---FVVNLAYAYET-KDALCLVL   79 (285)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc---CceeEEEEEec-CCEEEEEE
Confidence            3566888999999998764 33 6888876431      123355688888888542   33334333222 45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        80 e~~~~~~L   87 (285)
T cd05632          80 TIMNGGDL   87 (285)
T ss_pred             EeccCccH
Confidence            99998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=97.64  E-value=0.0005  Score=63.39  Aligned_cols=27  Identities=30%  Similarity=0.294  Sum_probs=24.3

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||++++++...|+|+.
T Consensus       115 ~givH~dikp~NIll~~~~~~kl~Dfg  141 (323)
T cd05575         115 LNIIYRDLKPENILLDSQGHVVLTDFG  141 (323)
T ss_pred             CCeEeCCCCHHHeEECCCCcEEEeccC
Confidence            369999999999999988888999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.63  E-value=0.00094  Score=59.75  Aligned_cols=78  Identities=17%  Similarity=0.103  Sum_probs=48.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.+...++.|..+.+|.+... + ..|++|.........  .|......+.++  -.+++++..... .+..++||||+
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~~~h--~~iv~~~~~~~~-~~~~~iv~e~~   91 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLMKDN--PNFIKLYYSVTT-LKGHVLIMDYI   91 (267)
T ss_pred             ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHhhcC--CCEEEEEEEEec-CCeeEEEEEcC
Confidence            4444444899999999998864 2 378888876422111  233333333333  356666655433 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+++
T Consensus        92 ~~~~L   96 (267)
T PHA03390         92 KDGDL   96 (267)
T ss_pred             CCCcH
Confidence            98753

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.63  E-value=0.00055  Score=65.17  Aligned_cols=70  Identities=11%  Similarity=-0.032  Sum_probs=48.0

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      -++.++.|..+.||++... . ..+++|....   ..+..|+++++.|.+.   .+.+++..... .+..+++++++.|
T Consensus        96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~Hp---nIv~~~~~~~~-~~~~~lv~e~~~~  167 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHP---SIIQLKGTFTY-NKFTCLILPRYKT  167 (391)
T ss_pred             EEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCC---CCCCEeEEEEE-CCeeEEEEecCCC
Confidence            3567899999999998764 3 3778887542   3467899999988652   34445543322 4577899998754

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=97.63  E-value=0.00082  Score=60.68  Aligned_cols=79  Identities=16%  Similarity=0.028  Sum_probs=52.2

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceecccc-CCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~~~~~~~v  125 (328)
                      ...++.+|.|....+|++...+  ..+++|.....    ....+..|.+.++.+.+.   .+.+++..... ..+..+++
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSP---YIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCC---CeeeeeeEEEccCCCeEEEE
Confidence            4567788999999999998743  47888887632    123466788887777542   23334432211 13467999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        80 ~e~~~~~~L   88 (287)
T cd06621          80 MEYCEGGSL   88 (287)
T ss_pred             EEecCCCCH
Confidence            999999854

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=97.62  E-value=0.0021  Score=56.71  Aligned_cols=77  Identities=16%  Similarity=0.053  Sum_probs=51.4

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-.+.++.|..+.+|++...  +..+++|.....   ....+..|.+.++.+.+.   .+.+++..... .+..+++|||
T Consensus         6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~l~~e~   81 (262)
T cd06613           6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHP---NIVAYFGSYLR-RDKLWIVMEY   81 (262)
T ss_pred             EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCC---ChhceEEEEEe-CCEEEEEEeC
Confidence            34567888889999998764  347888987642   234566777777777442   34444443322 4578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        82 ~~~~~l   87 (262)
T cd06613          82 CGGGSL   87 (262)
T ss_pred             CCCCcH
Confidence            999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.62  E-value=0.00071  Score=60.97  Aligned_cols=75  Identities=11%  Similarity=0.020  Sum_probs=43.6

Q ss_pred             eCCcccceeEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|..+.+|++... ++ .+.+|......      ......|...++.+.....-.++.++..... .+..++||||++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~   80 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLMN   80 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecCC
Confidence            577888999998764 33 78888765321      1223344444555443211123333333222 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        81 ~~~L   84 (279)
T cd05633          81 GGDL   84 (279)
T ss_pred             CCCH
Confidence            9864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.62  E-value=0.00055  Score=64.17  Aligned_cols=71  Identities=11%  Similarity=-0.038  Sum_probs=48.7

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .-++.++.|....||+.....  ..+++|+...   .....|+.+++.+.+.   .+++++..... .+..+++|+++.|
T Consensus        69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~---~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~~  141 (357)
T PHA03209         69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK---GTTLIEAMLLQNVNHP---SVIRMKDTLVS-GAITCMVLPHYSS  141 (357)
T ss_pred             EEEEEecCCCCeEEEEEEECCCCceEEEEeCCc---cccHHHHHHHHhCCCC---CCcChhheEEe-CCeeEEEEEccCC
Confidence            345678999999999988653  3788898643   2234688888887642   35555544332 4577999999876

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=97.62  E-value=0.00075  Score=60.97  Aligned_cols=75  Identities=12%  Similarity=0.059  Sum_probs=48.5

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.++.|..+.+|++... ++ .+.+|.....      ....+..|+.+++.+.+.   .++..+..... ....+++||
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e   80 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT   80 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCC---CEeeeeeeecC-CCeEEEEEe
Confidence            456888999999998764 33 6778876431      112345688888877542   23333333322 357899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        81 ~~~~~~L   87 (285)
T cd05605          81 LMNGGDL   87 (285)
T ss_pred             ccCCCcH
Confidence            9999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=97.61  E-value=0.0005  Score=61.33  Aligned_cols=75  Identities=15%  Similarity=0.030  Sum_probs=50.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----C--------cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----G--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~--------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+.+|.|..+.+|+.... ++ .+++|.....     .        .+.+..|...++.+.+   -.+++++..... .+
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~   81 (272)
T cd06629           6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH---LNIVQYLGFETT-EE   81 (272)
T ss_pred             cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC---CCcceEEEEecc-CC
Confidence            456888999999998643 33 7888865421     0        1235567777777743   345666665443 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+++
T Consensus        82 ~~~lv~e~~~~~~L   95 (272)
T cd06629          82 YLSIFLEYVPGGSI   95 (272)
T ss_pred             ceEEEEecCCCCcH
Confidence            78999999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.60  E-value=0.00086  Score=60.32  Aligned_cols=78  Identities=24%  Similarity=0.237  Sum_probs=49.9

Q ss_pred             eeeeeeCCcccceeEEEEe-----CC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294           54 TKICPVGGGCINLASRYGT-----DA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~-----~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~  122 (328)
                      ..++.++.|..+.+|.+..     .+ ..+++|.....    ....+..|+++++.+.+.   .+++++...... ....
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHE---NIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCC---CEeeEEEEEecCCCceE
Confidence            4466788888899987542     12 36888987642    134456788888877532   355555543221 2457


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        84 ~lv~e~~~~~~l   95 (283)
T cd05080          84 QLIMEYVPLGSL   95 (283)
T ss_pred             EEEecCCCCCCH
Confidence            899999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.60  E-value=0.0012  Score=59.44  Aligned_cols=76  Identities=16%  Similarity=0.110  Sum_probs=48.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~  124 (328)
                      ++.+|.|..+.||++... ++ .+++|.....     .......|.+.++.|.....-.+.+++......    ....++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l   84 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL   84 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence            456888999999999764 34 6788876421     122355788888888643222355555433211    245789


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +||++++
T Consensus        85 v~e~~~~   91 (288)
T cd07863          85 VFEHVDQ   91 (288)
T ss_pred             EEccccc
Confidence            9999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=97.60  E-value=0.0011  Score=60.90  Aligned_cols=93  Identities=12%  Similarity=0.040  Sum_probs=58.0

Q ss_pred             ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCC
Q 020294           36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~v~  107 (328)
                      +++++..+........-......++.|..+.+|++... + ..+++|......   .   ..+..|.+.++.+.+   ..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~   82 (313)
T cd06633           6 KDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH---PN   82 (313)
T ss_pred             CCHHHHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC---CC
Confidence            56667777655533323344566899999999998753 3 378888765321   1   234567777777743   23


Q ss_pred             cccceeccccCCCceEEEEeeecCC
Q 020294          108 APRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus       108 VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +++++..... ....+++|||+.|.
T Consensus        83 iv~~~~~~~~-~~~~~lv~e~~~~~  106 (313)
T cd06633          83 TIEYKGCYLK-EHTAWLVMEYCLGS  106 (313)
T ss_pred             CccEEEEEEe-CCEEEEEEecCCCC
Confidence            4455544332 35789999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.60  E-value=0.00089  Score=59.27  Aligned_cols=74  Identities=18%  Similarity=0.021  Sum_probs=48.7

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+.++.|....+|++...  ...+++|..+..        ....+..|.+.++.+.+.   .+.+++..... ....+++
T Consensus         7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v   82 (263)
T cd06625           7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHE---RIVQYYGCLRD-DETLSIF   82 (263)
T ss_pred             cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCC---CeeeeEEEEcc-CCeEEEE
Confidence            456788888899998753  247888876421        113456677777776432   34455554433 4588999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      +|+++|+.
T Consensus        83 ~e~~~~~~   90 (263)
T cd06625          83 MEYMPGGS   90 (263)
T ss_pred             EEECCCCc
Confidence            99999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=97.60  E-value=0.00096  Score=59.89  Aligned_cols=72  Identities=19%  Similarity=0.122  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|+.... + ..+++|.....     ....+..|+..++.+.+   -.+++++..... ++..++||||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~   80 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH---PNIVCLQDVLMQ-ESRLYLIFEF   80 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC---CCEeeeEEEEee-CCeEEEEEec
Confidence            566888889999999764 2 37888876421     12346678888887753   345555554332 4678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        81 ~~~   83 (285)
T cd07861          81 LSM   83 (285)
T ss_pred             CCC
Confidence            986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.59  E-value=0.00067  Score=66.04  Aligned_cols=69  Identities=12%  Similarity=-0.009  Sum_probs=48.8

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      ...++.|..+.||+.....  ..+++|....   ..+..|+++++.|.+.   .|.+++..... .+..+++|++..|
T Consensus       174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~Hp---nIv~l~~~~~~-~~~~~lv~e~~~~  244 (461)
T PHA03211        174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSHP---AVLALLDVRVV-GGLTCLVLPKYRS  244 (461)
T ss_pred             EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCCC---CCCcEEEEEEE-CCEEEEEEEccCC
Confidence            4568889999999988754  3688886432   3356899999988642   45566655433 4678999998865

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=97.59  E-value=0.0013  Score=59.29  Aligned_cols=79  Identities=16%  Similarity=0.161  Sum_probs=51.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-.+.+|.|....+|+....+       ..+++|......    ...+..|.++++.+.++  -.+-+++..... .+.
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~   90 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGVCTQ-EGP   90 (293)
T ss_pred             eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEcC-CCC
Confidence            3445678889889999987531       257888776421    12355788888777443  233444444332 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus        91 ~~li~e~~~~~~L  103 (293)
T cd05053          91 LYVVVEYAAHGNL  103 (293)
T ss_pred             eEEEEEeCCCCcH
Confidence            8999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=97.59  E-value=0.00074  Score=59.57  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=47.7

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e  127 (328)
                      +..++.|..+.+|++... + ..+++|.....     ....+..|++.++.+.+.   .+.+++...... ....+++||
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP---NIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC---ccceeeeeeecCCCCEEEEEeh
Confidence            355788888999998764 3 36888876421     123455677777777542   344444432221 346799999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        82 ~~~~~~L   88 (265)
T cd08217          82 YCEGGDL   88 (265)
T ss_pred             hccCCCH
Confidence            9999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.58  E-value=0.00084  Score=60.23  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=49.3

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|..+.+|+.... + ..+++|......     ...+..|+..++.+.+   -.+++++..... ....++||||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~   80 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH---PYVVKLLDVFPH-GSGFVLVMEY   80 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeeEEEecc
Confidence            345788899999998763 3 478889875321     3456778888887753   234555554332 4578999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      + |..
T Consensus        81 ~-~~~   84 (286)
T cd07832          81 M-PSD   84 (286)
T ss_pred             c-CCC
Confidence            9 765

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=97.57  E-value=0.00098  Score=59.39  Aligned_cols=73  Identities=14%  Similarity=0.118  Sum_probs=45.5

Q ss_pred             eeCCcccceeEEEEeCC----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.+|+....+    ..+++|......    ...+..|++.++.+.+   -.+.+++..... .+..+++|||+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~nii~~~~~~~~-~~~~~lv~e~~   77 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH---PNVLQCLGQCIE-SIPYLLVLEFC   77 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC---CCcceEEEEECC-CCceEEEEEeC
Confidence            46888899999875432    257788654321    1234567776666533   234455544332 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~g~L   82 (269)
T cd05042          78 PLGDL   82 (269)
T ss_pred             CCCcH
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.57  E-value=0.0012  Score=58.48  Aligned_cols=75  Identities=11%  Similarity=0.061  Sum_probs=50.3

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|..+.+|++... + ..+++|.....    ....+..|++.++.+.+   ..+++++..... +...+++||++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~~   81 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH---PNVVKYYTSFVV-GDELWLVMPYL   81 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC---CCEEEEEEEEee-CCEEEEEEecc
Confidence            456788888999999864 3 37888887532    23456778887777743   234555543322 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|..+
T Consensus        82 ~~~~l   86 (267)
T cd06610          82 SGGSL   86 (267)
T ss_pred             CCCcH
Confidence            99853

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=97.57  E-value=0.00078  Score=63.67  Aligned_cols=79  Identities=13%  Similarity=0.074  Sum_probs=53.3

Q ss_pred             eeeeeeeCCcccceeEEEEe---C---C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGT---D---A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~---~---~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-.+.+|.|..+.||++..   .   + ..+.+|......    ...+..|+++++.+.++  -.+++++..... .+.
T Consensus        40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~  116 (374)
T cd05106          40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--KNIVNLLGACTH-GGP  116 (374)
T ss_pred             ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--CceeeEeeEecC-CCC
Confidence            34456788899999998763   1   1 258888775321    23466788888888543  245666655433 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus       117 ~~lv~ey~~~g~L  129 (374)
T cd05106         117 VLVITEYCCYGDL  129 (374)
T ss_pred             eEEeHhhccCCcH
Confidence            8999999999865

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=97.57  E-value=0.00097  Score=59.23  Aligned_cols=73  Identities=14%  Similarity=0.037  Sum_probs=48.6

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCCCC------------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG------------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~------------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ..++.|..+.+|+....  +..+++|......            ...+..|+.+++.+.+   -.+++++..... .+..
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~   81 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---ENIVQYLGSSLD-ADHL   81 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEe-CCcc
Confidence            35677888899998753  2478888664311            1345677887887754   235556555433 4688


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++|||++|..
T Consensus        82 ~lv~e~~~~~~   92 (267)
T cd06628          82 NIFLEYVPGGS   92 (267)
T ss_pred             EEEEEecCCCC
Confidence            99999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=97.57  E-value=0.00099  Score=59.58  Aligned_cols=78  Identities=18%  Similarity=0.101  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ++.++.|..+.+|+.... + ..+++|.....    ....+..|..+++.+.....-.+.+++..... ....+++|||+
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~   84 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYA   84 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecC
Confidence            456788889999998753 3 47888976532    12346678888888864212234444443322 45789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|..+
T Consensus        85 ~~~~L   89 (277)
T cd06917          85 EGGSV   89 (277)
T ss_pred             CCCcH
Confidence            99753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=97.56  E-value=0.0015  Score=57.58  Aligned_cols=76  Identities=21%  Similarity=0.118  Sum_probs=46.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|....+|++....  ..+++|.....     ....+..|.+.++.+.+.   .+.+++......++..+++|||
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHP---NIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCC---CeeeeeeeecCCCCEEEEEecc
Confidence            4557788889999988643  37888876421     123455677777666432   2333333221113467899999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        82 ~~~~~l   87 (257)
T cd08223          82 CEGGDL   87 (257)
T ss_pred             cCCCcH
Confidence            998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=97.56  E-value=0.001  Score=58.95  Aligned_cols=75  Identities=21%  Similarity=0.152  Sum_probs=50.3

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .+.++.|..+.+|++...++ .+++|......   ...+..|...++.+.+   -.+.+++..... ....+++|||++|
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~   86 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH---KHLISLFAVCSV-GEPVYIITELMEK   86 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC---cchhheeeeEec-CCCeEEEEeeccc
Confidence            34567888899999876554 77788876422   3456777777777643   234455544433 4578999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        87 ~~L   89 (261)
T cd05148          87 GSL   89 (261)
T ss_pred             CCH
Confidence            754

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.55  E-value=0.00072  Score=63.30  Aligned_cols=75  Identities=15%  Similarity=0.113  Sum_probs=46.3

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~  122 (328)
                      -++.+|.|..+.||++... . ..+++|.....     ....+..|..+++.+.+.   .+.+++......     ....
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~  101 (359)
T cd07876          25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK---NIISLLNVFTPQKSLEEFQDV  101 (359)
T ss_pred             EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCC---CEeeeeeeeccCCCcccccee
Confidence            3577899999999999764 2 37888986421     123455677777776532   233333322110     1346


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      +++|||++|.
T Consensus       102 ~lv~e~~~~~  111 (359)
T cd07876         102 YLVMELMDAN  111 (359)
T ss_pred             EEEEeCCCcC
Confidence            9999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=97.55  E-value=0.00047  Score=62.78  Aligned_cols=148  Identities=20%  Similarity=0.202  Sum_probs=85.1

Q ss_pred             eeeeeeCCcccceeEEEEe-CCc-cEEEEecCC--C---CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRS--I---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~--~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      .+++.+|+|....||+... .+| -++||.-+-  .   .+....+|+.+|+.|.+...  +-.++.+-...     .+.
T Consensus        14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcc--eEEEEeeeeecccccccce
Confidence            3567789999999999875 344 667776542  1   23445689999999987532  33333322111     246


Q ss_pred             eEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC
Q 020294          122 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD  201 (328)
Q Consensus       122 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~  201 (328)
                      -++|+||++-.        +.+.+.   ..+.+  ..|.+                .   ..    +             
T Consensus        92 l~lvfe~~d~D--------L~~ymd---~~~~~--~~g~~----------------~---~~----i-------------  122 (323)
T KOG0594|consen   92 LYLVFEFLDRD--------LKKYMD---SLPKK--PQGLP----------------P---RL----I-------------  122 (323)
T ss_pred             EEEEEEeeccc--------HHHHHH---hcccc--ccCCC----------------H---HH----H-------------
Confidence            67899987763        111111   11110  01110                0   00    1             


Q ss_pred             hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchh
Q 020294          202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA  260 (328)
Q Consensus       202 ~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~~  260 (328)
                         +..+.+++..+. ++    ...+++|+||+|.|||++++|...|+||. + .++-|.-
T Consensus       123 ---k~~m~Qll~gl~-~~----H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~  175 (323)
T KOG0594|consen  123 ---KSFMRQLLRGLA-FL----HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR  175 (323)
T ss_pred             ---HHHHHHHHHHHH-HH----HhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc
Confidence               112223333332 11    24589999999999999999989999985 3 4554444

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.55  E-value=0.00099  Score=59.19  Aligned_cols=76  Identities=13%  Similarity=0.042  Sum_probs=51.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEE
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~  126 (328)
                      ++.++.|....+|++....  ..+++|.....  ....+..|..+++.+.++  -.+++++......     ....+++|
T Consensus        11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~lv~   88 (275)
T cd06608          11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPGNDDQLWLVM   88 (275)
T ss_pred             eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCCcceEEEEEE
Confidence            4667888888999988642  37888887642  234577888888888654  3455565543211     23579999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        89 e~~~~~~   95 (275)
T cd06608          89 ELCGGGS   95 (275)
T ss_pred             EcCCCCc
Confidence            9999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=97.55  E-value=0.0013  Score=58.54  Aligned_cols=77  Identities=25%  Similarity=0.121  Sum_probs=49.4

Q ss_pred             eeeeeeCCcccceeEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .-.+.++.|..+.+|+.....     ..+.+|......    ...+..|..+++.+.+   -.+.+++..... .+..++
T Consensus         7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~i   82 (266)
T cd05033           7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH---PNIIRLEGVVTK-SRPVMI   82 (266)
T ss_pred             eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCcceEeEEEec-CCceEE
Confidence            345678888899999986532     257788765321    2345567777776643   234445443322 457899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +||+++|+.+
T Consensus        83 v~e~~~~~~L   92 (266)
T cd05033          83 ITEYMENGSL   92 (266)
T ss_pred             EEEcCCCCCH
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=97.54  E-value=0.001  Score=59.35  Aligned_cols=73  Identities=18%  Similarity=0.171  Sum_probs=47.9

Q ss_pred             eeCCcccceeEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.+|+....++    .+++|..+...    ...+..|...++.+.+   -.+++++..... ....+++|||+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~   77 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH---SNLLQCLGQCTE-VTPYLLVMEFC   77 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCCcEEEEECC
Confidence            467888899999875432    57888765321    1245567877777754   235555554432 35679999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~g~L   82 (269)
T cd05087          78 PLGDL   82 (269)
T ss_pred             CCCcH
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=97.53  E-value=0.00096  Score=59.40  Aligned_cols=27  Identities=26%  Similarity=0.300  Sum_probs=24.3

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|+++.||++++++...++|+.
T Consensus       133 ~~i~H~dl~~~nil~~~~~~~~l~dfg  159 (269)
T cd08528         133 KRIVHRDLTPNNIMLGEDDKVTITDFG  159 (269)
T ss_pred             CceeecCCCHHHEEECCCCcEEEeccc
Confidence            469999999999999988888999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=97.52  E-value=0.0014  Score=58.78  Aligned_cols=76  Identities=16%  Similarity=0.068  Sum_probs=50.8

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.++.|..+.+|+....  +..+++|......    ...+..|++.++.+.+   -.+++++..... +...+++|||
T Consensus         8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   83 (277)
T cd06640           8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-GTKLWIIMEY   83 (277)
T ss_pred             hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEEec
Confidence            3556888888999998753  3478888865321    2345567777776643   245566655433 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        84 ~~~~~L   89 (277)
T cd06640          84 LGGGSA   89 (277)
T ss_pred             CCCCcH
Confidence            999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=97.52  E-value=0.0005  Score=60.67  Aligned_cols=72  Identities=11%  Similarity=0.050  Sum_probs=46.4

Q ss_pred             eCCcccceeEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.|..+.+|++...+  ..+++|......      ...+..|.+.++.+.+   ..+++++..... ....+++|||++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS---PYVVKLYYSFQG-KKNLYLVMEYLP   76 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC---cchhHHHHheec-CcEEEEEEecCC
Confidence            3567778999998753  389999875421      2345566666666643   234444443322 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 ~~~L   80 (265)
T cd05579          77 GGDL   80 (265)
T ss_pred             CCcH
Confidence            8753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=97.52  E-value=0.0011  Score=59.13  Aligned_cols=75  Identities=19%  Similarity=0.069  Sum_probs=48.4

Q ss_pred             eeeeCCcccceeEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           56 ICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+.++.|..+.+|+....  ++   .+.+|......    ...+..|..+++.+.+   -.+.+++..... ++..+++|
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   84 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SKPVMIVT   84 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEE
Confidence            456788888999997642  22   57888765321    2345667777777643   234555544332 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      |+++|+.+
T Consensus        85 e~~~~~~L   92 (267)
T cd05066          85 EYMENGSL   92 (267)
T ss_pred             EcCCCCCH
Confidence            99999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.52  E-value=0.0011  Score=60.05  Aligned_cols=73  Identities=11%  Similarity=-0.028  Sum_probs=46.5

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ++.++.|..+.+|+....  +..+++|......        ...+..|.+.++.+.+   -.+.+++..... ....++|
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv   80 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH---PNIIGLLDVFGH-KSNINLV   80 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC---CCChhhhheeec-CCEEEEE
Confidence            345788889999998753  3488999876421        1224457777776653   234444444332 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||+ ++.
T Consensus        81 ~e~~-~~~   87 (298)
T cd07841          81 FEFM-ETD   87 (298)
T ss_pred             Eccc-CCC
Confidence            9999 543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=97.52  E-value=0.0012  Score=58.71  Aligned_cols=71  Identities=14%  Similarity=0.074  Sum_probs=47.1

Q ss_pred             eCCcccceeEEEEeC--C-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD--A-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~--~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.|..+.+|+....  + + .+.+|+.....    ...+..|+.+++.+.+   -.+.+++....  ....+++|||++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ii~~~~~~~--~~~~~lv~e~~~   77 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN---PYIVRMIGVCE--AEALMLVMEMAS   77 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC---CCeEEEEEEEc--CCCeEEEEEeCC
Confidence            678888999986532  2 3 57888876432    2346778888888754   23444554432  356799999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+++
T Consensus        78 ~~~L   81 (257)
T cd05115          78 GGPL   81 (257)
T ss_pred             CCCH
Confidence            9764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=97.52  E-value=0.0019  Score=58.37  Aligned_cols=75  Identities=19%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~  124 (328)
                      .+.++.|..+.+|++... ++ .+++|.....     ....+..|...++.+.++  -.+++++......    ....++
T Consensus         6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~~~~l   83 (295)
T cd07837           6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES--IYIVRLLDVEHVEEKNGKPSLYL   83 (295)
T ss_pred             eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC--CCccceeeeEeecCCCCCceEEE
Confidence            456788888999998864 33 7889986531     123466788888888653  2355555443321    123699


Q ss_pred             EEeeecCC
Q 020294          125 IMEFIEFG  132 (328)
Q Consensus       125 v~e~l~G~  132 (328)
                      +|||++|.
T Consensus        84 v~e~~~~~   91 (295)
T cd07837          84 VFEYLDSD   91 (295)
T ss_pred             EeeccCcC
Confidence            99999873

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.52  E-value=0.0009  Score=63.61  Aligned_cols=72  Identities=8%  Similarity=-0.069  Sum_probs=48.3

Q ss_pred             eeeeeeCCcccceeEEEEeCC----ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           54 TKICPVGGGCINLASRYGTDA----GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .-++.++.|....||+....+    ..+++|.....  .....|+++++.|.+.   .+.+++..... .+..+++|++.
T Consensus        95 ~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~  168 (392)
T PHA03207         95 NILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHR---AIINLIHAYRW-KSTVCMVMPKY  168 (392)
T ss_pred             EEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCC---CccceeeeEee-CCEEEEEehhc
Confidence            345678999999999986432    26778876532  3356899999888642   34455544332 45789999987


Q ss_pred             cC
Q 020294          130 EF  131 (328)
Q Consensus       130 ~G  131 (328)
                      .+
T Consensus       169 ~~  170 (392)
T PHA03207        169 KC  170 (392)
T ss_pred             CC
Confidence            65

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=97.51  E-value=0.00079  Score=60.41  Aligned_cols=72  Identities=14%  Similarity=0.060  Sum_probs=45.3

Q ss_pred             eCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.|..+.+|++... ++ .+.+|.....      ....+..|.++++.+..   -.+++.+..... .+..+++|||++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS---RFIVSLAYAFET-KDDLCLVMTLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC---CCEeeeeeEEec-CCeEEEEEecCC
Confidence            466788899998754 33 7888877531      12334568888877753   123333333222 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 ~~~L   80 (277)
T cd05577          77 GGDL   80 (277)
T ss_pred             CCcH
Confidence            8753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=97.51  E-value=0.00029  Score=62.93  Aligned_cols=76  Identities=11%  Similarity=0.022  Sum_probs=50.6

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|..+.+|++... + ..+++|+....      ....+..|.++++.+.++  -.+++++..... .+..+++||
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e   82 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--PGIIKLYYTFQD-EENLYFVLE   82 (280)
T ss_pred             eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--CCchhHHHHhcC-CceEEEEEc
Confidence            346788888999998864 3 37888987531      123456677777777532  235555544332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      +++|+.+
T Consensus        83 ~~~~~~L   89 (280)
T cd05581          83 YAPNGEL   89 (280)
T ss_pred             CCCCCcH
Confidence            9988754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.51  E-value=0.0012  Score=59.22  Aligned_cols=75  Identities=13%  Similarity=0.102  Sum_probs=51.2

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.++.|....+|++...+  ..+++|.....     ....+..|.+.++.+.+   -.+++++..... ++..+++||
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   80 (286)
T cd07846           5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH---ENLVNLIEVFRR-KKRLYLVFE   80 (286)
T ss_pred             EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC---cchhhHHHhccc-CCeEEEEEe
Confidence            35678889999999988753  37888876421     12345678888777754   245555555433 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        81 ~~~~~~   86 (286)
T cd07846          81 FVDHTV   86 (286)
T ss_pred             cCCccH
Confidence            999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=97.51  E-value=0.0018  Score=57.60  Aligned_cols=77  Identities=19%  Similarity=0.069  Sum_probs=50.2

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-++.++.|..+.+|+.... ++ .+++|+....   ....+..|+..++.+.+.   .+++++..... .+..+++|||
T Consensus        12 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~---~ii~~~~~~~~-~~~~~iv~e~   87 (267)
T cd06646          12 ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHC---NIVAYFGSYLS-REKLWICMEY   87 (267)
T ss_pred             chhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCC---CeeeeeEEEEe-CCEEEEEEeC
Confidence            33566788888999998753 33 6788887532   223466777777766432   34444444332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        88 ~~~~~L   93 (267)
T cd06646          88 CGGGSL   93 (267)
T ss_pred             CCCCcH
Confidence            998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.51  E-value=0.0012  Score=64.13  Aligned_cols=131  Identities=19%  Similarity=0.137  Sum_probs=88.1

Q ss_pred             eeCCcccceeEEEEe-CCc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGT-DAG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~-~~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      -+|.|....+|+++. +.| .|.+|+-+.      ...+.+..|+++++.|.+.   .|-+.+.+-++ ....|+++|.+
T Consensus        25 ~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp---nIV~f~~~FED-s~nVYivLELC  100 (592)
T KOG0575|consen   25 FLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP---NIVQFYHFFED-SNNVYIVLELC  100 (592)
T ss_pred             eeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC---cEEeeeeEeec-CCceEEEEEec
Confidence            468899999999987 655 788888753      2467788999999988753   35555554333 46889999999


Q ss_pred             cCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHH
Q 020294          130 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH  209 (328)
Q Consensus       130 ~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  209 (328)
                      +-+.           |.++|+.-.+   +  .               +.-        ..                -.+.
T Consensus       101 ~~~s-----------L~el~Krrk~---l--t---------------EpE--------ar----------------y~l~  125 (592)
T KOG0575|consen  101 HRGS-----------LMELLKRRKP---L--T---------------EPE--------AR----------------YFLR  125 (592)
T ss_pred             CCcc-----------HHHHHHhcCC---C--C---------------cHH--------HH----------------HHHH
Confidence            8875           6777773321   0  0               000        01                1122


Q ss_pred             HHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          210 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       210 ~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      +++..+.. +-    ...++|+||+.||++++++-.+.|=||.
T Consensus       126 QIv~GlkY-LH----~~~IiHRDLKLGNlfL~~~~~VKIgDFG  163 (592)
T KOG0575|consen  126 QIVEGLKY-LH----SLGIIHRDLKLGNLFLNENMNVKIGDFG  163 (592)
T ss_pred             HHHHHHHH-HH----hcCceecccchhheeecCcCcEEecccc
Confidence            33333332 22    3469999999999999888678898874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=97.51  E-value=0.00077  Score=63.75  Aligned_cols=185  Identities=16%  Similarity=0.116  Sum_probs=107.8

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceec---cccC---CCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALP---TGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~---~~~~---~~~~~~v~e~l  129 (328)
                      ++-++.|-...||+-+..+..+.||+++......+..|.++++..    +..-|.++.+   +...   .-..++|++|-
T Consensus       215 ~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh  290 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRMEYWLVTEFH  290 (534)
T ss_pred             HHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc----CccchhHHHhhchhccCCccccceeEEeeec
Confidence            344578899999999999889999999876666777787766544    3344444433   1111   12568888886


Q ss_pred             cCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHH
Q 020294          130 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH  209 (328)
Q Consensus       130 ~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  209 (328)
                      +-+.+       -+.|.. |               .           -+|.+.   -++..-+.            +-+.
T Consensus       291 ~kGsL-------~dyL~~-n---------------t-----------isw~~~---cria~Sma------------rGLa  321 (534)
T KOG3653|consen  291 PKGSL-------CDYLKA-N---------------T-----------ISWNSL---CRIAESMA------------RGLA  321 (534)
T ss_pred             cCCcH-------HHHHHh-c---------------c-----------ccHHHH---HHHHHHHH------------HHHH
Confidence            66542       111110 0               0           134321   12221110            0111


Q ss_pred             HHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c---ccCCchhhhhh-h-hhcCCChhhHHHHhhhCC
Q 020294          210 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGM-S-WCAGFGGSFYNSYFEVMP  283 (328)
Q Consensus       210 ~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~---~~G~p~~DLa~-~-~~~~~~~~f~~~Y~~~~p  283 (328)
                      .+-+-++  ..+ ..+|++.|+||++.|||+.+|....|-||. +   ..|-+.-|..- . ....+.++.+|+--....
T Consensus       322 ~LHee~p--~~d-~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d  398 (534)
T KOG3653|consen  322 HLHEELP--RGD-HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD  398 (534)
T ss_pred             HhcccCC--cCC-CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc
Confidence            1222122  222 468899999999999999888877899974 3   24555555542 1 112244677776554432


Q ss_pred             CCCCHHHHHHHHHHH
Q 020294          284 KQPGFEKRRDLYMLY  298 (328)
Q Consensus       284 l~~~~~~r~~ly~l~  298 (328)
                        +.--.|+++|.+.
T Consensus       399 --~~Afkr~DvYamg  411 (534)
T KOG3653|consen  399 --RDAFKRIDVYAMG  411 (534)
T ss_pred             --HHHHHHHHHHHHH
Confidence              4456889999754

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=97.51  E-value=0.0022  Score=57.63  Aligned_cols=75  Identities=13%  Similarity=0.083  Sum_probs=49.8

Q ss_pred             eeeeCCcccceeEEEEe---C--C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGT---D--A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~---~--~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+.++.|..+.+|+...   +  + ..+.+|......    ...+..|++.++.+.+   -.+++++..... ....+++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv   85 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH---PNIVCLLGVVTQ-EQPVCML   85 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEec-CCceEEE
Confidence            46688888899999763   1  2 267778775321    2346678888888754   235555554332 3578999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++++++
T Consensus        86 ~e~~~~~~L   94 (283)
T cd05090          86 FEYLNQGDL   94 (283)
T ss_pred             EEcCCCCcH
Confidence            999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.51  E-value=0.0013  Score=61.81  Aligned_cols=75  Identities=13%  Similarity=0.129  Sum_probs=45.8

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----C-CCce
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~-~~~~  122 (328)
                      -++.+|.|..+.||++...  +..+++|.....     ....+..|...++.+.+.   .+.+++.....    . ....
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~ii~~~~~~~~~~~~~~~~~~  104 (364)
T cd07875          28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIIGLLNVFTPQKSLEEFQDV  104 (364)
T ss_pred             EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCC---CccccceeecccccccccCeE
Confidence            3567889999999998754  337888876531     123455677777777542   22223322111    0 2357


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      ++||||+++.
T Consensus       105 ~lv~e~~~~~  114 (364)
T cd07875         105 YIVMELMDAN  114 (364)
T ss_pred             EEEEeCCCCC
Confidence            9999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=97.51  E-value=0.00087  Score=59.44  Aligned_cols=72  Identities=14%  Similarity=0.050  Sum_probs=47.3

Q ss_pred             eCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|..+.+|++...  +..+++|.....      ....+..|...++.+.+   -.+++++..... +...++++||.+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIVKLYRTFKD-KKYIYMLMEYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC---CCEeeeeeeEEc-CCccEEEEecCC
Confidence            456777899998875  448889987531      12446678877777743   234444443322 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        77 ~~~L   80 (262)
T cd05572          77 GGEL   80 (262)
T ss_pred             CCcH
Confidence            8753

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.50  E-value=0.001  Score=60.00  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=50.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..++.++.|..+.+|+.... + ..|++|.....    ....+..|.++++.+.+.   .+.+++.+... ....++|||
T Consensus         8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e   83 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA---NIVTLHDIIHT-KKTLTLVFE   83 (291)
T ss_pred             eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc---ceeeEEEEEec-CCeEEEEEe
Confidence            44577888999999998764 3 37899986532    123355788888888542   35555554432 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |++|
T Consensus        84 ~~~~   87 (291)
T cd07844          84 YLDT   87 (291)
T ss_pred             cCCC
Confidence            9976

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=97.50  E-value=0.0016  Score=58.96  Aligned_cols=74  Identities=19%  Similarity=0.124  Sum_probs=50.5

Q ss_pred             eeeCCcccceeEEEEeCC-------------c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294           57 CPVGGGCINLASRYGTDA-------------G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGA  116 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-------------~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~  116 (328)
                      +.++.|....+|++...+             +   .+++|..+...    ...+..|.+.++.+.+   -.+++++....
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~   87 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN---PNIIRLLGVCV   87 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEc
Confidence            558888889999876432             1   37888876421    2346678888887754   34566665543


Q ss_pred             cCCCceEEEEeeecCCCC
Q 020294          117 LPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       117 ~~~~~~~~v~e~l~G~~~  134 (328)
                      . .+..+++|||++|..+
T Consensus        88 ~-~~~~~lv~e~~~~~~L  104 (295)
T cd05097          88 S-DDPLCMITEYMENGDL  104 (295)
T ss_pred             C-CCccEEEEecCCCCcH
Confidence            3 4678999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.50  E-value=0.0018  Score=58.42  Aligned_cols=75  Identities=12%  Similarity=0.027  Sum_probs=50.3

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .-++.++.|..+.+|+....  ++.+++|.....   . ...+..|++.++.+.+   ..+++++..... .+..+++||
T Consensus         8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~e   83 (291)
T cd07870           8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---ANIVLLHDIIHT-KETLTFVFE   83 (291)
T ss_pred             EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC---CCEeEEEEEEec-CCeEEEEEe
Confidence            34667888899999998653  448999987532   1 2245678888887753   235555554433 457899999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      |+++.
T Consensus        84 ~~~~~   88 (291)
T cd07870          84 YMHTD   88 (291)
T ss_pred             cccCC
Confidence            99753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=97.49  E-value=0.0021  Score=57.33  Aligned_cols=78  Identities=17%  Similarity=0.205  Sum_probs=52.9

Q ss_pred             eeeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...++.+|.|..+.+|+....       ...+++|......    ...+..|.++++.+.+.   .+++++..... .+.
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~   82 (275)
T cd05046           7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHK---NVVRLLGLCRE-AEP   82 (275)
T ss_pred             ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCc---ceeeeEEEECC-CCc
Confidence            345667888999999998752       2357888775422    23567888888888542   34556654432 457


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus        83 ~~lv~e~~~~~~L   95 (275)
T cd05046          83 HYMILEYTDLGDL   95 (275)
T ss_pred             ceEEEEecCCCcH
Confidence            8999999998753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=97.49  E-value=0.0008  Score=59.47  Aligned_cols=75  Identities=15%  Similarity=0.129  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|....+|+++..+  ..+++|......    ...+..|...+..+.+   -.+++++..... .+..+++|||+
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES---PYVVKCYGAFYK-EGEISIVLEYM   81 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEcc-CCeEEEEEEec
Confidence            4667778888999987753  478889876432    3456677777777753   235555544332 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|..+
T Consensus        82 ~~~~L   86 (264)
T cd06623          82 DGGSL   86 (264)
T ss_pred             CCCcH
Confidence            98753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=97.49  E-value=0.00079  Score=59.66  Aligned_cols=75  Identities=20%  Similarity=0.047  Sum_probs=47.7

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ++.++.|....+|++...  +..+++|......    ...+..|++.++.+.+   -.+++++..... .+..++++|++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS---PYIVGFYGAFYN-NGDISICMEYM   81 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC---Cchhhhheeeec-CCEEEEEEEec
Confidence            445778888899999875  3368888765321    2335567766666642   234444443322 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|..+
T Consensus        82 ~~~~L   86 (265)
T cd06605          82 DGGSL   86 (265)
T ss_pred             CCCcH
Confidence            98753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=97.49  E-value=0.0013  Score=62.86  Aligned_cols=79  Identities=14%  Similarity=0.096  Sum_probs=53.9

Q ss_pred             eeeeeeeCCcccceeEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-.+.+|.|..+.||+.+..   .    ..+.+|......    ...+..|+++++.+..+  -.+++++..... .+.
T Consensus        39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~~  115 (400)
T cd05105          39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--LNIVNLLGACTK-SGP  115 (400)
T ss_pred             eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--CCeeeEEEEEcc-CCc
Confidence            344567888999999987631   1    147888775321    24566788888888543  246666665543 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus       116 ~~lv~Ey~~~g~L  128 (400)
T cd05105         116 IYIITEYCFYGDL  128 (400)
T ss_pred             eEEEEEecCCCcH
Confidence            8999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.48  E-value=0.0011  Score=58.31  Aligned_cols=75  Identities=13%  Similarity=0.010  Sum_probs=51.1

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.++.|....+|++...+  ..+++|..+.. ....+..|.+.++.+.+   ..+++++..... ....++++|+++|.
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~   83 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS---PYIVKYYGSYFK-NTDLWIVMEYCGAG   83 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC---CcEeeeeeeeec-CCcEEEEEecCCCC
Confidence            3457778888999987653  47888987642 24567788888888733   234455544332 46789999999987


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus        84 ~L   85 (256)
T cd06612          84 SV   85 (256)
T ss_pred             cH
Confidence            53

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=97.48  E-value=0.0017  Score=57.01  Aligned_cols=74  Identities=16%  Similarity=0.044  Sum_probs=50.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|....+|+.....  ..+++|......     ...+..|++.+..+.+.   .+++++..... .+..+++|++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~   80 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP---NIVKYIGSIET-SDSLYIILEY   80 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCC---CccEEEEEEEe-CCEEEEEEec
Confidence            4678888999999987642  378899876432     23466777777777532   34445544332 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|..
T Consensus        81 ~~~~~   85 (254)
T cd06627          81 AENGS   85 (254)
T ss_pred             CCCCc
Confidence            99874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=97.48  E-value=0.0015  Score=57.27  Aligned_cols=71  Identities=11%  Similarity=0.030  Sum_probs=46.8

Q ss_pred             eCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|....+|++...  +..+++|.....      ....+..|...++.+.+   ..+++++..... ++..+++|||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH---PFIVKLHYAFQT-EEKLYLVLEYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC---CcHHHHHHHeec-CCeeEEEEecCC
Confidence            466778899998764  347888987532      12356677777777753   234445443322 467899999998


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |..
T Consensus        77 ~~~   79 (250)
T cd05123          77 GGE   79 (250)
T ss_pred             CCc
Confidence            875

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=97.48  E-value=0.0018  Score=57.64  Aligned_cols=76  Identities=24%  Similarity=0.124  Sum_probs=49.5

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.+.++.|..+.+|+.... ++    .+.+|..... .   ...+..|...++.+.+   -.+.+++..... ++..+++
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv   83 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SRPVMII   83 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---cCcceEEEEECC-CCceEEE
Confidence            3556788899999998753 22    4889987542 1   2346677777776643   234555544332 4577999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        84 ~e~~~~~~L   92 (269)
T cd05065          84 TEFMENGAL   92 (269)
T ss_pred             EecCCCCcH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=97.48  E-value=0.0012  Score=59.96  Aligned_cols=76  Identities=17%  Similarity=0.091  Sum_probs=50.9

Q ss_pred             eeeeeCCcccceeEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccce
Q 020294           55 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF  112 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~  112 (328)
                      -.+.++.|..+.+|++...+                 + .+.+|......    ...+..|++.++.+.+   ..+++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~   85 (296)
T cd05095           9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD---PNIIRLL   85 (296)
T ss_pred             eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEE
Confidence            35668899999999874321                 1 46778775321    2456778888888754   3455666


Q ss_pred             eccccCCCceEEEEeeecCCCC
Q 020294          113 KVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       113 ~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      ..... .+..+++|||++|+.+
T Consensus        86 ~~~~~-~~~~~lv~e~~~~~~L  106 (296)
T cd05095          86 AVCIT-SDPLCMITEYMENGDL  106 (296)
T ss_pred             EEEec-CCccEEEEEeCCCCcH
Confidence            55433 4578999999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.47  E-value=0.0015  Score=58.34  Aligned_cols=72  Identities=17%  Similarity=0.202  Sum_probs=47.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|++... ++ .+++|......     ...+..|.+.++.+.+   -.+.+++..... ....++++||
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~   79 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH---PNIIKLLDVFRH-KGDLYLVFEF   79 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC---CCcchHHHhhcc-CCCEEEEEec
Confidence            456788888999998764 33 78888765321     2345678888877753   234444443322 3578999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      .++
T Consensus        80 ~~~   82 (283)
T cd05118          80 MDT   82 (283)
T ss_pred             cCC
Confidence            876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=97.47  E-value=0.0011  Score=59.26  Aligned_cols=74  Identities=15%  Similarity=0.020  Sum_probs=48.4

Q ss_pred             eeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           57 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ..++.|..+.+|+....+  ..+++|......    ...+..|.++++.+.+.   .+.+++..... +...++++|+++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~~v~e~~~   82 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSP---YITKYYGSFLK-GSKLWIIMEYCG   82 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCC---CeeeeeEEEEE-CCeEEEEEEeeC
Confidence            446778889999987642  378889875321    23466788888877632   23334433222 357899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        83 ~~~L   86 (274)
T cd06609          83 GGSC   86 (274)
T ss_pred             CCcH
Confidence            9754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.47  E-value=0.002  Score=58.85  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=47.2

Q ss_pred             eeeCCcccceeEEEEeCC----ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceecccc-CCCceEEEEeeec
Q 020294           57 CPVGGGCINLASRYGTDA----GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYIIMEFIE  130 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~~~~~~~v~e~l~  130 (328)
                      ..+|.|..+.||++...+    ..+++|..... ....+..|+++++.+.+.   .+.+++..... .+...+++|||.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHP---NVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCC---CeeeEEEEEeccCCCeEEEEEeeeC
Confidence            358889999999998543    26888876542 233466788888887642   23333332211 1356799999988


Q ss_pred             CC
Q 020294          131 FG  132 (328)
Q Consensus       131 G~  132 (328)
                      +.
T Consensus        84 ~~   85 (317)
T cd07867          84 HD   85 (317)
T ss_pred             Cc
Confidence            63

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=97.46  E-value=0.00049  Score=63.55  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=45.1

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~  124 (328)
                      .+.++.|..+.||++... + ..+++|.....     ....+..|+++++.+.+.   .+.+++......    ....++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC---CEeeecceEeccCCCCCceEEE
Confidence            456788899999998754 3 37888975421     123466788888877542   222333221110    134799


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +|||+++
T Consensus        82 v~e~~~~   88 (338)
T cd07859          82 VFELMES   88 (338)
T ss_pred             EEecCCC
Confidence            9999865

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=97.46  E-value=0.002  Score=56.97  Aligned_cols=75  Identities=19%  Similarity=0.105  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|..+.+|+....  +..+++|.....     ....+..|...++.+.+   -.+.+++..... .+..++++||
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~lv~e~   80 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVH-REKVYIFMEY   80 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC---CChhheeeeEec-CCEEEEEEec
Confidence            356888999999998764  347888886532     12346678887777754   234555544332 4578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        81 ~~~~~L   86 (264)
T cd06626          81 CSGGTL   86 (264)
T ss_pred             CCCCcH
Confidence            998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.46  E-value=0.00074  Score=60.71  Aligned_cols=76  Identities=14%  Similarity=-0.124  Sum_probs=49.3

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.++.|..+.+|++... + ..+++|..... .   ...+..|.++++.+.+   -.+.+++..... ++..+++|||
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   80 (279)
T cd06619           5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS---PYIIGFYGAFFV-ENRISICTEF   80 (279)
T ss_pred             heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence            3567888888999998753 3 47888886532 1   2335567777766643   234445544332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        81 ~~~~~l   86 (279)
T cd06619          81 MDGGSL   86 (279)
T ss_pred             CCCCCh
Confidence            999754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=97.46  E-value=0.0016  Score=57.09  Aligned_cols=75  Identities=17%  Similarity=0.080  Sum_probs=49.6

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e  127 (328)
                      .+.++.|....+|+....  +..+++|......     ...+..|++.++.+.+   -.+.+++...... ....++++|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH---PNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC---CCEeeEEEEEecCCCCeEEEEEE
Confidence            456778888899998875  3378888875432     3456778887777753   2344444443321 157899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      +++|..
T Consensus        82 ~~~~~~   87 (260)
T cd06606          82 YVSGGS   87 (260)
T ss_pred             ecCCCc
Confidence            998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=97.46  E-value=0.002  Score=58.76  Aligned_cols=79  Identities=13%  Similarity=0.084  Sum_probs=52.1

Q ss_pred             eeeeeeeCCcccceeEEEEeC------C-ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~------~-~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-.+.++.|..+.+|+.+..      . ..+.+|..... .   ...+..|.++++.+.++  -.+.+++..... .+.
T Consensus        37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~  113 (302)
T cd05055          37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--ENIVNLLGACTI-GGP  113 (302)
T ss_pred             eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--CCcceEEEEEec-CCc
Confidence            334556788888999988631      1 25778876532 1   23467788888888543  245555554432 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus       114 ~~lv~e~~~~~~L  126 (302)
T cd05055         114 ILVITEYCCYGDL  126 (302)
T ss_pred             eEEEEEcCCCCcH
Confidence            8999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=97.46  E-value=0.00063  Score=60.28  Aligned_cols=75  Identities=13%  Similarity=0.123  Sum_probs=44.8

Q ss_pred             eeeCCcccceeEEEEeC-C-ccEEEEecCCCC---cc---hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           57 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG---PS---MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~---~~---~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++++.|..+.+|+.... + ..+++|..+...   ..   .+..|...+....+  ...+++++..... .+..++++||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~-~~~~~lv~e~   78 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQS-KDYLYLVMEY   78 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEc-CCeEEEEEec
Confidence            46788888999998763 3 478889875321   11   12233333322222  2345555544432 4578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        79 ~~~~~L   84 (260)
T cd05611          79 LNGGDC   84 (260)
T ss_pred             cCCCCH
Confidence            999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=97.46  E-value=0.0027  Score=56.89  Aligned_cols=78  Identities=14%  Similarity=0.145  Sum_probs=49.6

Q ss_pred             ceeeeeeeCCcccceeEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-++.++.|..+.+|+.+. .++     .+.+|......    ...+..|...++.+.+   -.+++++....  ...
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~   82 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS---PYVCRLLGICL--TST   82 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC---CCCceEEEEEc--CCC
Confidence            455677889999999999874 333     36788875322    2234556666555532   23555555443  345


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++++++++++.+
T Consensus        83 ~~l~~~~~~~g~l   95 (279)
T cd05109          83 VQLVTQLMPYGCL   95 (279)
T ss_pred             cEEEEEcCCCCCH
Confidence            7899999998753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=97.46  E-value=0.0024  Score=57.64  Aligned_cols=79  Identities=13%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .......++.|..+.+|+.... + ..+++|.....   ....+..|...++.+.+   -.+.+++..... .+..++++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h---~~vv~~~~~~~~-~~~~~~v~   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH---PNIVEMYSSYLV-GDELWVVM   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC---CChheEEEEEEc-CCeEEEEE
Confidence            4556778999999999998753 3 37888876421   12335567777776643   234445543322 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      |+++|..+
T Consensus        96 e~~~~~~L  103 (285)
T cd06648          96 EFLEGGAL  103 (285)
T ss_pred             eccCCCCH
Confidence            99998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.46  E-value=0.0025  Score=57.14  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=51.3

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.++.|..+.+|+.... ++ .+++|.....    ....+..|+..++.+.+   -.+++++..... .+..+++|||
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   79 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---ENIVRLHDVIHT-ENKLMLVFEY   79 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC---CCEeeeeeeEee-CCcEEEEEec
Confidence            4667888889999998864 34 6888876532    23445678888888853   346666665443 4678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        80 ~~~   82 (284)
T cd07836          80 MDK   82 (284)
T ss_pred             CCc
Confidence            986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=97.46  E-value=0.00085  Score=60.22  Aligned_cols=77  Identities=14%  Similarity=0.136  Sum_probs=49.8

Q ss_pred             eeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           54 TKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .-++.++.|....||+.....       ..+.+|......    ...+..|...+..+.+   -.+.+++..... .+..
T Consensus         8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~   83 (283)
T cd05048           8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH---PNIVCLLGVCTK-EQPT   83 (283)
T ss_pred             chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC---cccceEEEEEcC-CCce
Confidence            346678888889999987532       257888765321    2346678877777643   234445544332 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||.+|+.+
T Consensus        84 ~~~~e~~~~~~L   95 (283)
T cd05048          84 CMLFEYLAHGDL   95 (283)
T ss_pred             EEEEecCCCCcH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=97.46  E-value=0.0013  Score=58.69  Aligned_cols=74  Identities=16%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             eeCCcccceeEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .++.|..+.+|++...+ +   .+.+|.....    ....+..|.+.++.+..+.  .+.+++..... .+..+++|||+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~-~~~~~lv~e~~   78 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP--NIINLLGACEH-RGYLYLAIEYA   78 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCC--CeeeEEEEEec-CCCceEEEEeC
Confidence            36778889999987643 3   3456665421    1235667888888886542  34455554433 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+++
T Consensus        79 ~~~~L   83 (270)
T cd05047          79 PHGNL   83 (270)
T ss_pred             CCCcH
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=97.45  E-value=0.0017  Score=59.21  Aligned_cols=90  Identities=11%  Similarity=-0.011  Sum_probs=52.5

Q ss_pred             HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCccc
Q 020294           39 PIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPR  110 (328)
Q Consensus        39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~  110 (328)
                      ++.+.+....+...-...+.++.|..+.+|++...  +..+++|.....   .   ...+..|.+.++.+.+.   .+.+
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~   79 (307)
T cd06607           3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP---NTIE   79 (307)
T ss_pred             hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC---CEEE
Confidence            34444443322212234566888999999998764  337888876421   1   12355677777776432   2333


Q ss_pred             ceeccccCCCceEEEEeeecCC
Q 020294          111 PFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus       111 ~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++..... .+..+++|||++|.
T Consensus        80 ~~~~~~~-~~~~~lv~e~~~g~  100 (307)
T cd06607          80 YKGCYLR-EHTAWLVMEYCLGS  100 (307)
T ss_pred             EEEEEEe-CCeEEEEHHhhCCC
Confidence            3333222 45789999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=97.45  E-value=0.0053  Score=55.82  Aligned_cols=77  Identities=13%  Similarity=0.113  Sum_probs=51.2

Q ss_pred             eeeeeeeCCcccceeEEEEe-C-CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           53 ITKICPVGGGCINLASRYGT-D-AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-~-~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.-++.++.|..+.+|+... . +..+++|.....   ....+..|...++.+.+.   .+++++..... ....++++|
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e   96 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP---NIVNFLDSFLV-GDELFVVME   96 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC---ceeeeeeeEec-CceEEEEEE
Confidence            45567788899999999764 2 347888876532   234566788887777542   24444443222 457899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        97 ~~~~~~  102 (296)
T cd06655          97 YLAGGS  102 (296)
T ss_pred             ecCCCc
Confidence            999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.45  E-value=0.0012  Score=62.70  Aligned_cols=75  Identities=16%  Similarity=0.152  Sum_probs=50.6

Q ss_pred             eeeeCCcccceeEEEEe--CCccEEEEecCCC-----------------CcchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294           56 ICPVGGGCINLASRYGT--DAGSFFVKTNRSI-----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGA  116 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-----------------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~  116 (328)
                      ...+|.|+...|=....  ++.-|.+|+-+..                 ..+.+.+|+++|+.|.+   ..|-+++.+-.
T Consensus       102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H---~nVV~LiEvLD  178 (576)
T KOG0585|consen  102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH---PNVVKLIEVLD  178 (576)
T ss_pred             hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC---cCeeEEEEeec
Confidence            34577787776544432  2336778876431                 11467899999999976   46777776654


Q ss_pred             cC-CCceEEEEeeecCCC
Q 020294          117 LP-TGGSYIIMEFIEFGS  133 (328)
Q Consensus       117 ~~-~~~~~~v~e~l~G~~  133 (328)
                      ++ ....|+|+||+..+.
T Consensus       179 DP~s~~~YlVley~s~G~  196 (576)
T KOG0585|consen  179 DPESDKLYLVLEYCSKGE  196 (576)
T ss_pred             CcccCceEEEEEeccCCc
Confidence            43 468899999999775

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=97.44  E-value=0.0019  Score=58.41  Aligned_cols=75  Identities=12%  Similarity=0.003  Sum_probs=48.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.+|.|..+.+|++....  ..+++|.....   .   ...+..|..+++.+.+.   .+...+..... .+..+++||
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e   80 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT   80 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC---CeeeeeEEEec-CCEEEEEEE
Confidence            4568889999999987642  37888876431   1   12345688888777542   23333333222 357899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        81 ~~~g~~L   87 (285)
T cd05630          81 LMNGGDL   87 (285)
T ss_pred             ecCCCcH
Confidence            9999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.44  E-value=0.0022  Score=54.99  Aligned_cols=74  Identities=18%  Similarity=0.084  Sum_probs=52.3

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|....+|++...+  ..+++|.....    ....+..|.+.++.+..   ..+++++..... ....++++|++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~   79 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH---PNIVKLYGVFED-PEPLYLVMEYC   79 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CChhhheeeeec-CCceEEEEecc
Confidence            3567788889999998865  48999998753    23456778877777733   345555554432 46789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|.+
T Consensus        80 ~~~~   83 (225)
T smart00221       80 EGGD   83 (225)
T ss_pred             CCCC
Confidence            9874

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=97.44  E-value=0.0032  Score=56.93  Aligned_cols=75  Identities=15%  Similarity=0.082  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ...++.|..+.+|++...      ++ .+.+|......   ...+..|++.++.+.+   -.+.+++..... .+..+++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   85 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH---EHIVKFYGVCGD-GDPLIMV   85 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC---CCcceEEEEEcc-CCceEEE
Confidence            456788888999998642      12 36667765432   2346678777777643   235555555433 4578999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        86 ~e~~~~~~L   94 (291)
T cd05094          86 FEYMKHGDL   94 (291)
T ss_pred             EecCCCCcH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=97.43  E-value=0.0024  Score=57.59  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             eeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           54 TKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .-+..++.|..+.+|++...       .+.+.+|......    ...+..|+..++.+.+   -.+.+++..... +...
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~iv~~~~~~~~-~~~~   83 (288)
T cd05050           8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH---PNIVKLLGVCAV-GKPM   83 (288)
T ss_pred             eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCcc
Confidence            33556788889999998752       2477888875422    2346678887777743   234555554432 3567


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        84 ~lv~e~~~~~~L   95 (288)
T cd05050          84 CLLFEYMAYGDL   95 (288)
T ss_pred             EEEEecCCCCCH
Confidence            999999999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=97.43  E-value=0.0019  Score=56.90  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=49.3

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|.+....  ..+++|.....     ....+..|...++.+.+   -.+++++..... .+..++++|+
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~   80 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH---PNIVQYQESFEE-NGNLYIVMDY   80 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC---CCeeeeEeeecC-CCeEEEEEec
Confidence            5678888889999987643  37888875421     12345667777777653   224445444322 4688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        81 ~~~~~l   86 (256)
T cd08218          81 CEGGDL   86 (256)
T ss_pred             CCCCcH
Confidence            998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=97.43  E-value=0.0012  Score=59.17  Aligned_cols=73  Identities=16%  Similarity=0.051  Sum_probs=47.2

Q ss_pred             eeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +.++.|..+.+|+.... ++ .+++|......    ...+..|++.++.+.+   -.+++++..... ....++||||++
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   85 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYITRYYGSYLK-GTKLWIIMEYLG   85 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC---CccHhhhccccc-CCceEEEEEccC
Confidence            44677888899998653 33 78888875321    2346677777776643   234445544332 457899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus        86 ~~~   88 (277)
T cd06642          86 GGS   88 (277)
T ss_pred             CCc
Confidence            875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=97.42  E-value=0.0028  Score=57.72  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=50.9

Q ss_pred             eeeeeCCcccceeEEEEeC--------C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           55 KICPVGGGCINLASRYGTD--------A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--------~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      -.++++.|..+.+|+....        + ..+++|.....    ....+..|...++.+.++  -.+.+++..... .+.
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~   95 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGP   95 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--CCchheeEEEec-CCc
Confidence            3467888999999988631        1 15778876532    123467788888888544  234555554332 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++++.+
T Consensus        96 ~~lv~e~~~~~~L  108 (304)
T cd05101          96 LYVIVEYASKGNL  108 (304)
T ss_pred             eEEEEecCCCCcH
Confidence            8999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=97.42  E-value=0.0032  Score=57.45  Aligned_cols=78  Identities=18%  Similarity=0.134  Sum_probs=51.6

Q ss_pred             eeeeeeCCcccceeEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           54 TKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .-.+.+|.|..+.||++...+         ..+++|......    ...+..|.+.++.+.++  -.+.+++..... .+
T Consensus        21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~-~~   97 (307)
T cd05098          21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DG   97 (307)
T ss_pred             EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEec-CC
Confidence            335678889999999986421         258888876421    22355688888877544  245555554433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus        98 ~~~lv~e~~~~~~L  111 (307)
T cd05098          98 PLYVIVEYASKGNL  111 (307)
T ss_pred             ceEEEEecCCCCcH
Confidence            78999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=97.42  E-value=0.0012  Score=58.34  Aligned_cols=75  Identities=11%  Similarity=0.030  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|..+.+|++...  +..+++|.....      ....+..|.+.++.+.+.   .++.++..... ....++++|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e   80 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP---FLVNLWYSFQD-EENMYLVVD   80 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCC---ChHHHHHhhcC-CCeEEEEEe
Confidence            566888889999999875  347888987531      124466777777777432   24444433322 457899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        81 ~~~~~~L   87 (258)
T cd05578          81 LLLGGDL   87 (258)
T ss_pred             CCCCCCH
Confidence            9999754

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=97.42  E-value=0.0018  Score=57.03  Aligned_cols=75  Identities=16%  Similarity=0.056  Sum_probs=49.4

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.++.|..+.+|.+....  ..+++|.....     ....+..|.++++.+.+.   .+.+++..... .+..+++||
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~~~~e   79 (256)
T cd08221           4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP---NIIAYYNHFMD-DNTLLIEME   79 (256)
T ss_pred             EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCC---CeeEEEeEEec-CCeEEEEEE
Confidence            35677888888888877533  37888875421     123466788888877432   34445544332 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        80 ~~~~~~   85 (256)
T cd08221          80 YANGGT   85 (256)
T ss_pred             ecCCCc
Confidence            999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.41  E-value=0.0012  Score=59.69  Aligned_cols=76  Identities=17%  Similarity=0.151  Sum_probs=48.7

Q ss_pred             eeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           55 KICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      -.+.++.|..+.+|+....       ...+.+|......    ...+..|...++.+..   -.+++++..... .+..+
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~   85 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC---HHVVRLLGVVSK-GQPTL   85 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcE
Confidence            3567899999999997532       1267888764321    1224456666666643   246666654332 45789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+++
T Consensus        86 lv~e~~~~g~L   96 (288)
T cd05061          86 VVMELMAHGDL   96 (288)
T ss_pred             EEEeCCCCCCH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=97.41  E-value=0.0012  Score=59.28  Aligned_cols=78  Identities=17%  Similarity=0.133  Sum_probs=51.4

Q ss_pred             eeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           53 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      +.-.+.++.|..+.+|++...      ++ .+.+|......   ...+..|.+.++.+.+   -.+.+++..... .+..
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~   82 (280)
T cd05092           7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH---QHIVRFYGVCTE-GRPL   82 (280)
T ss_pred             ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC---CCCceEEEEEec-CCce
Confidence            445677888999999998642      12 45666654321   3457778888887754   235555554433 3578


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        83 ~lv~e~~~~~~L   94 (280)
T cd05092          83 LMVFEYMRHGDL   94 (280)
T ss_pred             EEEEecCCCCCH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=97.41  E-value=0.0025  Score=58.36  Aligned_cols=73  Identities=15%  Similarity=0.157  Sum_probs=47.2

Q ss_pred             eeeCCcccceeEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeec
Q 020294           57 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE  130 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~  130 (328)
                      ..+|.|..+.||++...+    ..+++|...... ......|+.+++.+.+.   .+.+++...... +...+++||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHP---NVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCC---CCcceeeeEecCCCcEEEEEEeccC
Confidence            358899999999987532    368888875432 33466899999888653   233333322111 346789999987


Q ss_pred             CC
Q 020294          131 FG  132 (328)
Q Consensus       131 G~  132 (328)
                      +.
T Consensus        84 ~~   85 (317)
T cd07868          84 HD   85 (317)
T ss_pred             CC
Confidence            63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=97.41  E-value=0.0026  Score=58.29  Aligned_cols=78  Identities=18%  Similarity=0.184  Sum_probs=51.0

Q ss_pred             ceeeeeeeCCcccceeEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ....+..+|.|..+.||+... .++     .+++|......    ...+..|...++.+.+   -.+.+++....  .+.
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~g~~~--~~~   82 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   82 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEc--CCC
Confidence            345577889999999999864 222     37888875321    2345567777776643   23555665543  346


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++++++++++.+
T Consensus        83 ~~~v~e~~~~g~l   95 (316)
T cd05108          83 VQLITQLMPFGCL   95 (316)
T ss_pred             ceeeeecCCCCCH
Confidence            7899999988754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.40  E-value=0.004  Score=55.87  Aligned_cols=74  Identities=14%  Similarity=0.086  Sum_probs=47.6

Q ss_pred             eeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           57 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      ..++.|....+|+..... + .+++|......   ...+..|++.++.+.+.   .+++++..... .+..+++|||++|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~ii~~~~~~~~-~~~~~~v~e~~~~   86 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NIVKLLDAFYY-ENNLWILIEFCAG   86 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCC---CeeeEEEEEee-CCEEEEEEEecCC
Confidence            447778888999987653 3 56677664322   23455677777777532   34445543332 4678999999998


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        87 ~~l   89 (282)
T cd06643          87 GAV   89 (282)
T ss_pred             CcH
Confidence            753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=97.40  E-value=0.0024  Score=57.46  Aligned_cols=75  Identities=16%  Similarity=0.069  Sum_probs=49.4

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ++.++.|..+.+|++...  +..+++|..... .   ...+..|...++.+.+   -.+++++..... ++..+++|||+
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS---PYIVDFYGAFFI-EGAVYMCMEYM   81 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC---CcHHhhhhheec-CCeEEEEEeec
Confidence            456788889999999875  347888866432 1   2345567777776643   234444443332 46889999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|..+
T Consensus        82 ~~~~l   86 (286)
T cd06622          82 DAGSL   86 (286)
T ss_pred             CCCCH
Confidence            99853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=97.39  E-value=0.004  Score=57.02  Aligned_cols=80  Identities=18%  Similarity=0.165  Sum_probs=52.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeC---------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294           52 HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  118 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~---------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~  118 (328)
                      ...-.+.++.|....+|+++..         ...+++|..... .   ...+..|...++.+.++  -.+.+++..... 
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-   89 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--KNIINLLGVCTQ-   89 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--CCeeeEEEEEcc-
Confidence            3444677899999999998631         125778876532 1   23356788877777543  245556654433 


Q ss_pred             CCceEEEEeeecCCCC
Q 020294          119 TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 ~~~~~~v~e~l~G~~~  134 (328)
                      .+..+++|||++|+.+
T Consensus        90 ~~~~~lv~e~~~~g~L  105 (314)
T cd05099          90 EGPLYVIVEYAAKGNL  105 (314)
T ss_pred             CCceEEEEecCCCCcH
Confidence            4678999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.39  E-value=0.0026  Score=58.41  Aligned_cols=73  Identities=21%  Similarity=0.120  Sum_probs=49.5

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccc---cCCC-ceEEE
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTG-GSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~~~~-~~~~v  125 (328)
                      ..+-+|.|....||.....+ | .+.+|......   .+.+++|..+|..|.      .|+++.+..   ..++ ...+.
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCeeeEee
Confidence            34457789999999988764 4 66777765322   344778888887774      455555432   1133 58999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|+.
T Consensus        95 mEy~~~Gs  102 (313)
T KOG0198|consen   95 MEYAPGGS  102 (313)
T ss_pred             eeccCCCc
Confidence            99999985

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=97.39  E-value=0.00082  Score=60.53  Aligned_cols=75  Identities=16%  Similarity=0.027  Sum_probs=50.3

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ++.++.|..+.+|++... ++ .+++|+....    ....+..|.+.++.+.+   -.+++++..... .+..+++|||+
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   85 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS---PYIVSFYGAFLN-ENNICMCMEFM   85 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC---CCcceEeeeEec-CCEEEEEEecC
Confidence            456788899999998764 34 6777765432    12456678888877743   245555554433 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        86 ~~~~L   90 (284)
T cd06620          86 DCGSL   90 (284)
T ss_pred             CCCCH
Confidence            99753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.38  E-value=0.002  Score=60.21  Aligned_cols=75  Identities=12%  Similarity=0.135  Sum_probs=45.7

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~  122 (328)
                      -++.+|.|..+.||++...  +..+.+|.....  .   ...+..|...++.+.+.   .+.+++......     ....
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~   97 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKSLEEFQDV   97 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC---chhceeeeeecccccccccee
Confidence            3567899999999998753  337888876532  1   23345677777777542   233333321110     2356


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      +++|||++|.
T Consensus        98 ~lv~e~~~~~  107 (355)
T cd07874          98 YLVMELMDAN  107 (355)
T ss_pred             EEEhhhhccc
Confidence            9999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=97.38  E-value=0.00095  Score=59.30  Aligned_cols=74  Identities=14%  Similarity=0.044  Sum_probs=48.0

Q ss_pred             eeeCCcccceeEEEEe--CCccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           57 CPVGGGCINLASRYGT--DAGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +.++.|..+.+|++..  ++..+++|.....      ....+..|...++.+.+   -.+++++..... ++..+++||+
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~   83 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIVLEL   83 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC---CchhhhhheeEe-CCeEEEEEEe
Confidence            4567788889999885  3348889865421      12345567777777743   234445544332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        84 ~~~~~L   89 (267)
T cd08229          84 ADAGDL   89 (267)
T ss_pred             cCCCCH
Confidence            998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=97.37  E-value=0.0022  Score=57.50  Aligned_cols=73  Identities=10%  Similarity=0.043  Sum_probs=47.8

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +..++.|..+.+|+.... + ..+++|.....     ....+..|+.+++.+.+.   .+.+++..... ....+++|||
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~~v~e~   81 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP---NLVNLIEVFRR-KRKLHLVFEY   81 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCC---CEeeeeeEEee-CCEEEEEEec
Confidence            456788888999998764 2 37888876421     123456788888777542   24444433322 3577999999


Q ss_pred             ecCC
Q 020294          129 IEFG  132 (328)
Q Consensus       129 l~G~  132 (328)
                      ++|.
T Consensus        82 ~~~~   85 (286)
T cd07847          82 CDHT   85 (286)
T ss_pred             cCcc
Confidence            9985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=97.37  E-value=0.0023  Score=60.20  Aligned_cols=73  Identities=12%  Similarity=0.103  Sum_probs=46.3

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCC----CceEE
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~----~~~~~  124 (328)
                      .+.+|.|..+.||++... + ..+++|.....     ....+..|..+++.+.+.   .+.+++.......    ...++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD---NVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC---CcCCHhheecCCCccccceEEE
Confidence            456888999999998853 3 47899976532     123456788888877542   2333333322211    25789


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +|||+++
T Consensus        82 v~e~~~~   88 (372)
T cd07853          82 VTELMQS   88 (372)
T ss_pred             Eeecccc
Confidence            9999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=97.37  E-value=0.0034  Score=55.19  Aligned_cols=73  Identities=18%  Similarity=0.094  Sum_probs=48.2

Q ss_pred             eeeCCcccceeEEEEeC-C-ccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           57 CPVGGGCINLASRYGTD-A-GSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      +.++.|....+|+.... + ..+++|.....        ....+..|.+.++.+.+   -.+++++..... ....++++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~   81 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH---PNIVQYLGTERE-EDNLYIFL   81 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC---CCchheeeeEec-CCeEEEEE
Confidence            45788888899998764 3 47888876421        11345667777776643   234555544332 45789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|..
T Consensus        82 e~~~~~~   88 (258)
T cd06632          82 ELVPGGS   88 (258)
T ss_pred             EecCCCc
Confidence            9999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=97.36  E-value=0.0022  Score=57.56  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=50.5

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|++...+  ..+++|.....     ....+..|.+.++.+.+.   .+++++..... .+..+++|||
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~iv~e~   81 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE---NIVNLKEAFRR-KGRLYLVFEY   81 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCC---CeeehhheEEE-CCEEEEEEec
Confidence            4567888888999987643  37889976531     235577889888888642   34555544332 4578999999


Q ss_pred             ecCC
Q 020294          129 IEFG  132 (328)
Q Consensus       129 l~G~  132 (328)
                      ++++
T Consensus        82 ~~~~   85 (288)
T cd07833          82 VERT   85 (288)
T ss_pred             CCCC
Confidence            9985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.36  E-value=0.0018  Score=58.20  Aligned_cols=72  Identities=15%  Similarity=0.081  Sum_probs=47.5

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|++... +| .+++|.....     ....+..|++.++.+.+.   .+.+++..... .+..++++||
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~   80 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK---NIVRLYDVLHS-DKKLTLVFEY   80 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC---CeeeHHHHhcc-CCceEEEEec
Confidence            456788888999998764 34 6788876421     123466788888877542   34444443322 4578999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        81 ~~~   83 (284)
T cd07839          81 CDQ   83 (284)
T ss_pred             CCC
Confidence            876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.36  E-value=0.0022  Score=57.47  Aligned_cols=72  Identities=18%  Similarity=0.191  Sum_probs=48.4

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.++.|....+|++... + ..+++|.....     ....+..|.+.++.+.+   -.+++++..... .+..+++|||
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~iv~~~~~~~~-~~~~~iv~e~   79 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH---PNIVRLLDVVHS-ENKLYLVFEF   79 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC---CCccCHhheecc-CCeEEEEEec
Confidence            456788888999998753 3 37889977532     12346678888887753   245555554433 4688999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      +++
T Consensus        80 ~~~   82 (283)
T cd07835          80 LDL   82 (283)
T ss_pred             cCc
Confidence            864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=97.36  E-value=0.0033  Score=56.70  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=46.0

Q ss_pred             eeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           57 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      +.++.|..+.+|+.....       ..+.+|......    ...+..|...++.+.+   -.+.+++..... .+..+++
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv   81 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH---PHVIKLYGACSQ-DGPLLLI   81 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCCcEEE
Confidence            456788888999976421       246667665321    2345678777776643   234444443322 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      +||.+|+.+
T Consensus        82 ~e~~~~~~L   90 (290)
T cd05045          82 VEYAKYGSL   90 (290)
T ss_pred             EEecCCCCH
Confidence            999998754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=97.36  E-value=0.0037  Score=55.25  Aligned_cols=72  Identities=18%  Similarity=0.098  Sum_probs=46.3

Q ss_pred             eeCCcccceeEEEEe--CC---ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGT--DA---GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~--~~---~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+|.|..+.+|+...  .+   ..+++|......    ...+..|.+.++.+.+   -.+.+++....  ....+++|+|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~~~v~e~   76 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH---PCIVRLIGVCK--GEPLMLVMEL   76 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEc--CCceEEEEEe
Confidence            467788889988643  22   368899876432    2345667777777643   23444554433  3467999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+++
T Consensus        77 ~~~~~L   82 (257)
T cd05060          77 APLGPL   82 (257)
T ss_pred             CCCCcH
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=97.35  E-value=0.0033  Score=55.60  Aligned_cols=72  Identities=15%  Similarity=0.120  Sum_probs=46.0

Q ss_pred             eeCCcccceeEEEEe----CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGT----DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~----~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.|..+.+|+...    ....+++|+.....     ...+..|...++.+.+   -.+.+++....  ....+++||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN---PYIVRMIGICE--AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCcEEEEec
Confidence            467888889998643    22478889875321     2345667777776643   23455555432  3467899999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      .+++++
T Consensus        77 ~~~~~L   82 (257)
T cd05116          77 AELGPL   82 (257)
T ss_pred             CCCCcH
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.35  E-value=0.0035  Score=58.32  Aligned_cols=77  Identities=17%  Similarity=0.142  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||++...   +    ..+.+|+.....    ...+..|.+.++.+..+  -.+.+++......+...++
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--~niv~~~~~~~~~~~~~~~   89 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--LNVVNLLGACTKPGGPLMV   89 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--cchhheeeeEecCCCCEEE
Confidence            466888999999987521   1    368889875321    12345688888877443  2355555543332456789


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+.+
T Consensus        90 v~ey~~~~~L   99 (337)
T cd05054          90 IVEYCKFGNL   99 (337)
T ss_pred             EEecCCCCCH
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.35  E-value=0.0029  Score=55.74  Aligned_cols=72  Identities=15%  Similarity=0.135  Sum_probs=45.0

Q ss_pred             eeCCcccceeEEEEeCCc------------cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           58 PVGGGCINLASRYGTDAG------------SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~------------~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .+|.|..+.+|+....+.            .+++|......  ...+..|+..++.+.+   -.+.+++.....  +..+
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~~~~   76 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH---KHLVKLYGVCVR--DENI   76 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC---cchhheeeEEec--CCcE
Confidence            467888899998876432            25666654322  3445667777766643   234444444332  5679


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus        77 lv~e~~~~~~L   87 (259)
T cd05037          77 MVEEYVKFGPL   87 (259)
T ss_pred             EEEEcCCCCcH
Confidence            99999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.35  E-value=0.0016  Score=62.07  Aligned_cols=138  Identities=20%  Similarity=0.226  Sum_probs=84.3

Q ss_pred             eeeeeeeCCcccceeEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ..+++.||+|..+.||+-.. .+| -+.||.-+-+     .+-...+|+.+|+.|.+-.-+..-.++....  .+..|+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlV  196 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLV  196 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEE
Confidence            35688899999999999764 455 4556655421     2344678999999997642223333332221  3688999


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      +||.+-.            |+-|-..+.-  .|.         .                ..+..               
T Consensus       197 FeYMdhD------------L~GLl~~p~v--kft---------~----------------~qIKc---------------  222 (560)
T KOG0600|consen  197 FEYMDHD------------LSGLLSSPGV--KFT---------E----------------PQIKC---------------  222 (560)
T ss_pred             Eecccch------------hhhhhcCCCc--ccC---------h----------------HHHHH---------------
Confidence            9998764            2222211110  010         0                01221               


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                       .+.++++.+..     .....++|+|+++.|||+|++|++.|=||.
T Consensus       223 -~mkQLl~Gl~~-----cH~~gvlHRDIK~SNiLidn~G~LKiaDFG  263 (560)
T KOG0600|consen  223 -YMKQLLEGLEY-----CHSRGVLHRDIKGSNILIDNNGVLKIADFG  263 (560)
T ss_pred             -HHHHHHHHHHH-----HhhcCeeeccccccceEEcCCCCEEecccc
Confidence             23334444332     135689999999999999999999999974

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.33  E-value=0.0033  Score=57.26  Aligned_cols=74  Identities=11%  Similarity=0.050  Sum_probs=48.8

Q ss_pred             eeeeCCcccceeEEEEeCC----ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294           56 ICPVGGGCINLASRYGTDA----GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~  124 (328)
                      +..++.|..+.+|++....    ..+++|.....      ....+..|+.+++.+.+.   .+.+++...... ....++
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHE---NVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCC---CccceEEEEeCCCCceEEE
Confidence            3458888899999998743    48999987641      124456788888877542   344444443321 257899


Q ss_pred             EEeeecCC
Q 020294          125 IMEFIEFG  132 (328)
Q Consensus       125 v~e~l~G~  132 (328)
                      |||++++.
T Consensus        82 v~e~~~~~   89 (316)
T cd07842          82 LFDYAEHD   89 (316)
T ss_pred             EEeCCCcC
Confidence            99998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=97.33  E-value=0.0014  Score=58.76  Aligned_cols=75  Identities=17%  Similarity=0.119  Sum_probs=46.4

Q ss_pred             eeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ...++.|..+.+|+....       ...+.+|......    ...+..|...++.+..   -.+.+++..... .+..++
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~l   86 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQPTLV   86 (277)
T ss_pred             eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCeEE
Confidence            456788888899986532       1268888764321    1234567777766643   234455544332 457899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+.+
T Consensus        87 v~e~~~~~~L   96 (277)
T cd05062          87 IMELMTRGDL   96 (277)
T ss_pred             EEecCCCCCH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=97.33  E-value=0.0019  Score=57.34  Aligned_cols=75  Identities=20%  Similarity=0.089  Sum_probs=47.4

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~  124 (328)
                      .+.++.|..+.+|+....+ + .+++|.....     .   ...+..|+..++.+.+.   .+++++...... ....++
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE---RIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCC---CeeeEEeEeccCCCceEEE
Confidence            4567778888999987543 3 7888865321     1   13456688888877542   344455433221 245789


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +||+++|+.
T Consensus        84 v~e~~~~~~   92 (265)
T cd06652          84 FMEHMPGGS   92 (265)
T ss_pred             EEEecCCCc
Confidence            999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=97.32  E-value=0.0033  Score=55.89  Aligned_cols=78  Identities=26%  Similarity=0.154  Sum_probs=50.5

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ....+.++.|....+|++... ++    .+++|......    ...+..|++.++.+.+   ..+.+++..... .+..+
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~   82 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH---HNIIRLEGVVTK-FKPAM   82 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---CCeeEEEEEEcc-CCCcE
Confidence            344567888888999998753 22    57788765321    2345567777666643   245555554432 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++||+++|+.+
T Consensus        83 lv~e~~~~~~L   93 (268)
T cd05063          83 IITEYMENGAL   93 (268)
T ss_pred             EEEEcCCCCCH
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PTZ00284 protein kinase; Provisional

Probab=97.32  E-value=0.0031  Score=61.41  Aligned_cols=77  Identities=13%  Similarity=-0.030  Sum_probs=48.7

Q ss_pred             eeeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCC---CCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRT---IRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~---v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.+|.|..+.||+.....  ..+.+|+....  .......|.++++.+.....   ..+..++.+.....+..+++|+
T Consensus       133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~  212 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMP  212 (467)
T ss_pred             EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEe
Confidence            35678999999999987642  36888987532  12335668888887765322   2345555443332356788888


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      +..|
T Consensus       213 ~~g~  216 (467)
T PTZ00284        213 KYGP  216 (467)
T ss_pred             ccCC
Confidence            7643

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=97.31  E-value=0.0047  Score=56.66  Aligned_cols=91  Identities=13%  Similarity=0.030  Sum_probs=53.3

Q ss_pred             hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcc
Q 020294           38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAP  109 (328)
Q Consensus        38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP  109 (328)
                      .++....-...+......+..++.|....+|++... + ..+++|......      ...+..|++.++.+.+.   .+.
T Consensus        12 ~~~~~~~~~~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv   88 (317)
T cd06635          12 PEIAELFFKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHP---NSI   88 (317)
T ss_pred             HHHHHHhcCCCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCC---CEE
Confidence            334444433323323445677888998999998764 3 378888765321      12355677777766432   233


Q ss_pred             cceeccccCCCceEEEEeeecCC
Q 020294          110 RPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus       110 ~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +.+..... +...+++|||++|.
T Consensus        89 ~~~~~~~~-~~~~~lv~e~~~g~  110 (317)
T cd06635          89 EYKGCYLR-EHTAWLVMEYCLGS  110 (317)
T ss_pred             EEEEEEee-CCeEEEEEeCCCCC
Confidence            34433222 35789999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=97.31  E-value=0.0062  Score=55.23  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=47.8

Q ss_pred             eeeeCCcccceeEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.++.|....+|++...+ +   ...+|.....    ....+..|.+.+..+.++  -.+.+++..... .+..+++||
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~~lv~e   83 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH--PNIINLLGACEN-RGYLYIAIE   83 (297)
T ss_pred             eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC--CchhheEEEEcc-CCcceEEEE
Confidence            3457888999999986533 2   2455655421    123466788888877543  134455544332 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |.+++.+
T Consensus        84 ~~~~~~L   90 (297)
T cd05089          84 YAPYGNL   90 (297)
T ss_pred             ecCCCcH
Confidence            9998753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=97.30  E-value=0.0038  Score=55.91  Aligned_cols=78  Identities=15%  Similarity=0.153  Sum_probs=51.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-.+.+|.|..+.+|+.... ++     .+.+|......    ...+..|+..++.+.+   ..+.+++....  .+.
T Consensus         8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~   82 (279)
T cd05057           8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH---PHVVRLLGICL--SSQ   82 (279)
T ss_pred             HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEe--cCc
Confidence            3455677899999999998753 22     47788765432    2345667877777743   34555555443  267


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++|||++|+.+
T Consensus        83 ~~~v~e~~~~g~L   95 (279)
T cd05057          83 VQLITQLMPLGCL   95 (279)
T ss_pred             eEEEEecCCCCcH
Confidence            8999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=97.30  E-value=0.0035  Score=56.98  Aligned_cols=74  Identities=14%  Similarity=0.153  Sum_probs=47.8

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...++.|..+.+|++...  +..+++|.....   ....+..|...++.+.+   -.+++++..... .+..+++|||++
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~iv~e~~~  101 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---QNVVEMYKSYLV-GEELWVLMEFLQ  101 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC---Cchhhhhhheee-CCeEEEEEecCC
Confidence            445788888999998764  347888886421   23345567766666532   234445543322 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |..
T Consensus       102 ~~~  104 (297)
T cd06659         102 GGA  104 (297)
T ss_pred             CCC
Confidence            875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=97.29  E-value=0.0046  Score=54.91  Aligned_cols=75  Identities=16%  Similarity=0.041  Sum_probs=47.1

Q ss_pred             eeeCCcccceeEEEEeCC-----ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           57 CPVGGGCINLASRYGTDA-----GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      +.+|.|..+.+|+.....     ..+++|......     ...+..|...++.+.+   -.+.+++......     ...
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---PNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEeeeccCCccccCcc
Confidence            457888999999987532     258888765321     1345667777776643   2344555433221     124


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++++||++++.+
T Consensus        82 ~~~v~e~~~~~~l   94 (273)
T cd05035          82 PMVILPFMKHGDL   94 (273)
T ss_pred             cEEEEeccCCCCH
Confidence            7999999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.27  E-value=0.0025  Score=56.71  Aligned_cols=77  Identities=14%  Similarity=0.042  Sum_probs=48.8

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEE
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~  126 (328)
                      .+.++.|..+.+|+....+  ..+++|.....  ....+..|...++.+.++  -.+.+.+......     +...+++|
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~   88 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQLWLVM   88 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--CCeeeEeeEEeecCCCCCCcEEEEEE
Confidence            3457788888999987532  37888887532  234567788888877543  2344444332111     23578999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        89 e~~~~~~L   96 (272)
T cd06637          89 EFCGAGSV   96 (272)
T ss_pred             EcCCCCcH
Confidence            99998753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=97.27  E-value=0.0025  Score=57.11  Aligned_cols=133  Identities=20%  Similarity=0.230  Sum_probs=78.3

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCccccee-ccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFK-VGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~-~~~~~~~~~~~v  125 (328)
                      -+..+|.|...+|-.|+... | -|.+|+-....      .+....|..+|+.+.    .|.+.-+. ...+ .+.-|+|
T Consensus        48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~----~PFlv~l~~t~~d-~~~lymv  122 (355)
T KOG0616|consen   48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS----HPFLVKLYGTFKD-NSNLYMV  122 (355)
T ss_pred             heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc----CceeEEEEEeecc-CCeEEEE
Confidence            36667889999999998643 4 56667764321      122334566666553    34333332 2222 4688999


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      |||++|+.+          ..-+++...    |.                 ..-.-||+.+                   
T Consensus       123 meyv~GGEl----------FS~Lrk~~r----F~-----------------e~~arFYAAe-------------------  152 (355)
T KOG0616|consen  123 MEYVPGGEL----------FSYLRKSGR----FS-----------------EPHARFYAAE-------------------  152 (355)
T ss_pred             EeccCCccH----------HHHHHhcCC----CC-----------------chhHHHHHHH-------------------
Confidence            999999853          333333332    21                 0111233321                   


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                           ++-++. ++    ....|+.+||+|.|||+|.+|-.-|.||.
T Consensus       153 -----ivlAle-yl----H~~~iiYRDLKPENiLlD~~G~iKitDFG  189 (355)
T KOG0616|consen  153 -----IVLALE-YL----HSLDIIYRDLKPENLLLDQNGHIKITDFG  189 (355)
T ss_pred             -----HHHHHH-HH----HhcCeeeccCChHHeeeccCCcEEEEecc
Confidence                 111122 22    23479999999999999999988999974

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=97.27  E-value=0.0041  Score=55.61  Aligned_cols=73  Identities=16%  Similarity=0.174  Sum_probs=48.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e  127 (328)
                      ++.++.|..+.+|++...+  ..+++|.....     ....+..|++.++.+.+.   .+.+++...... .+..+++++
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP---NIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCC---CeeeheeeEecCCCCcEEEEec
Confidence            4567888899999998654  37888887642     123456788888877632   233344333321 267899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |+++
T Consensus        81 ~~~~   84 (287)
T cd07840          81 YMDH   84 (287)
T ss_pred             cccc
Confidence            9976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=97.26  E-value=0.004  Score=55.57  Aligned_cols=73  Identities=11%  Similarity=0.067  Sum_probs=44.1

Q ss_pred             eeCCcccceeEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.+|+....++    ..++|......    ...+..|...++.+.+   -.+.+.+..... ....+++|||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH---PNILQCLGQCVE-AIPYLLVFEYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC---cchhheEEEecC-CCccEEEEecC
Confidence            477888889998754322    45667654321    2345566666665532   245555544332 35679999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus        78 ~~~~L   82 (268)
T cd05086          78 ELGDL   82 (268)
T ss_pred             CCCcH
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=97.26  E-value=0.0034  Score=55.95  Aligned_cols=75  Identities=21%  Similarity=0.114  Sum_probs=48.2

Q ss_pred             eeeeCCcccceeEEEEeC----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+.++.|....||+....    .+ .+.+|......    ...+..|+..++.+.+   -.+++++..... .+..++||
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~   85 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH---SNIVRLEGVITR-GNTMMIVT   85 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEec-CCCcEEEE
Confidence            455888999999987542    12 56677765321    2345567777766532   345666655432 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        86 e~~~~~~L   93 (266)
T cd05064          86 EYMSNGAL   93 (266)
T ss_pred             EeCCCCcH
Confidence            99999853

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.26  E-value=0.0047  Score=55.52  Aligned_cols=75  Identities=9%  Similarity=-0.023  Sum_probs=43.3

Q ss_pred             eCCcccceeEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.|..+.+|++... + ..+.+|......      ......|...++.+.....-.++..+..... .+..+++|||++
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~   80 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLMN   80 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecCC
Confidence            577888999998653 3 378888765311      1223345555555543211123333332222 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        81 g~~L   84 (278)
T cd05606          81 GGDL   84 (278)
T ss_pred             CCcH
Confidence            9754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=97.26  E-value=0.0023  Score=62.98  Aligned_cols=27  Identities=30%  Similarity=0.246  Sum_probs=24.3

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||++++++...|+||.
T Consensus       162 ~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        162 KHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence            469999999999999988888999975

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=97.25  E-value=0.0063  Score=54.18  Aligned_cols=75  Identities=17%  Similarity=0.061  Sum_probs=48.9

Q ss_pred             eeeeeCCcccceeEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.+.++.|..+.+|+....+     ..+++|......    ...+..|+..++.+.+   -.+.+.+....  ++..+++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~--~~~~~lv   84 (270)
T cd05056          10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH---PHIVKLIGVIT--ENPVWIV   84 (270)
T ss_pred             eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CchhceeEEEc--CCCcEEE
Confidence            34667888889999976422     257888876432    2346678877777743   23455554433  3567899


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        85 ~e~~~~~~L   93 (270)
T cd05056          85 MELAPLGEL   93 (270)
T ss_pred             EEcCCCCcH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=97.25  E-value=0.0012  Score=61.06  Aligned_cols=70  Identities=10%  Similarity=-0.027  Sum_probs=45.6

Q ss_pred             eeCCcccceeEEEEeC--CccEEEEecCCCCc-----------------chHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294           58 PVGGGCINLASRYGTD--AGSFFVKTNRSIGP-----------------SMFEGEALGLGAMYETRTIRAPRPFKVGALP  118 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~-----------------~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~  118 (328)
                      .++.|..+.+|++...  +..+++|.......                 ..+..|.++++.+.+.   .+++++..... 
T Consensus        16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-   91 (335)
T PTZ00024         16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE---NIMGLVDVYVE-   91 (335)
T ss_pred             cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc---ceeeeeEEEec-
Confidence            4688888999998754  33788998753211                 1255788888877542   34444444322 


Q ss_pred             CCceEEEEeeecC
Q 020294          119 TGGSYIIMEFIEF  131 (328)
Q Consensus       119 ~~~~~~v~e~l~G  131 (328)
                      .+..+++||+++|
T Consensus        92 ~~~~~lv~e~~~~  104 (335)
T PTZ00024         92 GDFINLVMDIMAS  104 (335)
T ss_pred             CCcEEEEEecccc
Confidence            4678999999976

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=97.25  E-value=0.0046  Score=55.43  Aligned_cols=73  Identities=18%  Similarity=0.161  Sum_probs=49.0

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .++.++.|..+.+|+.... + ..+++|.....     ....+..|++.++.+.+   -.+.+++..... .+..+++||
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   79 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE   79 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC---CCCcchhhhccc-CCcEEEEee
Confidence            4667888899999998753 3 37888876531     12356778888888854   234445544332 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |+.+
T Consensus        80 ~~~~   83 (284)
T cd07860          80 FLHQ   83 (284)
T ss_pred             cccc
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=97.24  E-value=0.0034  Score=56.26  Aligned_cols=73  Identities=16%  Similarity=0.107  Sum_probs=45.1

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|..+.+|+....+  ..+++|.....    .......|...+..+.++  -.+++++..... .+..+++|||+
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~   80 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--PNIVKLKEVFRE-NDELYFVFEYM   80 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--CCchhHHHHhhc-CCcEEEEEecC
Confidence            3457888889999988643  36888876532    112233566666666522  234445544332 46889999999


Q ss_pred             cC
Q 020294          130 EF  131 (328)
Q Consensus       130 ~G  131 (328)
                      .|
T Consensus        81 ~~   82 (283)
T cd07830          81 EG   82 (283)
T ss_pred             CC
Confidence            44

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=97.24  E-value=0.0028  Score=55.68  Aligned_cols=75  Identities=13%  Similarity=-0.002  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|..+.+|++... + ..+++|.....     ....+..|.+.++.+..   -.+++++..... ....+++||+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~   80 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH---PNIISYKEAFLD-GNKLCIVMEY   80 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC---CCchhhhhhhcc-CCEEEEEehh
Confidence            456788888899998753 3 37899986531     12234567777776653   245555544332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        81 ~~~~~L   86 (256)
T cd08530          81 APFGDL   86 (256)
T ss_pred             cCCCCH
Confidence            998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.24  E-value=0.0047  Score=55.28  Aligned_cols=74  Identities=15%  Similarity=0.063  Sum_probs=43.3

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.++.|..+.+|++... ++ .+++|......    ...+..|...+....++  -.+.+++..... ++..+++|||
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~iv~~~~~~~~-~~~~~lv~e~   81 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--PYTVTFYGALFR-EGDVWICMEV   81 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--CCeeeeeEEEec-CCcEEEEhhh
Confidence            4567888999999998764 34 78889765321    11222343332222221  234455544332 4678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        82 ~~~   84 (283)
T cd06617          82 MDT   84 (283)
T ss_pred             hcc
Confidence            876

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=97.24  E-value=0.005  Score=54.76  Aligned_cols=76  Identities=17%  Similarity=0.012  Sum_probs=47.6

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~  124 (328)
                      .+.++.|..+.+|++... . ..+++|.....     .   ...+..|..+++.+.+.   .+.+++...... ....++
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---RIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC---CeeeEEEEEEcCCCCEEEE
Confidence            355788888999998753 2 37888876421     0   13466788888887542   233333322211 356789


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ++|+++|..+
T Consensus        84 ~~e~~~~~~L   93 (266)
T cd06651          84 FMEYMPGGSV   93 (266)
T ss_pred             EEeCCCCCcH
Confidence            9999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.23  E-value=0.00026  Score=61.17  Aligned_cols=100  Identities=14%  Similarity=0.100  Sum_probs=62.4

Q ss_pred             hhhcCChhHHHHHHHhcC--CCc-cee---eeeeeCCcccceeEEEE--eCCccEEEEecCCCCcchHHHHHHHHHHHHh
Q 020294           31 AMAALSDDPIREWILSEG--KAT-HIT---KICPVGGGCINLASRYG--TDAGSFFVKTNRSIGPSMFEGEALGLGAMYE  102 (328)
Q Consensus        31 ~~~~~~~~~i~~~l~~~~--~~~-~i~---~v~~i~~G~~n~~y~v~--~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~  102 (328)
                      ||+.+....=+++..=..  ..+ .+.   -+..+|.|-.+.||.-.  +++.+.|+|+-.+.....+.+|+.+|+-|..
T Consensus        12 vya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g   91 (338)
T KOG0668|consen   12 VYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG   91 (338)
T ss_pred             hhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC
Confidence            566666655555552110  000 111   24567888889888854  4556899999877666789999999999975


Q ss_pred             cCCCCcccceeccccC-CCceEEEEeeecCC
Q 020294          103 TRTIRAPRPFKVGALP-TGGSYIIMEFIEFG  132 (328)
Q Consensus       103 ~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~  132 (328)
                        +-.+-+++....++ ...+.+|+|++...
T Consensus        92 --g~NIi~L~DiV~Dp~SktpaLiFE~v~n~  120 (338)
T KOG0668|consen   92 --GPNIIKLLDIVKDPESKTPSLIFEYVNNT  120 (338)
T ss_pred             --CCCeeehhhhhcCccccCchhHhhhhccc
Confidence              33444455444333 24667777776654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=97.23  E-value=0.004  Score=63.12  Aligned_cols=76  Identities=17%  Similarity=0.077  Sum_probs=56.4

Q ss_pred             eeeeCCcccceeEEEEe-CCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~e  127 (328)
                      ++.++.|....+|++.. .++ .-.+||-...  ..+.++.|..+|+.+..+  -.|++-|.+....    ++.-|+|||
T Consensus        24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVME  101 (953)
T KOG0587|consen   24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVME  101 (953)
T ss_pred             EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEee
Confidence            45567788889999875 334 4567887642  356688999999999875  5688887765332    468899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |+.|+.
T Consensus       102 fC~gGS  107 (953)
T KOG0587|consen  102 FCGGGS  107 (953)
T ss_pred             ccCCcc
Confidence            999985

>PTZ00036 glycogen synthase kinase; Provisional

Probab=97.23  E-value=0.0058  Score=59.13  Aligned_cols=79  Identities=14%  Similarity=0.038  Sum_probs=47.5

Q ss_pred             eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~  126 (328)
                      -.-.+.+|.|..+.||+.... . ..+++|..... .....+|+.+++.+.+..-+.+...+......    ....+++|
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm  146 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM  146 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence            444667899999999998764 3 37888876432 23456789888888643212222222211111    12356899


Q ss_pred             eeecCC
Q 020294          127 EFIEFG  132 (328)
Q Consensus       127 e~l~G~  132 (328)
                      ||++|.
T Consensus       147 E~~~~~  152 (440)
T PTZ00036        147 EFIPQT  152 (440)
T ss_pred             ecCCcc
Confidence            999863

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=97.22  E-value=0.0029  Score=55.65  Aligned_cols=75  Identities=17%  Similarity=0.154  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|....+|++....  ..+++|.....     ....+..|++.++.+.+.   .+++++..... .+..++++||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~---~i~~~~~~~~~-~~~~~lv~e~   80 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP---NIVTFFASFQE-NGRLFIVMEY   80 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCC---Chhhhhheecc-CCeEEEEEec
Confidence            4567888889999987643  37888886431     234567788888877542   34445443322 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|..+
T Consensus        81 ~~~~~L   86 (257)
T cd08225          81 CDGGDL   86 (257)
T ss_pred             CCCCcH
Confidence            998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.22  E-value=0.0043  Score=55.66  Aligned_cols=77  Identities=14%  Similarity=0.031  Sum_probs=49.4

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceecccc-----CCCceEEEE
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-----~~~~~~~v~  126 (328)
                      ++.++.|..+.+|+.... + ..+++|.....  ....+..|..+++.+.++  -.+.+.+.....     .....+++|
T Consensus        21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~   98 (282)
T cd06636          21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPGHDDQLWLVM   98 (282)
T ss_pred             heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccCCCCEEEEEE
Confidence            456788889999998763 3 37888887532  234466777777777543  234444433211     124679999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        99 e~~~~~~L  106 (282)
T cd06636          99 EFCGAGSV  106 (282)
T ss_pred             EeCCCCcH
Confidence            99998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.00032  Score=72.53  Aligned_cols=135  Identities=17%  Similarity=0.209  Sum_probs=79.9

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      +.-||.|..+.|..|.-.  +.-|..|+-..      .....|..|..+|-.--   +--+-.+.+.-.+ +..-|+||+
T Consensus        80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n---s~Wiv~LhyAFQD-~~~LYlVMd  155 (1317)
T KOG0612|consen   80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN---SEWIVQLHYAFQD-ERYLYLVMD  155 (1317)
T ss_pred             HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC---cHHHHHHHHHhcC-ccceEEEEe
Confidence            345788899998888753  23565565432      12355666766653211   1112222222221 467899999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |.+|+.+          |.-|-+       |+ .       .      ..+|.-||..+ +                   
T Consensus       156 Y~pGGDl----------ltLlSk-------~~-~-------~------pE~~ArFY~aE-i-------------------  184 (1317)
T KOG0612|consen  156 YMPGGDL----------LTLLSK-------FD-R-------L------PEDWARFYTAE-I-------------------  184 (1317)
T ss_pred             cccCchH----------HHHHhh-------cC-C-------C------hHHHHHHHHHH-H-------------------
Confidence            9999853          333322       33 1       1      14788888542 1                   


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccc
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY  254 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~  254 (328)
                          +-.+..+     ...+.||+|++|+|||+|..|..-+=||+.|
T Consensus       185 ----VlAldsl-----H~mgyVHRDiKPDNvLld~~GHikLADFGsC  222 (1317)
T KOG0612|consen  185 ----VLALDSL-----HSMGYVHRDIKPDNVLLDKSGHIKLADFGSC  222 (1317)
T ss_pred             ----HHHHHHH-----HhccceeccCCcceeEecccCcEeeccchhH
Confidence                1111111     2458999999999999999998889998543

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=97.20  E-value=0.006  Score=55.30  Aligned_cols=77  Identities=13%  Similarity=0.078  Sum_probs=49.1

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-++.++.|..+.+|+....  +..+++|.....   ....+..|...++.+.+   -.+++++..... ....++|+||
T Consensus        22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~   97 (293)
T cd06647          22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH---PNIVNYLDSYLV-GDELWVVMEY   97 (293)
T ss_pred             eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC---CCeeehhheeee-CCcEEEEEec
Confidence            34567888999999998753  347888886532   22345567776666642   123444433222 3578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        98 ~~~~~L  103 (293)
T cd06647          98 LAGGSL  103 (293)
T ss_pred             CCCCcH
Confidence            998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.20  E-value=0.0061  Score=54.55  Aligned_cols=76  Identities=14%  Similarity=0.056  Sum_probs=48.1

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCC----CceEE
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~----~~~~~  124 (328)
                      ++.++.|..+.+|++....  ..+++|.....  .   ...+..|...++.+.+...-.+.+++......+    ...++
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   83 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL   83 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence            4567788888999998753  48999987631  1   223556888888886422223455554433211    13789


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +||++++
T Consensus        84 ~~e~~~~   90 (287)
T cd07838          84 VFEHVDQ   90 (287)
T ss_pred             Eehhccc
Confidence            9999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=97.20  E-value=0.0037  Score=58.04  Aligned_cols=75  Identities=16%  Similarity=0.099  Sum_probs=43.0

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEE
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v  125 (328)
                      -++.+|.|..+.||++... + ..+++|.....     ....+..|..+++.+.+..-+.+..++......  ....+++
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   98 (343)
T cd07878          19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV   98 (343)
T ss_pred             hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence            3567899999999998753 3 37888886532     123345688888877543211222222111110  1345788


Q ss_pred             Eeee
Q 020294          126 MEFI  129 (328)
Q Consensus       126 ~e~l  129 (328)
                      +++.
T Consensus        99 ~~~~  102 (343)
T cd07878          99 TNLM  102 (343)
T ss_pred             eecC
Confidence            8876

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=97.20  E-value=0.0032  Score=57.16  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=49.3

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...++.|..+.+|+.... ++ .+++|.....   ....+..|...++.+.+   -.+++++..... ....+++|||++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~  100 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVMEFLE  100 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC---cchhheeeEEEe-CCEEEEEEecCC
Confidence            456788888999998763 33 7888876421   12346667777777754   234445443322 457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       101 ~~~L  104 (292)
T cd06657         101 GGAL  104 (292)
T ss_pred             CCcH
Confidence            9753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=97.20  E-value=0.0036  Score=56.53  Aligned_cols=75  Identities=21%  Similarity=0.191  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeCC------------------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCccccee
Q 020294           56 ICPVGGGCINLASRYGTDA------------------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~------------------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      ++.+|.|..+.+|++...+                  ..+++|......    ...+..|+++++.+.+.   .+.+++.
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~   86 (296)
T cd05051          10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDP---NIARLLG   86 (296)
T ss_pred             cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCC---CEeEEEE
Confidence            5667888888999876542                  136778765321    34466788888887542   3444554


Q ss_pred             ccccCCCceEEEEeeecCCCC
Q 020294          114 VGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       114 ~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .... ++..+++||+++|+.+
T Consensus        87 ~~~~-~~~~~lv~e~~~~~~L  106 (296)
T cd05051          87 VCTV-DPPLCMIMEYMENGDL  106 (296)
T ss_pred             EEec-CCCcEEEEecCCCCCH
Confidence            4332 4678999999998753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=97.19  E-value=0.0029  Score=56.24  Aligned_cols=73  Identities=25%  Similarity=0.173  Sum_probs=46.0

Q ss_pred             eeCCcccceeEEEEeCC--------ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           58 PVGGGCINLASRYGTDA--------GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--------~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+|.|..+.+|+.+..+        ..+.+|.....    ....+..|+..++.+.+   -.+.+++..... .+..+++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v   77 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH---PNIVKLLGVCLL-NEPQYII   77 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC---CCeeeEeeeecC-CCCeEEE
Confidence            46778888999887532        25777765432    13345667777776643   234444444332 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      ||+++|+++
T Consensus        78 ~e~~~~~~L   86 (269)
T cd05044          78 MELMEGGDL   86 (269)
T ss_pred             EeccCCCcH
Confidence            999999754

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=97.19  E-value=0.0042  Score=56.03  Aligned_cols=77  Identities=16%  Similarity=0.103  Sum_probs=50.7

Q ss_pred             eeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           54 TKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .-...++.|..+.+|++.+.      ++ .+++|......   ...+..|.+.++.+.+.   .+++++..... .+..+
T Consensus         8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~   83 (288)
T cd05093           8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE---HIVKFYGVCVE-GDPLI   83 (288)
T ss_pred             eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCC---CcceEEEEEec-CCccE
Confidence            33455788889999998752      12 46777765422   23466788888877542   34455544432 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||.+|+.+
T Consensus        84 lv~e~~~~~~L   94 (288)
T cd05093          84 MVFEYMKHGDL   94 (288)
T ss_pred             EEEEcCCCCCH
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=97.19  E-value=0.0094  Score=55.10  Aligned_cols=76  Identities=16%  Similarity=0.155  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           56 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .+.++.|..+.+|++....         ..+.+|......    ...+..|.++++.+.++.  .+.+++..... .+..
T Consensus        17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~-~~~~   93 (334)
T cd05100          17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHK--NIINLLGACTQ-DGPL   93 (334)
T ss_pred             cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCC--CeeeeeEEEcc-CCce
Confidence            5678889999999986311         157788765321    234667888888875432  34445544332 4578


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||++|+.+
T Consensus        94 ~lv~e~~~~g~L  105 (334)
T cd05100          94 YVLVEYASKGNL  105 (334)
T ss_pred             EEEEecCCCCcH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=97.19  E-value=0.0037  Score=57.64  Aligned_cols=73  Identities=12%  Similarity=0.090  Sum_probs=45.5

Q ss_pred             eeCCc--ccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGG--CINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G--~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .||.|  ....+|++... ++ .+.+|.....     ....+..|.++++.+.+   -.+.+++..... ++..++||||
T Consensus         5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~   80 (327)
T cd08227           5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELWVVTSF   80 (327)
T ss_pred             hccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence            35666  45678887653 44 6778876532     12346667877777743   234445544332 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        81 ~~~~~l   86 (327)
T cd08227          81 MAYGSA   86 (327)
T ss_pred             cCCCcH
Confidence            998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=97.18  E-value=0.0083  Score=53.71  Aligned_cols=78  Identities=22%  Similarity=0.100  Sum_probs=50.3

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..-++.++.|..+.+|++...+       ..+.+|..+...    ...+..|...++.+.+   -.+.+++..... .+.
T Consensus         8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~   83 (277)
T cd05036           8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH---QNIVRLIGVSFE-RLP   83 (277)
T ss_pred             cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCC
Confidence            3345678889999999987643       267778765321    2335567777776643   234455544332 456


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .+++||+++|+.+
T Consensus        84 ~~lv~e~~~g~~L   96 (277)
T cd05036          84 RFILLELMAGGDL   96 (277)
T ss_pred             cEEEEecCCCCCH
Confidence            7999999999764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=97.18  E-value=0.0045  Score=59.17  Aligned_cols=77  Identities=16%  Similarity=0.146  Sum_probs=52.7

Q ss_pred             eeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           55 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      -.+.+|.|..+.||++...+       ..+.+|......    ...+..|.++|..+..+  -.+.+.+..... .+..+
T Consensus        41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--~niv~~~~~~~~-~~~~~  117 (401)
T cd05107          41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--LNIVNLLGACTK-GGPIY  117 (401)
T ss_pred             hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--CCeEEEEEEEcc-CCCcE
Confidence            35678999999999987421       268889876421    23466788888887532  235555555433 45789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus       118 iv~E~~~~g~L  128 (401)
T cd05107         118 IITEYCRYGDL  128 (401)
T ss_pred             EEEeccCCCcH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial

Probab=97.18  E-value=0.024  Score=49.99  Aligned_cols=214  Identities=12%  Similarity=0.146  Sum_probs=110.7

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~~~  134 (328)
                      -+++++|+ ..-||+    |..|+|.-.......  --.++.+.|.- .++.+.+|+...... --..|-..+|++|.. 
T Consensus        18 p~~Lg~~w-~~gwr~----G~vVls~v~~~~~Aa--WsAkvre~L~~-~GvRvaRPvrstDGRyVv~GWrA~~fv~G~~-   88 (272)
T TIGR02569        18 PIQLGAAW-DGGWRV----GNVVFSMVADPARSA--WSARVRETLFP-DGVRVVRPVRSTDGRYVVAGWRADTFVAGTP-   88 (272)
T ss_pred             cccCCCCC-CCcEEe----ccEEEeccCCchhhh--hhHHhhhhccC-CCeeEecceecCCCCeEecceeeccccCCCc-
Confidence            33465444 555777    567888754321111  11233334443 378888888764211 113466778899984 


Q ss_pred             CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHH-------Hhh-CCChHHH
Q 020294          135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLA-------LDQ-YGDSTIY  205 (328)
Q Consensus       135 ~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~-------~~~-~~~~~~~  205 (328)
                      .....++...--+||......     +.+.+..      .|.+  .+.|. ..|.... +..       ... ..++ ..
T Consensus        89 ~~R~DEvv~aalrlh~Ala~~-----~~P~fl~------~~~~--~d~fa~ADraAW~-e~p~~~~~~~~~~~~~~~-~~  153 (272)
T TIGR02569        89 EPRVDETVVAALRLHEALGDL-----ERPGPAA------PWAE--IDVFVAADRAAWE-ERPLQSVPPGVPTAPPAA-DP  153 (272)
T ss_pred             CcchHHHHHHHHHHHHHHhcC-----CCCcccc------ccch--hhHHHHHHHHHhh-cccccccccccccccccc-hh
Confidence            466667777777888888632     2221111      1211  12221 2222210 000       000 0011 11


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh----hh-cCCChhhHHHHhh
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSYFE  280 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~----~~-~~~~~~f~~~Y~~  280 (328)
                      ....+++..+..+......+..++||||. +|+||....-++|+|.-.++=+..|=-+..    .+ ++.++.+++.+..
T Consensus       154 ~~~~~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw~h  232 (272)
T TIGR02569       154 QRSIDLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERFSH  232 (272)
T ss_pred             hHHHHHHHHHHHHhcccCCCcceeeeecc-cceeecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHhcc
Confidence            11222333333333333467889999996 679998877789999665555555555543    12 5677888888543


Q ss_pred             hCCCCCCH---HHHHHHHHHH
Q 020294          281 VMPKQPGF---EKRRDLYMLY  298 (328)
Q Consensus       281 ~~pl~~~~---~~r~~ly~l~  298 (328)
                      .    ++|   ..|.-+|+++
T Consensus       233 ~----p~~~QlllRAllfRl~  249 (272)
T TIGR02569       233 L----PEWPQLLLRALMFRLA  249 (272)
T ss_pred             C----cchHHHHHHHHHHHHH
Confidence            2    334   3455566543

This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.17  E-value=0.0043  Score=55.13  Aligned_cols=76  Identities=18%  Similarity=0.075  Sum_probs=48.1

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~  124 (328)
                      .+.++.|..+.+|+.... ++ .+++|.....        ....+..|+++++.+.+.   .+.+++...... .+..++
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---RIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC---CcceEEEEEEcCCCCEEEE
Confidence            446788888999998753 23 7888875321        123466788888888542   234444432221 246789


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ++|+++|..+
T Consensus        84 v~e~~~~~~L   93 (264)
T cd06653          84 FVEYMPGGSI   93 (264)
T ss_pred             EEEeCCCCcH
Confidence            9999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=97.17  E-value=0.0049  Score=55.08  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=46.8

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC--Cc--chHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~  128 (328)
                      ++.++.|..+.+|++... + ..+++|.....  ..  .....|...+..+.++  -.+++++...... .+..+++|||
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--PNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--CCccceEEEEecCCCCcEEEEEec
Confidence            456788888999999864 2 37888876532  11  1123566666666543  2455566554332 2678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      .+|
T Consensus        82 ~~~   84 (282)
T cd07831          82 MDM   84 (282)
T ss_pred             CCc
Confidence            876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PHA02988 hypothetical protein; Provisional

Probab=97.17  E-value=0.0059  Score=55.20  Aligned_cols=75  Identities=11%  Similarity=0.007  Sum_probs=52.0

Q ss_pred             eeeCCcccceeEEEEeCCccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceecccc--C-CCceEEEEe
Q 020294           57 CPVGGGCINLASRYGTDAGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIME  127 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~-~~~~~~v~e  127 (328)
                      ..++.|....+|+-..++..+++|......      ...+..|+.+++.+.+.   .+.+++.....  . ....+++||
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN---NILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC---CEEEEeeeEEecccCCCceEEEEE
Confidence            456778888999988877789999876421      24456888888888542   45566654322  1 246789999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus       103 y~~~g~L  109 (283)
T PHA02988        103 YCTRGYL  109 (283)
T ss_pred             eCCCCcH
Confidence            9999864

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=97.17  E-value=0.0046  Score=64.92  Aligned_cols=78  Identities=18%  Similarity=0.068  Sum_probs=51.2

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v  125 (328)
                      .-++.|+.|..+.||++.... + .+++|.....     ....+..|+.+++.|.+.   .+.+++...... ....|+|
T Consensus        16 eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HP---NIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         16 EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHK---NIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             EEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCC---CcCeEEEEEEecCCCEEEEE
Confidence            346778999999999998643 3 5677775421     134466788888888642   344444432111 3567999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        93 MEY~~gGSL  101 (1021)
T PTZ00266         93 MEFCDAGDL  101 (1021)
T ss_pred             EeCCCCCcH
Confidence            999999854

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=97.16  E-value=0.0052  Score=53.98  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=49.9

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.++.|..+.+|++...  ...+++|.....     ....+..|++.++.+.+.   .+++++..... ++..++|||
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHP---NIIEYYENFLE-DKALMIVME   79 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCC---chhheeeeEec-CCEEEEEEe
Confidence            3567888888899997753  347888876532     123466788888877532   23444433221 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      +++|+.+
T Consensus        80 ~~~~~~L   86 (256)
T cd08220          80 YAPGGTL   86 (256)
T ss_pred             cCCCCCH
Confidence            9999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=97.16  E-value=0.0069  Score=53.90  Aligned_cols=73  Identities=15%  Similarity=0.073  Sum_probs=43.8

Q ss_pred             eeCCcccceeEEEEeCCc--------------cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           58 PVGGGCINLASRYGTDAG--------------SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~--------------~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+|.|..+.+|+......              ..++|.......   ..+..|...++.+.+   -.+.+++.+... +.
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h---p~iv~~~~~~~~-~~   77 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH---KHIVLLYGVCVR-DV   77 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CC
Confidence            467788888898753211              467777654222   234455555555532   245555554432 45


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus        78 ~~~lv~e~~~~~~l   91 (262)
T cd05077          78 ENIMVEEFVEFGPL   91 (262)
T ss_pred             CCEEEEecccCCCH
Confidence            77999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=97.15  E-value=0.0048  Score=56.28  Aligned_cols=75  Identities=17%  Similarity=0.093  Sum_probs=47.3

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v  125 (328)
                      ..++.++.|....+|+.... + ..+++|.....     ....+..|.++++.+.+.   .+.+++..-... .+..+++
T Consensus        10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845          10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP---NIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC---CCcceEEEEecCCCCeEEEE
Confidence            34556788899999998764 2 37888876521     122345788888888653   233344332111 2467999


Q ss_pred             EeeecC
Q 020294          126 MEFIEF  131 (328)
Q Consensus       126 ~e~l~G  131 (328)
                      |||.++
T Consensus        87 ~e~~~~   92 (309)
T cd07845          87 MEYCEQ   92 (309)
T ss_pred             EecCCC
Confidence            999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=97.14  E-value=0.0054  Score=60.13  Aligned_cols=145  Identities=15%  Similarity=0.110  Sum_probs=79.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcC---CCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETR---TIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~---~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.+|.|....|.+.... .+ .+.+|+-.+..  ...-..|+.+|+.|.++.   ...+-+.+.+-.. .+..++|+| 
T Consensus       191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~HlciVfE-  268 (586)
T KOG0667|consen  191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLCIVFE-  268 (586)
T ss_pred             EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-ccceeeeeh-
Confidence            556677777777776543 23 56678876532  123346899999998532   2334444443322 234455555 


Q ss_pred             ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294          129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  208 (328)
Q Consensus       129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  208 (328)
                                 .|..-|-.+.+...-   -|++.                       ..+..                ..
T Consensus       269 -----------LL~~NLYellK~n~f---~Glsl-----------------------~~ir~----------------~~  295 (586)
T KOG0667|consen  269 -----------LLSTNLYELLKNNKF---RGLSL-----------------------PLVRK----------------FA  295 (586)
T ss_pred             -----------hhhhhHHHHHHhcCC---CCCCH-----------------------HHHHH----------------HH
Confidence                       444456666554431   12110                       01111                12


Q ss_pred             HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC--CeEEEccc-cc-cCCchh
Q 020294          209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG--EPVILDPA-CY-YGHNEA  260 (328)
Q Consensus       209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~--~~~iID~~-~~-~G~p~~  260 (328)
                      .+++..+.- |    ....|||+||+|+|||+-+-+  .+.||||. +| .+...+
T Consensus       296 ~Qil~~L~~-L----~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy  346 (586)
T KOG0667|consen  296 QQILTALLF-L----HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY  346 (586)
T ss_pred             HHHHHHHHH-H----HhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence            223333221 2    145899999999999996543  36899985 44 454444

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=97.14  E-value=0.0056  Score=54.36  Aligned_cols=75  Identities=16%  Similarity=0.043  Sum_probs=46.9

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .+.++.|..+.+|++...  +..+++|......   ...+..|...++.+.+   -.+.+.+..... .+..+++|||++
T Consensus        14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~   89 (267)
T cd06645          14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH---SNIVAYFGSYLR-RDKLWICMEFCG   89 (267)
T ss_pred             HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCeeeEEEEEEe-CCEEEEEEeccC
Confidence            345678888899998753  2378888765322   2335567776666633   123334433222 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        90 ~~~L   93 (267)
T cd06645          90 GGSL   93 (267)
T ss_pred             CCcH
Confidence            8754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.14  E-value=0.0062  Score=53.25  Aligned_cols=75  Identities=12%  Similarity=0.092  Sum_probs=56.5

Q ss_pred             ceeeeeeeCCcccceeEEEE-eCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~-~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +..-+.+||.|.....|.-. ..+| .+.+|.-+.. .-..+-.|..+++.|+.  ++-.|.+.+++.. ....++||+-
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVMdL   92 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVMDL   92 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc--CCCCchhhhhccc-cccceeeeec
Confidence            56678899999999999854 3455 7889998753 22446689999999976  5778888888764 3577899985


Q ss_pred             e
Q 020294          129 I  129 (328)
Q Consensus       129 l  129 (328)
                      +
T Consensus        93 L   93 (341)
T KOG1163|consen   93 L   93 (341)
T ss_pred             c
Confidence            4

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.11  E-value=0.0068  Score=56.56  Aligned_cols=75  Identities=12%  Similarity=0.119  Sum_probs=47.3

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      ..++.++.|..+.+|++...  +..+++|.....     ....+..|+.+++.+.+.   .+.+++......     ...
T Consensus        19 ~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          19 QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHK---NIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             EEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCC---CCcceeeeeccCCCccccCc
Confidence            34677899999999998763  348899986431     123345688887777542   234444322110     135


Q ss_pred             eEEEEeeecC
Q 020294          122 SYIIMEFIEF  131 (328)
Q Consensus       122 ~~~v~e~l~G  131 (328)
                      .+++|||++|
T Consensus        96 ~~lv~e~~~~  105 (353)
T cd07850          96 VYLVMELMDA  105 (353)
T ss_pred             EEEEEeccCC
Confidence            6999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=97.11  E-value=0.0097  Score=52.40  Aligned_cols=72  Identities=22%  Similarity=0.194  Sum_probs=47.6

Q ss_pred             eeCCcccceeEEEEeCC--c---cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGTDA--G---SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.|..+.+|++...+  +   .+++|..+....    ..+..|...++.+.+.   .+.+++....  +...+++||+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~--~~~~~~v~e~   76 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHE---NLIRLYGVVL--THPLMMVTEL   76 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCC---CccceeEEEc--CCeEEEEEEe
Confidence            46788889999987532  2   478898875322    3456678777777542   2344444333  2578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      .+|+++
T Consensus        77 ~~~~~L   82 (257)
T cd05040          77 APLGSL   82 (257)
T ss_pred             cCCCcH
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.11  E-value=0.013  Score=51.98  Aligned_cols=75  Identities=13%  Similarity=-0.012  Sum_probs=49.7

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...++.|..+.+|+....+ + .+++|......   ...+..|+.+++.+..   -.+.+++..... .+..++++||++
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~   88 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH---RNIVQYLGSDSE-NGFFKIFMEQVP   88 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC---CCeeeeeeeecc-CCEEEEEEecCC
Confidence            3467888889999997543 3 68888765322   2346678888777753   234445544332 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        89 ~~~L   92 (268)
T cd06624          89 GGSL   92 (268)
T ss_pred             CCCH
Confidence            9754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=97.10  E-value=0.0048  Score=55.97  Aligned_cols=74  Identities=14%  Similarity=0.157  Sum_probs=47.0

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...++.|..+.+|++...  +..+++|.....   ....+..|...++.+.+   -.+.+++..... .+..+++|||++
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~  102 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH---ENVVDMYNSYLV-GDELWVVMEFLE  102 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC---CcHHHHHHheec-CCeEEEEEeCCC
Confidence            455778888999998764  347888876432   12345667777776643   223333333222 457899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus       103 ~~~  105 (292)
T cd06658         103 GGA  105 (292)
T ss_pred             CCc
Confidence            875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.10  E-value=0.006  Score=55.09  Aligned_cols=73  Identities=19%  Similarity=0.185  Sum_probs=50.2

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..+.++.|..+.+|++... ++ .+++|.....     ....+..|++.++.+.+   -.+++++..... ....++|||
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   81 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFE   81 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEe
Confidence            3466788888999998754 33 7999987532     12346678888888854   245666655433 468899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |+++
T Consensus        82 ~~~~   85 (294)
T PLN00009         82 YLDL   85 (294)
T ss_pred             cccc
Confidence            9865

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.06  E-value=0.0055  Score=55.00  Aligned_cols=54  Identities=17%  Similarity=0.124  Sum_probs=31.7

Q ss_pred             cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           76 SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        76 ~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      .+++|.......   ..+..|+..++.+.+   -.+++++.+... .+..++||||++|+.
T Consensus        46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h---~niv~~~~~~~~-~~~~~lv~ey~~~g~  102 (274)
T cd05076          46 RVVLKVLDPSHRDIALAFFETASLMSQVSH---IHLAFVHGVCVR-GSENIMVEEFVEHGP  102 (274)
T ss_pred             eEEEEecChHHHHHHHHHHHHHHHHhcCCC---CCeeeEEEEEEe-CCceEEEEecCCCCc
Confidence            366776643211   223345555554432   346666665443 467899999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=97.05  E-value=0.0063  Score=53.94  Aligned_cols=74  Identities=12%  Similarity=0.074  Sum_probs=48.9

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      +.++.|..+.+|++...  +..+++|..+...         ...+..|++.++.+.+.   .+++++..... .+..+++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~~v   81 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP---HIIRMLGATCE-DSHFNLF   81 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC---ceehhhceecc-CCeEEEE
Confidence            45788889999998752  3478888775311         23466788888887542   34444443322 4578999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||.+|+.+
T Consensus        82 ~e~~~~~~L   90 (268)
T cd06630          82 VEWMAGGSV   90 (268)
T ss_pred             EeccCCCcH
Confidence            999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=97.05  E-value=0.015  Score=52.21  Aligned_cols=27  Identities=22%  Similarity=0.175  Sum_probs=23.8

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||++++++.+.++|+.
T Consensus       128 ~~iiH~dlkp~nili~~~~~~kl~Dfg  154 (279)
T cd05111         128 HRMVHRNLAARNILLKSDSIVQIADFG  154 (279)
T ss_pred             CCEeccccCcceEEEcCCCcEEEcCCc
Confidence            359999999999999988878899974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=97.04  E-value=0.0058  Score=55.36  Aligned_cols=76  Identities=12%  Similarity=0.069  Sum_probs=46.2

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ..-++.++.|..+.+|++...+  ..+++|......    ...+..|...+..+..+  -.+++++..... ....+++|
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~v~   93 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC--PYIVKCYGYFIT-DSDVFICM   93 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC--CchHhhheeeec-CCeEEEEe
Confidence            3446778889999999998763  478888875321    11233344444443322  235555554432 45789999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      |++++
T Consensus        94 e~~~~   98 (296)
T cd06618          94 ELMST   98 (296)
T ss_pred             eccCc
Confidence            99765

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=97.02  E-value=0.0091  Score=53.53  Aligned_cols=74  Identities=11%  Similarity=0.023  Sum_probs=45.9

Q ss_pred             eeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ++.+|.|..+.+|+....       ...+.+|......    ...+..|..++..+.+   -.+.+++..... .+..++
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~~   85 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH---PNIVCLLGVVTK-EQPLSM   85 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEcC-CCceEE
Confidence            345677888889987642       1368888876432    1335567766665543   234445544332 356789


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +++|.++..
T Consensus        86 ~~e~~~~~~   94 (283)
T cd05091          86 IFSYCSHSD   94 (283)
T ss_pred             EEEcCCCCc
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.01  E-value=0.0023  Score=59.19  Aligned_cols=76  Identities=13%  Similarity=0.080  Sum_probs=45.5

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|....+|++...  +..+++|.....     ....+..|+.+++.+.+..-+.+..++..........+++|||
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~   89 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL   89 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence            456788888899998764  338888876431     1234556888888886321112222222211113467999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      +.|
T Consensus        90 ~~~   92 (334)
T cd07855          90 MES   92 (334)
T ss_pred             hhh
Confidence            865

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=97.01  E-value=0.011  Score=54.95  Aligned_cols=76  Identities=17%  Similarity=0.096  Sum_probs=45.3

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCC--CceEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYI  124 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~--~~~~~  124 (328)
                      ..+..+|.|..+.+|++... ++ .+++|.....     ....+..|++.++.+.+..-+....++..+....  ...++
T Consensus        18 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07880          18 RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL   97 (343)
T ss_pred             EEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence            34678899999999998753 34 7888976421     1234567888888885432112222222211101  24589


Q ss_pred             EEeee
Q 020294          125 IMEFI  129 (328)
Q Consensus       125 v~e~l  129 (328)
                      +|+++
T Consensus        98 v~e~~  102 (343)
T cd07880          98 VMPFM  102 (343)
T ss_pred             EEecC
Confidence            99998

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.99  E-value=0.0031  Score=60.91  Aligned_cols=94  Identities=15%  Similarity=0.154  Sum_probs=58.8

Q ss_pred             CChhHHHHHHHhc-C---CCcceeeeeeeCCcccceeEEEEe-CCc-cEEEEecC---CCCcchHHHHHHHHHHHHhcCC
Q 020294           35 LSDDPIREWILSE-G---KATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNR---SIGPSMFEGEALGLGAMYETRT  105 (328)
Q Consensus        35 ~~~~~i~~~l~~~-~---~~~~i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~---~~~~~~~~~E~~~l~~L~~~~~  105 (328)
                      ++..++..-++.. .   +-......+.+|.|.+..||.-.- ..+ ...+|...   ...++.+-.|..+|+-+.+   
T Consensus       253 ~~~~~~~~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H---  329 (550)
T KOG0578|consen  253 VSKEEILAKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH---  329 (550)
T ss_pred             chHHHHHHHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc---
Confidence            3444788877765 1   223556788899999999998653 233 44455442   1235677788888876643   


Q ss_pred             CCcccceecc-ccC-CCceEEEEeeecCCCC
Q 020294          106 IRAPRPFKVG-ALP-TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       106 v~VP~~~~~~-~~~-~~~~~~v~e~l~G~~~  134 (328)
                         |.++-+- ... .+.-|+||||++|+.+
T Consensus       330 ---~NiVnfl~Sylv~deLWVVMEym~ggsL  357 (550)
T KOG0578|consen  330 ---PNIVNFLDSYLVGDELWVVMEYMEGGSL  357 (550)
T ss_pred             ---hHHHHHHHHhcccceeEEEEeecCCCch
Confidence               2233221 111 3567999999999865

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=96.99  E-value=0.01  Score=53.32  Aligned_cols=73  Identities=14%  Similarity=0.107  Sum_probs=47.0

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.++.|..+.+|++....  ..+++|.....    ....+..|...+..+..+  -.+++++..... ++..+++||++
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~~~~~~~~-~~~~~~~~e~~   85 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--PYIVKFYGALFR-EGDCWICMELM   85 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--CCEeeeeeEEec-CCcEEEEEecc
Confidence            4557888889999987642  37888876532    123455677777666532  245555554433 46789999997


Q ss_pred             cC
Q 020294          130 EF  131 (328)
Q Consensus       130 ~G  131 (328)
                      ++
T Consensus        86 ~~   87 (288)
T cd06616          86 DI   87 (288)
T ss_pred             cC
Confidence            75

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=96.98  E-value=0.0054  Score=55.35  Aligned_cols=73  Identities=16%  Similarity=0.102  Sum_probs=46.1

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e  127 (328)
                      ++.++.|....+|++.... + .+++|......     ...+..|...+..+.+   -.++.++...... .+..+++||
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~lv~e   86 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH---PNIVTVKEVVVGSNLDKIYMVME   86 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC---CCEEEEEEEEEecCCCcEEEEeh
Confidence            4567788888999988753 3 67888765311     1234567777777753   2345554433221 268899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |+++
T Consensus        87 ~~~~   90 (293)
T cd07843          87 YVEH   90 (293)
T ss_pred             hcCc
Confidence            9976

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=96.98  E-value=0.0098  Score=55.06  Aligned_cols=74  Identities=12%  Similarity=0.068  Sum_probs=44.8

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccc---cC-CCceEE
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---LP-TGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~~-~~~~~~  124 (328)
                      -.+.++.|..+.+|++... + ..+++|.....    ....+..|..+++.+.+.   .+.+++....   .. ....++
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l   85 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE---NIIGILDIIRPPSFESFNDVYI   85 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC---CcCchhheeecccccccceEEE
Confidence            3567888888999998653 3 37889976532    123355678778877642   2333332211   11 235689


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      ++|++++
T Consensus        86 v~e~~~~   92 (336)
T cd07849          86 VQELMET   92 (336)
T ss_pred             Eehhccc
Confidence            9999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=96.95  E-value=0.011  Score=53.65  Aligned_cols=77  Identities=17%  Similarity=0.134  Sum_probs=45.6

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceE
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~  123 (328)
                      -++.++.|..+.+|+.... + ..+++|.....     ....+..|++.++.+.+..-+++..+......    ..+..+
T Consensus        16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   95 (310)
T cd07865          16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY   95 (310)
T ss_pred             EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence            3566888899999999764 2 37888876421     12234568888888854321222222211111    024569


Q ss_pred             EEEeeecC
Q 020294          124 IIMEFIEF  131 (328)
Q Consensus       124 ~v~e~l~G  131 (328)
                      ++|||.++
T Consensus        96 lv~e~~~~  103 (310)
T cd07865          96 LVFEFCEH  103 (310)
T ss_pred             EEEcCCCc
Confidence            99999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=96.95  E-value=0.013  Score=53.17  Aligned_cols=75  Identities=11%  Similarity=0.068  Sum_probs=46.2

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-------CC
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------PT  119 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-------~~  119 (328)
                      .-.+.++.|..+.+|++...  +..+++|.....     .......|.+.++.+.+.   .+.+++.....       ..
T Consensus        11 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~   87 (311)
T cd07866          11 EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP---NVVPLIDMAVERPDKSKRKR   87 (311)
T ss_pred             EEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC---CccchhhheecccccccccC
Confidence            33556888889999998764  347888876421     123456788888888543   23333322111       02


Q ss_pred             CceEEEEeeecC
Q 020294          120 GGSYIIMEFIEF  131 (328)
Q Consensus       120 ~~~~~v~e~l~G  131 (328)
                      ...+++++|.++
T Consensus        88 ~~~~lv~~~~~~   99 (311)
T cd07866          88 GSVYMVTPYMDH   99 (311)
T ss_pred             ceEEEEEecCCc
Confidence            356899999775

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=96.93  E-value=0.012  Score=52.20  Aligned_cols=75  Identities=17%  Similarity=0.130  Sum_probs=47.0

Q ss_pred             eeeCCcccceeEEEEeCC-c---cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-----CCCce
Q 020294           57 CPVGGGCINLASRYGTDA-G---SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGS  122 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-----~~~~~  122 (328)
                      +.++.|..+.||+....+ +   .+.+|.....     ....+..|.+.++.+.+   -.+.+++.....     .....
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH---PNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEccCCcccCCCCc
Confidence            346888889999987643 2   4777876431     12345668888777743   235555543211     01356


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|+|++|+.+
T Consensus        82 ~~v~e~~~~~~l   93 (272)
T cd05075          82 VVILPFMKHGDL   93 (272)
T ss_pred             EEEEEeCCCCcH
Confidence            899999998753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=96.92  E-value=0.013  Score=54.25  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=46.7

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -+..++.|..+.+|++... ++ .+++|....     .....+..|.++++.+.+-   .+.+++..........++++|
T Consensus        14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~lv~e   90 (328)
T cd07856          14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHE---NIISLSDIFISPLEDIYFVTE   90 (328)
T ss_pred             EEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCC---CeeeEeeeEecCCCcEEEEee
Confidence            4577888999999998754 33 788886532     1134466788888877542   233333332221346789999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      +..+
T Consensus        91 ~~~~   94 (328)
T cd07856          91 LLGT   94 (328)
T ss_pred             hhcc
Confidence            8743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.91  E-value=0.00093  Score=64.98  Aligned_cols=160  Identities=18%  Similarity=0.177  Sum_probs=95.8

Q ss_pred             CChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCCC------cchHHHHHHHHHHHHhcCCC
Q 020294           35 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG------PSMFEGEALGLGAMYETRTI  106 (328)
Q Consensus        35 ~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v  106 (328)
                      +.+.+|.++.....+.--...+..||.|..+.||...+...  .+.+|.-...+      -..+-+|+.+|+.|.     
T Consensus        10 lKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-----   84 (948)
T KOG0577|consen   10 LKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-----   84 (948)
T ss_pred             CCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-----
Confidence            56778888886664443445688899999999999887543  33344332211      234667887776653     


Q ss_pred             Ccccceecccc--CCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH
Q 020294          107 RAPRPFKVGAL--PTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA  184 (328)
Q Consensus       107 ~VP~~~~~~~~--~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~  184 (328)
                       -|..+.+..+  .+...|+||||+=|...         -|-..|+-+.-                              
T Consensus        85 -HPntieYkgCyLre~TaWLVMEYClGSAs---------DlleVhkKplq------------------------------  124 (948)
T KOG0577|consen   85 -HPNTIEYKGCYLREHTAWLVMEYCLGSAS---------DLLEVHKKPLQ------------------------------  124 (948)
T ss_pred             -CCCcccccceeeccchHHHHHHHHhccHH---------HHHHHHhccch------------------------------
Confidence             4555554322  25688999999988621         23456664430                              


Q ss_pred             HhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchh
Q 020294          185 EHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEA  260 (328)
Q Consensus       185 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~  260 (328)
                      +..|...                -...+..+. ++-    .-..||+|++.||||+.+.|.+.+-||+ +.+.+|+-
T Consensus       125 EvEIAAi----------------~~gaL~gLa-YLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn  180 (948)
T KOG0577|consen  125 EVEIAAI----------------THGALQGLA-YLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN  180 (948)
T ss_pred             HHHHHHH----------------HHHHHHHHH-HHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence            0011110                111222222 232    2368999999999999988877777764 33444433

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=96.90  E-value=0.021  Score=50.93  Aligned_cols=77  Identities=18%  Similarity=0.134  Sum_probs=48.3

Q ss_pred             eeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           54 TKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .-...++.|..+.+|+....+       ..+.+|......    ...+..|+..++.+.+   -.+.+++..... .+..
T Consensus         9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~   84 (277)
T cd05032           9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC---HHVVRLLGVVST-GQPT   84 (277)
T ss_pred             eEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEcC-CCCc
Confidence            345678888999999976532       368888875321    1234456666665532   234445544332 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++|||.+++.+
T Consensus        85 ~~v~e~~~~~~L   96 (277)
T cd05032          85 LVVMELMAKGDL   96 (277)
T ss_pred             EEEEecCCCCCH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=96.90  E-value=0.0038  Score=59.73  Aligned_cols=143  Identities=22%  Similarity=0.230  Sum_probs=89.3

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +..+|.|+...|+.-.-... +.-+|.-..  ...+.+.+|+++++.|.+.   .+-+.+++... ++.-+|||||++-+
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~---~lV~l~gV~~~-~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHE---KLVKLYGVCTK-QEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCccc---CeEEEEEEEec-CCceEEEEEecccC
Confidence            55678899998888766543 555554432  2346677999999999863   56677777654 34579999999887


Q ss_pred             CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294          133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  212 (328)
Q Consensus       133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  212 (328)
                      .+       -+.|..    ..     |-    .+                    .+..             +.....++.
T Consensus       287 sL-------l~yLr~----~~-----~~----~l--------------------~~~~-------------Ll~~a~qIa  313 (468)
T KOG0197|consen  287 SL-------LDYLRT----RE-----GG----LL--------------------NLPQ-------------LLDFAAQIA  313 (468)
T ss_pred             cH-------HHHhhh----cC-----CC----cc--------------------chHH-------------HHHHHHHHH
Confidence            53       222222    10     00    00                    0000             112223334


Q ss_pred             HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchh
Q 020294          213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA  260 (328)
Q Consensus       213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~~  260 (328)
                      +.+. +++    ...+||+||-..|||++++....|=||. + ..++-+|
T Consensus       314 eGM~-YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  314 EGMA-YLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             HHHH-HHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence            4333 444    4579999999999999988878899985 3 3555554

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=96.89  E-value=0.017  Score=51.08  Aligned_cols=74  Identities=12%  Similarity=0.126  Sum_probs=43.5

Q ss_pred             eeCCcccceeEEEEeCC-----ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGTDA-----GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .++.|..+.+|+....+     ..+++|..... .   ...+..|...++.+.+   -.+.+++......++..+++|+|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH---PNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC---CCcceEEEEeecCCCCcEEEEec
Confidence            46778888999876421     15778876432 1   2334456666655532   12333444322224578999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      .+++.+
T Consensus        79 ~~~~~L   84 (262)
T cd05058          79 MKHGDL   84 (262)
T ss_pred             CCCCCH
Confidence            988753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.88  E-value=0.0025  Score=57.75  Aligned_cols=65  Identities=14%  Similarity=0.028  Sum_probs=44.2

Q ss_pred             cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcC
Q 020294           76 SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG  152 (328)
Q Consensus        76 ~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~  152 (328)
                      .|.||+-..   +.+..+-+|++.+..-..+  ..+-+++..-++ +...|+|||.+.|+++          |.++|.-.
T Consensus       105 EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGpl----------LshI~~~~  171 (463)
T KOG0607|consen  105 EYAVKIIDKQPGHSRSRVFREVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGPL----------LSHIQKRK  171 (463)
T ss_pred             hhhhhhhhcCCchHHHHHHHHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCchH----------HHHHHHhh
Confidence            677777643   3456677888887766554  334455544332 5789999999999986          77777755


Q ss_pred             C
Q 020294          153 K  153 (328)
Q Consensus       153 ~  153 (328)
                      .
T Consensus       172 ~  172 (463)
T KOG0607|consen  172 H  172 (463)
T ss_pred             h
Confidence            3

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=96.84  E-value=0.012  Score=52.55  Aligned_cols=72  Identities=15%  Similarity=0.118  Sum_probs=46.7

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.++.|..+.+|+.....  ..+++|.....     ....+..|+..++.+.+   -.+++++..... .+..++++|+
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~   79 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH---PNIVKLLDVIHT-ERKLYLVFEY   79 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC---CCHHHHHhhhhc-CCceEEEecC
Confidence            3457778889999987753  48888987642     12345567777776643   234444444332 3678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      .++
T Consensus        80 ~~~   82 (282)
T cd07829          80 CDM   82 (282)
T ss_pred             cCc
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=96.84  E-value=0.013  Score=53.47  Aligned_cols=59  Identities=10%  Similarity=0.118  Sum_probs=35.8

Q ss_pred             eCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           72 TDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        72 ~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      ..+..+++|.....     ....+..|++.++.+.+..-++   ++..... .+..+++|||++++.+
T Consensus        23 ~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~---~~~~~~~-~~~~~~~~e~~~~~~l   86 (314)
T cd08216          23 PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP---YVTSFIV-DSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhh---hhheeec-CCeEEEEEeccCCCCH
Confidence            33458888886532     2345778888888886421112   2222111 4578999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=96.83  E-value=0.01  Score=54.69  Aligned_cols=68  Identities=10%  Similarity=0.040  Sum_probs=43.3

Q ss_pred             cccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           62 GCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        62 G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      |....+|+....  +..+.+|+.....     ...++.|..+++.+.+.   .+.+++..... .+..++++|+++|+.
T Consensus        11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---niv~~~~~~~~-~~~~~~v~e~~~~~~   85 (328)
T cd08226          11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHP---NIMTSWTVFTT-GSWLWVISPFMAYGS   85 (328)
T ss_pred             cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCC---CcceEeeeEec-CCceEEEEecccCCC
Confidence            366689998763  3478888875321     24466677776666542   34455554433 457899999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=96.82  E-value=0.0048  Score=56.80  Aligned_cols=73  Identities=15%  Similarity=0.191  Sum_probs=46.6

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~  124 (328)
                      .+.++.|..+.+|++...+  ..+++|.....     ....+..|...++.+.+.   .+.+++......    ....++
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHE---NIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCc---chhhhhhhhcccCcccccceEE
Confidence            4568888899999998653  47888876532     134567788888877532   233344332221    136799


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +|+|+++
T Consensus        82 v~e~~~~   88 (330)
T cd07834          82 VTELMET   88 (330)
T ss_pred             Eecchhh
Confidence            9998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=96.82  E-value=0.0076  Score=57.14  Aligned_cols=75  Identities=15%  Similarity=0.065  Sum_probs=51.9

Q ss_pred             eeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           57 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +.+|.|....||+..... | .|-+|.-...      ....+..|+++|+.|..+  -.+-.++..-.+ ....++|||.
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL  117 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMEL  117 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEe
Confidence            678999999999998754 4 6777776431      125788999999999753  123333333222 3577999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      +.|+.+
T Consensus       118 ~~GGeL  123 (382)
T KOG0032|consen  118 CEGGEL  123 (382)
T ss_pred             cCCchH
Confidence            999853

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=96.80  E-value=0.0066  Score=55.37  Aligned_cols=143  Identities=21%  Similarity=0.221  Sum_probs=85.5

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+..|+.|...-|||.... ++ -+.||.-... .    +-..-+|+.+|....+..-+.|-.|+ +|.. -+..|+|||
T Consensus        80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV-vG~~-~d~iy~VMe  157 (419)
T KOG0663|consen   80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV-VGSN-MDKIYIVME  157 (419)
T ss_pred             HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE-eccc-cceeeeeHH
Confidence            4667889999999999753 23 4556654421 1    22234788888777643223444444 3322 356899999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |++-.        +..   -||....+   |+.      +                   ..                +-.
T Consensus       158 ~~EhD--------Lks---l~d~m~q~---F~~------~-------------------ev----------------K~L  182 (419)
T KOG0663|consen  158 YVEHD--------LKS---LMETMKQP---FLP------G-------------------EV----------------KTL  182 (419)
T ss_pred             HHHhh--------HHH---HHHhccCC---Cch------H-------------------HH----------------HHH
Confidence            98863        111   23443321   220      0                   00                112


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCch
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNE  259 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~  259 (328)
                      ..++++.+..+     ...-++|+||++.|+|....|...|-||. + .||.|.
T Consensus       183 ~~QlL~glk~l-----H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  183 MLQLLRGLKHL-----HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             HHHHHHHHHHH-----hhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            22334433322     23469999999999999988989999985 4 599983

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.79  E-value=0.015  Score=53.80  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=55.3

Q ss_pred             eeeeeCCcccceeEEEEeCCc---cEEEEecCCC---CcchHHHHHHHHHHHHh-cCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDAG---SFFVKTNRSI---GPSMFEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~---~~vlK~~~~~---~~~~~~~E~~~l~~L~~-~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -...+|.|..+.+|.+...+.   .+++|.-...   ....+..|..++..+.. ..+..+|.++..+....+..|+||+
T Consensus        22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~  101 (322)
T KOG1164|consen   22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS  101 (322)
T ss_pred             EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence            356689999999999987543   5888887542   12268889999999985 2246899999988422567899988


Q ss_pred             ee
Q 020294          128 FI  129 (328)
Q Consensus       128 ~l  129 (328)
                      -+
T Consensus       102 l~  103 (322)
T KOG1164|consen  102 LL  103 (322)
T ss_pred             cc
Confidence            53

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=96.78  E-value=0.006  Score=53.43  Aligned_cols=27  Identities=22%  Similarity=0.171  Sum_probs=24.0

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||+++.++...++|+.
T Consensus       104 ~~i~H~dlkp~Nil~~~~~~~~l~df~  130 (237)
T cd05576         104 EGIVCRDLNPNNILLDDRGHIQLTYFS  130 (237)
T ss_pred             CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence            469999999999999988888899964

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=96.76  E-value=0.02  Score=52.14  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=47.0

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...++.++.|..+.+|++... ++     .+++|.......    ..+..|...++.+.+   -.+.+++....  ....
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~--~~~~   83 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH---PHLVRLLGVCL--SPTI   83 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--CCCc
Confidence            445667899999999998652 23     367787654221    234567776666643   23444444332  2356


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      ++++++.+++.+
T Consensus        84 ~~v~e~~~~g~l   95 (303)
T cd05110          84 QLVTQLMPHGCL   95 (303)
T ss_pred             eeeehhcCCCCH
Confidence            789999888653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA03210 serine/threonine kinase US3; Provisional

Probab=96.76  E-value=0.0027  Score=62.52  Aligned_cols=27  Identities=30%  Similarity=0.278  Sum_probs=24.4

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.|||++.++...|+||.
T Consensus       286 ~gIiHrDLKP~NILl~~~~~vkL~DFG  312 (501)
T PHA03210        286 KKLIHRDIKLENIFLNCDGKIVLGDFG  312 (501)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEEeCC
Confidence            469999999999999988888999974

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=96.74  E-value=0.0058  Score=57.70  Aligned_cols=74  Identities=14%  Similarity=0.059  Sum_probs=41.6

Q ss_pred             eeCCcccceeEEE-EeCCccEE-EEecCC-CC-----c----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           58 PVGGGCINLASRY-GTDAGSFF-VKTNRS-IG-----P----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        58 ~i~~G~~n~~y~v-~~~~~~~v-lK~~~~-~~-----~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+|.|..+.||+. +....+|| +||..- ..     .    ....+|.++.+.|-+   -.+.+.|.+-.......+.|
T Consensus       470 LLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH---pRIVKlYDyfslDtdsFCTV  546 (775)
T KOG1151|consen  470 LLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH---PRIVKLYDYFSLDTDSFCTV  546 (775)
T ss_pred             HhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc---ceeeeeeeeeeeccccceee
Confidence            3567777888884 44556665 477541 10     0    112345555554422   23344444433324678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      +||++|..+
T Consensus       547 LEYceGNDL  555 (775)
T KOG1151|consen  547 LEYCEGNDL  555 (775)
T ss_pred             eeecCCCch
Confidence            999999764

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.69  E-value=0.0012  Score=58.68  Aligned_cols=71  Identities=17%  Similarity=0.096  Sum_probs=45.1

Q ss_pred             eeeCCcccceeEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccc--c-CCC-ceEEE
Q 020294           57 CPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA--L-PTG-GSYII  125 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~--~-~~~-~~~~v  125 (328)
                      +.||.|..+.+|++++ .+| .+++|--.-.     ....+.+|..+|+.|.+      |.++.+..  . .+. --+++
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H------pNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH------PNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC------chHHHHHHHhhhccchhhHHH
Confidence            4578999999999986 455 4555543221     23456678888887753      44443322  1 123 36899


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      ||++++++
T Consensus        99 mE~c~~GD  106 (375)
T KOG0591|consen   99 MELCDAGD  106 (375)
T ss_pred             HHhhcccC
Confidence            99999875

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=96.68  E-value=0.018  Score=51.10  Aligned_cols=76  Identities=17%  Similarity=0.137  Sum_probs=50.2

Q ss_pred             eeeeeCCcccceeEEEEeC------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           55 KICPVGGGCINLASRYGTD------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.+.||.|....+|+.+..      ...++||..... .   ...+..|++.++.+ ++  -.+.+++..... .+..++
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h--~ni~~~~g~~~~-~~~~~l   78 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RH--PNIVKLYGFCIE-NEPLFL   78 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SB--TTBE-EEEEEES-SSSEEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cc--cccccccccccc-cccccc
Confidence            3567899999999998876      126888988542 1   24566777777777 32  356666665542 456899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      |+||++++.+
T Consensus        79 v~e~~~~g~L   88 (259)
T PF07714_consen   79 VMEYCPGGSL   88 (259)
T ss_dssp             EEE--TTEBH
T ss_pred             cccccccccc
Confidence            9999998753

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=96.67  E-value=0.023  Score=51.31  Aligned_cols=74  Identities=16%  Similarity=0.157  Sum_probs=45.5

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC---------C
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---------T  119 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---------~  119 (328)
                      .+.++.|..+.+|+..... + .+++|.....     ....+..|.+.++.+.+.   .+.+++......         .
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---~i~~~~~~~~~~~~~~~~~~~~   88 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR---NIVNLKEIVTDKQDALDFKKDK   88 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC---CeeeeeheecCcchhhhccccC
Confidence            3557788889999988743 3 6777876531     123456788888777532   233333322110         2


Q ss_pred             CceEEEEeeecCC
Q 020294          120 GGSYIIMEFIEFG  132 (328)
Q Consensus       120 ~~~~~v~e~l~G~  132 (328)
                      +..++++||++|.
T Consensus        89 ~~~~lv~e~~~~~  101 (302)
T cd07864          89 GAFYLVFEYMDHD  101 (302)
T ss_pred             CcEEEEEcccCcc
Confidence            3678999998873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=96.65  E-value=0.028  Score=51.84  Aligned_cols=74  Identities=12%  Similarity=0.108  Sum_probs=45.8

Q ss_pred             eeeeCCcccceeEEEEeCC---c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc---CCCceE
Q 020294           56 ICPVGGGCINLASRYGTDA---G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~---~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~~  123 (328)
                      .+.++.|..+.+|++....   + .+++|..+..     ....+..|.+.++.+.++.  .+++.+.....   .....+
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~~~~~~~~~~   82 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHK--NITCLYDMDIVFPGNFNELY   82 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCC--ChheeeeeeeeccccCCcEE
Confidence            4557888889999998642   3 6888876531     1234567888888886542  34455543211   123567


Q ss_pred             EEEeeecC
Q 020294          124 IIMEFIEF  131 (328)
Q Consensus       124 ~v~e~l~G  131 (328)
                      +++++.++
T Consensus        83 ~~~e~~~~   90 (332)
T cd07857          83 LYEELMEA   90 (332)
T ss_pred             EEEecccC
Confidence            88887764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=96.65  E-value=0.039  Score=49.29  Aligned_cols=75  Identities=12%  Similarity=0.061  Sum_probs=48.5

Q ss_pred             eeeeCCcccceeEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           56 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .+.++.|....+|+....+      ..+++|......    ...+..|...++.+.+   ..+.+++..........+++
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~~   87 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH---QNILPILHVCIEDGEPPFVL   87 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEecCCCCCEEE
Confidence            3557888889999987543      367778765321    2345667777777733   34555555443323578999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      +++.+++.
T Consensus        88 ~~~~~~~~   95 (280)
T cd05043          88 YPYMNWGN   95 (280)
T ss_pred             EEcCCCCc
Confidence            99998765

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.65  E-value=0.011  Score=52.40  Aligned_cols=74  Identities=16%  Similarity=0.173  Sum_probs=45.0

Q ss_pred             eeeCCcccceeEEEEeCC-c--------cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           57 CPVGGGCINLASRYGTDA-G--------SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~-~--------~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      +.+|.|..+.||++.... +        .+++|......   .+.+..|...++.+.+   -.+.+++..... .+..++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~l   76 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH---KHLVLNYGVCVC-GDESIM   76 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC---CChhheeeEEEe-CCCcEE
Confidence            357788889999986532 1        36666654321   2345566666666543   234445544332 357899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus        77 v~e~~~~g~L   86 (258)
T cd05078          77 VQEYVKFGSL   86 (258)
T ss_pred             EEecCCCCcH
Confidence            9999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=96.64  E-value=0.016  Score=52.86  Aligned_cols=74  Identities=9%  Similarity=-0.043  Sum_probs=45.1

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .++.++.|..+.+|++... ++ .+++|.....   .   ...+..|.+.++.+.+.   .+.+++..... ....+++|
T Consensus        19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~   94 (308)
T cd06634          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP---NTIQYRGCYLR-EHTAWLVM   94 (308)
T ss_pred             HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC---CcccEEEEEEc-CCeeEEEE
Confidence            3556777888899998763 33 6778876421   1   12345677777777542   23333333222 35789999


Q ss_pred             eeecCC
Q 020294          127 EFIEFG  132 (328)
Q Consensus       127 e~l~G~  132 (328)
                      ||+.|.
T Consensus        95 e~~~~~  100 (308)
T cd06634          95 EYCLGS  100 (308)
T ss_pred             EccCCC
Confidence            999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=96.64  E-value=0.0087  Score=57.73  Aligned_cols=92  Identities=16%  Similarity=0.031  Sum_probs=56.5

Q ss_pred             ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEe-CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCc
Q 020294           36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~V  108 (328)
                      +..+|++-+.-... .+|..-+.+|.|+...||--.- ..| .+.+|+-..     .+...++.|+++|+.+.+- |+..
T Consensus       550 s~~qiqe~vd~stv-YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HP-GiV~  627 (888)
T KOG4236|consen  550 SNCQIQENVDISTV-YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHP-GIVN  627 (888)
T ss_pred             cchhhhhhhhHHHH-HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCC-CeeE
Confidence            44455554421111 2566667789999999997443 334 667776532     3457789999999988652 2211


Q ss_pred             ccceeccccCCCceEEEEeeecCC
Q 020294          109 PRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus       109 P~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                        +--.-++ .++.|+|||.+.|.
T Consensus       628 --le~M~ET-~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  628 --LECMFET-PERVFVVMEKLHGD  648 (888)
T ss_pred             --EEEeecC-CceEEEEehhhcch
Confidence              1111122 46889999999986

>PHA02882 putative serine/threonine kinase; Provisional

Probab=96.60  E-value=0.022  Score=51.71  Aligned_cols=27  Identities=33%  Similarity=0.416  Sum_probs=24.1

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.|||+++++.+.|+||.
T Consensus       145 ~~iiHrDiKp~Nill~~~~~~~l~DFG  171 (294)
T PHA02882        145 HGISHGDIKPENIMVDGNNRGYIIDYG  171 (294)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence            469999999999999988878899985

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.58  E-value=0.029  Score=53.08  Aligned_cols=144  Identities=22%  Similarity=0.154  Sum_probs=84.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccce---eccccCC---CceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF---KVGALPT---GGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~---~~~~~~~---~~~~~v  125 (328)
                      +|.=++.||.|-...|||=.-..+.+.||++...+.....+|.++++..-    ++-+.++   +.|....   ..-|+|
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvm----LRHENILgFIaaD~~~~gs~TQLwLv  287 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVM----LRHENILGFIAADNKDNGSWTQLWLV  287 (513)
T ss_pred             eeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHH----hccchhhhhhhccccCCCceEEEEEe
Confidence            45567788999999999987777789999997644455668888887442    1222333   2332212   355888


Q ss_pred             EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294          126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  205 (328)
Q Consensus       126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  205 (328)
                      .+|=+-+.+       -+.|-+ +...                                   .+..++.+..        
T Consensus       288 TdYHe~GSL-------~DyL~r-~tv~-----------------------------------~~~ml~LalS--------  316 (513)
T KOG2052|consen  288 TDYHEHGSL-------YDYLNR-NTVT-----------------------------------TEGMLKLALS--------  316 (513)
T ss_pred             eecccCCcH-------HHHHhh-ccCC-----------------------------------HHHHHHHHHH--------
Confidence            888666532       111111 0000                                   0111111110        


Q ss_pred             HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                       ...-+.....+++.. +.+|.+-|+||++.|||+.+++...|=|..
T Consensus       317 -~AsGLaHLH~eI~GT-qgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  317 -IASGLAHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             -HhhhHHHHHHHHhcC-CCCchhhccccccccEEEccCCcEEEeece
Confidence             011122222334444 579999999999999999998877887753

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=96.57  E-value=0.023  Score=52.60  Aligned_cols=73  Identities=12%  Similarity=0.083  Sum_probs=44.8

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEee
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  128 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~  128 (328)
                      +.++.|....+|+....  +..+++|....     .....+..|+..++.+.++  -.+.+++...... ....+++||+
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKAENDKDIYLVFEY   90 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeeccCCCceEEEEecc
Confidence            44677777889998754  23788886532     1223456788888888443  2344444433221 2357999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      +++
T Consensus        91 ~~~   93 (337)
T cd07852          91 MET   93 (337)
T ss_pred             ccc
Confidence            875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.54  E-value=0.022  Score=56.96  Aligned_cols=27  Identities=26%  Similarity=0.328  Sum_probs=23.0

Q ss_pred             CceeccCCCCCCeeecCC-CCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKN-GEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~-~~~~iID~~  252 (328)
                      ..++|+|++|.|||++++ +...|+||.
T Consensus       274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG  301 (566)
T PLN03225        274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG  301 (566)
T ss_pred             CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence            479999999999999864 567899975

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=96.53  E-value=0.024  Score=60.28  Aligned_cols=74  Identities=19%  Similarity=0.218  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ...++.|....||+.... ++ .+++|...... .....|++.++.+.+   -.+.+++.+... .+..++||||++|+.
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~l~H---pnIv~~~~~~~~-~~~~~lv~Ey~~~g~  769 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGKLQH---PNIVKLIGLCRS-EKGAYLIHEYIEGKN  769 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhhCCC---CCcceEEEEEEc-CCCCEEEEeCCCCCc
Confidence            345788999999999863 34 78888765321 222356666666633   346666766543 457899999999975


Q ss_pred             C
Q 020294          134 S  134 (328)
Q Consensus       134 ~  134 (328)
                      +
T Consensus       770 L  770 (968)
T PLN00113        770 L  770 (968)
T ss_pred             H
Confidence            3

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=96.50  E-value=0.031  Score=48.05  Aligned_cols=65  Identities=14%  Similarity=0.039  Sum_probs=43.3

Q ss_pred             ceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           65 NLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        65 n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ..+|++...+  ..+++|......    ...+..|.+.++.+..   -.+++++..... ....++++|+++++.
T Consensus         3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~~   73 (244)
T smart00220        3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH---PNIVRLYDVFED-EDKLYLVMEYCDGGD   73 (244)
T ss_pred             eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC---CcHHHHHhheee-CCEEEEEEeCCCCCC
Confidence            4678877653  478999986432    3567788888877732   234555544332 367899999999874

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=96.50  E-value=0.023  Score=50.34  Aligned_cols=74  Identities=15%  Similarity=0.146  Sum_probs=43.9

Q ss_pred             eeeeeCCcccceeEEEEe-CCc-cEEEE-ecCCC---C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGT-DAG-SFFVK-TNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~-~~~-~~vlK-~~~~~---~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ..+.+|+|....||+-+. ..| .+.+| +....   + ....-+|+..|+.+.+.   .|-.++..-.. .+.--+|+|
T Consensus         6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~---nIi~LiD~F~~-~~~l~lVfE   81 (318)
T KOG0659|consen    6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHP---NIIELIDVFPH-KSNLSLVFE   81 (318)
T ss_pred             hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCc---chhhhhhhccC-CCceEEEEE
Confidence            356689999999999764 344 45554 33321   1 12234799888888753   23333332211 356688999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      |++-.
T Consensus        82 fm~td   86 (318)
T KOG0659|consen   82 FMPTD   86 (318)
T ss_pred             ecccc
Confidence            87763

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.49  E-value=0.058  Score=53.10  Aligned_cols=27  Identities=22%  Similarity=0.318  Sum_probs=24.1

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++|+|++|.||+++.++...|+|+.
T Consensus       328 ~~ivHrDLKp~NILl~~~~~~kL~DFG  354 (507)
T PLN03224        328 IGIVHRDIKPENLLVTVDGQVKIIDFG  354 (507)
T ss_pred             CCeecCCCchHhEEECCCCcEEEEeCc
Confidence            469999999999999988888999974

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=96.47  E-value=0.017  Score=52.22  Aligned_cols=148  Identities=18%  Similarity=0.226  Sum_probs=86.6

Q ss_pred             eeeeCCcccceeEEEEeC-CccE-EEEecC-CCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-AGSF-FVKTNR-SIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~~~-vlK~~~-~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +..+|+|....||+.... .|.. .+|.+- .++    ....-+|+++|+.|.+..-+..=.++..    ...-++|+||
T Consensus         7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr----krklhLVFE~   82 (396)
T KOG0593|consen    7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR----KRKLHLVFEY   82 (396)
T ss_pred             hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh----cceeEEEeee
Confidence            456889999999999864 4554 446553 221    1223479999998876422222223322    3578999999


Q ss_pred             ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294          129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  208 (328)
Q Consensus       129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  208 (328)
                      ++-.-           |-.|...+.     |.+               .        +.+..                .+
T Consensus        83 ~dhTv-----------L~eLe~~p~-----G~~---------------~--------~~vk~----------------~l  107 (396)
T KOG0593|consen   83 CDHTV-----------LHELERYPN-----GVP---------------S--------ELVKK----------------YL  107 (396)
T ss_pred             cchHH-----------HHHHHhccC-----CCC---------------H--------HHHHH----------------HH
Confidence            98752           222322221     211               0        11111                11


Q ss_pred             HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c----ccCCchhhhhhh-hh
Q 020294          209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C----YYGHNEAEFGMS-WC  267 (328)
Q Consensus       209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~----~~G~p~~DLa~~-~~  267 (328)
                      -+++..+. +.    ..-..||+|++|.|||+..++++.+.||. +    .-|+...|-..+ |+
T Consensus       108 ~Q~l~ai~-~c----Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY  167 (396)
T KOG0593|consen  108 YQLLKAIH-FC----HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWY  167 (396)
T ss_pred             HHHHHHhh-hh----hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence            11222211 11    23459999999999999999999999963 2    257777777654 54

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.47  E-value=0.018  Score=60.17  Aligned_cols=78  Identities=14%  Similarity=0.159  Sum_probs=43.6

Q ss_pred             eeeee-eCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeee
Q 020294           54 TKICP-VGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFI  129 (328)
Q Consensus        54 ~~v~~-i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l  129 (328)
                      ..|+. +|.|....||+.+..+| .++||+-.+...-.+-.=-+++..|..   -..|-+......-  .+..++|++|.
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~---~~~~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKP---QMLPSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             EEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhch---hhhcchHHHHHHHccCCcceeeeecc
Confidence            34544 58889999999998777 788999876432111111223333431   1122222221100  35679999998


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +-+.+
T Consensus       777 ~~Gtl  781 (974)
T KOG1166|consen  777 PYGTL  781 (974)
T ss_pred             ccccH
Confidence            76653

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=96.45  E-value=0.015  Score=53.90  Aligned_cols=73  Identities=15%  Similarity=0.161  Sum_probs=44.6

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~  124 (328)
                      ...++.|..+.+|++... + ..+++|.....     ....+..|...++.+.+.   .+.+++......    ....++
T Consensus        10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---ni~~~~~~~~~~~~~~~~~~~l   86 (337)
T cd07858          10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE---NVIAIKDIMPPPHREAFNDVYI   86 (337)
T ss_pred             EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC---CccchHHheecccccccCcEEE
Confidence            557888899999998754 2 37888876431     123345678777777432   233333322111    134799


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      ++||+.+
T Consensus        87 v~e~~~~   93 (337)
T cd07858          87 VYELMDT   93 (337)
T ss_pred             EEeCCCC
Confidence            9999865

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=96.42  E-value=0.025  Score=52.55  Aligned_cols=78  Identities=14%  Similarity=0.096  Sum_probs=44.2

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-C-CCceE
Q 020294           53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-P-TGGSY  123 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~-~~~~~  123 (328)
                      -..+..++.|..+.+|++....  ..+++|.....     ....+..|...++.+.+..-+++...+..+.. . ....+
T Consensus        17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07851          17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY   96 (343)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence            3446778889999999987643  37888876431     12334567777777643211112221211110 0 12478


Q ss_pred             EEEeeec
Q 020294          124 IIMEFIE  130 (328)
Q Consensus       124 ~v~e~l~  130 (328)
                      ++++++.
T Consensus        97 lv~e~~~  103 (343)
T cd07851          97 LVTHLMG  103 (343)
T ss_pred             EEEecCC
Confidence            9999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=96.34  E-value=0.066  Score=49.78  Aligned_cols=50  Identities=20%  Similarity=0.104  Sum_probs=33.6

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHh
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYE  102 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~  102 (328)
                      -.-++.++.|..+.+|++... ++ .+++|.....     ....+..|...++.+.+
T Consensus        19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h   75 (345)
T cd07877          19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH   75 (345)
T ss_pred             eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC
Confidence            344678888999999998653 34 7888876432     12345567877887754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=96.34  E-value=0.01  Score=55.44  Aligned_cols=71  Identities=24%  Similarity=0.286  Sum_probs=41.9

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEcccc--ccCCchhhhhhhhhcC-C--ChhhHHHHhhhCCCCCCHHHHHHHHHH
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEAEFGMSWCAG-F--GGSFYNSYFEVMPKQPGFEKRRDLYML  297 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~~--~~G~p~~DLa~~~~~~-~--~~~f~~~Y~~~~pl~~~~~~r~~ly~l  297 (328)
                      .-+++|+||+..|||+|.++...|-||..  .|.+.-  +-.++|+. +  .++.++|---..|--++|.--+-||.|
T Consensus       171 knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtL  246 (668)
T KOG0611|consen  171 KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTL  246 (668)
T ss_pred             hccceecccchhheeecCCCCeeeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHH
Confidence            55799999999999999998889999753  232221  22223422 1  234444433233434566555555544

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=96.32  E-value=0.059  Score=50.00  Aligned_cols=75  Identities=15%  Similarity=0.053  Sum_probs=45.1

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      ..+..++.|..+.+|+.... + ..+++|.....     ....+..|.++++.+.+.   .+.+++......     ...
T Consensus        18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE---NVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC---CccchhheecccccCCCCce
Confidence            34677888888999998753 3 47888876421     123356788888877542   233333322110     124


Q ss_pred             eEEEEeeecC
Q 020294          122 SYIIMEFIEF  131 (328)
Q Consensus       122 ~~~v~e~l~G  131 (328)
                      .+++++++.+
T Consensus        95 ~~lv~e~~~~  104 (342)
T cd07879          95 FYLVMPYMQT  104 (342)
T ss_pred             EEEEeccccc
Confidence            5889998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.28  E-value=0.0081  Score=50.31  Aligned_cols=75  Identities=19%  Similarity=0.127  Sum_probs=60.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      +.....++.|..+.+|...-..+..++|+.+.+. +..++.|+++|+-++..  -..|++|.++..     ++.|||++|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~--~~~p~vy~yg~~-----~i~me~i~G   96 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGE--GVTPEVYFYGED-----FIRMEYIDG   96 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhc--CCCceEEEechh-----hhhhhhhcC
Confidence            3345557788999999988777788999987653 56689999999999874  579999999854     777999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      .++
T Consensus        97 ~~L   99 (201)
T COG2112          97 RPL   99 (201)
T ss_pred             cch
Confidence            864

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=96.27  E-value=0.021  Score=55.97  Aligned_cols=136  Identities=18%  Similarity=0.149  Sum_probs=83.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ++.-.++||.|-..+|||-.-. |.+.||+..-.     ....|+.|+.+|+.-++.     =-++..|-.-.....||+
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~wh-GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~-----NIlLFMG~~~~p~~AIiT  466 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRWH-GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE-----NILLFMGACMNPPLAIIT  466 (678)
T ss_pred             Hhhccceeccccccceeecccc-cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh-----hheeeehhhcCCceeeee
Confidence            5666788999999999996432 56778876422     245577888887755432     223444432233449999


Q ss_pred             eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294          127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  206 (328)
Q Consensus       127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  206 (328)
                      .|++|..+          -..+|.....   |.                            +...+             +
T Consensus       467 qwCeGsSL----------Y~hlHv~etk---fd----------------------------m~~~i-------------d  492 (678)
T KOG0193|consen  467 QWCEGSSL----------YTHLHVQETK---FD----------------------------MNTTI-------------D  492 (678)
T ss_pred             hhccCchh----------hhhccchhhh---hh----------------------------HHHHH-------------H
Confidence            99999865          3344443321   11                            11111             1


Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..+++...+. +|-    ...+||.||++.||++++++.+.|=||.
T Consensus       493 IAqQiaqGM~-YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  493 IAQQIAQGMD-YLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             HHHHHHHhhh-hhh----hhhhhhhhccccceEEccCCcEEEeccc
Confidence            1122222222 332    3579999999999999988777888874

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.22  E-value=0.024  Score=56.18  Aligned_cols=72  Identities=17%  Similarity=0.190  Sum_probs=46.8

Q ss_pred             eCCcccceeEEEEe-CCc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           59 VGGGCINLASRYGT-DAG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        59 i~~G~~n~~y~v~~-~~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      +|.|.++.|=.-+. ..| ..++|+-+..      .+..+++|+.+++.|.+   -+|=++|.+... ...-|+|+||++
T Consensus        20 LG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H---pnVl~LydVwe~-~~~lylvlEyv~   95 (786)
T KOG0588|consen   20 LGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH---PNVLRLYDVWEN-KQHLYLVLEYVP   95 (786)
T ss_pred             ccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC---CCeeeeeeeecc-CceEEEEEEecC
Confidence            45566555433221 234 4567776532      25678999999999976   356667766543 357799999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        96 gGEL   99 (786)
T KOG0588|consen   96 GGEL   99 (786)
T ss_pred             Cchh
Confidence            9853

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=96.11  E-value=0.08  Score=49.13  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=48.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccC--------
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--------  118 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--------  118 (328)
                      .-.-+++++.|..+.+|+.... + ..+++|.....   ....+..|+++++.+.+.   .+.+++......        
T Consensus         6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHD---NIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCC---cchhhHhhhccccccccccc
Confidence            4555788999999999998763 3 37888876432   223466788888877432   344444321110        


Q ss_pred             -----CCceEEEEeeecC
Q 020294          119 -----TGGSYIIMEFIEF  131 (328)
Q Consensus       119 -----~~~~~~v~e~l~G  131 (328)
                           ....+++|||+++
T Consensus        83 ~~~~~~~~~~lv~e~~~~  100 (342)
T cd07854          83 GSLTELNSVYIVQEYMET  100 (342)
T ss_pred             ccccccceEEEEeecccc
Confidence                 1246899999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.04  E-value=0.12  Score=44.43  Aligned_cols=77  Identities=12%  Similarity=-0.009  Sum_probs=52.0

Q ss_pred             eeeeeeCCcccceeEEEEeCCccEEEEecCCCC-------------------cchHHHHHHHHHHHH-hc--CCCCcccc
Q 020294           54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------------------PSMFEGEALGLGAMY-ET--RTIRAPRP  111 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-------------------~~~~~~E~~~l~~L~-~~--~~v~VP~~  111 (328)
                      ....+++.|..-.+|.--. +...++|+..+..                   ......|..-+..+. ..  ...++|++
T Consensus         4 ~~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            3456677888777777532 3467888876543                   355677888777777 33  23478888


Q ss_pred             eeccccCCCceEEEEeeecCC
Q 020294          112 FKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus       112 ~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      +..-.+ +-...+|+|.+...
T Consensus        83 ~G~veT-~~G~Glv~e~I~d~  102 (199)
T PF10707_consen   83 YGFVET-NLGLGLVVELIRDA  102 (199)
T ss_pred             eEEEec-CCceEEEEEEEECC
Confidence            887766 45668888887654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=95.97  E-value=0.12  Score=45.75  Aligned_cols=74  Identities=15%  Similarity=0.086  Sum_probs=44.6

Q ss_pred             eeeCCcccceeEEEEeC----C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC--C---Cc
Q 020294           57 CPVGGGCINLASRYGTD----A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP--T---GG  121 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~----~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~---~~  121 (328)
                      +.++.|..+.+|++...    . ..+++|......     .+.+..|...++.+.+   -.+.+.+......  .   ..
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH---PNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC---CCcceEEEEEccCCCCCcccc
Confidence            35778888999998642    1 268888775421     2335567777776643   2355555543221  1   13


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .+++++|.+++.
T Consensus        82 ~~~~~~~~~~~~   93 (273)
T cd05074          82 PMVILPFMKHGD   93 (273)
T ss_pred             eEEEEecCCCCc
Confidence            467888888765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.95  E-value=0.045  Score=53.57  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=45.8

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      +..|+.|....|......  ...+.+|+.....     ...+.+|+++++.|.+-   .+-+++.+-.+ ...-|+||||
T Consensus        61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HP---nIvkl~~v~~t-~~~lylV~ey  136 (596)
T KOG0586|consen   61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHP---NIVKLFSVIET-EATLYLVMEY  136 (596)
T ss_pred             eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCc---ceeeeeeeeee-cceeEEEEEe
Confidence            345677777777766543  3488999876421     23356777777766431   23344444333 4578999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ..|+.
T Consensus       137 a~~ge  141 (596)
T KOG0586|consen  137 ASGGE  141 (596)
T ss_pred             ccCch
Confidence            99863

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=95.93  E-value=0.054  Score=47.75  Aligned_cols=74  Identities=15%  Similarity=-0.012  Sum_probs=42.9

Q ss_pred             eeeCCcccceeEEEEeCC--ccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           57 CPVGGGCINLASRYGTDA--GSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      +.++.|..+.+|++....  ..+.+|+....        ....+..|..+++.+.+   -.+++++..... ....++++
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   81 (260)
T cd08222           6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH---PAIVKFHASFLE-RDAFCIIT   81 (260)
T ss_pred             eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC---CcHHHHHHHHhc-CCceEEEE
Confidence            568888999999987543  23444443211        11224456666665533   234444443322 35689999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|..+
T Consensus        82 e~~~~~~l   89 (260)
T cd08222          82 EYCEGRDL   89 (260)
T ss_pred             EeCCCCCH
Confidence            99999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=95.88  E-value=0.04  Score=51.61  Aligned_cols=78  Identities=13%  Similarity=0.032  Sum_probs=49.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC----c-cEEEEec-CCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDA----G-SFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~----~-~~vlK~~-~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.-+.+||.|..+.||.-+.-.    + .+.+|.. .-..+..+..|.++|..+...  ..|-.+...-.. .+...+|
T Consensus        37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~--~ni~~~~~~~rn-nd~v~iv  113 (418)
T KOG1167|consen   37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS--DNIIKLNGCFRN-NDQVAIV  113 (418)
T ss_pred             hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc--hhhhcchhhhcc-CCeeEEE
Confidence            44567889999999999865422    2 3445544 334577888999999888654  222222222111 4678999


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      ++|++-.
T Consensus       114 lp~~~H~  120 (418)
T KOG1167|consen  114 LPYFEHD  120 (418)
T ss_pred             ecccCcc
Confidence            9987764

>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]

Probab=95.84  E-value=0.042  Score=50.42  Aligned_cols=38  Identities=16%  Similarity=0.148  Sum_probs=29.8

Q ss_pred             ceeccCCCCCCeeecCCCCeEEEccc--c--------ccCCchhhhhhh
Q 020294          227 CLLHGDLWSGNISSDKNGEPVILDPA--C--------YYGHNEAEFGMS  265 (328)
Q Consensus       227 ~LiHgDl~~~Nil~~~~~~~~iID~~--~--------~~G~p~~DLa~~  265 (328)
                      .=+|||||.+.||+.++ ...+|||+  .        .-.+|+-|++-+
T Consensus       285 ~RvHGDLHLgQVLvt~g-~~~liDFEGEPsRpl~err~~~sPlrDvAgl  332 (438)
T COG3281         285 QRVHGDLHLGQVLVTPG-RALLIDFEGEPSRPLDERRAPDSPLRDVAGL  332 (438)
T ss_pred             HHHhccceehheeeeCC-cEEEEecCCCCCCChhhccCCCCchHHHHHH
Confidence            45899999999999884 47899974  2        137899999843

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.78  E-value=0.13  Score=48.79  Aligned_cols=72  Identities=13%  Similarity=0.110  Sum_probs=46.3

Q ss_pred             eeeeCCcccceeEEEEe-CCc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccc-c-CCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGA-L-PTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~-~-~~~~~~~v~e  127 (328)
                      .+.||.|.+..||+-.+ +.+ .+-+|+..-    ...+.+++|...+..+.      -|.++.+.. + -+..-|+||.
T Consensus        31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEecceeEEeeh
Confidence            34578899999999776 334 444565431    22466778887776553      345554332 1 1457899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      ++.|+.
T Consensus       105 fMa~GS  110 (516)
T KOG0582|consen  105 FMAGGS  110 (516)
T ss_pred             hhcCCc
Confidence            999985

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.69  E-value=0.025  Score=51.88  Aligned_cols=37  Identities=24%  Similarity=0.334  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           91 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        91 ~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      ++|..-|..+... |+|||.|+...     .+++||.||....
T Consensus       333 EkEmhNL~RMq~~-GlpcP~vV~lk-----khvLVMsFiGd~~  369 (531)
T KOG2269|consen  333 EKEMHNLSRMQKH-GLPCPQVVKLK-----KHVLVMSFIGDQG  369 (531)
T ss_pred             HHHHHHHHHHHhc-CCCCCceeeee-----cceEEEEeecCCC
Confidence            4566666777776 89999999876     5699999987653

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=95.45  E-value=0.048  Score=53.27  Aligned_cols=132  Identities=15%  Similarity=0.130  Sum_probs=75.4

Q ss_pred             eeeeCCcccceeEEEEeCC-ccE-EEEecCCCCc-----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTDA-GSF-FVKTNRSIGP-----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~~~-vlK~~~~~~~-----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+-||.|....||+-+... ..+ .+|.-....+     .-++.|+++++.|.+-   .|-+.+..-++ ....|+|+||
T Consensus         7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHp---niv~m~esfEt-~~~~~vVte~   82 (808)
T KOG0597|consen    7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHP---NIVEMLESFET-SAHLWVVTEY   82 (808)
T ss_pred             HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCc---chhhHHHhhcc-cceEEEEehh
Confidence            3457899999999977543 333 3454433222     2377889888877542   22233322222 3567999999


Q ss_pred             ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294          129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  208 (328)
Q Consensus       129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  208 (328)
                      ..|.               +|.+...        +   |..|.              +.+                ++..
T Consensus        83 a~g~---------------L~~il~~--------d---~~lpE--------------e~v----------------~~~a  106 (808)
T KOG0597|consen   83 AVGD---------------LFTILEQ--------D---GKLPE--------------EQV----------------RAIA  106 (808)
T ss_pred             hhhh---------------HHHHHHh--------c---cCCCH--------------HHH----------------HHHH
Confidence            8772               3333321        0   11110              000                1122


Q ss_pred             HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..++..+-. +    ...+++|+|++|.|||+++++...+.||.
T Consensus       107 ~~LVsaL~y-L----hs~rilhrd~kPqniLl~~~~~~KlcdFg  145 (808)
T KOG0597|consen  107 YDLVSALYY-L----HSNRILHRDMKPQNILLEKGGTLKLCDFG  145 (808)
T ss_pred             HHHHHHHHH-H----HhcCcccccCCcceeeecCCCceeechhh
Confidence            223333332 2    24589999999999999998888899963

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=95.42  E-value=0.042  Score=53.81  Aligned_cols=81  Identities=16%  Similarity=0.096  Sum_probs=59.8

Q ss_pred             CCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           49 KATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        49 ~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      +...+.=+++||+|....+-...+..+ ...+|+-+++    .+..|.+|+++|..|++   -.|-+++.++.. ++...
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh---PNIveLvGVC~~-DePic  611 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH---PNIVELLGVCVQ-DDPLC  611 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC---CCeeEEEeeeec-CCchH
Confidence            334566688999999999999998875 6777887653    24668889998888832   356677776543 45678


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +|+||.+-+.
T Consensus       612 mI~EYmEnGD  621 (807)
T KOG1094|consen  612 MITEYMENGD  621 (807)
T ss_pred             HHHHHHhcCc
Confidence            9999988764

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=95.31  E-value=0.18  Score=49.56  Aligned_cols=150  Identities=13%  Similarity=0.090  Sum_probs=85.4

Q ss_pred             eeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           53 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      -+.++++|.|....|.......+  .+|+|.-...           ....+-.|+++|..|.++..-.+-+++..-++ +
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd-d  641 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED-D  641 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-C
Confidence            35688899999999988776544  5677876431           11234579999999986532234444443332 4


Q ss_pred             CceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHHHhh
Q 020294          120 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLALDQ  198 (328)
Q Consensus       120 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~~~~  198 (328)
                      +..|++||- .|..+     +|                |.                      |+. +.++.+        
T Consensus       642 d~yyl~te~-hg~gI-----DL----------------Fd----------------------~IE~kp~m~E--------  669 (772)
T KOG1152|consen  642 DYYYLETEV-HGEGI-----DL----------------FD----------------------FIEFKPRMDE--------  669 (772)
T ss_pred             CeeEEEecC-CCCCc-----ch----------------hh----------------------hhhccCccch--------
Confidence            677777762 33211     00                11                      110 001110        


Q ss_pred             CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc--cccCCchhhhh
Q 020294          199 YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEAEFG  263 (328)
Q Consensus       199 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~--~~~G~p~~DLa  263 (328)
                         .+.+....++....++     -....++|+|++-.||+++.+|-..+|||.  +..-..-+|+-
T Consensus       670 ---~eAk~IFkQV~agi~h-----lh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f  728 (772)
T KOG1152|consen  670 ---PEAKLIFKQVVAGIKH-----LHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVF  728 (772)
T ss_pred             ---HHHHHHHHHHHhcccc-----ccccCceecccccccEEEecCCeEEEeeccchhhhcCCCccee
Confidence               0001122233332222     235689999999999999999988999984  33444445654

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.05  E-value=0.2  Score=49.84  Aligned_cols=134  Identities=17%  Similarity=0.180  Sum_probs=80.3

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      +.-+|-|....|+.....  +.-|.+|.-..      ++.+....|.+++....++ ++ .-.++..-.+ ...-|+|||
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-PF-L~~L~~~fQT-~~~l~fvme  449 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-PF-LVNLFSCFQT-KEHLFFVME  449 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-Ce-Eeeccccccc-CCeEEEEEE
Confidence            455688999999998864  33677787653      2345566788888777643 22 1122222122 467899999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |+.|+..             +|.....  .|.                 ..-.-||++                      
T Consensus       450 y~~Ggdm-------------~~~~~~~--~F~-----------------e~rarfyaA----------------------  475 (694)
T KOG0694|consen  450 YVAGGDL-------------MHHIHTD--VFS-----------------EPRARFYAA----------------------  475 (694)
T ss_pred             ecCCCcE-------------EEEEecc--ccc-----------------HHHHHHHHH----------------------
Confidence            9999842             2222210  111                 000112221                      


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                        +++-.+. +|    ....+|++||+.+|||.|.+|-..|.|+..
T Consensus       476 --ev~l~L~-fL----H~~~IIYRDlKLdNiLLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  476 --EVVLGLQ-FL----HENGIIYRDLKLDNLLLDTEGHVKIADFGL  514 (694)
T ss_pred             --HHHHHHH-HH----HhcCceeeecchhheEEcccCcEEeccccc
Confidence              1222222 22    245799999999999999999889999853

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=94.88  E-value=0.065  Score=52.41  Aligned_cols=72  Identities=19%  Similarity=0.219  Sum_probs=49.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeee
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFI  129 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l  129 (328)
                      +|.+++.+|.|....||+=+..+..+.||.-+    +.-+.++   ++|++   +.-|.++.+....  ..-.+|||||+
T Consensus       125 ~IsELeWlGSGaQGAVF~Grl~netVAVKKV~----elkETdI---KHLRk---LkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  125 EISELEWLGSGAQGAVFLGRLHNETVAVKKVR----ELKETDI---KHLRK---LKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             HhhhhhhhccCcccceeeeeccCceehhHHHh----hhhhhhH---HHHHh---ccCcceeeEeeeecCCceeEEeeecc
Confidence            78889999999999999988888877777643    2222334   45543   3456677654321  34568999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +-+.
T Consensus       195 a~Gq  198 (904)
T KOG4721|consen  195 AQGQ  198 (904)
T ss_pred             cccc
Confidence            8764

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=94.83  E-value=0.052  Score=47.75  Aligned_cols=30  Identities=33%  Similarity=0.490  Sum_probs=26.3

Q ss_pred             CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                      ..+...|+|++|+||++.+.+.++++|+.+
T Consensus       146 ~~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen  146 KEPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             cCCcccccCCCcceeEecCCCceEEEeccC
Confidence            456899999999999999888899999753

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.38  E-value=0.024  Score=55.96  Aligned_cols=28  Identities=29%  Similarity=0.395  Sum_probs=23.9

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ...+||+||+.||||++-+|...+-||+
T Consensus       148 s~~iIHRDLKAGNiL~TldGdirLADFG  175 (1187)
T KOG0579|consen  148 SQNIIHRDLKAGNILLTLDGDIRLADFG  175 (1187)
T ss_pred             hcchhhhhccccceEEEecCcEeeeccc
Confidence            3479999999999999988877787864

>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain

Probab=93.98  E-value=0.15  Score=44.52  Aligned_cols=73  Identities=14%  Similarity=0.096  Sum_probs=48.8

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccc--cC---------------
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP---------------  118 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~--~~---------------  118 (328)
                      +...++|..-.+..+.++++.+|+|..+..     ..|.-. ..|+...++|+|..--...  ..               
T Consensus         4 ~i~~s~s~~~~~~F~~s~~~a~ViK~s~ti-----~~E~~~-~~La~~LgVpiPq~rvi~~~~~E~~e~~~~L~~a~~~~   77 (238)
T cd05124           4 AIDLSDSGVFGALFVESESGAIVVKSSPNI-----ASEYFL-SKLAKILGLPIPQMRVLEWNSSEFTEMSENLLKASSED   77 (238)
T ss_pred             EEEecCCceEEEEEEcCCCcEEEEEcCccH-----HHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHHHHHHHHhcc
Confidence            344566776777788888899999998643     344432 4456666889887553222  10               


Q ss_pred             -----------CCceEEEEeeecCCCC
Q 020294          119 -----------TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 -----------~~~~~~v~e~l~G~~~  134 (328)
                                 ....+++|||++|.++
T Consensus        78 ~~~~~~i~~el~~~~flimeYv~G~~l  104 (238)
T cd05124          78 ECLERRITLELEKAYLLIMEYVPGITL  104 (238)
T ss_pred             hhHHHHHHHHHhhhheeeeeecCCccc
Confidence                       1237999999999976

The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=93.95  E-value=0.22  Score=41.83  Aligned_cols=73  Identities=18%  Similarity=0.084  Sum_probs=44.5

Q ss_pred             eeeeeCCcccceeEEEEeCC-cc-EEEEecCC---C--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA-GS-FFVKTNRS---I--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~~-~vlK~~~~---~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      +.+.||+|...+||+-...+ +. ..+|.-+-   +  -+...-+|+.+|+.|.+..   +-+++..-.. +..-.+|+|
T Consensus         6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkn---ivrl~dvlhs-dkkltlvfe   81 (292)
T KOG0662|consen    6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN---IVRLHDVLHS-DKKLTLVFE   81 (292)
T ss_pred             HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcc---eeehhhhhcc-CceeEEeHH
Confidence            56789999999999987643 33 34455432   1  1344558999999998753   3333332211 345566777


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |++-
T Consensus        82 ~cdq   85 (292)
T KOG0662|consen   82 FCDQ   85 (292)
T ss_pred             HhhH
Confidence            6543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=93.91  E-value=0.034  Score=51.24  Aligned_cols=49  Identities=8%  Similarity=0.005  Sum_probs=34.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHH
Q 020294           52 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMY  101 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~  101 (328)
                      .+...+.+|.|..+.||+....  ++.+.+|.--++. ..-.+|.++|+.+.
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~knrEl~im~~l~   75 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYKNRELQIMRKLD   75 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcCcHHHHHHHhcC
Confidence            4566778899999999997653  4588888765432 23347888888543

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=93.64  E-value=0.36  Score=46.13  Aligned_cols=72  Identities=21%  Similarity=0.143  Sum_probs=45.6

Q ss_pred             eeeeCCcccceeEEEEe--CCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCc-eEEE
Q 020294           56 ICPVGGGCINLASRYGT--DAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGG-SYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~-~~~v  125 (328)
                      ++.+|.|....++.+.-  ++..||+|.-.-.     .+.....|..+++.      +.-|-++.+....  ++. -+|+
T Consensus         9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~------~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK------LLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh------ccCCCeeeeccchhcCCceEEEE
Confidence            45577788777776654  3458999976521     12223445554443      4567777665432  455 8999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |+|++|+.
T Consensus        83 m~Y~eGg~   90 (426)
T KOG0589|consen   83 MEYCEGGD   90 (426)
T ss_pred             EeecCCCC
Confidence            99999985

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=93.51  E-value=0.044  Score=47.01  Aligned_cols=28  Identities=25%  Similarity=0.327  Sum_probs=25.7

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ...+||+|.+|+|||++.+|++.|.||.
T Consensus       167 kL~vIHRDvKPsNiLIn~~GqVKiCDFG  194 (282)
T KOG0984|consen  167 KLSVIHRDVKPSNILINYDGQVKICDFG  194 (282)
T ss_pred             HhhhhhccCCcceEEEccCCcEEEcccc
Confidence            4579999999999999999999999986

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=93.44  E-value=0.32  Score=44.36  Aligned_cols=73  Identities=14%  Similarity=0.191  Sum_probs=47.6

Q ss_pred             eeeeCCcccceeEEEE-eCC-c----cEEEEecCCC----C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYG-TDA-G----SFFVKTNRSI----G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~-~~~-~----~~vlK~~~~~----~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      +..|+.|....||+.. .+. +    .|.+|.....    + .....+|...++.|.+..-+..-+|+-..   +...++
T Consensus        29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---d~~v~l  105 (438)
T KOG0666|consen   29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---DKKVWL  105 (438)
T ss_pred             cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---CceEEE
Confidence            4458899999999973 322 1    4667766432    1 23345899999999875334444444432   468899


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +++|.+-
T Consensus       106 ~fdYAEh  112 (438)
T KOG0666|consen  106 LFDYAEH  112 (438)
T ss_pred             Eehhhhh
Confidence            9999765

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=93.23  E-value=0.13  Score=45.01  Aligned_cols=29  Identities=24%  Similarity=0.212  Sum_probs=24.5

Q ss_pred             CCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          224 VEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ..+.+||+|++|.|+|.+.++..-|=||.
T Consensus       141 h~k~VIhRdiKpenlLlg~~~~lkiAdfG  169 (281)
T KOG0580|consen  141 HLKRVIHRDIKPENLLLGSAGELKIADFG  169 (281)
T ss_pred             ccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence            35689999999999999988877787754

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=92.91  E-value=0.39  Score=47.75  Aligned_cols=74  Identities=22%  Similarity=0.147  Sum_probs=45.2

Q ss_pred             eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      -..+|||+...||.=.-..  =.+.||.-..+  ..+.|-+|+++++.+.+-   ..-+++.++.. +...|||+||+.-
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHp---NLVqLLGVCT~-EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP---NLVQLLGVCTH-EPPFYIITEFMCY  347 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCc---cHHHHhhhhcc-CCCeEEEEecccC
Confidence            4457888888888632111  02233333222  235577899998888652   34556666654 5678999999876


Q ss_pred             CC
Q 020294          132 GS  133 (328)
Q Consensus       132 ~~  133 (328)
                      +.
T Consensus       348 GN  349 (1157)
T KOG4278|consen  348 GN  349 (1157)
T ss_pred             cc
Confidence            64

>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes

Probab=92.84  E-value=0.49  Score=42.43  Aligned_cols=77  Identities=12%  Similarity=0.116  Sum_probs=39.9

Q ss_pred             ceeeeeeeCCc-ccceeEEEEeCCc----cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCccccee--cccc-------
Q 020294           52 HITKICPVGGG-CINLASRYGTDAG----SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK--VGAL-------  117 (328)
Q Consensus        52 ~i~~v~~i~~G-~~n~~y~v~~~~~----~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~--~~~~-------  117 (328)
                      .+.+++...+| .++-+|.+.+.++    .+|+|..+.     +..|.- ...|+...++|+|..--  ....       
T Consensus        26 ~l~sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t-----~~~E~~-~s~La~~Lgv~~P~~Rii~~~~~E~~e~~~   99 (275)
T PF09192_consen   26 SLSSVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST-----IQQEVF-ASELARWLGVPTPQMRIIESSSSEFQEMSE   99 (275)
T ss_dssp             -CCCEEEEEE-STTS-EEEEEETTE----EEEEE--TT-----HHHHHH-HHHHHHHCT-----EEEEESSSHHHHHHHH
T ss_pred             HhhhHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc-----hHHHHH-HHHHHHHhCCCCCceeeeecCCHHHHHHHH
Confidence            56677777766 2445777777766    899999864     445544 34566667888887543  2210       


Q ss_pred             ---------C----------CCceEEEEeeecCCCC
Q 020294          118 ---------P----------TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       118 ---------~----------~~~~~~v~e~l~G~~~  134 (328)
                               +          +...+++|||++|.++
T Consensus       100 ~l~~a~~~~~~l~~~i~~el~~a~~liMeyv~G~~L  135 (275)
T PF09192_consen  100 ALLFATSNDDELGDFICSELDKAFFLIMEYVPGKPL  135 (275)
T ss_dssp             HHH----HH-SSS-HHHHHCT-SEEEEEE---EEES
T ss_pred             HHHhhcccchHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence                     0          2356899999999775

It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=92.53  E-value=0.17  Score=49.99  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec-CCCCeEEEccc
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDPA  252 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~-~~~~~~iID~~  252 (328)
                      +..++...+..+     ...+++|+||+|+|||++ +.+..-|+||.
T Consensus       420 w~~~lv~Av~~L-----H~~gvvhRDLkp~NIL~~~~~g~lrltyFG  461 (612)
T KOG0603|consen  420 WAAELVSAVDYL-----HEQGVVHRDLKPGNILLDGSAGHLRLTYFG  461 (612)
T ss_pred             HHHHHHHHHHHH-----HhcCeeecCCChhheeecCCCCcEEEEEec
Confidence            444555444433     236899999999999994 55667899963

>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function

Probab=92.38  E-value=0.17  Score=47.96  Aligned_cols=60  Identities=20%  Similarity=0.241  Sum_probs=44.1

Q ss_pred             CCCCceeccCCCCCCeeecCCC-CeEEEc---c-ccccCCchhhhhhhh----h----cCCC--------hhhHHHHhhh
Q 020294          223 NVEPCLLHGDLWSGNISSDKNG-EPVILD---P-ACYYGHNEAEFGMSW----C----AGFG--------GSFYNSYFEV  281 (328)
Q Consensus       223 ~~~~~LiHgDl~~~Nil~~~~~-~~~iID---~-~~~~G~p~~DLa~~~----~----~~~~--------~~f~~~Y~~~  281 (328)
                      ..++++|+||+|.+|.=.-.+. ...++|   | +++.|+++|||-.+.    .    .+++        ..|.++|.+.
T Consensus        40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~~  119 (385)
T PF10009_consen   40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYREA  119 (385)
T ss_pred             CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999775442 245666   6 589999999998542    1    3454        3688999766


Q ss_pred             C
Q 020294          282 M  282 (328)
Q Consensus       282 ~  282 (328)
                      .
T Consensus       120 l  120 (385)
T PF10009_consen  120 L  120 (385)
T ss_pred             H
Confidence            4

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=91.92  E-value=0.053  Score=52.44  Aligned_cols=29  Identities=21%  Similarity=0.196  Sum_probs=24.1

Q ss_pred             CCceeccCCCCCCeeecCCC-CeEEEcccc
Q 020294          225 EPCLLHGDLWSGNISSDKNG-EPVILDPAC  253 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~-~~~iID~~~  253 (328)
                      ...++|.|++|+|||+.++. .+.|+||..
T Consensus       554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS  583 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILVNESKNILKLCDFGS  583 (752)
T ss_pred             hcCeeecccCccceEeccCcceeeeccCcc
Confidence            56899999999999998765 368999853

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=91.67  E-value=0.18  Score=45.17  Aligned_cols=39  Identities=28%  Similarity=0.221  Sum_probs=30.8

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc-cc---cCCchhhhh
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGHNEAEFG  263 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~---~G~p~~DLa  263 (328)
                      ...++|+||+|.|||++++....|-||. ++   -|....||-
T Consensus       141 a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelC  183 (411)
T KOG0599|consen  141 ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELC  183 (411)
T ss_pred             HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhc
Confidence            3479999999999999998888999963 33   466666664

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.36  E-value=0.21  Score=44.60  Aligned_cols=28  Identities=29%  Similarity=0.311  Sum_probs=24.9

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ...++|+|++|||+|++.|.+..|.||.
T Consensus       174 sA~ILHRDIKPGNLLVNSNCvLKICDFG  201 (449)
T KOG0664|consen  174 TANILHRDIKPGNLLVNSNCILKICDFG  201 (449)
T ss_pred             hcchhhccCCCccEEeccCceEEecccc
Confidence            4579999999999999988888999975

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.10  E-value=2.6  Score=42.84  Aligned_cols=71  Identities=17%  Similarity=0.079  Sum_probs=45.0

Q ss_pred             eCCcccceeEEEEeCCc--cEEEEecCC-C--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeecCC
Q 020294           59 VGGGCINLASRYGTDAG--SFFVKTNRS-I--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFG  132 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~~--~~vlK~~~~-~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~  132 (328)
                      +|.|....||--+.-+.  +.++|--+. .  ...-+-.|++..+.|.+..   +-+-+  |... +|..-|-||.++|+
T Consensus       583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkN---IVrYL--Gs~senGf~kIFMEqVPGG  657 (1226)
T KOG4279|consen  583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKN---IVRYL--GSVSENGFFKIFMEQVPGG  657 (1226)
T ss_pred             eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHh---HHHHh--hccCCCCeEEEEeecCCCC
Confidence            57788888888765332  667775542 1  1234668899888887642   22222  2222 46667889999998


Q ss_pred             CC
Q 020294          133 SS  134 (328)
Q Consensus       133 ~~  134 (328)
                      .+
T Consensus       658 SL  659 (1226)
T KOG4279|consen  658 SL  659 (1226)
T ss_pred             cH
Confidence            63

>PF13575 DUF4135: Domain of unknown function (DUF4135)

Probab=90.77  E-value=3.4  Score=39.01  Aligned_cols=74  Identities=22%  Similarity=0.197  Sum_probs=41.8

Q ss_pred             ceeeeee-eCCccc--ceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcC-----CCCcccceeccccCCCce
Q 020294           52 HITKICP-VGGGCI--NLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETR-----TIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~-i~~G~~--n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~-----~v~VP~~~~~~~~~~~~~  122 (328)
                      .+++|+. .|.-..  ..|-+++.++| ++|-|--+-.....+   .+++++|.+..     .+|+|+++..+.     .
T Consensus        44 ~i~~I~~~~GD~H~~Gr~V~~l~f~~g~kivYKPRsl~~d~~f---~~l~~~ln~~~~~~~~~l~~~~~l~~g~-----~  115 (370)
T PF13575_consen   44 KITSIEFGLGDTHNGGRSVAILEFSSGKKIVYKPRSLSIDKAF---NDLLEWLNEKNGTPSLDLPTPKVLDRGD-----G  115 (370)
T ss_pred             CceEecCCCCCcCCCCceEEEEEECCCCEEEEeCcccHHHHHH---HHHHHHHhhhccccccccccceeeeccC-----c
Confidence            5666654 222222  37888888887 777775432222222   45567776653     245556665432     3


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      |--+|||+-.+
T Consensus       116 YgW~EfI~~~~  126 (370)
T PF13575_consen  116 YGWQEFIEHEP  126 (370)
T ss_pred             ceeEEEecCCC
Confidence            66678877654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.48  E-value=0.88  Score=46.47  Aligned_cols=78  Identities=17%  Similarity=0.115  Sum_probs=54.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-------cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-------SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-------~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+.-.+.+|.|....||.-...+.       -+.||.-...    ....|++|++++..|.+.   .|-+++.+... +.
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~---nIVrLlGVC~~-~~  562 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHP---NIVRLLGVCRE-GD  562 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCC---CeEEEEEEEcc-CC
Confidence            445567789999999998765421       2344554332    245689999988888653   57788887764 45


Q ss_pred             ceEEEEeeecCCC
Q 020294          121 GSYIIMEFIEFGS  133 (328)
Q Consensus       121 ~~~~v~e~l~G~~  133 (328)
                      ..++|+||+.-++
T Consensus       563 P~~MvFEYm~~GD  575 (774)
T KOG1026|consen  563 PLCMVFEYMDHGD  575 (774)
T ss_pred             eeEEEEEeccccc
Confidence            6799999998764

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=90.32  E-value=0.21  Score=44.76  Aligned_cols=28  Identities=25%  Similarity=0.325  Sum_probs=24.3

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      .-+++|+|.+|.|||+|+.|+..+.||.
T Consensus       210 KH~viHRDvKPSNILlDe~GniKlCDFG  237 (391)
T KOG0983|consen  210 KHGVIHRDVKPSNILLDERGNIKLCDFG  237 (391)
T ss_pred             hcceeecccCccceEEccCCCEEeeccc
Confidence            5589999999999999998887787764

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=90.15  E-value=0.21  Score=43.57  Aligned_cols=30  Identities=40%  Similarity=0.583  Sum_probs=26.6

Q ss_pred             CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                      .....+|||..|+|||.|+.|-..++||.+
T Consensus       160 ~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  160 ENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             cCCCeecCCCChhheeecCCCCEEecChhh
Confidence            467899999999999999999889999753

The function of this family is unknown.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=90.12  E-value=1.3  Score=43.90  Aligned_cols=81  Identities=25%  Similarity=0.356  Sum_probs=46.6

Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccccccCCchhhhhhhhh-----c-C-C-ChhhH--
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPACYYGHNEAEFGMSWC-----A-G-F-GGSFY--  275 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~~~~G~p~~DLa~~~~-----~-~-~-~~~f~--  275 (328)
                      |-.++++.+. ++.  ...|.+||+||+.+||++..+ |.+.|=|           |+.+..     + . . +++|+  
T Consensus       148 W~RQILkGL~-yLH--s~~PPIIHRDLKCDNIFinG~~G~VKIGD-----------LGLAtl~r~s~aksvIGTPEFMAP  213 (632)
T KOG0584|consen  148 WCRQILKGLV-YLH--SQDPPIIHRDLKCDNIFVNGNLGEVKIGD-----------LGLATLLRKSHAKSVIGTPEFMAP  213 (632)
T ss_pred             HHHHHHHHhh-hhh--cCCCCccccccccceEEEcCCcCceeecc-----------hhHHHHhhccccceeccCccccCh
Confidence            3344444444 333  246789999999999999765 4455644           433211     1 1 1 23454  


Q ss_pred             HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 020294          276 NSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF  307 (328)
Q Consensus       276 ~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~  307 (328)
                      |-|++      ++-+.+++|.+.+=+..+.++
T Consensus       214 EmYEE------~YnE~VDVYaFGMCmLEMvT~  239 (632)
T KOG0584|consen  214 EMYEE------NYNELVDVYAFGMCMLEMVTS  239 (632)
T ss_pred             HHHhh------hcchhhhhhhhhHHHHHHHhc
Confidence            55653      344678889877554445554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=89.54  E-value=2.1  Score=39.65  Aligned_cols=66  Identities=12%  Similarity=0.151  Sum_probs=43.3

Q ss_pred             eeCCcccceeEEEEe--CCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC-ceEEEEe
Q 020294           58 PVGGGCINLASRYGT--DAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIME  127 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~-~~~~v~e  127 (328)
                      .||.|.....|.=+.  .+..+.+|+-+.. ....+.-|.+.++.|...  .-+|.+|+++..  | .-.+|++
T Consensus        35 KIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~--~GIP~vYYFGqe--G~~NiLVid  104 (449)
T KOG1165|consen   35 KIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGT--EGIPQVYYFGQE--GKYNILVID  104 (449)
T ss_pred             ccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCC--CCCCceeeeccc--cchhhhhhh
Confidence            466666554443221  2346778887743 346688999999999864  568999999874  3 3345555

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=89.00  E-value=2.2  Score=41.59  Aligned_cols=74  Identities=22%  Similarity=0.184  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEe--CCc----cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGT--DAG----SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~--~~~----~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...+|.|....||+=+.  .++    ...+|.....      ....+..|+++++.|.+   ..|-+.|.+... ....+
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~-~~Pl~  237 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVL-EEPLM  237 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCccE
Confidence            36789999999998544  322    2455655421      13446689998888654   467788876543 45679


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +|||.+.|+.
T Consensus       238 ivmEl~~gGs  247 (474)
T KOG0194|consen  238 LVMELCNGGS  247 (474)
T ss_pred             EEEEecCCCc
Confidence            9999999984

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=89.00  E-value=0.22  Score=52.88  Aligned_cols=50  Identities=14%  Similarity=0.119  Sum_probs=34.6

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHh
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYE  102 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~  102 (328)
                      ...++.+|.|....||+|+.. || .|.+|.-+-. +   ...+.+|+..|..|.+
T Consensus       481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH  536 (1351)
T KOG1035|consen  481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH  536 (1351)
T ss_pred             hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC
Confidence            345677899999999999864 44 7888765421 1   2346678888877754

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=88.45  E-value=0.72  Score=49.52  Aligned_cols=29  Identities=31%  Similarity=0.228  Sum_probs=25.2

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                      .-+++|+|+++.||+.+.+|.....||++
T Consensus      1352 ~~gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred             hcCceecCCCccceeeecCCcEEeecccc
Confidence            34899999999999999999778899853

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=88.09  E-value=6.2  Score=42.00  Aligned_cols=79  Identities=23%  Similarity=0.237  Sum_probs=49.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--Ccc-----EEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD--AGS-----FFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--~~~-----~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+.-...+|.|....||+-+..  +++     +-+|.-...    ....|-.|+.+++.+.+.   .|-+++...-. .+
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~Hp---Niv~liGv~l~-~~  768 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHP---NIVSLIGVCLD-SG  768 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCc---ceeeEEEeecC-CC
Confidence            4455677899999999997653  332     333332221    124455666666555432   35556666544 67


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      .+++++||++|+++
T Consensus       769 ~~~i~leyM~gGDL  782 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDL  782 (1025)
T ss_pred             CcEEEehhcccCcH
Confidence            88999999999864

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=87.77  E-value=0.54  Score=44.38  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=25.4

Q ss_pred             CCceeccCCCCCCeeec--CCCCe--EEEccccccCCc
Q 020294          225 EPCLLHGDLWSGNISSD--KNGEP--VILDPACYYGHN  258 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~--~~~~~--~iID~~~~~G~p  258 (328)
                      .-.+-|+|++++|||+.  +|+.+  +|-||.||..|-
T Consensus       359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~  396 (598)
T KOG4158|consen  359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD  396 (598)
T ss_pred             HccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence            44799999999999995  45544  677888776543

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=87.75  E-value=0.32  Score=43.46  Aligned_cols=27  Identities=26%  Similarity=0.372  Sum_probs=24.2

Q ss_pred             CceeccCCCCCCeeecCCCCeEEEccc
Q 020294          226 PCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       226 ~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      .-+||+|.+|.|||++..|.+.+.||.
T Consensus       187 lkiIHRDvKPSNILldr~G~vKLCDFG  213 (361)
T KOG1006|consen  187 LKIIHRDVKPSNILLDRHGDVKLCDFG  213 (361)
T ss_pred             hhhhhccCChhheEEecCCCEeeeccc
Confidence            468999999999999998888899976

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=87.49  E-value=0.32  Score=44.89  Aligned_cols=28  Identities=21%  Similarity=0.255  Sum_probs=25.3

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ...++|+||+|.|++++.+....|.||.
T Consensus       143 SAnViHRDLKPsNll~n~~c~lKI~DFG  170 (359)
T KOG0660|consen  143 SANVIHRDLKPSNLLLNADCDLKICDFG  170 (359)
T ss_pred             cccccccccchhheeeccCCCEEecccc
Confidence            4579999999999999998888999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=87.34  E-value=0.78  Score=47.89  Aligned_cols=28  Identities=4%  Similarity=0.050  Sum_probs=23.2

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      ...++|+|++|.|||+++.+...++|+.
T Consensus        98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~~  125 (793)
T PLN00181         98 SQGIVVHNVRPSCFVMSSFNHVSFIESA  125 (793)
T ss_pred             hCCeeeccCCchhEEEcccCcEEEeecc
Confidence            3579999999999999876667788763

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=86.69  E-value=3  Score=44.46  Aligned_cols=44  Identities=14%  Similarity=0.125  Sum_probs=32.6

Q ss_pred             HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCC
Q 020294           39 PIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS   84 (328)
Q Consensus        39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~   84 (328)
                      +++.++... .. ++.-++.+|.+-.=.+.|..+++|-+|+|.+-.
T Consensus        13 ~~e~yfsd~-~~-e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk   56 (1431)
T KOG1240|consen   13 PVEVYFSDL-SV-ECHYVENLGSTRFLKVARAKDREGLVVVKVFVK   56 (1431)
T ss_pred             hHHHHhhcC-cc-ceeeecccCchhhhhhhhccCCCceEEEEEEec
Confidence            456677655 22 677777788777778888888999899998853

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=85.93  E-value=0.6  Score=47.07  Aligned_cols=137  Identities=22%  Similarity=0.206  Sum_probs=80.4

Q ss_pred             eeeeeeeCCcccceeEEEE--eCCc---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           53 ITKICPVGGGCINLASRYG--TDAG---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~--~~~~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      |.-.+.+|.|....|.|-+  ..+|   .+.||.-+.+    ..+.|.+|+..+-.|.+.   .+-++|...-+  ...-
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~---hliRLyGvVl~--qp~m  186 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP---HLIRLYGVVLD--QPAM  186 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc---ceeEEeeeecc--chhh
Confidence            3345667889988888854  3344   5677876643    245677888887777542   35555554321  2233


Q ss_pred             EEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH
Q 020294          124 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST  203 (328)
Q Consensus       124 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~  203 (328)
                      +|+|-.+          +|..|.+||+.....  |                        .. .++-              
T Consensus       187 MV~ELap----------lGSLldrLrka~~~~--l------------------------lv-~~Lc--------------  215 (1039)
T KOG0199|consen  187 MVFELAP----------LGSLLDRLRKAKKAI--L------------------------LV-SRLC--------------  215 (1039)
T ss_pred             HHhhhcc----------cchHHHHHhhccccc--e------------------------eH-HHHH--------------
Confidence            4445444          456699999944310  1                        00 0111              


Q ss_pred             HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                        +...++...+. +|+    ...|||+||-..|+++-....+.|-||.
T Consensus       216 --dya~QiA~aM~-YLe----skrlvHRDLAARNlllasprtVKI~DFG  257 (1039)
T KOG0199|consen  216 --DYAMQIAKAMQ-YLE----SKRLVHRDLAARNLLLASPRTVKICDFG  257 (1039)
T ss_pred             --HHHHHHHHHHH-HHh----hhhhhhhhhhhhhheecccceeeeeccc
Confidence              11112222222 343    3589999999999999876667899985

>PHA00451 protein kinase

Probab=85.15  E-value=0.68  Score=41.19  Aligned_cols=29  Identities=41%  Similarity=0.630  Sum_probs=22.9

Q ss_pred             cCCCCCCeeecCCCCeEEEccccccCCch
Q 020294          231 GDLWSGNISSDKNGEPVILDPACYYGHNE  259 (328)
Q Consensus       231 gDl~~~Nil~~~~~~~~iID~~~~~G~p~  259 (328)
                      =|.|+|||++++++.+.|-|+-++..|.+
T Consensus       193 FDmHSGNiMf~~~g~p~ITDPVSFS~dr~  221 (362)
T PHA00451        193 FDMHSGNIMFDQDGVPYITDPVSFSHDRE  221 (362)
T ss_pred             ccccCCceeeCCCCCeEecCCccccCccc
Confidence            39999999999999999999755443333

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=84.39  E-value=1.3  Score=40.24  Aligned_cols=76  Identities=18%  Similarity=0.059  Sum_probs=45.6

Q ss_pred             eeeeeCCcccceeEEEEe--CCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CC--ceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGT--DAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TG--GSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~--~~~~v~e~l  129 (328)
                      +-+.+|-|....|-.+..  .+.+|.||+-...  ...++|++ |.|+++. .-.+-.++.+.... .+  --.+|||.+
T Consensus        66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--~KARrEVe-LHw~~s~-h~~iV~IidVyeNs~~~rkcLLiVmE~m  141 (400)
T KOG0604|consen   66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--PKARREVE-LHWMASG-HPHIVSIIDVYENSYQGRKCLLIVMECM  141 (400)
T ss_pred             hhhhhccccCCceEEEEeccchhhhHHHHHhcC--HHHHhHhh-hhhhhcC-CCceEEeehhhhhhccCceeeEeeeecc
Confidence            347778888777766543  2348888887542  33457777 5677653 23344444432211 22  346899999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus       142 eGGeL  146 (400)
T KOG0604|consen  142 EGGEL  146 (400)
T ss_pred             cchHH
Confidence            99754

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=83.36  E-value=8.1  Score=37.60  Aligned_cols=49  Identities=16%  Similarity=-0.000  Sum_probs=33.0

Q ss_pred             eeeeCCcccceeEEEE-eCCccEE-EEecCCC--CcchHHHHHHHHHHHHhcC
Q 020294           56 ICPVGGGCINLASRYG-TDAGSFF-VKTNRSI--GPSMFEGEALGLGAMYETR  104 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~-~~~~~~v-lK~~~~~--~~~~~~~E~~~l~~L~~~~  104 (328)
                      ++.+|=|..++||..- +.+.+|| +|+-...  ..+.-..|+.+|+.+++..
T Consensus        83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D  135 (590)
T KOG1290|consen   83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD  135 (590)
T ss_pred             EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence            6678888899999964 4444554 4766532  1233447999999998753

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=83.25  E-value=2.4  Score=39.93  Aligned_cols=29  Identities=24%  Similarity=0.201  Sum_probs=24.7

Q ss_pred             CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294          224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC  253 (328)
Q Consensus       224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~  253 (328)
                      ....+-|.|++-+|||++ +|.+.+||+-+
T Consensus       339 kkf~fehrnlt~~niLId-~GnvtLIDfkl  367 (488)
T COG5072         339 KKFPFEHRNLTLDNILID-EGNVTLIDFKL  367 (488)
T ss_pred             hcCCcccccccccceeee-cCceEEEEeee
Confidence            466789999999999998 66689999854

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=81.89  E-value=0.79  Score=40.54  Aligned_cols=71  Identities=17%  Similarity=0.184  Sum_probs=42.7

Q ss_pred             eCCcccceeEEEEe-CCc-cEEEEecC-----CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           59 VGGGCINLASRYGT-DAG-SFFVKTNR-----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        59 i~~G~~n~~y~v~~-~~~-~~vlK~~~-----~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      ++.|..+-|+|+-. +.| .|.+|+-.     ..+-+.+++|+.+-+.|.+-   .+-++...-+. ++..|+|+|.++|
T Consensus        19 igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP---~IvrL~~ti~~-~~~~ylvFe~m~G   94 (355)
T KOG0033|consen   19 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP---NIVRLHDSIQE-ESFHYLVFDLVTG   94 (355)
T ss_pred             HccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCC---cEeehhhhhcc-cceeEEEEecccc
Confidence            45566666666432 223 56666532     22346688999998888541   22233322221 6889999999999


Q ss_pred             CC
Q 020294          132 GS  133 (328)
Q Consensus       132 ~~  133 (328)
                      ..
T Consensus        95 ~d   96 (355)
T KOG0033|consen   95 GE   96 (355)
T ss_pred             hH
Confidence            74

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=81.31  E-value=0.93  Score=41.22  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=27.1

Q ss_pred             cceeeeeeeCCcccceeEEEEeCC--ccEEEEecC
Q 020294           51 THITKICPVGGGCINLASRYGTDA--GSFFVKTNR   83 (328)
Q Consensus        51 ~~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~   83 (328)
                      ..+..-+.|+.|..+.+|+++..+  ..|.||+..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~   46 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFL   46 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEe
Confidence            356677888999999999999865  489999875

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=81.11  E-value=5.8  Score=36.74  Aligned_cols=43  Identities=23%  Similarity=0.365  Sum_probs=32.4

Q ss_pred             CCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh
Q 020294          225 EPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC  267 (328)
Q Consensus       225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~  267 (328)
                      ..++|-+||+.+|||+|.+|...+-|.. |--|-.--|++.+.|
T Consensus       369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfc  412 (593)
T KOG0695|consen  369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFC  412 (593)
T ss_pred             hcCeeeeeccccceEEccCCceeecccchhhcCCCCCccccccc
Confidence            4589999999999999999877888853 334555556665555

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=80.74  E-value=15  Score=31.17  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           92 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        92 ~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .|.-+++.|.+. . ++|++++...     .+++.|++...++
T Consensus         8 ~E~lll~~l~~~-~-~~pk~lG~CG-----~~~v~E~~~~~~~   43 (188)
T PF12260_consen    8 NEPLLLQLLQGS-E-PFPKLLGSCG-----RFYVVEYVGAGSL   43 (188)
T ss_pred             cHHHHHHHcCCC-C-CCCCeeeECC-----CEEEEEeecCccc
Confidence            478888999875 3 9999999873     4889999886543

Proteins in this uncharacterised family are described as transmembrane proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	328
3jr1_A	312	Crystal Structure Of Putative Fructosamine-3-Kinase		1e-22
3f7w_A	288	Crystal Structure Of Putative Fructosamine-3-Kinase		5e-18

>pdb|3JR1|A Chain A, Crystal Structure Of Putative Fructosamine-3-Kinase (Yp_719053.1) From Haemophilus Somnus 129pt At 2.32 A Resolution Length = 312

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 73  DAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132
           +  + FVK N     S F  EA  L  + +T +I  P  + +G    G S++++E     
Sbjct: 58  EVQTVFVKINERSYRSXFRAEADQLALLAKTNSINVPLVYGIGN-SQGHSFLLLE--ALN 114
Query: 133 SSRGNQS---VFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG 189
            S+  QS   +F +K+A++H+     K +G D D  +G   Q N W ++W +F++E+R+G
Sbjct: 115 KSKNKQSSFTIFAEKIAQLHQIQGPDK-YGLDFDTWLGPIYQPNDWQTSWAKFFSENRIG 173
Query: 190 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGN-ISSDKNGEPVI 248
           +QL++  ++     I+     +++ +A      N +P +LHG+LW  N I  D   +  +
Sbjct: 174 WQLQICKEK---GLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVD--DKIFV 228
Query: 249 LDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRR 292
            +PACY+G  E +    S    F  +FY  Y E+ P + G+ +R+
Sbjct: 229 CNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERK 273

>pdb|3F7W|A Chain A, Crystal Structure Of Putative Fructosamine-3-Kinase (Yp_290396.1) From Thermobifida Fusca Yx-Er1 At 1.85 A Resolution Length = 288

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 114/265 (43%), Gaps = 26/265 (9%)
Query: 72  TDAGSFFVKTNRSIGPSM---FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128
            D    FVK      P++   F  EALGL   +  R+  +P P   G        +  E+
Sbjct: 37  ADGTPLFVKALPDDAPALDGLFRAEALGLD--WLGRSFGSPVPQVAG---WDDRTLAXEW 91
Query: 129 I-EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHR 187
           + E   +      FG +LA  H AG  S  FG   D  IG  P  N   S W EFYAE R
Sbjct: 92  VDERPPTPEAAERFGHQLAAXHLAGAES--FGATWDGYIGPLPXDNTPRSTWPEFYAEQR 149
Query: 188 LGYQLKLALDQ----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 243
           +   L+ A D+     GD  + ++    + +LA    G    P  +HGDLW+GN+    +
Sbjct: 150 ILPYLRRAADRGALTPGDVRLVEKVLDALDHLA----GDPEPPARIHGDLWNGNVLWQDD 205
Query: 244 GEPVILDPACYYGHNEAEFGMSWCAGFGGSFY----NSYFEVMPKQPGFEKRRDXXXXXX 299
           G  V++DPA + GH EA+      A FG  +     ++Y EV P   G+  R        
Sbjct: 206 GA-VVIDPAAHGGHREADLAX--LALFGLPYLDRVRDAYNEVAPLAEGWRARIPLHQLHP 262
Query: 300 XXXXXXXFGSGYRSSALSIIDDYLR 324
                  FG+ YR++ +      LR
Sbjct: 263 LLVHVCLFGAAYRTTLVDTARAALR 287

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	328
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	2e-88
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	4e-84
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	1e-16
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	1e-10
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	5e-10
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	4e-07
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	5e-07
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	2e-06
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	4e-06
3mes_A	424	Choline kinase; malaria, structural genomics, stru	8e-05
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	3e-04
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	8e-04

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} Length = 312

 Score =  267 bits (682), Expect = 2e-88
 Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 12/294 (4%)

Query: 40  IREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLG 98
           I + +  + G    I     +  G +N       +  + FVK N     SMF  EA  L 
Sbjct: 24  ISQVLAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLA 83

Query: 99  AMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKG 157
            + +T +I  P  + +G    G S++++E +      + + ++F +K+A++H+     K 
Sbjct: 84  LLAKTNSINVPLVYGIGNSQ-GHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDK- 141

Query: 158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
           +G D D  +G   Q N W ++W +F++E+R+G+QL++  ++      +     +++ +A 
Sbjct: 142 YGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLI---FGNIDLIVQIVAD 198

Query: 218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG-MSWCAGFGGSFYN 276
                N +P +LHG+LW  N     + +  + +PACY+G  E +    S    F  +FY 
Sbjct: 199 TLSKHNPKPSILHGNLWIENCIQV-DDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQ 257

Query: 277 SYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF---GSGYRSSALSIIDDYLRMLK 327
            Y E+ P + G+ +R+ +Y LY+ LN    +      Y S    +I+  L  + 
Sbjct: 258 RYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILHKID 311

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Length = 339

 Score = 78.6 bits (193), Expect = 1e-16
 Identities = 38/293 (12%), Positives = 77/293 (26%), Gaps = 31/293 (10%)

Query: 35  LSDDPIREWILSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEG 92
           +    + E +             I   G      A +  +++ S+F+K        +   
Sbjct: 6   IQAQQLIELLKVHYGIDIHTAQFI-QGGADTNAFAYQADSESKSYFIKLKYGYHDEINLS 64

Query: 93  EALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSV-------FG 142
               L      + I  P       L         I   FI    +   Q++        G
Sbjct: 65  IIRLL-HDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH-APNGFTQNLTGKQWKQLG 122

Query: 143 KKLAEMHKAGKSSKGFGFD--VDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG 200
           K L ++H+                +      +  + +      ++ +L    K   +Q  
Sbjct: 123 KVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNS 182

Query: 201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD-PACYYGHNE 259
                 R     + L+   +    +  L H D+ +GN+         I+D         E
Sbjct: 183 A--AIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKE 240

Query: 260 AEFGMSWCAGFGG--------SFYNSYFEVMPKQ---PGFEKRRDLYMLYHYL 301
            +                    FY  Y E+   +     +   R +  +  Y 
Sbjct: 241 RDLMFIGGGVGNVWNKPHEIQYFYEGYGEINVDKTILSYYRHERIVEDIAVYG 293

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} Length = 346

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 47/305 (15%), Positives = 92/305 (30%), Gaps = 36/305 (11%)

Query: 52  HITKICPVGGGCINLASRYGTDAGSFFVK-TNRSIGPSMFEGEALGLGAMYETRTIRAPR 110
              KI  + G  + L  +  TD+G+  +K  +R    ++F   A         + +  P 
Sbjct: 33  QAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDY---LAKKGMNVPG 89

Query: 111 P--FKVGALPT---GGSYIIMEFIEFGSSRGNQSV-----FGKKLAEMHKAGKSSKG-FG 159
               K G+L +      +++ ++IE G               K LA+ H A    +   G
Sbjct: 90  ILPNKKGSLYSKHGSFLFVVYDWIE-GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNG 148

Query: 160 FDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS--TIYQRGHRLMKNL-- 215
             +   +G  P         +E +       +       Y        + G R+   L  
Sbjct: 149 VPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQ 208

Query: 216 ---APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGM------- 264
               P  E +   P L H D  +GN    +N +  ++D     +     +          
Sbjct: 209 STYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLD 268

Query: 265 ---SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 321
               W         N+Y    P     +K+  +++   +                ++  +
Sbjct: 269 TTGVWDDETFNVMLNAYESRAPLTE-EQKQV-MFIDMLFPYELYDVIREKYVRKSALPKE 326

Query: 322 YLRML 326
            L   
Sbjct: 327 ELESA 331

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Length = 420

 Score = 59.2 bits (142), Expect = 5e-10
 Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 44/310 (14%)

Query: 35  LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEA 94
           +   P     +   K+     I  VG G +N        +GS  +K        + E   
Sbjct: 18  IKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWP 77

Query: 95  LGLG-AMYETRTIRAPRPFKVGALPT------GGSYIIMEFIE-------FGSSRGNQ-- 138
           +    A +E  T+R         +P         + I M ++E        G   G +  
Sbjct: 78  MTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYP 137

Query: 139 ---SVFGKKLAEMHKAGKSSKGFGFDVDNTIGST---PQINKWTSN--WIEFYAEHRLGY 190
                    +A+             +    +       ++ + T    + + Y       
Sbjct: 138 FLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNR 197

Query: 191 QLKLALDQ-----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 245
                LD        DS +      L                L+HGDL +G++   ++  
Sbjct: 198 WTSPYLDDDAKAVREDSALKLEIAELKSMF------CERAQALIHGDLHTGSVMVTQD-S 250

Query: 246 PVILDPA-CYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDL--YMLYHYLN 302
             ++DP   +YG    + G      + G+   ++F           R++   ++L     
Sbjct: 251 TQVIDPEFSFYGPMGFDIGA-----YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305

Query: 303 HYNLFGSGYR 312
            +NLF   + 
Sbjct: 306 TWNLFNKRFI 315

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Length = 397

 Score = 50.0 bits (118), Expect = 5e-07
 Identities = 42/329 (12%), Positives = 94/329 (28%), Gaps = 51/329 (15%)

Query: 34  ALSDDPIREWILSEG--KATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPSM 89
            L++       +  G   +        +G G +N            +  +K        +
Sbjct: 11  TLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVV 70

Query: 90  FEG----------EALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE------FGS 133
            E           E+  L    E      PR F      T  +  +ME +        G 
Sbjct: 71  GESWPLTIDRARIESSALIRQGEHVPHLVPRVF---YSDTEMAVTVMEDLSHLKIARKGL 127

Query: 134 SRGNQ-----SVFGKKLAEMHKAGKSSKGFGFDVDNTIG--STPQINKWTSNWI--EFYA 184
             G          G+ L +                  +   + P++   T   +  + + 
Sbjct: 128 IEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF 187

Query: 185 EHRLG----YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISS 240
           +H                + + ++     +L K+             L+HGDL +G+I +
Sbjct: 188 DHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFL------TSAETLIHGDLHTGSIFA 241

Query: 241 DKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYF--EVMPKQPGFEKRRDLYMLY 298
            ++   VI     +YG    + G      F  + + +    +   ++P +E    ++  +
Sbjct: 242 SEHETKVIDPEFAFYGPIGFDVGQ-----FIANLFLNALSRDGADREPLYEHVNQVWETF 296

Query: 299 H--YLNHYNLFGSGYRSSALSIIDDYLRM 325
              +   +        ++    + D L  
Sbjct: 297 EETFSEAWQKDSLDVYANIDGYLTDTLSH 325

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* Length = 306

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 40/302 (13%), Positives = 82/302 (27%), Gaps = 55/302 (18%)

Query: 53  ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSM-FEGEALGLGAMYETRTIRAPRP 111
           I  +  +G G  N A     D   +  +  +S   +     E   L  +     +  P+ 
Sbjct: 21  IQSVESLGEGFRNYAILVNGD---WVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQY 77

Query: 112 FKVGALPTGGSYIIMEFIEFGSSRGNQSV--------------FGKKLAEMHKAGKSSKG 157
             +G    G  ++    ++ G   G   +                + + E+         
Sbjct: 78  VYIGKRSDGNPFVGYRKVQ-GQILGEDGMAVLPDDAKDRLALQLAEFMNELSAF------ 130

Query: 158 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 217
               V+  I +   +    +  +          Q+   LD+     +  R    M +   
Sbjct: 131 ---PVETAISAGVPVTNLKNKILLLSEAVED--QVFPLLDESLRDYLTLRFQSYMTHPVY 185

Query: 218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL------------DPACYYGHNEAEFGMS 265
                   P L+HGDL   +  ++ N     L            DP         ++   
Sbjct: 186 T----RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDY-------DYVYL 234

Query: 266 WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 325
                G  F          +   +       L+   +  +    G R+     I + L +
Sbjct: 235 L-EDCGELFTRQVMAY-RGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLEL 292

Query: 326 LK 327
           L+
Sbjct: 293 LE 294

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 Length = 264

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 27/221 (12%), Positives = 56/221 (25%), Gaps = 30/221 (13%)

Query: 71  GTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130
                  FVKT+ S   +  + EA  L  +  T  +       V     G  ++++  + 
Sbjct: 41  AQGRPVLFVKTDLSGALNELQDEAARLSWLATTG-VPCAAVLDVVT-EAGRDWLLLGEVP 98

Query: 131 -------FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY 183
                    +     S+    +  +H    ++  F     + I       +      +  
Sbjct: 99  GQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDL 158

Query: 184 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 243
            E   G                    RL   +         +  + HGD    NI  +  
Sbjct: 159 DEEHQGLAPAELFA------------RLKARMPDG-----EDLVVTHGDACLPNIMVENG 201

Query: 244 GEPVILDPA-CYYGHNEAEFGM---SWCAGFGGSFYNSYFE 280
                +D           +  +         GG + + +  
Sbjct: 202 RFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLV 242

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Length = 424

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 34/271 (12%), Positives = 70/271 (25%), Gaps = 22/271 (8%)

Query: 55  KICPVGGGCIN--LASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF 112
           ++  +  G  N         ++ S  +K  R +     +       +  E    R     
Sbjct: 74  EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNI 133

Query: 113 KVGA--LPTGGSYIIMEFIEFG-------SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVD 163
            +    +       I EFI+                   K +  +H        F    D
Sbjct: 134 NIAPNIIADFPEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFD 193

Query: 164 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKL------ALDQYGDSTIYQRGHRLMKNLAP 217
                  +I  W        +++      +L       +DQ  +  +      + + L  
Sbjct: 194 KEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALEL 253

Query: 218 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVI---LDPACYYGHNEAEFGMSWCAGFGGSF 274
                       H DL   N+   +N   +I        + G + A +   +   +    
Sbjct: 254 KLYSPAFSLVFAHNDLQENNLLQTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCSEK 313

Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYN 305
              +       P  E R+    +  YL+   
Sbjct: 314 QPYFKFKYEDYPCEELRKL--FISVYLSQTL 342

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Length = 263

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 22/227 (9%), Positives = 54/227 (23%), Gaps = 40/227 (17%)

Query: 58  PVGGGCINLAS-RYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE-----TRTIRAPRP 111
               G       +   +  + ++K    +  S ++G    +    +        +  P+ 
Sbjct: 20  KDTEGMSPAKVYKLVGENENLYLK----MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKV 75

Query: 112 FKVGALPTGGSYIIMEFIEF----------GSSRGNQSVFGKKLAEMHKAGKSSKGFGFD 161
                   G S ++M   +            S      ++ + +   H    S   +   
Sbjct: 76  LHFERHD-GWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNS 134

Query: 162 VDNTIGSTPQINKWTSNWIEFYAEHRLG-YQLKLALDQYGDSTIYQRGHRLMKNLAPLFE 220
           +D+ +             +++   + L     +   +        +    L         
Sbjct: 135 LDSRLA-----------ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEE-- 181

Query: 221 GVNVEPCLLHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFGMSW 266
               E    HGDL   NI          +D           +     
Sbjct: 182 ----ELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCV 224

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A Length = 304

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 41/327 (12%), Positives = 88/327 (26%), Gaps = 62/327 (18%)

Query: 32  MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSM-F 90
           M   + D + + I        I  I   G G   +A     D   F  K  +    S   
Sbjct: 1   MRTYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEINRD---FIFKFPKHSRGSTNL 57

Query: 91  EGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEFGSSRGNQSV-------- 140
             E   L  ++    +  P     G        S+     I+ G       +        
Sbjct: 58  FNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK-GVPLTPLLLNNLPKQSQ 116

Query: 141 ------FGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194
                   + L+E+H            ++ +   +  +  +     E         ++K 
Sbjct: 117 NQAAKDLARFLSELH-----------SINISGFKSNLVLDFREKINEDNK------KIKK 159

Query: 195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGN-ISSDKNGEPV-ILD-- 250
            L +       ++     +++          PCL+H D  S + +   +      I+D  
Sbjct: 160 LLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFG 219

Query: 251 ------PACYYGHNEAEFGMSW--CAGFGGSFYNSYFEVMPKQ--PGFEKRRDLYMLYHY 300
                 P         +F         +G  F +        +  P   ++  +   Y  
Sbjct: 220 DAAISDPDN-------DFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS 272

Query: 301 LNHYNLFGSGYRSSALSIIDDYLRMLK 327
                ++  G     +   ++ L  ++
Sbjct: 273 F-EKIIY--GKEYGYMDWYEEGLNEIR 296

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	328
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	100.0
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	100.0
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	100.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	99.97
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	99.97
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	99.95
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.95
3ats_A	357	Putative uncharacterized protein; hypothetical pro	99.95
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.94
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	99.93
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	99.93
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	99.93
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	99.93
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.91
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	99.91
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.9
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	99.9
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.89
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	99.88
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	99.86
3mes_A	424	Choline kinase; malaria, structural genomics, stru	99.86
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	99.86
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	99.85
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	99.84
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	99.81
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.77
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.68
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.79
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.76
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.7
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.69
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.67
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.64
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.61
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.55
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.54
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.53
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.52
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.51
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	98.51
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.5
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.47
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.44
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.44
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.43
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.43
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.41
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.41
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.39
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.38
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.38
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.37
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.37
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.36
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.35
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.35
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.33
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.31
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.31
3uqc_A	286	Probable conserved transmembrane protein; structur	98.29
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.29
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.29
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.29
3niz_A	311	Rhodanese family protein; structural genomics, str	98.28
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.28
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.27
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.27
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.26
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.26
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.26
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.26
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.25
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.25
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.25
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.25
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.24
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.23
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.22
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.22
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.22
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.21
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.21
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.21
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.21
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.21
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.2
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.2
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.2
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.2
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.2
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.19
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.19
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.19
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.19
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.18
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.18
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.18
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.18
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.18
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.17
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.17
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.17
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.16
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.15
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.15
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.15
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.12
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.12
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.11
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.11
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.1
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.1
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.1
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.1
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.1
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.1
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.09
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.07
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.04
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.03
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.03
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.03
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.03
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.03
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.03
3bhy_A	283	Death-associated protein kinase 3; death associate	98.03
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.02
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.02
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.02
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.01
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.01
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.01
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.01
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.01
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.01
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.01
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.99
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.99
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.99
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.99
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.98
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.98
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	97.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	97.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	97.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	97.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.94
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	97.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.94
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.92
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.92
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	97.92
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	97.92
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.91
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.91
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	97.91
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	97.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.9
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	97.9
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.89
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	97.89
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.89
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	97.88
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	97.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.88
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.88
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.87
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	97.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.85
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	97.84
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.84
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.84
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	97.83
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	97.83
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	97.82
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.82
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	97.81
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.79
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.77
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.77
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	97.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	97.76
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	97.74
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.74
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.73
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.73
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.73
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	97.72
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.72
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	97.71
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.7
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.67
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.66
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.64
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.64
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.63
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.62
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	97.6
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	97.6
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.59
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.53
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	97.53
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.51
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.5
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.49
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.47
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	97.46
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	97.38
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.35
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.21
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	86.86

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=100.00  E-value=3.8e-48  Score=351.49  Aligned_cols=277  Identities=28%  Similarity=0.402  Sum_probs=240.5

Q ss_pred             hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCccccee
Q 020294           38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      ++|.+-+.+. .|.+|.+++++++|..|.+|+|+++|| +||||+++..   ....++.|+++|++|++..++|||+++.
T Consensus         3 ~~v~a~~~~l-~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~   81 (288)
T 3f7w_A            3 NSVAARVTEL-TGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG   81 (288)
T ss_dssp             HHHHHHHHHH-HCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred             HHHHHHHHHh-cCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe
Confidence            5677888777 566899999999999999999999887 7999998753   2457899999999999877899999998


Q ss_pred             ccccCCCceEEEEeeecCCCCC-ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHH
Q 020294          114 VGALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL  192 (328)
Q Consensus       114 ~~~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~  192 (328)
                      .+.     .+++|||+++.... ..++++|+.|+++|....+  .||+..++.+|.+++.+.|.++|.+|+.+.++.++.
T Consensus        82 ~~~-----~~lv~e~l~~~~~~~~~~~~lg~~La~lH~~~~~--~fg~~~~~~~g~~~~~~~~~~~w~~~~~~~rl~~~~  154 (288)
T 3f7w_A           82 WDD-----RTLAMEWVDERPPTPEAAERFGHQLAAMHLAGAE--SFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYL  154 (288)
T ss_dssp             EET-----TEEEEECCCCCCCCHHHHHHHHHHHHHHHHTCCS--SBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHH
T ss_pred             ccC-----ceEEEEeecccCCChHHHHHHHHHHHhhhhcccc--ccccccccccccccccCcccccchhhhHHhhHHHHH
Confidence            863     49999999998764 4578999999999998864  589999999999999999999999999877888877


Q ss_pred             HHHHhhCC-ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhh-hc-C
Q 020294          193 KLALDQYG-DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSW-CA-G  269 (328)
Q Consensus       193 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~~-~~-~  269 (328)
                      +.+.+... +......++++.+.++.++.. ..+++|||||||++||++++++ +.+||+.+++||+++||+++. ++ +
T Consensus       155 ~~~~~~~~~~~~~~~~~e~l~~~L~~~~~~-~~~p~LvHGDlw~gNvl~~~~g-~~~iDp~~~~g~~e~Dla~~~~fg~~  232 (288)
T 3f7w_A          155 RRAADRGALTPGDVRLVEKVLDALDHLAGD-PEPPARIHGDLWNGNVLWQDDG-AVVIDPAAHGGHREADLAMLALFGLP  232 (288)
T ss_dssp             HHHHHTTSSCHHHHHHHHHHHHTHHHHTCS-CCCCEEECSCCSGGGEEEETTE-EEECSCCCEEECHHHHHHHHHHHCCT
T ss_pred             HHHHhccCcchhhhHHHHHHHHHHHHhccc-CCCCeeeecCCCCCcEEEcCCC-eEEEecccccCCHHHHHHHHHhcCCC
Confidence            76665543 445566677777777776665 4678999999999999999887 789999999999999999874 54 7


Q ss_pred             CChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020294          270 FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  324 (328)
Q Consensus       270 ~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~  324 (328)
                      +.++|+++|.+..|++++|++|+.+|+||++|+|+++||++|++++.++++++|+
T Consensus       233 ~~~~f~~~Y~~~~pl~~~~~~R~~ly~ly~~l~h~~~fg~~y~~~~~~~~~~~l~  287 (288)
T 3f7w_A          233 YLDRVRDAYNEVAPLAEGWRARIPLHQLHPLLVHVCLFGAAYRTTLVDTARAALR  287 (288)
T ss_dssp             THHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHhh
Confidence            8899999999999999999999999999999999999999999999999999985

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=100.00  E-value=8.3e-48  Score=352.36  Aligned_cols=283  Identities=26%  Similarity=0.478  Sum_probs=243.8

Q ss_pred             ChhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceec
Q 020294           36 SDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV  114 (328)
Q Consensus        36 ~~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~  114 (328)
                      ..+.|.++|.+. |.+..+.+++++++|.+|.+|+|++++++||||+++......++.|+++|++|++..+++||+|+..
T Consensus        20 ~~~~l~~~L~~~lg~~~~i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~   99 (312)
T 3jr1_A           20 MWKSISQVLAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGI   99 (312)
T ss_dssp             HHHHHHHHHHHHHSSCCCCCEEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred             cHHHHHHHHHHHhCCCcceeeeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence            467899999887 5555789999999999999999999888999999876555678999999999998768999999998


Q ss_pred             cccCCCceEEEEeeecCCCCC-ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHH
Q 020294          115 GALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK  193 (328)
Q Consensus       115 ~~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~  193 (328)
                      +.. .+..|+||||++|.++. ..+.++|+.||+||+...+ +.||++.++++|.+||.|.|.++|.+|+.+.|+.++++
T Consensus       100 ~~~-~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~-~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~  177 (312)
T 3jr1_A          100 GNS-QGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGP-DKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQ  177 (312)
T ss_dssp             EEC-SSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCC-SSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHH
T ss_pred             eec-CCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCC-CCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHH
Confidence            765 47899999999999764 6789999999999999863 35999999999999999999999999998778988887


Q ss_pred             HHHhhCCC-hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCC
Q 020294          194 LALDQYGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFG  271 (328)
Q Consensus       194 ~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~-~~~~~~  271 (328)
                      .+.+.+.. ++    ++++++.+.+.+.+...+++|||||||++|+++++++ ++|||+.+++|||++||+++ .++++.
T Consensus       178 ~a~~~g~~~~~----~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~~~~g~~~~Dl~~~~~~~~~~  252 (312)
T 3jr1_A          178 ICKEKGLIFGN----IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPACYWGDRECDIAFSSLFEPFP  252 (312)
T ss_dssp             HHHHHTCCCSC----HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCCCEEECTHHHHHHHTTSSCCC
T ss_pred             HHHHcCCChHH----HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCccccCChHHHHHHHHHhCCcc
Confidence            76655432 23    3344444444454334688999999999999999887 99999988899999999986 457788


Q ss_pred             hhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhcc---CcHHHHHHHHHHHHHH
Q 020294          272 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGS---GYRSSALSIIDDYLRM  325 (328)
Q Consensus       272 ~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~---~y~~~~~~~~~~~~~~  325 (328)
                      ++|+++|.+..|++++|++|+.+|++++.++|++.||+   +|+.+++++|+++++.
T Consensus       253 ~~~~~~Y~~~~pl~~~~~~R~~ly~l~~~l~~~~~fG~~~~~Y~~~~~~~~~~~~~~  309 (312)
T 3jr1_A          253 TNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILHK  309 (312)
T ss_dssp             HHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999   9999999999999853

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=99.97  E-value=1.7e-29  Score=231.77  Aligned_cols=247  Identities=15%  Similarity=0.209  Sum_probs=170.0

Q ss_pred             hhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCC
Q 020294           29 TFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~  107 (328)
                      |||||.++.+++.+++.+++.+ .+.+++++++|..|.+|++++++++||+|+++. .....+..|.+++++|++. ++|
T Consensus         1 m~v~~~~~~~~l~~~l~~~~~~-~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~-g~~   78 (322)
T 2ppq_A            1 MAVYTDITEDELRNFLTQYDVG-SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAK-GLS   78 (322)
T ss_dssp             ----CCCCHHHHHHHHTTBCCC-CEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHT-TCC
T ss_pred             CCccccCCHHHHHHHHHhCCCC-cceEeeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence            8999999999999999887664 788999999999999999999999999999876 3456788999999999987 799


Q ss_pred             cccceeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCccc
Q 020294          108 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN  178 (328)
Q Consensus       108 VP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~  178 (328)
                      ||+++......     ++..+++|+|++|.+..    ..+.++|+.||+||.....   |+.+..+..+        ...
T Consensus        79 vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~~~~~~--------~~~  147 (322)
T 2ppq_A           79 CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEG---FEIKRPNALS--------VDG  147 (322)
T ss_dssp             CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTT---CCCCCBCTTS--------HHH
T ss_pred             CCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhcc---CCCcccCccC--------hHH
Confidence            99999764321     36789999999998753    4578999999999998753   3322111110        023


Q ss_pred             HHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCC
Q 020294          179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  257 (328)
Q Consensus       179 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~  257 (328)
                      |...+...  .   ... +. ..+.+.+.+++.++.+...+.. ..+.++||||++++|||+++++.++|||| .+++|+
T Consensus       148 w~~~~~~~--~---~~~-~~-~~~~l~~~l~~~~~~l~~~~~~-~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~  219 (322)
T 2ppq_A          148 WKVLWDKS--E---ERA-DE-VEKGLREEIRPEIDYLAAHWPK-DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDL  219 (322)
T ss_dssp             HHHHHHHH--G---GGG-GG-TSTTHHHHHHHHHHHHHHHCCC-SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             HHHHHHHH--H---HHH-Hh-hhhhhHHHHHHHHHHHHhhCcc-cCCcccCCCCCCccCEEEeCCceEEEecchhccCch
Confidence            43322210  0   000 00 1111222334444444433333 35789999999999999987766689998 578999


Q ss_pred             chhhhhhh---hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHHHH
Q 020294          258 NEAEFGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYM  296 (328)
Q Consensus       258 p~~DLa~~---~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~  296 (328)
                      +.+||+.+   +|.    .++    +.|+++|.+..|+++...+++..+.
T Consensus       220 ~~~Dla~~l~~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~  269 (322)
T 2ppq_A          220 LAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLS  269 (322)
T ss_dssp             HHHHHHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            99999975   231    132    5799999999999876555555554

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=99.95  E-value=1e-27  Score=219.03  Aligned_cols=267  Identities=13%  Similarity=0.135  Sum_probs=178.0

Q ss_pred             cCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccce
Q 020294           34 ALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPF  112 (328)
Q Consensus        34 ~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~  112 (328)
                      +++.+.+.++|.+..++..+.+++++++|..|.+|++   +++||+|+++.. ....++.|+++|++|++..+++||+++
T Consensus         2 ~~~~~~l~~~l~~~~p~~~~~~v~~l~~G~~n~v~~v---g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~   78 (306)
T 3tdw_A            2 KQNKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILV---NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYV   78 (306)
T ss_dssp             --CHHHHHHHHHHHCTTSCCSCEEEEEECSSEEEEEE---TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEE
T ss_pred             CCCHHHHHHHHHHHCCCCCceeeeecCCCcceeEEEE---CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeE
Confidence            4678899999998866778889999999999999999   579999997642 235688999999999987789999999


Q ss_pred             eccccCCCceEEEEeeecCCCCC-------------ccHHHHHHHHHHHHhcCCCCC-CCCCCCCCcccccccCCCCccc
Q 020294          113 KVGALPTGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSN  178 (328)
Q Consensus       113 ~~~~~~~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~-~~g~~~~~~~g~~~~~~~~~~~  178 (328)
                      ..+...++.+|++|+|++|.++.             ....++|+.|++||+.+.+.. ..|.+         .     ..
T Consensus        79 ~~~~~~~g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p---------~-----~~  144 (306)
T 3tdw_A           79 YIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVP---------V-----TN  144 (306)
T ss_dssp             EEEECTTSCEEEEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCC---------B-----CC
T ss_pred             eecccCCCceEEEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCC---------h-----HH
Confidence            98854367899999999998762             125789999999999886310 01211         1     13


Q ss_pred             HHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHH-hhh-hccCCCCCCceeccCCCCCCeeecC----CCCeEEEcc-
Q 020294          179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN-LAP-LFEGVNVEPCLLHGDLWSGNISSDK----NGEPVILDP-  251 (328)
Q Consensus       179 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~-~l~~~~~~~~LiHgDl~~~Nil~~~----~~~~~iID~-  251 (328)
                      |...+..  ....++.......+....+.+.+..+. +.. .+.  ..++++||||||++||++++    ++.++|||| 
T Consensus       145 w~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~--~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~  220 (306)
T 3tdw_A          145 LKNKILL--LSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYT--RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFG  220 (306)
T ss_dssp             HHHHHHH--HHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHH--CCCCEEECSCCSGGGEEECTTCSSCCEEEECCCT
T ss_pred             HHHHHHH--HHHHHHHhcccccchhhHHHHHHHHHHHHhCcccc--cCCCeeEeCCCCcccEEEecCCCCCceEEEEehh
Confidence            4432221  111111111111111111222222211 111 111  25789999999999999987    334589999 


Q ss_pred             ccccCCchhhhhhhhh-c--CCChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh----c-cCcHHHHHHHHHHHH
Q 020294          252 ACYYGHNEAEFGMSWC-A--GFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF----G-SGYRSSALSIIDDYL  323 (328)
Q Consensus       252 ~~~~G~p~~DLa~~~~-~--~~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~----~-~~y~~~~~~~~~~~~  323 (328)
                      .+++|||++||+.++. .  .+.+.|++ |....+.++. .+|+.+|.++..+ ++..|    | ..+...+.++++++-
T Consensus       221 ~a~~gd~~~Dla~~~~~~~~~~~~~~~~-Y~~~~~~~~~-~~r~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~  297 (306)
T 3tdw_A          221 DAAISDPDYDYVYLLEDCGELFTRQVMA-YRGEVDLDTH-IRKVSLFVTFDQV-SYLLEGLRARDQDWISEGLELLEEDK  297 (306)
T ss_dssp             TCEEECGGGGGHHHHHHTCHHHHHHHHH-HTTCSCHHHH-HHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHhcCHHHHHHHHH-hcccccCCCH-HHHHHHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence            4789999999997642 1  23357889 9876322222 7899999887653 33333    3 356777877777664


Q ss_pred             H
Q 020294          324 R  324 (328)
Q Consensus       324 ~  324 (328)
                      +
T Consensus       298 ~  298 (306)
T 3tdw_A          298 A  298 (306)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.95  E-value=4.9e-26  Score=212.10  Aligned_cols=254  Identities=16%  Similarity=0.231  Sum_probs=172.5

Q ss_pred             hcCChhHHHHHHHhcCCC-cceeeeeeeCCcccceeEEEEeCCccEEEEecC--CC----CcchHHHHHHHHHHHHhcCC
Q 020294           33 AALSDDPIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNR--SI----GPSMFEGEALGLGAMYETRT  105 (328)
Q Consensus        33 ~~~~~~~i~~~l~~~~~~-~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~--~~----~~~~~~~E~~~l~~L~~~~~  105 (328)
                      ..++.+.+++||.+..++ ..+.+++++++|.+|.+|++++++++||+|..+  ..    ....+..|+++++.|++. +
T Consensus        19 ~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~-~   97 (359)
T 3dxp_A           19 QRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT-D   97 (359)
T ss_dssp             -CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTS-S
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC-C
Confidence            457899999999988433 367889999999999999999988999999987  42    235688999999999984 7


Q ss_pred             CCcccceeccccC--CCceEEEEeeecCCCCC-------------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccc
Q 020294          106 IRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP  170 (328)
Q Consensus       106 v~VP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~  170 (328)
                      +|||+++..+...  .|..|+||||++|..+.             ....++++.|++||+...+.  .++...   +. |
T Consensus        98 vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~--~~~~~~---~~-~  171 (359)
T 3dxp_A           98 VPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQA--IGLGDY---GK-P  171 (359)
T ss_dssp             SCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTT--TTCTTS---SC-C
T ss_pred             CCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchh--cccccc---CC-C
Confidence            9999999987643  26789999999998652             12688999999999988643  232110   10 0


Q ss_pred             cCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCC-CCCceeccCCCCCCeeecCCCC--eE
Q 020294          171 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVN-VEPCLLHGDLWSGNISSDKNGE--PV  247 (328)
Q Consensus       171 ~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~LiHgDl~~~Nil~~~~~~--~~  247 (328)
                            ..+..    ..+..+.+........  ....++++.+.+...+.... .++++||||+|++|||+++++.  .+
T Consensus       172 ------~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~  239 (359)
T 3dxp_A          172 ------GNYFQ----RQIERWTKQYKLSETE--SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA  239 (359)
T ss_dssp             ------SCHHH----HHHHHHHHHHHHHCCS--CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred             ------CCchH----HHHHHHHHHHHhcCCc--CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence                  11111    1122222221111111  12345556666655544311 1579999999999999987653  58


Q ss_pred             EEccc-cccCCchhhhhhhh-h---c---------------CC--ChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHH
Q 020294          248 ILDPA-CYYGHNEAEFGMSW-C---A---------------GF--GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYN  305 (328)
Q Consensus       248 iID~~-~~~G~p~~DLa~~~-~---~---------------~~--~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~  305 (328)
                      ||||+ +.+|+|++||+++. +   .               ++  .++|+++|++..+.+.  .+++.+|..+..+.+..
T Consensus       240 viDwe~a~~g~p~~DLa~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~Y~~~~g~~~--~~~~~~~~~~~~~r~a~  317 (359)
T 3dxp_A          240 VLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPI--TGDWNFYLAFSMFRIAG  317 (359)
T ss_dssp             ECCCTTCEEECHHHHHHHHGGGGTSCSSSSCCCTTSCHHHHTCCCHHHHHHHHHHHHSSCC--CSCHHHHHHHHHHHHHH
T ss_pred             EECccccccCCHHHHHHHHHHHhccCccccccccCCCccCCCCCCHHHHHHHHHHHhCCCC--cccchHHHHHHHHHHHH
Confidence            99995 67999999999652 1   1               11  2579999999877652  24567777766666555


Q ss_pred             Hh
Q 020294          306 LF  307 (328)
Q Consensus       306 ~~  307 (328)
                      .+
T Consensus       318 i~  319 (359)
T 3dxp_A          318 IL  319 (359)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=99.95  E-value=1.2e-27  Score=222.66  Aligned_cols=255  Identities=15%  Similarity=0.144  Sum_probs=169.7

Q ss_pred             hhHHHHHHHhcCCC---cceeeeeee-CCcccceeEEEEeC--------CccEEEEecCCCC------cchHHHHHHHHH
Q 020294           37 DDPIREWILSEGKA---THITKICPV-GGGCINLASRYGTD--------AGSFFVKTNRSIG------PSMFEGEALGLG   98 (328)
Q Consensus        37 ~~~i~~~l~~~~~~---~~i~~v~~i-~~G~~n~~y~v~~~--------~~~~vlK~~~~~~------~~~~~~E~~~l~   98 (328)
                      .+.|++||.+...+   .++.+++++ ++|.+|.+|+++++        +++||+|+++...      ...++.|+++++
T Consensus         3 ~~~l~~~l~~~~~~~~~~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~   82 (357)
T 3ats_A            3 PAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIR   82 (357)
T ss_dssp             HHHHHHHHHHHSCTTCCCEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcCCCceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHH
Confidence            46799999888443   257889999 99999999999876        4589999987532      356889999999


Q ss_pred             HHHhcCCCCcccceeccccC--CCceEEEEeeecCCCCCc---------------------cHHHHHHHHHHHHhcCCCC
Q 020294           99 AMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSRG---------------------NQSVFGKKLAEMHKAGKSS  155 (328)
Q Consensus        99 ~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l~G~~~~~---------------------~~~~lg~~La~lH~~~~~~  155 (328)
                      +|++.+++|||+++..+...  .+.+|+||||++|..+..                     ..+++|+.|++||+...+.
T Consensus        83 ~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~  162 (357)
T 3ats_A           83 LVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQ  162 (357)
T ss_dssp             HHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHH
T ss_pred             HHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            99987679999999886542  267899999999986421                     2578999999999987521


Q ss_pred             CCCCCCCCCcccccccCCCC----cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCC--CCCcee
Q 020294          156 KGFGFDVDNTIGSTPQINKW----TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVN--VEPCLL  229 (328)
Q Consensus       156 ~~~g~~~~~~~g~~~~~~~~----~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~Li  229 (328)
                        .|+..   .+.......+    ...|...+.         ........   ...++++.+.+...++...  .+++||
T Consensus       163 --~~l~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~l~~~~p~~~~~~~~~l~  225 (357)
T 3ats_A          163 --NTFSF---LTQGRTSDTTLHRHFNWVRSWYD---------FAVEGIGR---SPLLERTFEWLQSHWPDDAAAREPVLL  225 (357)
T ss_dssp             --HHTGG---GC-----CCHHHHHHHHHHHHHH---------HHHHHHCC---CHHHHHHHHHHHHTCCHHHHHSCCEEE
T ss_pred             --CChhh---ccCCCCCCchHHHHHHHHHHHHH---------hhccCCCC---ChHHHHHHHHHHHhCCCcccCCCceEE
Confidence              11100   0000000000    011211111         10000011   1123333433333222100  268999


Q ss_pred             ccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh-h-------------cCC-----ChhhHHHHhhhCCCCCCHH
Q 020294          230 HGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW-C-------------AGF-----GGSFYNSYFEVMPKQPGFE  289 (328)
Q Consensus       230 HgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~-~-------------~~~-----~~~f~~~Y~~~~pl~~~~~  289 (328)
                      |||||++|||+++++.++||||+ +++|+|++||+.+. +             .++     .++|+++|++..+++.   
T Consensus       226 HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~Dla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~---  302 (357)
T 3ats_A          226 WGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL---  302 (357)
T ss_dssp             CSSCSGGGEEEETTEEEEECCGGGCEEECHHHHHHHHHHHHHHHHHHHHHTTCCCCTTSSCHHHHHHHHHHHHCCCC---
T ss_pred             eCCCCCCeEEEeCCcEEEEEcccccccCCcHHHHHHHHhhcccccccccccCCCCCCCcccHHHHHHHHHHHhCCCc---
Confidence            99999999999865557999985 78999999999652 1             134     3579999999988763   


Q ss_pred             HHHHHHHHHHHHHHHHHhccCc
Q 020294          290 KRRDLYMLYHYLNHYNLFGSGY  311 (328)
Q Consensus       290 ~r~~ly~l~~~l~~~~~~~~~y  311 (328)
                      +++.+|.++..+.+...++..|
T Consensus       303 ~~~~~~~~~~~~r~~~~~~~~~  324 (357)
T 3ats_A          303 GDLHWFYVYSGVMWACVFMRTG  324 (357)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhchHHHHHHHHHHHHHHHHHH
Confidence            4678888888877777775544

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.94  E-value=8e-26  Score=206.01  Aligned_cols=246  Identities=18%  Similarity=0.153  Sum_probs=170.0

Q ss_pred             hhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCccc
Q 020294           32 MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPR  110 (328)
Q Consensus        32 ~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~  110 (328)
                      |..++.+.++++|.+..++..+.+++++++|..|.+|+++   ++||+|+++.. ....++.|+++++.|++..++|||+
T Consensus         1 ~~~~~~~~l~~~l~~~~p~~~~~~i~~~~~G~~n~v~~v~---~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~   77 (304)
T 3sg8_A            1 MRTYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEIN---RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPE   77 (304)
T ss_dssp             CCCCCHHHHHHHHHHHCTTCCCCCCCEEEECSSEEEEEST---TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCC
T ss_pred             CCcCCHHHHHHHHHHhCCCccceeeEecCCCCcceEEEEC---CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCc
Confidence            3468999999999988667778889999999999999985   68999998753 2456889999999998777899999


Q ss_pred             ceeccccCC--CceEEEEeeecCCCCC-------------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294          111 PFKVGALPT--GGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  175 (328)
Q Consensus       111 ~~~~~~~~~--~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~  175 (328)
                      ++..+....  +..|+||+|++|.++.             ....++|+.|++||+.+.+    |++..          .+
T Consensus        78 ~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~----~~~~~----------~~  143 (304)
T 3sg8_A           78 VVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINIS----GFKSN----------LV  143 (304)
T ss_dssp             EEEECCCCSSCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCT----TSCGG----------GB
T ss_pred             eEeecCCCCCCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCC----CCCcc----------ch
Confidence            998865422  4679999999998763             1357899999999998863    22110          12


Q ss_pred             cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHH-hhhhccCCCCCCceeccCCCCCCeeecC--CCCeEEEccc
Q 020294          176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN-LAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDPA  252 (328)
Q Consensus       176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~~~~~~LiHgDl~~~Nil~~~--~~~~~iID~~  252 (328)
                      .+.|..+...  .. .++.......+....+.+.+..+. +...... ..++++||||++++||++++  ++..+||||+
T Consensus       144 ~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~  219 (304)
T 3sg8_A          144 LDFREKINED--NK-KIKKLLSRELKGPQMKKVDDFYRDILENEIYF-KYYPCLIHNDFSSDHILFDTEKNTICGIIDFG  219 (304)
T ss_dssp             CCHHHHHHHH--HH-HHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGT-CCCCEEECSCCCGGGEEEETTTTEEEEECCCT
T ss_pred             hhHHHHHHHH--HH-HHHHHhcccCCcccHHHHHHHHHHHHhccccc-cCCceeEeCCCCcccEEEeCCCCCEEEEEeCC
Confidence            2344443321  11 112222111222222334444443 2322222 46789999999999999998  4457899995


Q ss_pred             -cccCCchhhhhhhhh--cCCC----hhhHHHHhhhCCCC-CCHHHHHHHHHHHHHH
Q 020294          253 -CYYGHNEAEFGMSWC--AGFG----GSFYNSYFEVMPKQ-PGFEKRRDLYMLYHYL  301 (328)
Q Consensus       253 -~~~G~p~~DLa~~~~--~~~~----~~f~~~Y~~~~pl~-~~~~~r~~ly~l~~~l  301 (328)
                       +.+|||++||+.+..  ..++    +.|+++|..   .+ +++.+|..+|..+..+
T Consensus       220 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~---~~~~~~~~r~~~~~~~~~l  273 (304)
T 3sg8_A          220 DAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH---KDIPTVLEKYRMKEKYWSF  273 (304)
T ss_dssp             TCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC---SCHHHHHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC---CCcHHHHHHHHHHHHHHHH
Confidence             689999999997642  2354    357777732   23 4778899888766443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=99.93  E-value=2e-26  Score=206.13  Aligned_cols=220  Identities=12%  Similarity=0.104  Sum_probs=144.2

Q ss_pred             eeeeeCCcccc-eeEEEEeCCc--cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           55 KICPVGGGCIN-LASRYGTDAG--SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        55 ~v~~i~~G~~n-~~y~v~~~~~--~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      +.+++++|.+| .+||++...+  +||||+.+......+.+|++.|++|+.  ++|||+|+..+.. ++..|+|||+++|
T Consensus        28 ~~~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~--~vPVP~v~~~~~~-~~~~~lvme~l~G  104 (272)
T 4gkh_A           28 RWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTA--FMPLPTIKHFIRT-PDDAWLLTTAIPG  104 (272)
T ss_dssp             EEEEEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTT--TSCCCCEEEEEEE-TTEEEEEEECCCS
T ss_pred             eEEEccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhcc--CCCcCeEEEEEEE-CCeEEEEEEeeCC
Confidence            46778888888 5899987543  899999986555678899999999986  5999999998765 5789999999999


Q ss_pred             CCCC-----------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCC
Q 020294          132 GSSR-----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG  200 (328)
Q Consensus       132 ~~~~-----------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~  200 (328)
                      .++.           ....++++.|++||..+.+.  +++..            ....+...... +........ ....
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~--~~~~~------------~~~~~~~~~~~-~~~~~~~~~-~~~~  168 (272)
T 4gkh_A          105 KTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCN--CPFNS------------DRVFRLAQAQS-RMNNGLVDA-SDFD  168 (272)
T ss_dssp             EEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGG--CCBBC------------CHHHHHHHHHH-HHHTTCCCG-GGCC
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHhcCCCccc--CCcCc------------ccccchhhHHH-HHHHhhhhh-hhcc
Confidence            7631           23578999999999987632  22110            00000000000 000000000 0000


Q ss_pred             ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh--cCCC----hh
Q 020294          201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC--AGFG----GS  273 (328)
Q Consensus       201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~--~~~~----~~  273 (328)
                      ........+++.+.+...... ..++++||||||++|||+++++.++||||+ +++|||++||++++.  ..+.    +.
T Consensus       169 ~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~  247 (272)
T 4gkh_A          169 DERNGWPVEQVWKEMHKLLPF-SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKR  247 (272)
T ss_dssp             GGGTTCCHHHHHHHHHTTCCC-CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEETHHHHHHHHHHHTTTCHHHHHH
T ss_pred             ccccchHHHHHHHHHHhcccc-cCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCHHHHHHHHHHHhhhcCHHHHHH
Confidence            000111223334434333333 467899999999999999988778999985 689999999998742  3333    56


Q ss_pred             hHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          274 FYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       274 f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      |+++|....+    ..+|+.+|+++
T Consensus       248 fl~~Yg~~~~----d~~rl~~Y~lL  268 (272)
T 4gkh_A          248 LFQKYGIDNP----DMNKLQFHLML  268 (272)
T ss_dssp             HHHHHTCSSC----CHHHHHHHHHH
T ss_pred             HHHHcCCCCC----CHHHHHHHHHH
Confidence            8888864332    25789999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=99.93  E-value=2e-25  Score=205.69  Aligned_cols=251  Identities=16%  Similarity=0.158  Sum_probs=159.4

Q ss_pred             ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      +.+++.++|.+. .+..+.++++++||..|.+|++++++++||||+.+.. ...+..|.+++++|++. +++||+++...
T Consensus        18 ~~~~l~~~l~~~-~~~~~~~~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~-~~~~~~e~~~l~~L~~~-g~~vp~~~~~~   94 (346)
T 2q83_A           18 KLTELAENVLQG-WDVQAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRP-EKKALFSIFAQDYLAKK-GMNVPGILPNK   94 (346)
T ss_dssp             HHHHHHHHHGGG-SCCCCCEEEECC----CEEEEEEETTEEEEEEEECSC-HHHHHHHHHHHHHHHHH-TCSSCCBCCCT
T ss_pred             HHHHHHHHHHHH-cCCceEEeeeccccccCcEEEEEeCCCCEEEEecCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecC
Confidence            456688888665 3446889999988899999999999899999999753 34566789999999987 68999999753


Q ss_pred             cc-----CCCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHh
Q 020294          116 AL-----PTGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH  186 (328)
Q Consensus       116 ~~-----~~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~  186 (328)
                      ..     ..+..+++|+|++|..+.    ....++|+.||+||.....   +..+..     .+. ......|.+.+...
T Consensus        95 ~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~~-----~~~-~~~~~~~~~~~~~~  165 (346)
T 2q83_A           95 KGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVG---YQPPNG-----VPI-FTKLGRWPNHYTKR  165 (346)
T ss_dssp             TSCSCEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTT---CCCCTT-----CCC-CBCTTCHHHHHHHH
T ss_pred             CCCEEEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCC---CCCCcc-----chh-cccccchHHHHHHH
Confidence            21     146789999999998653    3578999999999998763   221110     000 01113454444321


Q ss_pred             --hhHHHHHHHHhhCCCh---H-------HHHHHHHHHHHhhh-----hccCCCCCCceeccCCCCCCeeecCCCCeEEE
Q 020294          187 --RLGYQLKLALDQYGDS---T-------IYQRGHRLMKNLAP-----LFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL  249 (328)
Q Consensus       187 --~l~~~~~~~~~~~~~~---~-------~~~~~~~~~~~l~~-----~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iI  249 (328)
                        .+....+.......+.   .       ..+.+++.++.+..     +......+.++||||+|++|||+++++.++||
T Consensus       166 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lI  245 (346)
T 2q83_A          166 CKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVI  245 (346)
T ss_dssp             HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEEC
T ss_pred             HHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEE
Confidence              1111111111000000   0       01112222222221     10000136799999999999999767778999


Q ss_pred             ccc-cccCCchhhhhhhh---h---cCCC----hhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          250 DPA-CYYGHNEAEFGMSW---C---AGFG----GSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       250 D~~-~~~G~p~~DLa~~~---~---~~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      ||+ +++|+|++||+.+.   +   ..++    +.|+++|.+..|+++...+++..|.++
T Consensus       246 Dfe~a~~g~~~~Dla~~l~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~~~  305 (346)
T 2q83_A          246 DLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLF  305 (346)
T ss_dssp             CCTTCEECCTHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHS
T ss_pred             ehhhcccCChHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHC
Confidence            995 67999999999762   2   2343    579999999999986655555555444

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=99.93  E-value=3.9e-25  Score=203.24  Aligned_cols=247  Identities=15%  Similarity=0.154  Sum_probs=169.4

Q ss_pred             hhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCC
Q 020294           31 AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        31 ~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~  107 (328)
                      .++.++.+.|.++|.++|.... .++++++ |..|.+|++++++| +||+|++++.  ....+..|++++++|++. +++
T Consensus         7 ~~~~l~~~~i~~~l~~~g~~~~-~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~-g~~   83 (328)
T 1zyl_A            7 TFQTLHPDTIMDALFEHGIRVD-SGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVND-EVP   83 (328)
T ss_dssp             CCCCCCHHHHHHHHHHTTCCCC-SCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT-TCS
T ss_pred             CCCCCCHHHHHHHHHHcCCCCC-ceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHc-CCe
Confidence            3677899999999987765322 3677787 88999999998777 7999998742  356688899999999987 799


Q ss_pred             cccceec-cccC---CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccH
Q 020294          108 APRPFKV-GALP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW  179 (328)
Q Consensus       108 VP~~~~~-~~~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w  179 (328)
                      ||+++.. +..-   +|..+++|+|++|..+.    ...+++|+.|++||.....   +.+..         ...|  ++
T Consensus        84 vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~---------~~~~--~~  149 (328)
T 1zyl_A           84 VAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRK---QLFIH---------RPTI--GL  149 (328)
T ss_dssp             BCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTS---SCCSS---------SCBC--SH
T ss_pred             ecceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhcc---CCCcc---------CCCC--CH
Confidence            9999986 2211   46778999999998653    3578999999999998863   21110         0111  23


Q ss_pred             HHHHHHhhhHHHHHHHHhhCCCh----HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccc
Q 020294          180 IEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACY  254 (328)
Q Consensus       180 ~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~  254 (328)
                      ..+...  ....++.  ....+.    ...+.++++++.+...+.. ..+.++||||+|++|||++ + .++|||| .++
T Consensus       150 ~~~~~~--~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          150 NEYLIE--PRKLFED--ATLIPSGLKAAFLKATDELIAAVTAHWRE-DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             HHHTHH--HHHHHHT--CSSSCTTTHHHHHHHHHHHHHHHHHHCCS-CSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             HHHHhh--HHHHHhh--cCcCCHHHHHHHHHHHHHHHHHHHHHhhh-cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            333211  1111111  001121    1233444555555555543 2578999999999999998 4 6899999 578


Q ss_pred             cCCchhhhhhhhhcC------CChhhHHHHhhhCCCCCCHHHHHHHHHHHHHH
Q 020294          255 YGHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYL  301 (328)
Q Consensus       255 ~G~p~~DLa~~~~~~------~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l  301 (328)
                      +|++.+||+++....      ..+.|+++|.+..++++...+++..+.....+
T Consensus       223 ~g~~~~Dla~~l~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~~~r~l  275 (328)
T 1zyl_A          223 NGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLV  275 (328)
T ss_dssp             EECTTHHHHTTCCSSHHHHHHHHHHHHHHHTTTSCCCGGGGGGHHHHHHHHHH
T ss_pred             cCcHHHHHHHHhcCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            999999999764321      12479999999999886655666666544433

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=99.93  E-value=4.4e-25  Score=204.40  Aligned_cols=257  Identities=16%  Similarity=0.141  Sum_probs=163.3

Q ss_pred             cCChhHHHHHHHhcCCCcceeeeeeeCCcc--cceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-ccc
Q 020294           34 ALSDDPIREWILSEGKATHITKICPVGGGC--INLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APR  110 (328)
Q Consensus        34 ~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~--~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~-VP~  110 (328)
                      .++.++|.+++.+. .+..+.+++++.+|.  .|.+|+|++++|+||||+++...   ...|.+++++|++. +++ ||+
T Consensus         5 ~l~~~~l~~~l~~~-ygl~~~~~~~l~~G~g~~N~vy~v~~~~g~~vLK~~~~~~---~~~E~~~l~~L~~~-g~~~vp~   79 (339)
T 3i1a_A            5 PIQAQQLIELLKVH-YGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH---DEINLSIIRLLHDS-GIKEIIF   79 (339)
T ss_dssp             SSCTTHHHHHHHHH-HCCCCSEEEEETTTSCSSCEEEEEECSSCEEEEEEEECSS---CCHHHHHHHHHHHT-TCCSSCC
T ss_pred             CCCHHHHHHHHHHH-cCCCcceeEEeeccCccccceEEEEeCCCCEEEEEecCcc---chHHHHHHHHHHhc-CCccccc
Confidence            46889999998776 233466777775554  89999999988899999987643   25789999999986 799 999


Q ss_pred             ceeccccC-----CCceEEEEeeecCCCCC------ccHHHHHHHHHHHHhcCCCCCC-CCCCCCCcccccccCCCCccc
Q 020294          111 PFKVGALP-----TGGSYIIMEFIEFGSSR------GNQSVFGKKLAEMHKAGKSSKG-FGFDVDNTIGSTPQINKWTSN  178 (328)
Q Consensus       111 ~~~~~~~~-----~~~~~~v~e~l~G~~~~------~~~~~lg~~La~lH~~~~~~~~-~g~~~~~~~g~~~~~~~~~~~  178 (328)
                      |+......     .+..+++|+|++|....      ..+.++|+.||+||....+... ++.+...      ....|...
T Consensus        80 pi~~~~G~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~~lg~~La~LH~~~~~~~~~~~~~~~~------~~~~w~~~  153 (339)
T 3i1a_A           80 PIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEI------YSPKWREI  153 (339)
T ss_dssp             CCCCTTSCSSEECSSEEEEEEECCCCCBTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTSEECC------CCCHHHHH
T ss_pred             ceecCCCCEEEEECCEEEEEEeccCCCcCcccCCCHHHHHHHHHHHHHHhCcCCCCCCccCccccc------cCcchHHH
Confidence            99864321     46789999999998652      3468999999999999863210 1111000      01112111


Q ss_pred             HHHHHHHhh-------hHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc
Q 020294          179 WIEFYAEHR-------LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP  251 (328)
Q Consensus       179 w~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~  251 (328)
                      +..++....       +.......... ....+...++++. .+...+.....+.++||||++++||++++++.++||||
T Consensus       154 i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~l~~~l~~~~~~~~~~HgD~~~~N~l~~~~~~~~~iD~  231 (339)
T 3i1a_A          154 VRSFYNQIEFDNSDDKLTAAFKSFFNQ-NSAAIHRLVDTSE-KLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDW  231 (339)
T ss_dssp             HHHHGGGGSCCTTCCHHHHHHHHHHHH-THHHHHHHHHHHH-HHHHHCCCCGGGCEEECSCCCGGGEEECGGGCEEECCC
T ss_pred             HHHHHHhhhccccCCcHHHHHHHHHHH-hHHHHHHHHHHHH-HHHHHHhhCCCCceeEeCCCCcCCEEEeCCCeEEEEEC
Confidence            111111000       00000000000 0000111111111 12222332235779999999999999987777899999


Q ss_pred             c-cccCCchhhhhhhhh--c--CCC----hhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 020294          252 A-CYYGHNEAEFGMSWC--A--GFG----GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF  307 (328)
Q Consensus       252 ~-~~~G~p~~DLa~~~~--~--~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~  307 (328)
                      + +.+|+|++||+++..  .  +..    +.|+++|... ..  + .+++.+|+++..+..+..|
T Consensus       232 e~~~~~~~~~Dla~~~~~~~~~~~~~~~~~~fl~~Y~~~-~~--d-~~~l~~y~~~r~l~~~~~~  292 (339)
T 3i1a_A          232 DEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEI-NV--D-KTILSYYRHERIVEDIAVY  292 (339)
T ss_dssp             SSCEEECTHHHHTTTTCCTTSCSCCHHHHHHHHHHHCCC-CC--C-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeCCHHHHHHHHHhhhhhccCCHHHHHHHHHHhCCC-CC--C-HHHhHHHHHHHHHHHHHHH
Confidence            5 689999999998632  1  111    3699999865 22  3 4679999988888777755

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.91  E-value=5.7e-24  Score=188.23  Aligned_cols=215  Identities=15%  Similarity=0.146  Sum_probs=145.1

Q ss_pred             eeeeeC-CcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           55 KICPVG-GGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        55 ~v~~i~-~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++++++ ||..|.+|++++++| ++|+|+.+......+..|+++++.|++. +++||+++..+.. .+..++||||++|.
T Consensus        23 ~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~-~~~vP~~~~~~~~-~~~~~~v~e~i~G~  100 (264)
T 1nd4_A           23 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATT-GVPCAAVLDVVTE-AGRDWLLLGEVPGQ  100 (264)
T ss_dssp             EEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTT-TCCBCCEEEEEEC-SSCEEEEEECCSSE
T ss_pred             ceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhC-CCCCCeEEEeccC-CCCCEEEEEecCCc
Confidence            456665 677899999988765 7999998765446688999999999987 8999999988764 46789999999998


Q ss_pred             CCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH--
Q 020294          133 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST--  203 (328)
Q Consensus       133 ~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~--  203 (328)
                      ++.       ....++|+.|++||+...+.  +.+                ..|...... .....+   .....+.+  
T Consensus       101 ~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~~----------------~~~~~~~~~-~~~~~~---~~~~~~~~~~  158 (264)
T 1nd4_A          101 DLLSSHLAPAEKVSIMADAMRRLHTLDPAT--CPF----------------DHQAKHRIE-RARTRM---EAGLVDQDDL  158 (264)
T ss_dssp             ETTTSCCCHHHHHHHHHHHHHHHTTSCGGG--CCC----------------BCCHHHHHH-HHHHHH---HTTCCCTTSC
T ss_pred             ccCcCcCCHhHHHHHHHHHHHHHhCCCCCC--CCC----------------chHHHHHHH-HHHHHH---hcCCccchhh
Confidence            764       35688999999999977521  110                011111110 111111   11111110  


Q ss_pred             ----HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh-h-c-CC----C
Q 020294          204 ----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW-C-A-GF----G  271 (328)
Q Consensus       204 ----~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~-~-~-~~----~  271 (328)
                          ....++++.+.+...+.. ..++++||||++++||++++++.++||||+ +++|+|.+|++.+. + . .+    .
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~Dla~~~~~~~~~~~~~~~  237 (264)
T 1nd4_A          159 DEEHQGLAPAELFARLKARMPD-GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWA  237 (264)
T ss_dssp             CGGGTTCCHHHHHHHHHHTCCS-SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHHHHHHHHCHHHH
T ss_pred             hhhccCccHHHHHHHHHHhcCC-CCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCChHHHHHHHHhhhhhhcCcHHH
Confidence                001233334444333333 357899999999999999877666899995 68999999999763 1 1 22    2


Q ss_pred             hhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          272 GSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       272 ~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      +.|+++|. ..+.+   .+|+.+|+++
T Consensus       238 ~~fl~~Y~-~~~~~---~~r~~~y~~l  260 (264)
T 1nd4_A          238 DRFLVLYG-IAAPD---SQRIAFYRLL  260 (264)
T ss_dssp             HHHHHHHT-CSSCC---HHHHHHHHHH
T ss_pred             HHHHHHhc-CcCCC---HHHHHHHHHH
Confidence            57999996 33333   6789998765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.91  E-value=2.1e-23  Score=192.31  Aligned_cols=224  Identities=12%  Similarity=0.047  Sum_probs=143.3

Q ss_pred             ChhHHHHHHHhcCCCcceeeeeeeCCcccce-eEEEEeC-CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCccccee
Q 020294           36 SDDPIREWILSEGKATHITKICPVGGGCINL-ASRYGTD-AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~-~y~v~~~-~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      ..+.+++||.+.+  ..+.++++++||.+|. +|+++++ +++||+|..++.....+..|++++++|++. +++||+++.
T Consensus         5 ~~~~l~~~l~~~~--~~~~~~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~-g~~vP~v~~   81 (333)
T 3csv_A            5 REDEIRDFLATHG--YADWNRTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNL-DISAPEIYA   81 (333)
T ss_dssp             HHHHHHHHHHHTT--CTTCEECC--------CCEEEECTTCCEEEEEECCTTTTCCSHHHHHHHHHHHHT-TCBCCCEEE
T ss_pred             HHHHHHHHHHhcC--CCCceeeECCCCCCCceEEEEEcCCCCeEEEEECCCCCCccccHHHHHHHHHHhC-CCCCCceee
Confidence            3567999998884  3568899999999997 7799885 569999988754335678899999999987 799999999


Q ss_pred             ccccCCCceEEEEeeecCCCCC-----------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHH
Q 020294          114 VGALPTGGSYIIMEFIEFGSSR-----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF  182 (328)
Q Consensus       114 ~~~~~~~~~~~v~e~l~G~~~~-----------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~  182 (328)
                      .+..   ..+++||+++|....           ....++|+.|++||..+.+    +++.  +....  .......|.++
T Consensus        82 ~d~~---~g~ll~e~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~----~~~~--~~~~~--~~~~~~~~~~~  150 (333)
T 3csv_A           82 EEHA---RGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTP----ELAR--LDPET--LSEMTRLAFSE  150 (333)
T ss_dssp             EETT---TTEEEECCCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCC----CCCB--CCHHH--HHHTTTHHHHT
T ss_pred             ecCC---CCEEEEeeCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCc----cCCc--cCHHH--HHHHHHHHHHH
Confidence            7642   238999999885431           2457899999999998763    1110  00000  00001112222


Q ss_pred             HHHhhhHHHHHHHHhhCCC-hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC----CCeEEEcc-ccccC
Q 020294          183 YAEHRLGYQLKLALDQYGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYG  256 (328)
Q Consensus       183 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~----~~~~iID~-~~~~G  256 (328)
                      +....+          ... ....+.+++.++.+.+.+.  ..++++||||+|++|||++++    +.++|||| .+++|
T Consensus       151 ~~~~~l----------~~~~~~~~~~l~~~~~~l~~~~~--~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          151 YRYAIL----------GDAAEDNRKRFEHRFAQILSAQL--EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHHHHH----------SSCCHHHHHHHHHHHHHHHHHHC--CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             HHHHhc----------CCCcHHHHHHHHHHHHHHHHhcc--cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            211000          000 1112334444444333233  246799999999999999874    56899998 57899


Q ss_pred             Cchhhhhhhhh---cCCC----hhhHHHHhhhCCCC
Q 020294          257 HNEAEFGMSWC---AGFG----GSFYNSYFEVMPKQ  285 (328)
Q Consensus       257 ~p~~DLa~~~~---~~~~----~~f~~~Y~~~~pl~  285 (328)
                      +|.+||+.+..   ..+.    +.|+++|.+..+++
T Consensus       219 ~~~~DLa~ll~~~~~~~~~~~~~~~l~~Y~~~~~~~  254 (333)
T 3csv_A          219 HRAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVD  254 (333)
T ss_dssp             CTTHHHHHHHSCTTSCCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHhhcccccCCHHHHHHHHHHHHHHcCCC
Confidence            99999997642   2232    57999999998886

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=99.90  E-value=2.7e-22  Score=182.41  Aligned_cols=253  Identities=15%  Similarity=0.128  Sum_probs=161.7

Q ss_pred             HHHHHHHhcC-CCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           39 PIREWILSEG-KATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        39 ~i~~~l~~~~-~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      .+++.+.+.+ +. ....++++++|.+|.+|++    ++||+|+++....  ...+.|+++++.|++. +++ |+++..+
T Consensus         6 ~~~~~i~~~p~l~-~~~~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~-g~~-P~~~~~~   78 (301)
T 3dxq_A            6 EARAKLAAIPMLA-GYTGPLERLGGLTNLVFRA----GDLCLRIPGKGTEEYINRANEAVAAREAAKA-GVS-PEVLHVD   78 (301)
T ss_dssp             HHHHHTTTCTTTT-TCCSCEEEESCSSEEEEEE----TTEEEEEECC----CCCHHHHHHHHHHHHHT-TSS-CCEEEEC
T ss_pred             HHHHHHHhCCccc-cccceeEcCCcccccccee----eeEEEECCCCCccceeCHHHHHHHHHHHHHc-CCC-CceEEEE
Confidence            5666676662 22 3455999999999999999    7899999975322  2346899999999987 677 9999876


Q ss_pred             ccCCCceEEEEeee-cCCCCC--------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHh
Q 020294          116 ALPTGGSYIIMEFI-EFGSSR--------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH  186 (328)
Q Consensus       116 ~~~~~~~~~v~e~l-~G~~~~--------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~  186 (328)
                      .   +..+++++|+ +|.++.        .....+|+.|++||+....   ++..             + .-|      .
T Consensus        79 ~---~~~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~---~~~~-------------~-~~~------~  132 (301)
T 3dxq_A           79 P---ATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAV---FPFR-------------F-ELF------A  132 (301)
T ss_dssp             T---TTCCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCC---CSSB-------------C-CHH------H
T ss_pred             C---CCCEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCC---CCCC-------------C-CHH------H
Confidence            4   3568999999 887653        2368899999999997642   2210             0 001      1


Q ss_pred             hhHHHHHHHHhhCC-ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 020294          187 RLGYQLKLALDQYG-DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM  264 (328)
Q Consensus       187 ~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~  264 (328)
                      ++..+.+....... .+...+.+.+.++.+...+.....++++||||++++||+. +++.+++|||+ +++|+|.+||+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil~-~~~~~~lID~e~a~~g~~~~Dla~  211 (301)
T 3dxq_A          133 MIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLD-TGERMWIVDWEYSGMNDPLWDLGD  211 (301)
T ss_dssp             HHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEEE-CSSCEEECCCTTCEEECTHHHHHH
T ss_pred             HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEEE-CCCCEEEEecccccCCCHHHHHHH
Confidence            23333322222111 1111233344444444443322467899999999999995 44557999985 789999999998


Q ss_pred             hhh-cCCC----hhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh------cc---CcHHHHHHHHHHHHHHh
Q 020294          265 SWC-AGFG----GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF------GS---GYRSSALSIIDDYLRML  326 (328)
Q Consensus       265 ~~~-~~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~------~~---~y~~~~~~~~~~~~~~~  326 (328)
                      +.+ ..++    +.|+++|.+..+. +...+++..|.+...+.+..+.      +.   .|..-+..=++++.+.+
T Consensus       212 ~~~~~~~~~~~~~~~l~~Y~~~~~~-~~~~~~~~~~~~~~~~~w~~W~~~q~~~~~~~~d~~~ya~~r~~~~~~~~  286 (301)
T 3dxq_A          212 LSVEGKFNANQDEELMRAYFGGEAR-PAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKALM  286 (301)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHh
Confidence            643 4454    4799999887643 3335667777655443332211      21   35555555555555443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.89  E-value=5.5e-23  Score=182.88  Aligned_cols=211  Identities=14%  Similarity=0.113  Sum_probs=139.2

Q ss_pred             eCCcccceeEEEEeCCccEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC
Q 020294           59 VGGGCINLASRYGTDAGSFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR  135 (328)
Q Consensus        59 i~~G~~n~~y~v~~~~~~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~  135 (328)
                      .++|..|.+|+++++++.+|+|+.+.   .....+++|++++++|++  +++||+++..+.. .+..|+||||++|.++.
T Consensus        22 ~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~--~~~vP~v~~~~~~-~~~~~lv~e~i~G~~l~   98 (263)
T 3tm0_A           22 TEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG--KLPVPKVLHFERH-DGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             CSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT--TSCCCCEEEEEEE-TTEEEEEEECCSSEEHH
T ss_pred             ccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc--CCCCCeEEEEEec-CCceEEEEEecCCeehh
Confidence            35566789999998878999999874   335568999999999987  5899999988765 57899999999998641


Q ss_pred             ----------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhC-----C
Q 020294          136 ----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-----G  200 (328)
Q Consensus       136 ----------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~-----~  200 (328)
                                ....++|+.|++||+.+...  .++                ..|...... +............     .
T Consensus        99 ~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~--~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           99 EEYEDEQSPEKIIELYAECIRLFHSIDISD--CPY----------------TNSLDSRLA-ELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             HHCCTTTCHHHHHHHHHHHHHHHHHSCCTT--CSC----------------BCCHHHHHH-HHHHHHHTTCSCCSGGGGS
T ss_pred             hccCCcccHHHHHHHHHHHHHHHhCCCccc--CCC----------------cchHHHHHH-HHHHHHhcccccccccccc
Confidence                      23588999999999977531  111                011111110 0111110000000     0


Q ss_pred             ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh-hh--cC-----CC
Q 020294          201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS-WC--AG-----FG  271 (328)
Q Consensus       201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~-~~--~~-----~~  271 (328)
                      +.......+++.+.+.....  ..++++|||||+++|||+++++.++||||+ +.+|||.+||+.+ ++  ..     +.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~--~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~~Dla~~~~~~~~~~~~~~~~  237 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKP--EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYV  237 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCC--CCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEEHHHHHHHHHHHHHHHTCCTHHH
T ss_pred             ccccCCCHHHHHHHHHhcCC--CCCceEECCCCCcCcEEEECCcEEEEEEchhcccCCHHHHHHHHHHHhhhccCcHHHH
Confidence            00000112333444433333  257899999999999999876667899995 6899999999976 22  12     33


Q ss_pred             hhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          272 GSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       272 ~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      +.|+++|..  +.+   .+++.+|.++
T Consensus       238 ~~~~~~Y~~--~~d---~~~~~~~~~l  259 (263)
T 3tm0_A          238 ELFFDLLGI--KPD---WEKIKYYILL  259 (263)
T ss_dssp             HHHHHHHTS--CCC---HHHHHHHHHH
T ss_pred             HHHHHHhCC--CCC---HHHHHHHHHH
Confidence            579999985  222   4788888764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=99.88  E-value=1.1e-22  Score=193.50  Aligned_cols=220  Identities=18%  Similarity=0.172  Sum_probs=143.3

Q ss_pred             hhhhhcCChhHHHHHHH---hcC---CCc---ceeeeeeeCCcccceeEEEEeCCccEEEEecCC-------C---Ccch
Q 020294           29 TFAMAALSDDPIREWIL---SEG---KAT---HITKICPVGGGCINLASRYGTDAGSFFVKTNRS-------I---GPSM   89 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~---~~~---~~~---~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-------~---~~~~   89 (328)
                      |++|+.++.+.|.+|+.   ..+   ...   ...+++++++|..|.+|+++.++++||||...+       .   ....
T Consensus         3 ~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~   82 (420)
T 2pyw_A            3 FEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKER   82 (420)
T ss_dssp             CCSCCCCCTTHHHHHHHTCHHHHHHHTTTTCCCCCEEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTH
T ss_pred             ccccccCChhhHHHHHhchhhhhhhcCCcccccceEEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhH
Confidence            78899999999999999   321   222   457899999999999999987767999994322       0   1133


Q ss_pred             HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee-cCCC-----------CCccHHHHHHHHHHHHhcCCCC--
Q 020294           90 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI-EFGS-----------SRGNQSVFGKKLAEMHKAGKSS--  155 (328)
Q Consensus        90 ~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l-~G~~-----------~~~~~~~lg~~La~lH~~~~~~--  155 (328)
                      ...|.+++..++...+++||+++..+   .+..++||||+ +|..           ....++.+|+.||++|......  
T Consensus        83 ~~~E~e~l~~~~~~~~~~vP~v~~~~---~~~~~lv~e~l~~g~~~l~~~l~~~~~~~~~~~~lg~~La~lH~~~~~~~~  159 (420)
T 2pyw_A           83 AYFEATTLRKHGNLSPDHVPEVYHFD---RTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYH  159 (420)
T ss_dssp             HHHHHHHHHHHHHHSGGGSCCEEEEE---TTTTEEEECCCCTTCEEHHHHHHHTCCCTTHHHHHHHHHHHHHHTTSTTTS
T ss_pred             HHHHHHHHHHHHhhCCCCCCeEEEEC---CCccEEEEeecCCcchhHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccccc
Confidence            45577777777765568999999987   36789999999 8821           1246899999999999887521  


Q ss_pred             ---------CCCCCCC------CCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhcc
Q 020294          156 ---------KGFGFDV------DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFE  220 (328)
Q Consensus       156 ---------~~~g~~~------~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  220 (328)
                               ..||+..      ....+..|+.+.|...|..    ..+.......   ..+..+...++++.+.+..   
T Consensus       160 ~~~~~~~~~~~fg~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~l---~~~~~l~~~~~~l~~~~~~---  229 (420)
T 2pyw_A          160 DTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNRWTS----PYLDDDAKAV---REDSALKLEIAELKSMFCE---  229 (420)
T ss_dssp             CHHHHHHHHHHHGGGHHHHHHHHHHTTTGGGSCCTTCCCST----TTTHHHHHHH---TTCHHHHHHHHHHHHHHHH---
T ss_pred             ChhhhHHHHHhcCCCHHHHHhhhhhcccccccccccccCCc----HhHHHHHHHh---hcCHHHHHHHHHHHHHHhc---
Confidence                     0122111      0011222333333333320    0011100000   0122222333333332221   


Q ss_pred             CCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       221 ~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                         .+++|||||||++|||+++++ ++||||+ +++|+|.+||+.+
T Consensus       230 ---~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~  271 (420)
T 2pyw_A          230 ---RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAY  271 (420)
T ss_dssp             ---BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHH
T ss_pred             ---CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHH
Confidence               367999999999999998776 8999994 7899999999975

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=99.86  E-value=5.1e-21  Score=182.48  Aligned_cols=217  Identities=17%  Similarity=0.141  Sum_probs=141.6

Q ss_pred             hHHHHHHHhc-CCC-----cceeeeeeeCCcccceeEEEEeCC---------ccEEEEecCCCCc-chHHHHHHHHHHHH
Q 020294           38 DPIREWILSE-GKA-----THITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIGP-SMFEGEALGLGAMY  101 (328)
Q Consensus        38 ~~i~~~l~~~-~~~-----~~i~~v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~~-~~~~~E~~~l~~L~  101 (328)
                      +.+++++.++ +..     ....++++++||.+|.+|+|++++         +++|||++..... +.+..|..+++.|+
T Consensus        54 ~~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~  133 (429)
T 1nw1_A           54 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS  133 (429)
T ss_dssp             HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHH
Confidence            4566666653 322     246789999999999999999753         5899999965222 45668999999999


Q ss_pred             hcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCC
Q 020294          102 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  174 (328)
Q Consensus       102 ~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~  174 (328)
                      +. ++ +|+++.....     .+|++|++|..+.       .....+|+.|++||....+   ++.        .|  + 
T Consensus       134 ~~-g~-~P~l~~~~~~-----g~v~e~l~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~---~~~--------~~--~-  192 (429)
T 1nw1_A          134 ER-HL-GPKLYGIFSG-----GRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVP---IWK--------EP--D-  192 (429)
T ss_dssp             HT-TS-SSCEEEEETT-----EEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCS---SCC--------SS--C-
T ss_pred             hC-CC-CCcEEEEeCC-----CEEEEEeCCcccChhhcCCHHHHHHHHHHHHHHhCCccc---cCC--------Cc--c-
Confidence            86 55 7999876531     4999999997653       2367999999999997642   110        00  0 


Q ss_pred             CcccHHHHHHHhhhHHHHHHHHhhCC-------------ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec
Q 020294          175 WTSNWIEFYAEHRLGYQLKLALDQYG-------------DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD  241 (328)
Q Consensus       175 ~~~~w~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~  241 (328)
                      |  -|.      .+..+++.......             .......+.+.++.+...+.....+.++||||++++|||++
T Consensus       193 ~--~~~------~i~~w~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~v~~H~Dl~~gNiL~~  264 (429)
T 1nw1_A          193 Y--LCE------ALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP  264 (429)
T ss_dssp             H--HHH------HHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEE
T ss_pred             h--HHH------HHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHhccccCCCeEEEeCCCCCCeEEee
Confidence            0  011      11112211111100             00011233444444444443324578999999999999998


Q ss_pred             CC----------------------------CCeEEEcc-ccccCCchhhhhhhhh---c--------C-------C-C--
Q 020294          242 KN----------------------------GEPVILDP-ACYYGHNEAEFGMSWC---A--------G-------F-G--  271 (328)
Q Consensus       242 ~~----------------------------~~~~iID~-~~~~G~p~~DLa~~~~---~--------~-------~-~--  271 (328)
                      ++                            +.++|||| .+++|+|.+|||..++   .        +       + +  
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p~~DLA~~~~e~~~~~~~~~~p~~~~~~~~~p~~~  344 (429)
T 1nw1_A          265 KASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPEND  344 (429)
T ss_dssp             C------------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHH
T ss_pred             CCccccccccccccccccccccccccccCCCeEEEEecccCCcCccHHHHHHHHHHHhcccCCccCCCcccCcccCcCHH
Confidence            75                            56799999 5789999999996532   1        1       1 2  


Q ss_pred             --hhhHHHHhhhCC
Q 020294          272 --GSFYNSYFEVMP  283 (328)
Q Consensus       272 --~~f~~~Y~~~~p  283 (328)
                        ..|+++|.+..+
T Consensus       345 ~~~~fl~~Y~~~~~  358 (429)
T 1nw1_A          345 QMLEFFLNYLREQG  358 (429)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcC
Confidence              479999988765

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=99.86  E-value=8e-21  Score=180.15  Aligned_cols=209  Identities=13%  Similarity=0.008  Sum_probs=136.0

Q ss_pred             hcCChhHHHHHHHhcCCCc-----ceeeeeeeCCcccceeEEEEeC---------CccEEEEecCCCCc--chHHHHHHH
Q 020294           33 AALSDDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSIGP--SMFEGEALG   96 (328)
Q Consensus        33 ~~~~~~~i~~~l~~~~~~~-----~i~~v~~i~~G~~n~~y~v~~~---------~~~~vlK~~~~~~~--~~~~~E~~~   96 (328)
                      +.++.+.+.+++....++.     .+.++++++||.+|.+|+++++         .++||+|+++....  -..++|.++
T Consensus        47 ~~~d~~~l~~l~~~~~p~w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~  126 (424)
T 3mes_A           47 TITDTEIIIGICRKNIPGWKEINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDV  126 (424)
T ss_dssp             ---CHHHHHHHHHHHSTTCTTCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHcCccccCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHH
Confidence            4578899999998874432     4688999999999999999987         46899999875332  224689999


Q ss_pred             HHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 020294           97 LGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST  169 (328)
Q Consensus        97 l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~  169 (328)
                      ++.|++. ++ +|+++...     ..+.||+||+|..+.       ....++++.|++||+......  +++..  .+..
T Consensus       127 l~~L~~~-gi-~P~l~~~~-----~~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~--~L~~~--~~~~  195 (424)
T 3mes_A          127 FRYLSNI-NI-APNIIADF-----PEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRA--DFPSR--FDKE  195 (424)
T ss_dssp             HHHHHHT-TS-SCCEEEEE-----TTEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCT--TSCTT--SCCS
T ss_pred             HHHHHhc-CC-CCCEEEEc-----CCCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhc--cCccc--cCCC
Confidence            9999986 56 89999754     248999999998653       246899999999999876321  11110  0011


Q ss_pred             ccCCCCcccHHHHHHHhhhHHHHHHHHhhC--C----C----hHHHHHHHHHHHHhhhh------------ccCCCCCCc
Q 020294          170 PQINKWTSNWIEFYAEHRLGYQLKLALDQY--G----D----STIYQRGHRLMKNLAPL------------FEGVNVEPC  227 (328)
Q Consensus       170 ~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~--~----~----~~~~~~~~~~~~~l~~~------------l~~~~~~~~  227 (328)
                      |  +    -|.      ++..+.+......  .    .    +.+...++.+.+.++..            ......+.+
T Consensus       196 p--~----~~~------~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~  263 (424)
T 3mes_A          196 P--I----LFK------RIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLV  263 (424)
T ss_dssp             C--C----HHH------HHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEE
T ss_pred             C--c----HHH------HHHHHHHHHHHhhcccchhhccccHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCce
Confidence            1  0    111      1222221111110  0    0    11222233333333211            001135789


Q ss_pred             eeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          228 LLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       228 LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      +||||++++||+ ++++...||||+ +++|+|.+|||..
T Consensus       264 ~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~~Dla~~  301 (424)
T 3mes_A          264 FAHNDLQENNLL-QTQNNIRMIDYEYSAINFAGADIANY  301 (424)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEEEEHHHHHHHH
T ss_pred             EECCCCCcccee-cCCCcEEEEecccCCcCChHHHHHHH
Confidence            999999999999 666778999995 7899999999965

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=99.86  E-value=6.6e-21  Score=178.09  Aligned_cols=207  Identities=11%  Similarity=0.038  Sum_probs=131.4

Q ss_pred             cCChhHHHHHHHhc-----CCCcceeeeeeeCCcccceeEEEEeCC----------ccEEEEecCCCCcc--hHHHHHHH
Q 020294           34 ALSDDPIREWILSE-----GKATHITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPS--MFEGEALG   96 (328)
Q Consensus        34 ~~~~~~i~~~l~~~-----~~~~~i~~v~~i~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~--~~~~E~~~   96 (328)
                      .++.+.+.+++...     +.+....+++++++|.+|.+|+|++++          ++||+|+++.....  ....|.++
T Consensus        11 ~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~   90 (369)
T 3c5i_A           11 LTDPLYIKKICLEKVPEWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEV   90 (369)
T ss_dssp             CCCHHHHHHHHHHHCGGGTTCCGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHH
T ss_pred             cCCHHHHHHHHHHHCCCCCCCCcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHH
Confidence            46777788888776     333355789999999999999999875          58999998754322  24789999


Q ss_pred             HHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 020294           97 LGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST  169 (328)
Q Consensus        97 l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~  169 (328)
                      ++.|++. ++ +|+++....     .++||+|++|.++.       ....++|+.|++||....... +.  ..  ... 
T Consensus        91 l~~L~~~-g~-~P~~~~~~~-----~~~v~e~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~~-~~--~~--~~~-  157 (369)
T 3c5i_A           91 YKTMSKY-KI-APQLLNTFN-----GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRH-LP--EH--WDR-  157 (369)
T ss_dssp             HHHHHHT-TS-SCCEEEEET-----TEEEEECCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHSC-CC--TT--SCC-
T ss_pred             HHHHHhc-CC-CCceEEecC-----CcEEEEEecCCcCChhhcCChHHHHHHHHHHHHHHcCccccc-Cc--cc--CCC-
Confidence            9999987 56 999997652     38999999997642       246899999999999764210 10  00  000 


Q ss_pred             ccCCCCcccHHHHHHHhhhHHHHHHHHhhC----C--C-hHHHHHHHHHHHHhhhh--ccCCCCCCceeccCCCCCCeee
Q 020294          170 PQINKWTSNWIEFYAEHRLGYQLKLALDQY----G--D-STIYQRGHRLMKNLAPL--FEGVNVEPCLLHGDLWSGNISS  240 (328)
Q Consensus       170 ~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~----~--~-~~~~~~~~~~~~~l~~~--l~~~~~~~~LiHgDl~~~Nil~  240 (328)
                           +..    ++  .++..+.+......    .  + ..+.+.++++.+.+...  +.....+.++||||++++|||+
T Consensus       158 -----~p~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil~  226 (369)
T 3c5i_A          158 -----TPC----IF--KMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIIN  226 (369)
T ss_dssp             -----SCH----HH--HHHHHHHHHHTTCSSGGGC-CCHHHHHHHHHHHHHHHHHHTTSSCGGGCEEEECSCCCGGGEEE
T ss_pred             -----CCc----HH--HHHHHHHHHHhhhhhHHHHHhhHHHHHHHHHHHHHHHHHhhhhcccCCCeEEEeCCCCcccEEe
Confidence                 000    11  11222222211110    0  0 11223333334333321  1111357899999999999999


Q ss_pred             cCCCCeEEEccc-cccCCchhhhhhh
Q 020294          241 DKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       241 ~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      ++++ ++||||+ +++|+|.+||+.+
T Consensus       227 ~~~~-~~lID~e~a~~g~~~~Dla~~  251 (369)
T 3c5i_A          227 TNKC-LRLIDFEYSGFNFLATDIANF  251 (369)
T ss_dssp             CC-C-EEECCCTTCEEEEHHHHHHHH
T ss_pred             cCCc-EEEEEecCCCCCchHHHHHHH
Confidence            7665 7999995 7899999999975

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=99.85  E-value=1.9e-20  Score=179.52  Aligned_cols=212  Identities=16%  Similarity=0.128  Sum_probs=131.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           52 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ...++++++||.+|.+|+|++++  ++||||++.......  .+.|..+++.|++. ++ +|+++....     ...||+
T Consensus       109 ~~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~-gl-~P~ll~~~~-----~G~v~e  181 (458)
T 2qg7_A          109 DSLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNK-NI-AKKIYVFFT-----NGRIEE  181 (458)
T ss_dssp             TTEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTS-SS-BCCEEEEET-----TEEEEE
T ss_pred             cCeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhc-CC-CCCEEEEeC-----CeEEEE
Confidence            45789999999999999999987  699999986533222  26899999999986 44 799998763     146999


Q ss_pred             eecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcc--cc-cccCCCCcccHHHHHHHhhhHHHHHHHHh
Q 020294          128 FIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI--GS-TPQINKWTSNWIEFYAEHRLGYQLKLALD  197 (328)
Q Consensus       128 ~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~--g~-~~~~~~~~~~w~~~~~~~~l~~~~~~~~~  197 (328)
                      ||+|..+.       .....+|+.|++||......  +++......  +. .+..+    -|.      ++..+++....
T Consensus       182 ~I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~--~~~~~l~~~~~~~~~~~~~----~~~------~i~~w~~~~~~  249 (458)
T 2qg7_A          182 FMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNE--NLYKELQVTQKVPGTRPSF----LWN------TIWKYFHLLNE  249 (458)
T ss_dssp             CCCSEECCTTTTTSHHHHHHHHHHHHHHHTCCCCH--HHHHHHHHHHTCCSSSCCS----HHH------HHHHHHHHHHH
T ss_pred             eeCCccCChhhcCCHHHHHHHHHHHHHHhcCCccc--cchhcccccccccCCCCcc----HHH------HHHHHHHHHHH
Confidence            99997653       23688999999999987531  110000000  00 00011    121      11111111110


Q ss_pred             h---CC----ChH-----HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec------------------------
Q 020294          198 Q---YG----DST-----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD------------------------  241 (328)
Q Consensus       198 ~---~~----~~~-----~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~------------------------  241 (328)
                      .   ..    ...     ....+.+.++.+...+.....+.++|||||+++|||++                        
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (458)
T 2qg7_A          250 ERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEG  329 (458)
T ss_dssp             HHHSCCCTTSTTHHHHHBCHHHHHHHHHHHHHHHHTTTCCEEEECSCCCGGGEEECCC----------------------
T ss_pred             hccccccccchhhhcccCCHHHHHHHHHHHHHHhhhccCCeeEEecCCCCCcEEeecccccccccccccccccccccccc
Confidence            0   00    000     01233334444444443224578999999999999998                        


Q ss_pred             -------------CCCCeEEEcc-ccccCCchhhhhhhhh--cCC--------C----hhhHHHHhhhC
Q 020294          242 -------------KNGEPVILDP-ACYYGHNEAEFGMSWC--AGF--------G----GSFYNSYFEVM  282 (328)
Q Consensus       242 -------------~~~~~~iID~-~~~~G~p~~DLa~~~~--~~~--------~----~~f~~~Y~~~~  282 (328)
                                   +++.++|||| .+++|+|.+|||...+  .++        +    ..|+++|.+..
T Consensus       330 ~~~~~~~~~~~~~~~~~l~lIDfEya~~gdp~~DLA~~~~ew~~~~~d~~~~P~~~~~~~fl~~Y~~~~  398 (458)
T 2qg7_A          330 GETGEGGETGEGGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFNCDWDLTPSKEEEYHFIMHYLGTD  398 (458)
T ss_dssp             -------------CCCCEEECCCTTCEEEEHHHHHHHHHHGGGTTTTCGGGSCCHHHHHHHHHHHHTCC
T ss_pred             cccccccccccCCCCCeEEEEeecCCCCCCcHHHHHHHHHHhcccccccccCCCHHHHHHHHHHHhccC
Confidence                         3456899998 5789999999996522  222        2    36999998775

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=99.84  E-value=2.7e-20  Score=174.20  Aligned_cols=200  Identities=20%  Similarity=0.275  Sum_probs=127.6

Q ss_pred             hhHHHHHHHhc-CCC-----cceeeeeeeCCcccceeEEEEeCC---------ccEEEEecCCC--CcchHHHHHHHHHH
Q 020294           37 DDPIREWILSE-GKA-----THITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSI--GPSMFEGEALGLGA   99 (328)
Q Consensus        37 ~~~i~~~l~~~-~~~-----~~i~~v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~--~~~~~~~E~~~l~~   99 (328)
                      .+.+.+++.++ +.+     ....++++++||.+|.+|+++.++         ++||||++...  ....+.+|.++++.
T Consensus        30 ~~~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~  109 (379)
T 3feg_A           30 ERRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAI  109 (379)
T ss_dssp             HHHHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHH
Confidence            34455666564 222     245679999999999999999853         58999998642  23456789999999


Q ss_pred             HHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccC
Q 020294          100 MYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQI  172 (328)
Q Consensus       100 L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~  172 (328)
                      |++. ++ +|+++.....     ..||||++|..+.       .....+++.|++||....+   ++.+        +  
T Consensus       110 L~~~-gv-~P~ll~~~~~-----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~---~~~~--------~--  169 (379)
T 3feg_A          110 LAER-SL-GPQLYGVFPE-----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMP---FTKE--------P--  169 (379)
T ss_dssp             HHHT-TS-SCCEEEEETT-----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS---SCCS--------C--
T ss_pred             HHhc-CC-CCeEEEEcCC-----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC---CCCC--------c--
Confidence            9996 56 5999987642     3999999998663       2368899999999998753   2210        0  


Q ss_pred             CCCcccHHHHHHHhhhHHHHHHHHhhCCC--h--H-H-HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC---
Q 020294          173 NKWTSNWIEFYAEHRLGYQLKLALDQYGD--S--T-I-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN---  243 (328)
Q Consensus       173 ~~~~~~w~~~~~~~~l~~~~~~~~~~~~~--~--~-~-~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~---  243 (328)
                           .|.  +  .++..+++.......+  .  . + ...+.+.++.+.+++...+.+.++||||++++|||++++   
T Consensus       170 -----~~l--~--~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~  240 (379)
T 3feg_A          170 -----HWL--F--GTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPEN  240 (379)
T ss_dssp             -----CHH--H--HHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC--
T ss_pred             -----ccH--H--HHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCc
Confidence                 110  0  1233333333322110  0  0 0 001222333344344333467899999999999999876   


Q ss_pred             -CCeEEEccc-cccCCchhhhhhh
Q 020294          244 -GEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       244 -~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                       +..+||||+ +.+|+|.+||+..
T Consensus       241 ~~~~~~IDwE~a~~~~~~~Dla~~  264 (379)
T 3feg_A          241 ADSLMLVDFEYSSYNYRGFDIGNH  264 (379)
T ss_dssp             -CCEEECCCTTCEEEEHHHHHHHH
T ss_pred             cCcEEEEecccCCcCChHHHHHHH
Confidence             568999995 7899999999965

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=99.81  E-value=2.9e-19  Score=168.47  Aligned_cols=220  Identities=16%  Similarity=0.190  Sum_probs=134.1

Q ss_pred             hhhhcCChhHHHHHHHhcCC--CcceeeeeeeCCcccceeEEEEe--CCccEEEEecCCC----------CcchHHHHHH
Q 020294           30 FAMAALSDDPIREWILSEGK--ATHITKICPVGGGCINLASRYGT--DAGSFFVKTNRSI----------GPSMFEGEAL   95 (328)
Q Consensus        30 ~~~~~~~~~~i~~~l~~~~~--~~~i~~v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~----------~~~~~~~E~~   95 (328)
                      ++|+.++.+.|.+|+...+.  +....+++++++|..|.+|+++.  +++++|+|..++.          ..+.+..|.+
T Consensus         7 ~~~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~   86 (397)
T 2olc_A            7 PLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESS   86 (397)
T ss_dssp             CCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHH
T ss_pred             cccccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHH
Confidence            45678999999999996542  22346799999999999999965  3458999986531          1245678999


Q ss_pred             HHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCCCC
Q 020294           96 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDN  164 (328)
Q Consensus        96 ~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~~~  164 (328)
                      +|+.+++..+.+||+++..+.   +..++||||++|...           ...+..+|+.||++|....+   ++.+...
T Consensus        87 ~L~~l~~~~~~~vP~~~~~d~---~~~~lvmE~l~g~~~~~~~l~~~~~~~~~~~~l~~~La~lH~~~~~---~~~~~~~  160 (397)
T 2olc_A           87 ALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSD---YALEPKV  160 (397)
T ss_dssp             HHHHHHTTCGGGSCCEEEEET---TTTEEEECCCTTSEEHHHHHHTTCCCTTHHHHHHHHHHHHHHHTST---TTSCHHH
T ss_pred             HHHHhhhhCCCCcCeEEEEcC---CccEEEEEeCCCcchHHHHHhcCCcCHHHHHHHHHHHHHHhhhccc---ccCChHH
Confidence            999998765678999998763   457999999998421           13478999999999965432   2111000


Q ss_pred             c---cccc--cc-C-----CCCcccHHHHHH---HhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceec
Q 020294          165 T---IGST--PQ-I-----NKWTSNWIEFYA---EHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLH  230 (328)
Q Consensus       165 ~---~g~~--~~-~-----~~~~~~w~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiH  230 (328)
                      .   ....  +. .     ..+.+.|.....   ...+........   ....+...++++.+    .+.  ..+++|||
T Consensus       161 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~l~~~~~~l~~----~~~--~~~~~L~H  231 (397)
T 2olc_A          161 KKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLW---NNDSVKIEAAKLKK----SFL--TSAETLIH  231 (397)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHH---TCHHHHHHHHHHHH----HHH--HBCCEEEC
T ss_pred             HHHHHHhcCCHHHHHHHHHHhcccchhhhccccCCHhHHHHHHHhc---cCHHHHHHHHHHHH----Hhc--cCCCceee
Confidence            0   0000  00 0     000000000000   000111000000   11112222222222    222  13679999


Q ss_pred             cCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          231 GDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       231 gDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      ||||++||++++++ ++||||+ +++|+|.+||+++
T Consensus       232 GDl~~~Nil~~~~~-~~lID~e~a~~G~p~~DLa~~  266 (397)
T 2olc_A          232 GDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQF  266 (397)
T ss_dssp             SCCSGGGEEECSSC-EEECCCTTCEEECTHHHHHHH
T ss_pred             CCCCcCcEEEeCCC-eEEEeCcccccCChHHhHHHH
Confidence            99999999997765 8999995 7899999999975

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=99.68  E-value=3.1e-16  Score=148.18  Aligned_cols=192  Identities=15%  Similarity=0.125  Sum_probs=113.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC---------ccEEEEecCCCCcch---------------------HHHHHHHHHHHH
Q 020294           52 HITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIGPSM---------------------FEGEALGLGAMY  101 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~~~~---------------------~~~E~~~l~~L~  101 (328)
                      .-.+|++++||.+|.+|+|++++         .+++||+++......                     ...|..+...++
T Consensus        53 ~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~ls  132 (401)
T 3g15_A           53 DEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILA  132 (401)
T ss_dssp             GGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHhccCCCCCcchhHHHHHHH
Confidence            44689999999999999999754         269999986421100                     113555666676


Q ss_pred             hcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCC
Q 020294          102 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  174 (328)
Q Consensus       102 ~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~  174 (328)
                      .. + ..|+++....     ...+++|++|..+.       .....+++.|+++|.....   ++........       
T Consensus       133 ~~-g-~~p~l~~~f~-----~g~i~e~i~g~~l~~~~~~~~~~~~~ia~~La~lH~~~~~---~~~~~~~~~~-------  195 (401)
T 3g15_A          133 ER-S-LGPKLYGIFP-----QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMP---FNKEPKWLFG-------  195 (401)
T ss_dssp             HT-T-SSCCEEEEET-----TEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCS---SCCSCCHHHH-------
T ss_pred             hC-C-CCCEEEEEEC-----CcEEEEecCCCcCChhhhcCHHHHHHHHHHHHHHhccccc---cccccchHHH-------
Confidence            64 2 4788887653     37899999998653       2357899999999998753   2211000000       


Q ss_pred             CcccHHHHHHHh--hhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC------CCCe
Q 020294          175 WTSNWIEFYAEH--RLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK------NGEP  246 (328)
Q Consensus       175 ~~~~w~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~------~~~~  246 (328)
                      ....|...+...  ......+..... ....    +.+.++.+...+.....+.++||||++++|||+.+      ++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----l~~~~~~l~~~l~~~~~~~vfcHnDl~~gNil~~~~~~~~~~~~l  270 (401)
T 3g15_A          196 TMEKYLKEVLRIKFTEESRIKKLHKL-LSYN----LPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKL  270 (401)
T ss_dssp             HHHHHHHHHHHCCCCSHHHHHHHHHH-HTTC----HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSCCE
T ss_pred             HHHHHHHHHHhhccccHHHHHHHHHh-hhHH----HHHHHHHHHHhhhccCCCeeeEEecCCCCeEEEecCcccCcCCeE
Confidence            000111111100  000001000000 0011    12223334444443345779999999999999943      3457


Q ss_pred             EEEccc-cccCCchhhhhhh
Q 020294          247 VILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       247 ~iID~~-~~~G~p~~DLa~~  265 (328)
                      .+|||+ +++|+|.+|||..
T Consensus       271 ~vIDwEya~~n~~~fDlan~  290 (401)
T 3g15_A          271 MLIDFEYSSYNYRGFDIGNH  290 (401)
T ss_dssp             EECCCTTCEEEEHHHHHHHH
T ss_pred             EEechHhccCCCchHhHHHH
Confidence            999985 8899999999964

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.96  E-value=2.4e-09  Score=99.87  Aligned_cols=72  Identities=18%  Similarity=0.162  Sum_probs=54.6

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCC---------Cc----------------chHHHHHHHHHHHHhcCCCCccc
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSI---------GP----------------SMFEGEALGLGAMYETRTIRAPR  110 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~---------~~----------------~~~~~E~~~l~~L~~~~~v~VP~  110 (328)
                      ..||.|..+.||+....+| .+.||+.+..         ..                ....+|+..|..|... ++++|+
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~-gv~vp~  179 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE-GFPVPE  179 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT-TCSCCC
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc-CCCCCe
Confidence            4688999999999988766 7888986421         00                0124688889999876 799999


Q ss_pred             ceeccccCCCceEEEEeeecCCCC
Q 020294          111 PFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       111 ~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      |+...     ..++||||++|.++
T Consensus       180 p~~~~-----~~~LVME~i~G~~L  198 (397)
T 4gyi_A          180 PIAQS-----RHTIVMSLVDALPM  198 (397)
T ss_dssp             EEEEE-----TTEEEEECCSCEEG
T ss_pred             eeecc-----CceEEEEecCCccH
Confidence            99775     35999999998753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.79  E-value=3.3e-08  Score=91.12  Aligned_cols=137  Identities=18%  Similarity=0.184  Sum_probs=81.9

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.||.|....||++... +| .|.+|+-...     ....+.+|+++|+.|.+   -.+.+++..... ++..|+||
T Consensus        27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~-~~~~yiVm  102 (350)
T 4b9d_A           27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH---PNIVQYRESFEE-NGSLYIVM  102 (350)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC---CCCCcEEEEEEE-CCEEEEEE
Confidence            34678999999999999763 34 7888986432     13457789999998854   245566665544 57889999


Q ss_pred             eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294          127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  206 (328)
Q Consensus       127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  206 (328)
                      ||++|+.+          ...|+....    ..++               .        ..+.                .
T Consensus       103 Ey~~gg~L----------~~~i~~~~~----~~~~---------------e--------~~~~----------------~  129 (350)
T 4b9d_A          103 DYCEGGDL----------FKRINAQKG----VLFQ---------------E--------DQIL----------------D  129 (350)
T ss_dssp             ECCTTCBH----------HHHHHHTTT----CCCC---------------H--------HHHH----------------H
T ss_pred             eCCCCCcH----------HHHHHHcCC----CCCC---------------H--------HHHH----------------H
Confidence            99999853          122332211    0000               0        0011                1


Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      .+.+++..+..+-     ...+||+|++|+|||+++++.+.|+||.
T Consensus       130 ~~~qi~~aL~ylH-----~~~IiHRDlKp~NILl~~~g~vKl~DFG  170 (350)
T 4b9d_A          130 WFVQICLALKHVH-----DRKILHRDIKSQNIFLTKDGTVQLGDFG  170 (350)
T ss_dssp             HHHHHHHHHHHHH-----HTTCEETTCCGGGEEECTTCCEEECSTT
T ss_pred             HHHHHHHHHHHHH-----HCCeeeccCCHHHEEECCCCCEEEcccc
Confidence            1222333333221     2369999999999999998888999986

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.76  E-value=1e-07  Score=84.13  Aligned_cols=69  Identities=22%  Similarity=0.153  Sum_probs=52.9

Q ss_pred             eeeeCCcccceeEEEEe-CCc-c--EEEEecCCCC---c------------------------chHHHHHHHHHHHHhcC
Q 020294           56 ICPVGGGCINLASRYGT-DAG-S--FFVKTNRSIG---P------------------------SMFEGEALGLGAMYETR  104 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~~~-~--~vlK~~~~~~---~------------------------~~~~~E~~~l~~L~~~~  104 (328)
                      ...+|.|..+.||+... .+| .  +++|+.+...   .                        ..+..|++.++.|.+. 
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-  130 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA-  130 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC-
Confidence            35689999999999987 444 6  8999864310   0                        1467899999999875 


Q ss_pred             CCCcccceeccccCCCceEEEEeeec
Q 020294          105 TIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus       105 ~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++++|.++..+     ..++||||+.
T Consensus       131 ~i~~p~~~~~~-----~~~lVmE~~g  151 (258)
T 1zth_A          131 GVSVPQPYTYM-----KNVLLMEFIG  151 (258)
T ss_dssp             TCCCCCEEEEE-----TTEEEEECCE
T ss_pred             CCCCCeEEEcC-----CCEEEEEecC
Confidence            68999999764     4699999994

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.70  E-value=7.6e-08  Score=88.58  Aligned_cols=77  Identities=14%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecC---CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNR---SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~---~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.-++.||.|....||+.... +| .|.+|+-.   ......+.+|+++|+.|.+   -.+-+++..... ++..|+|||
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---pnIV~l~~~~~~-~~~~~ivmE  151 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVME  151 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEEC
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEe
Confidence            456788999999999999864 34 67888763   2335668899999998853   245566665443 568899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus       152 y~~gg~  157 (346)
T 4fih_A          152 FLEGGA  157 (346)
T ss_dssp             CCTTEE
T ss_pred             CCCCCc
Confidence            999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.69  E-value=1.2e-07  Score=89.58  Aligned_cols=152  Identities=14%  Similarity=0.189  Sum_probs=95.4

Q ss_pred             ChhHHHHHHHhc-CCC---cceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCC
Q 020294           36 SDDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTI  106 (328)
Q Consensus        36 ~~~~i~~~l~~~-~~~---~~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v  106 (328)
                      +.+++..-+... ..+   ..-.-++.||.|....||+.... +| .+.+|+-..   ...+.+.+|+.+|+.|.+   -
T Consensus       132 ~~~~~~~~l~~~~~~~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---p  208 (423)
T 4fie_A          132 SHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---E  208 (423)
T ss_dssp             HHHHHHHHHHHHSCSSCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCC---T
T ss_pred             ChhhhhhhccccCCCCChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCC---C
Confidence            345555555443 121   23456788999999999999864 34 678887642   235668899999998853   2


Q ss_pred             CcccceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHh
Q 020294          107 RAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH  186 (328)
Q Consensus       107 ~VP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~  186 (328)
                      .+-+++..... ++..|+||||++|+.+       .+.+.   . ..    +.                 .        .
T Consensus       209 nIV~l~~~~~~-~~~~~iVmEy~~gG~L-------~~~i~---~-~~----l~-----------------e--------~  247 (423)
T 4fie_A          209 NVVEMYNSYLV-GDELWVVMEFLEGGAL-------TDIVT---H-TR----MN-----------------E--------E  247 (423)
T ss_dssp             TBCCEEEEEEE-TTEEEEEEECCTTEEH-------HHHHH---H-SC----CC-----------------H--------H
T ss_pred             CCCceEEEEEE-CCEEEEEEeCCCCCcH-------HHHHh---c-cC----CC-----------------H--------H
Confidence            45566655443 4688999999999853       12221   1 10    10                 0        0


Q ss_pred             hhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          187 RLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      .+.                ..+.+++..+..+-     ...+||+|++|+|||++.++.+.|+||.
T Consensus       248 ~~~----------------~~~~qil~aL~ylH-----~~~IiHRDiKp~NILl~~~g~vKl~DFG  292 (423)
T 4fie_A          248 QIA----------------AVCLAVLQALSVLH-----AQGVIHRDIKSDSILLTHDGRVKLSDFG  292 (423)
T ss_dssp             HHH----------------HHHHHHHHHHHHHH-----HTTEECCCCSTTTEEECTTCCEEECCCT
T ss_pred             HHH----------------HHHHHHHHHHHHHH-----HCCeecccCCHHHEEEcCCCCEEEecCc
Confidence            011                11222333333221     2369999999999999999888999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.67  E-value=5.1e-08  Score=88.42  Aligned_cols=133  Identities=14%  Similarity=0.052  Sum_probs=85.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... ++ .|.+|+-..      .....+.+|+++|+.|.+   -.+.+++....+ ++..|+|||
T Consensus        37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~yivmE  112 (311)
T 4aw0_A           37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH---PFFVKLYFTFQD-DEKLYFGLS  112 (311)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEEe
Confidence            567899999999999863 34 788998642      234567889998887743   245566655443 568899999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |++|+.+       .+.+.   ....    +.                 ..        ...                ..
T Consensus       113 y~~gG~L-------~~~i~---~~~~----l~-----------------e~--------~~~----------------~~  137 (311)
T 4aw0_A          113 YAKNGEL-------LKYIR---KIGS----FD-----------------ET--------CTR----------------FY  137 (311)
T ss_dssp             CCTTEEH-------HHHHH---HHSS----CC-----------------HH--------HHH----------------HH
T ss_pred             cCCCCCH-------HHHHH---HcCC----CC-----------------HH--------HHH----------------HH
Confidence            9999853       22222   1111    10                 00        011                11


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      +.+++..+..+-     ...+||+|++|+|||++.++.+.|+||.
T Consensus       138 ~~qi~~al~ylH-----~~~IiHRDlKPeNILl~~~g~vKl~DFG  177 (311)
T 4aw0_A          138 TAEIVSALEYLH-----GKGIIHRDLKPENILLNEDMHIQITDFG  177 (311)
T ss_dssp             HHHHHHHHHHHH-----HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             HHHHHHHHHHHH-----HCCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence            222333333221     2379999999999999998888999985

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.64  E-value=1.7e-07  Score=83.79  Aligned_cols=70  Identities=16%  Similarity=0.130  Sum_probs=53.7

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------cchHHHHHHHHHHHHhcCCCCcccceec
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------PSMFEGEALGLGAMYETRTIRAPRPFKV  114 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------~~~~~~E~~~l~~L~~~~~v~VP~~~~~  114 (328)
                      +.+|.|..+.||++...+| .+++|+.+...                     ...+..|+++++.|. +  +++|.++..
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~--~~v~~~~~~  172 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G--LAVPKVYAW  172 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T--SSSCCEEEE
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C--CCcCeEEec
Confidence            6788999999999988545 89999985311                     123678999999998 3  788887654


Q ss_pred             cccCCCceEEEEeeecCCCC
Q 020294          115 GALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       115 ~~~~~~~~~~v~e~l~G~~~  134 (328)
                      +     ..++||||++|+++
T Consensus       173 ~-----~~~lvmE~~~g~~L  187 (282)
T 1zar_A          173 E-----GNAVLMELIDAKEL  187 (282)
T ss_dssp             E-----TTEEEEECCCCEEG
T ss_pred             c-----ceEEEEEecCCCcH
Confidence            3     56999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.61  E-value=2.4e-07  Score=82.62  Aligned_cols=72  Identities=13%  Similarity=0.064  Sum_probs=49.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... ++ .|.+|+-..      .....+.+|+++++.|.+   -.+.+++....+ ++..|+|||
T Consensus        18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE   93 (275)
T 3hyh_A           18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH---PHIIKLYDVIKS-KDEIIMVIE   93 (275)
T ss_dssp             EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEEe
Confidence            567899999999999753 34 788897642      123457889999998853   246666665543 568899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |++|
T Consensus        94 y~~g   97 (275)
T 3hyh_A           94 YAGN   97 (275)
T ss_dssp             CCCE
T ss_pred             CCCC
Confidence            9955

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.55  E-value=8.3e-08  Score=94.35  Aligned_cols=99  Identities=19%  Similarity=0.215  Sum_probs=66.8

Q ss_pred             chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCccc
Q 020294           88 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG  167 (328)
Q Consensus        88 ~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g  167 (328)
                      ..+..|+++|+.+.+  ...+|+++.++.+ ++..|+||||++|+++       .+.|.+    ...   +         
T Consensus       286 ~~~~~E~~~l~~~~~--~~~i~~~~~~~ed-~~~~yLVMEyv~G~~L-------~d~i~~----~~~---l---------  339 (569)
T 4azs_A          286 YELHNEIKFLTQPPA--GFDAPAVLAHGEN-AQSGWLVMEKLPGRLL-------SDMLAA----GEE---I---------  339 (569)
T ss_dssp             HHHHHHHHHHHSCCT--TCCCCCEEEEEEC-SSEEEEEEECCCSEEH-------HHHHHT----TCC---C---------
T ss_pred             HHHHHHHHHHHhcCC--CCCeeEEEEEEEE-CCEEEEEEecCCCCcH-------HHHHHh----CCC---C---------
Confidence            347788988888865  3689999999876 6789999999999853       222211    100   0         


Q ss_pred             ccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeE
Q 020294          168 STPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV  247 (328)
Q Consensus       168 ~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~  247 (328)
                               +       ..++                   +.++++.+..+-     ...+||+|++|+|||+++++.+.
T Consensus       340 ---------~-------~~~I-------------------~~QIl~AL~ylH-----~~GIIHRDIKPeNILL~~dg~vK  379 (569)
T 4azs_A          340 ---------D-------REKI-------------------LGSLLRSLAALE-----KQGFWHDDVRPWNVMVDARQHAR  379 (569)
T ss_dssp             ---------C-------HHHH-------------------HHHHHHHHHHHH-----HTTCEESCCCGGGEEECTTSCEE
T ss_pred             ---------C-------HHHH-------------------HHHHHHHHHHHH-----HCCceeccCchHhEEECCCCCEE
Confidence                     0       0111                   112233333221     34799999999999999999899


Q ss_pred             EEccc
Q 020294          248 ILDPA  252 (328)
Q Consensus       248 iID~~  252 (328)
                      |+||.
T Consensus       380 L~DFG  384 (569)
T 4azs_A          380 LIDFG  384 (569)
T ss_dssp             ECCCT
T ss_pred             Eeecc
Confidence            99986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.54  E-value=5.1e-07  Score=81.59  Aligned_cols=76  Identities=14%  Similarity=0.012  Sum_probs=47.1

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHH--HHHhcCCCCcccceeccccCC---CceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLG--AMYETRTIRAPRPFKVGALPT---GGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~--~L~~~~~v~VP~~~~~~~~~~---~~~~~v~e~l~  130 (328)
                      -+.||.|....||+....+..+.+|.-.......+..|.++..  .|.+   -.+-+++.+....+   ...++||||++
T Consensus         8 ~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~H---pNIv~l~g~~~~~~~~~~~~~lV~Ey~~   84 (303)
T 3hmm_A            8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH---ENILGFIAADNKDNGTWTQLWLVSDYHE   84 (303)
T ss_dssp             EEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC---TTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCC---CCCCcEEEEEEecCCCceEEEEEecCCC
Confidence            4678999999999998766688899876433233334444332  2221   23444555443211   24689999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus        85 ~gsL   88 (303)
T 3hmm_A           85 HGSL   88 (303)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            9864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.53  E-value=5.9e-07  Score=82.90  Aligned_cols=78  Identities=13%  Similarity=0.163  Sum_probs=54.5

Q ss_pred             eeeeCCcccceeEEEE------eCC-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYG------TDA-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~------~~~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.+|.|....||++.      ... ..+++|.........+..|.+.++.|.....-.+.+++..... .+..++||||
T Consensus        70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~~~lv~e~  148 (365)
T 3e7e_A           70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNGSVLVGEL  148 (365)
T ss_dssp             EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSCEEEEECC
T ss_pred             EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCCcEEEEec
Confidence            4568889999999993      333 3789999876656667888888888864322234445544333 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus       149 ~~~g~L  154 (365)
T 3e7e_A          149 YSYGTL  154 (365)
T ss_dssp             CCSCBH
T ss_pred             cCCCcH
Confidence            999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.52  E-value=2.1e-07  Score=85.30  Aligned_cols=75  Identities=23%  Similarity=0.142  Sum_probs=52.1

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .-.+.||.|....||+.... +| .+.+|+-+..  ....+|+.+++.|.+   -.+.+++.+... ++..|+||||++|
T Consensus        61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~--~~~~~E~~il~~l~H---pnIV~l~~~~~~-~~~~~ivmEy~~g  134 (336)
T 4g3f_A           61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE--VFRVEELVACAGLSS---PRIVPLYGAVRE-GPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT--TCCTHHHHTTTTCCC---TTBCCEEEEEEE-TTEEEEEECCCTT
T ss_pred             EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH--HhHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEeccCC
Confidence            44567999999999999864 34 7888987542  223468887776643   235556655443 4678999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus       135 g~L  137 (336)
T 4g3f_A          135 GSL  137 (336)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            853

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.51  E-value=6.1e-07  Score=81.22  Aligned_cols=77  Identities=14%  Similarity=0.084  Sum_probs=53.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+.=.+.||.|....||+.... +.+.+|+-...  .   ...+.+|+++++.|.+   -.+-+++.+..  ++..++||
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~-~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H---pNIV~l~g~~~--~~~~~iVm  110 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWH-GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH---VNILLFMGYMT--KDNLAIVT  110 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESS-SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEEC-CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEE--CCeEEEEE
Confidence            3444677999999999999754 45778876421  1   2457789988887754   23445665543  45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       111 Ey~~gGsL  118 (307)
T 3omv_A          111 QWCEGSSL  118 (307)
T ss_dssp             ECCSSCBH
T ss_pred             EcCCCCCH
Confidence            99999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=98.51  E-value=9.4e-08  Score=86.46  Aligned_cols=135  Identities=17%  Similarity=0.081  Sum_probs=78.4

Q ss_pred             eeeeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           54 TKICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .-++.+|.|....||++...    .+ .|.+|+-...     ....+..|+++|+.|.+   -.+.+++....+ ++..|
T Consensus        27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~  102 (304)
T 3ubd_A           27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH---PFIVKLHYAFQT-EGKLY  102 (304)
T ss_dssp             EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC---TTEECEEEEEEE-TTEEE
T ss_pred             EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEE
Confidence            34667899999999998642    22 5788876431     23346678877766532   235555555443 57889


Q ss_pred             EEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH
Q 020294          124 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST  203 (328)
Q Consensus       124 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~  203 (328)
                      +||||++|+++.          ..++....    +.                 .        ..+.              
T Consensus       103 ivmEy~~gg~L~----------~~l~~~~~----l~-----------------e--------~~~~--------------  129 (304)
T 3ubd_A          103 LILDFLRGGDLF----------TRLSKEVM----FT-----------------E--------EDVK--------------  129 (304)
T ss_dssp             EEECCCTTCEEH----------HHHHHHCC----CC-----------------H--------HHHH--------------
T ss_pred             EEEEcCCCCCHH----------HHHHhcCC----CC-----------------H--------HHHH--------------
Confidence            999999998651          12222111    10                 0        0011              


Q ss_pred             HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                        ..+.+++..+..+-     ...++|+|++|+|||+++++.+.|+||.
T Consensus       130 --~~~~qi~~aL~ylH-----~~~IiHRDlKp~NILl~~~g~vKl~DFG  171 (304)
T 3ubd_A          130 --FYLAELALALDHLH-----SLGIIYRDLKPENILLDEEGHIKLTDFG  171 (304)
T ss_dssp             --HHHHHHHHHHHHHH-----HTTCCCSSCCGGGEEECTTSCEEEESSE
T ss_pred             --HHHHHHHHHHHHHH-----HCCCcCCCCCHHHeEEcCCCCEEecccc
Confidence              11222333333221     2369999999999999999888999985

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.50  E-value=6.9e-07  Score=82.79  Aligned_cols=94  Identities=12%  Similarity=-0.033  Sum_probs=60.0

Q ss_pred             hhHHHHHHHhcC-CCcceeeeeeeCCcccceeEEEEeC----Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcc
Q 020294           37 DDPIREWILSEG-KATHITKICPVGGGCINLASRYGTD----AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAP  109 (328)
Q Consensus        37 ~~~i~~~l~~~~-~~~~i~~v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP  109 (328)
                      +++++++..... ....-.=.+.+|.|..+.||+.+..    .+ .+.+|.-.. .....+.+|.++|+.+.++  -.+.
T Consensus         6 ~~~i~~l~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h--~nIv   83 (361)
T 4f9c_A            6 KKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQ--DNVM   83 (361)
T ss_dssp             CHHHHHHHHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSB--TTBC
T ss_pred             HHHHHHHHHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCC--CCCc
Confidence            455666665441 1111122567899999999998642    23 678886543 3345577899988888554  2345


Q ss_pred             cceeccccCCCceEEEEeeecCCC
Q 020294          110 RPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       110 ~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      +++..... .+..++||||++|+.
T Consensus        84 ~l~~~~~~-~~~~~lvmE~~~g~~  106 (361)
T 4f9c_A           84 GVKYCFRK-NDHVVIAMPYLEHES  106 (361)
T ss_dssp             CCSEEEEE-TTEEEEEEECCCCCC
T ss_pred             eEEEEEEE-CCEEEEEEeCCCccc
Confidence            55544332 467899999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.47  E-value=1.4e-06  Score=76.53  Aligned_cols=78  Identities=19%  Similarity=0.162  Sum_probs=58.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.+|.|..+.||+....++ .+++|+....  ....+..|++.++.+.+   -.+++++..... .+..+++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   84 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH---PKLVKFYGVCSK-EYPIYIVTEY   84 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSEEEEEEC
T ss_pred             heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCceEEEEEc
Confidence            455577889999999999987766 7899987643  34557789998888853   346667766543 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        85 ~~~~~   89 (268)
T 3sxs_A           85 ISNGC   89 (268)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.44  E-value=1.2e-06  Score=80.09  Aligned_cols=78  Identities=18%  Similarity=0.138  Sum_probs=55.2

Q ss_pred             eeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           53 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      +.=.+.||.|....||+....      ++ .+.+|.-....   ...+.+|+++|+.|.+   -.+-+++.+... .+..
T Consensus        43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---pnIV~l~g~~~~-~~~~  118 (329)
T 4aoj_A           43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH---QHIVRFFGVCTE-GRPL  118 (329)
T ss_dssp             EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSE
T ss_pred             eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEE
Confidence            444567999999999998753      23 57788875432   3457789988887743   246666666543 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      ++||||++|+.+
T Consensus       119 ~lV~Ey~~~G~L  130 (329)
T 4aoj_A          119 LMVFEYMRHGDL  130 (329)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEEcCCCCcH
Confidence            999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.44  E-value=1.4e-06  Score=80.56  Aligned_cols=76  Identities=13%  Similarity=0.109  Sum_probs=53.8

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .+.+|.|..+.||+.... +| .++||+.+...           ...+..|..+++.+.++.  .+++++.+... .+..
T Consensus        99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp--~iv~~~~~~~~-~~~~  175 (365)
T 2y7j_A           99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP--HIITLIDSYES-SSFM  175 (365)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCT--TBCCEEEEEEB-SSEE
T ss_pred             ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCC--CEeEEEEEEee-CCEE
Confidence            367888999999999874 34 78999875321           234667888888886542  35555554433 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      ++||||++|+.+
T Consensus       176 ~lv~e~~~g~~L  187 (365)
T 2y7j_A          176 FLVFDLMRKGEL  187 (365)
T ss_dssp             EEEECCCTTCBH
T ss_pred             EEEEEeCCCCcH
Confidence            999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.43  E-value=3.3e-07  Score=82.73  Aligned_cols=79  Identities=16%  Similarity=0.111  Sum_probs=53.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      .++=.+.+|.|....||+....      ++ .+.+|.-....   ...+.+|+++++.|.+   -.+-+++.+... .+.
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---pnIV~l~g~~~~-~~~   89 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH---EHIVKFYGVCVE-GDP   89 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSS
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCC---CCCccEEEEEee-CCE
Confidence            3444567999999999998742      23 56778765432   3457789988887743   246666666543 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+++
T Consensus        90 ~~lV~Ey~~~G~L  102 (299)
T 4asz_A           90 LIMVFEYMKHGDL  102 (299)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            8999999999864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.43  E-value=1.4e-06  Score=77.16  Aligned_cols=78  Identities=15%  Similarity=0.135  Sum_probs=55.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.+|.|..+.||+....++ .+++|+....  ....+..|+++++.+.+   -.+++++..... .+..+++|||
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~  100 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH---EKLVQLYGVCTK-QRPIFIITEY  100 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSEEEEECC
T ss_pred             HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCC---CCEeeEEEEEec-CCCeEEEEec
Confidence            455578899999999999987765 7899988643  34557788888887753   346667766543 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus       101 ~~~~~  105 (283)
T 3gen_A          101 MANGC  105 (283)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.41  E-value=3.2e-06  Score=76.45  Aligned_cols=80  Identities=10%  Similarity=0.006  Sum_probs=59.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~  128 (328)
                      .-.-++.+|.|..+.||++... + ..+++|+........+..|+.+++.|.++  -.+++++.....+ ....+++||+
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG--PNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTS--TTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCC--CCEEEeeeeeccCCCCceEEEEec
Confidence            3445778899999999999753 3 38899998765567788999999999753  3466666654432 3578999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus       115 ~~~~~  119 (330)
T 3nsz_A          115 VNNTD  119 (330)
T ss_dssp             CCCCC
T ss_pred             cCchh
Confidence            99875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.41  E-value=7.2e-07  Score=80.11  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=50.4

Q ss_pred             eeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEEEE
Q 020294           57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~v~  126 (328)
                      +.||.|....||+.... ++ .+.+|.-...     ....+.+|+++++.|.+   -.+.+++.+....   .+..|+||
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEeeccCCCcEEEEEE
Confidence            35899999999998754 34 6777765321     13457789998888853   2455666543221   23569999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       109 Ey~~gg~L  116 (290)
T 3fpq_A          109 ELMTSGTL  116 (290)
T ss_dssp             ECCCSCBH
T ss_pred             eCCCCCCH
Confidence            99999853

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.39  E-value=1.1e-06  Score=77.29  Aligned_cols=78  Identities=19%  Similarity=0.144  Sum_probs=58.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.+|.|..+.||+....++ .+++|.....  ....+..|+++++.+.+   -.+++++..... .+..+++|||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   86 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVFEF   86 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSEEEEEEC
T ss_pred             hceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCceEEEEEe
Confidence            445577899999999999987544 7899987643  34567789988888853   346667766543 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        87 ~~~~~   91 (269)
T 4hcu_A           87 MEHGC   91 (269)
T ss_dssp             CTTCB
T ss_pred             CCCCc
Confidence            99975

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.38  E-value=2.4e-06  Score=76.49  Aligned_cols=78  Identities=13%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.-++.+|.|..+.||++... ++ .+++|....   .....+..|+.+++.+.+   -.+++++..... .+..++|||
T Consensus        22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e   97 (297)
T 3fxz_A           22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVME   97 (297)
T ss_dssp             BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEEE
T ss_pred             eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCC---CCCCeEeEEEEE-CCEEEEEEE
Confidence            344677899999999999753 33 788887642   234557788888877743   346666665443 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        98 ~~~~~~L  104 (297)
T 3fxz_A           98 YLAGGSL  104 (297)
T ss_dssp             CCTTCBH
T ss_pred             CCCCCCH
Confidence            9999753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.38  E-value=2.6e-06  Score=75.76  Aligned_cols=78  Identities=10%  Similarity=0.062  Sum_probs=57.7

Q ss_pred             ceeeeeeeCCcccceeEEEEe-CC-ccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGT-DA-GSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-~~-~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-.-.+.++.|..+.||++.. .+ ..+++|+... .....+..|...++.+.++  -.+|.++..... ....+++||+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~   87 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQE-GLHNVLVIDL   87 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEE-TTEEEEEEEC
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcC--CCCCeEEeecCC-CceeEEEEEe
Confidence            344567788999999999985 33 4889998753 3345688999999998664  357888877654 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      + |++
T Consensus        88 ~-~~~   91 (298)
T 1csn_A           88 L-GPS   91 (298)
T ss_dssp             C-CCB
T ss_pred             c-CCC
Confidence            9 654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.37  E-value=1.4e-06  Score=78.62  Aligned_cols=76  Identities=16%  Similarity=0.070  Sum_probs=48.4

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----------
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----------  118 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----------  118 (328)
                      ++.+|.|....||++... ++ .|.+|.-...    ....+.+|+.+|+.|.+   -.+.+++......           
T Consensus        10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~~~~~~~~~~~~~   86 (299)
T 4g31_A           10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH---PGIVRYFNAWLEKNTTEKLQPSSP   86 (299)
T ss_dssp             EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEEC----------
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEecCccccccccCC
Confidence            567899999999999753 34 7888875421    12456788888887743   2355555432211           


Q ss_pred             CCceEEEEeeecCCCC
Q 020294          119 TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 ~~~~~~v~e~l~G~~~  134 (328)
                      ....|++|||++|+.+
T Consensus        87 ~~~l~ivmE~~~gg~L  102 (299)
T 4g31_A           87 KVYLYIQMQLCRKENL  102 (299)
T ss_dssp             CEEEEEEEECCCSCCH
T ss_pred             CcEEEEEEecCCCCcH
Confidence            1235899999999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.37  E-value=4.4e-06  Score=75.30  Aligned_cols=79  Identities=14%  Similarity=0.058  Sum_probs=57.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ...-.+.+|.|..+.||+....+..+++|+.....     ...+..|+++++.+.+   -.+++++..... .+..++||
T Consensus        38 ~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~  113 (309)
T 3p86_A           38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH---PNIVLFMGAVTQ-PPNLSIVT  113 (309)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-TTCCEEEE
T ss_pred             HceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCceEEEE
Confidence            34456778999999999998776689999876422     2346678888888853   346666665543 45789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       114 e~~~~~~L  121 (309)
T 3p86_A          114 EYLSRGSL  121 (309)
T ss_dssp             ECCTTCBH
T ss_pred             ecCCCCcH
Confidence            99999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.36  E-value=1.6e-06  Score=78.48  Aligned_cols=75  Identities=15%  Similarity=0.090  Sum_probs=52.6

Q ss_pred             eeeeeCCcccceeEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      -.+.+|.|..+.||+....++ .+++|.....    ....+..|+++++.+.+   -.+++++..... .+..+++|||+
T Consensus        34 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~  109 (326)
T 3uim_A           34 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH---RNLLRLRGFCMT-PTERLLVYPYM  109 (326)
T ss_dssp             STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCC---TTBCCCCEEECC-SSCCEEEEECC
T ss_pred             cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccC---CCccceEEEEec-CCceEEEEEec
Confidence            356688899999999986555 7889987532    23357788877766643   346666665443 45779999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus       110 ~~~~  113 (326)
T 3uim_A          110 ANGS  113 (326)
T ss_dssp             TTCB
T ss_pred             cCCC
Confidence            9975

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.35  E-value=4.7e-06  Score=75.42  Aligned_cols=79  Identities=11%  Similarity=0.037  Sum_probs=55.1

Q ss_pred             ceeeeeeeCCcccceeEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+.=++.||.|....||+-..      .++ .+.+|.-...    ....+.+|+.++..|.+   -.+-+++.+... ++
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~H---pNIV~l~g~~~~-~~  102 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH---PNVVCLLGVVTK-DQ  102 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCC---CCCCCcceEEEE-CC
Confidence            444467899999999999764      123 5678876432    23568889999988854   245566666543 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++|+++
T Consensus       103 ~~~lV~Ey~~~G~L  116 (308)
T 4gt4_A          103 PLSMIFSYCSHGDL  116 (308)
T ss_dssp             SCEEEEECCSSCBH
T ss_pred             EEEEEEEcCCCCcH
Confidence            78999999999863

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.35  E-value=3.5e-06  Score=75.42  Aligned_cols=96  Identities=9%  Similarity=0.004  Sum_probs=64.7

Q ss_pred             CChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCC
Q 020294           35 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        35 ~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~  107 (328)
                      .+.+++............-..-+.+|.|..+.||+....+..+++|.....       ....+..|+.+++.+.+   -.
T Consensus        15 ~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~   91 (307)
T 2nru_A           15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH---EN   91 (307)
T ss_dssp             CCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC---TT
T ss_pred             ccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC---CC
Confidence            356666666654422211122367889999999999877678999987531       13457788888888853   34


Q ss_pred             cccceeccccCCCceEEEEeeecCCCC
Q 020294          108 APRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       108 VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      +++++..... .+..+++|||++|+.+
T Consensus        92 i~~~~~~~~~-~~~~~lv~e~~~~~~L  117 (307)
T 2nru_A           92 LVELLGFSSD-GDDLCLVYVYMPNGSL  117 (307)
T ss_dssp             BCCEEEEECS-SSSCEEEEECCTTCBH
T ss_pred             eEEEEEEEec-CCceEEEEEecCCCcH
Confidence            6677766543 4678999999998753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.35  E-value=2.3e-06  Score=78.84  Aligned_cols=79  Identities=16%  Similarity=0.085  Sum_probs=55.5

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.-++.+|.|....||++.... + .|.+|+...      .....+..|..+++.+.++  -.+++++..... .+..++
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~h--p~Iv~l~~~~~~-~~~~~l  101 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLFCCFQT-PDRLFF  101 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCC--CceeeEEEEEEe-CCEEEE
Confidence            3446678999999999998643 3 788998652      1234466788888877543  346666665543 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       102 v~E~~~gg~L  111 (353)
T 3txo_A          102 VMEFVNGGDL  111 (353)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.33  E-value=2.8e-06  Score=84.37  Aligned_cols=137  Identities=16%  Similarity=0.127  Sum_probs=83.8

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -++.||.|..+.||++... +| .|.+|+-..      ........|..+++.+.....-.+.+++..-.+ .+..|+||
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~lylVm  271 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFIL  271 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEEEEEE
Confidence            3567899999999999864 34 788897642      223445566666776654221234455554433 46889999


Q ss_pred             eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294          127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  206 (328)
Q Consensus       127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  206 (328)
                      ||++|+.+       -..|   .....    +.                 .....+                        
T Consensus       272 Ey~~GGdL-------~~~l---~~~~~----l~-----------------E~~a~~------------------------  296 (689)
T 3v5w_A          272 DLMNGGDL-------HYHL---SQHGV----FS-----------------EADMRF------------------------  296 (689)
T ss_dssp             CCCCSCBH-------HHHH---HHHCC----CC-----------------HHHHHH------------------------
T ss_pred             ecCCCCcH-------HHHH---HhcCC----CC-----------------HHHHHH------------------------
Confidence            99999854       2222   22111    10                 010111                        


Q ss_pred             HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      .+.+++..+..+-     ...+||+||+|+|||++.+|.+.|+||+
T Consensus       297 y~~qIl~aL~yLH-----~~gIiHRDLKPeNILld~~G~vKL~DFG  337 (689)
T 3v5w_A          297 YAAEIILGLEHMH-----NRFVVYRDLKPANILLDEHGHVRISDLG  337 (689)
T ss_dssp             HHHHHHHHHHHHH-----TTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             HHHHHHHHHHHHH-----HCCccccCCchHHeEEeCCCCEEecccc
Confidence            1222333333221     3479999999999999999989999985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.31  E-value=4.1e-06  Score=76.03  Aligned_cols=78  Identities=10%  Similarity=-0.031  Sum_probs=56.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-.+.+|.|....||++... ++ .+++|+... .....+..|+++++.|.++  -.+++++..... .+..++|||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~~~lv~e~   86 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG--DGIPQVYYFGPC-GKYNAMVLEL   86 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSC--TTSCCEEEEEEE-TTEEEEEEEC
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCC--CCCCEEEEEEec-CCccEEEEEe
Confidence            3445677899999999999853 33 789998753 2345688999999999654  357777776654 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      + |+.
T Consensus        87 ~-~~~   90 (330)
T 2izr_A           87 L-GPS   90 (330)
T ss_dssp             C-CCB
T ss_pred             C-CCC
Confidence            9 653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.31  E-value=1.9e-06  Score=76.13  Aligned_cols=79  Identities=19%  Similarity=0.188  Sum_probs=55.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...-++.++.|..+.||+.+..+..+++|+.... ....+..|.+.++.+.+   -.+.+++.......+..+++|||++
T Consensus        22 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           22 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC---TTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCC---CCEeeEEEEEEcCCCceEEEEecCC
Confidence            4455677898999999999887668999998653 34557788888877743   2455566543322357899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |++
T Consensus        99 ~~~  101 (278)
T 1byg_A           99 KGS  101 (278)
T ss_dssp             TEE
T ss_pred             CCC
Confidence            874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.29  E-value=4.3e-06  Score=74.61  Aligned_cols=76  Identities=17%  Similarity=0.059  Sum_probs=53.8

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCCCCc------chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGP------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~------~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.+|.|....||+.....  ..+++|+......      ..+..|...+..+.+   -.+++++..... .+..|+|
T Consensus        34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv  109 (286)
T 3uqc_A           34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK---PGVARVLDVVHT-RAGGLVV  109 (286)
T ss_dssp             EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC---CCcceeeEEEEE-CCcEEEE
Confidence            335778999999999998753  3788999864321      345667776655532   346777776554 4688999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|+.
T Consensus       110 ~e~~~g~~  117 (286)
T 3uqc_A          110 AEWIRGGS  117 (286)
T ss_dssp             EECCCEEE
T ss_pred             EEecCCCC
Confidence            99999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.29  E-value=5e-06  Score=77.94  Aligned_cols=79  Identities=6%  Similarity=0.016  Sum_probs=55.5

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-++.+|.|....||++.... + .|.+|+...      .....+..|..++..+.++  -.+++++..... .+..++
T Consensus        54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~h--p~Iv~l~~~~~~-~~~~~l  130 (396)
T 4dc2_A           54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFF  130 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCC--CCcCeeEEEEEE-CCEEEE
Confidence            3446778999999999998753 3 688887642      1235577889888877554  245566665443 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       131 V~E~~~gg~L  140 (396)
T 4dc2_A          131 VIEYVNGGDL  140 (396)
T ss_dssp             EEECCTTCBH
T ss_pred             EEEcCCCCcH
Confidence            9999999753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.29  E-value=4.3e-06  Score=75.94  Aligned_cols=80  Identities=14%  Similarity=-0.005  Sum_probs=55.7

Q ss_pred             eeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCC---CceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~~~~v~e~l~  130 (328)
                      .-.+.++.|....||+....+..+++|+........+..|.++++.+.-. .-.+.+++.......   ...+++|||++
T Consensus        45 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  123 (342)
T 1b6c_B           45 VLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLVSDYHE  123 (342)
T ss_dssp             EEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred             EEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcC-CCcEEEEEeeecccCCccceeEEEEeecC
Confidence            44567888999999999887668999998654445566788877764211 234566666544322   26799999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       124 ~g~L  127 (342)
T 1b6c_B          124 HGSL  127 (342)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            9753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.29  E-value=2.2e-06  Score=77.85  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=55.3

Q ss_pred             eeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294           57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      +.+|.|..+.||++... ++ .+++|+...........|...++.+.++  -.+++++..... .+..++||||++|+.
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h--~niv~~~~~~~~-~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGH--PNIVKLHEVFHD-QLHTFLVMELLNGGE   92 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCC--CCeeEEEEEEEc-CCEEEEEEEccCCCc
Confidence            56888999999998874 33 7899987654445677899888888743  356667766543 467899999999975

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.28  E-value=1.1e-05  Score=72.69  Aligned_cols=77  Identities=19%  Similarity=0.125  Sum_probs=54.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.-++.+|.|..+.||+....++ .+++|......     ...+.+|+++++.+.+   -.+++++..... .+..++|
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv   97 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH---PNIVSLIDVIHS-ERCLTLV   97 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCC---TTBCCEEEEECC-SSCEEEE
T ss_pred             hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC---CCEeeeeeEEcc-CCEEEEE
Confidence            455578899999999999987655 78889875321     2446688888888843   346666665443 4678999


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      |||++|.
T Consensus        98 ~e~~~~~  104 (311)
T 3niz_A           98 FEFMEKD  104 (311)
T ss_dssp             EECCSEE
T ss_pred             EcCCCCC
Confidence            9999873

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.28  E-value=9.4e-06  Score=75.13  Aligned_cols=79  Identities=18%  Similarity=0.165  Sum_probs=55.7

Q ss_pred             eeeeeeeCCcccceeEEEEeC--------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           53 ITKICPVGGGCINLASRYGTD--------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~--------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      ..-.+.+|.|....||+....        ++ .+++|+.....    ...+..|.++++.+.++  -.+++++..... .
T Consensus        83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-~  159 (370)
T 2psq_A           83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-D  159 (370)
T ss_dssp             EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCC--TTBCCEEEEECS-S
T ss_pred             CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEcc-C
Confidence            344567899999999998742        12 58889876432    23467889888888543  346677766543 4


Q ss_pred             CceEEEEeeecCCCC
Q 020294          120 GGSYIIMEFIEFGSS  134 (328)
Q Consensus       120 ~~~~~v~e~l~G~~~  134 (328)
                      +..++||||++|+.+
T Consensus       160 ~~~~lv~e~~~~g~L  174 (370)
T 2psq_A          160 GPLYVIVEYASKGNL  174 (370)
T ss_dssp             SSCEEEEECCTTCBH
T ss_pred             CCEEEEEEcCCCCCH
Confidence            678999999999853

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.27  E-value=6.6e-06  Score=78.29  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=59.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...-.+.+|.|....||+....+..+++|..... ....+..|+.+++.|.+   -.+.+++.......+..++||||++
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~iv~e~~~  270 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMA  270 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCC---TTBCCEEEEEECTTSCEEEEEECCT
T ss_pred             HeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccC---CCEEEEEEEEEcCCCceEEEEEecC
Confidence            3445678899999999999887668999988643 35667889999888853   3466666654332347899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       271 ~g~L  274 (450)
T 1k9a_A          271 KGSL  274 (450)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            9753

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.27  E-value=5.6e-06  Score=75.20  Aligned_cols=78  Identities=15%  Similarity=0.113  Sum_probs=51.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           52 HITKICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      ...-++.+|.|....||++...    ++ .+.+|+....       ....+..|..+++.+.+   -.+++++..... .
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~   93 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH---PFIVDLIYAFQT-G   93 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC---TTBCCEEEEEEC-S
T ss_pred             HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC---CCccceeEEEEc-C
Confidence            3445677899999999999762    33 6888987532       12446678888888753   346666655443 4


Q ss_pred             CceEEEEeeecCCC
Q 020294          120 GGSYIIMEFIEFGS  133 (328)
Q Consensus       120 ~~~~~v~e~l~G~~  133 (328)
                      +..++||||++|+.
T Consensus        94 ~~~~lv~e~~~~~~  107 (327)
T 3a62_A           94 GKLYLILEYLSGGE  107 (327)
T ss_dssp             SCEEEEEECCTTEE
T ss_pred             CEEEEEEeCCCCCc
Confidence            68899999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.26  E-value=7.9e-06  Score=74.37  Aligned_cols=80  Identities=14%  Similarity=0.139  Sum_probs=57.6

Q ss_pred             ceeeeeeeCCcccceeEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|..+.||++..      .++ .+++|+....    ....+..|+.+++.|..+  -.+++++..... .+
T Consensus        46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~  122 (344)
T 1rjb_A           46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--ENIVNLLGACTL-SG  122 (344)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEee-CC
Confidence            445577889999999999985      122 6889987532    245678899999999543  346677766543 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus       123 ~~~lv~e~~~~g~L  136 (344)
T 1rjb_A          123 PIYLIFEYCCYGDL  136 (344)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ccEEEEecCCCCcH
Confidence            78999999999753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.26  E-value=1.6e-05  Score=71.28  Aligned_cols=78  Identities=17%  Similarity=0.151  Sum_probs=55.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ...-.+.+|.|....||++.... + .+++|......   ...+..|+++++.|.+   -.+++++..... ++..++||
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~   86 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH---PNVLKFIGVLYK-DKRLNFIT   86 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---cCcccEEEEEec-CCeeEEEE
Confidence            44556788999999999998643 3 78888765422   3456778888877743   346666665543 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        87 e~~~~~~   93 (310)
T 3s95_A           87 EYIKGGT   93 (310)
T ss_dssp             ECCTTCB
T ss_pred             EecCCCc
Confidence            9999975

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.26  E-value=4e-06  Score=74.88  Aligned_cols=77  Identities=17%  Similarity=0.133  Sum_probs=53.0

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|....||+.... ++ .+++|.....   .   ...+.+|+..++.+.+   -.+++++..... .+..+++
T Consensus        14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv   89 (294)
T 4eqm_A           14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH---QNIVSMIDVDEE-DDCYYLV   89 (294)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC---CCCceEEEeeee-CCeEEEE
Confidence            34677899999999999754 33 7888976321   1   2345677777766643   346667766543 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        90 ~e~~~g~~L   98 (294)
T 4eqm_A           90 MEYIEGPTL   98 (294)
T ss_dssp             EECCCSCBH
T ss_pred             EeCCCCCCH
Confidence            999999753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.26  E-value=2.6e-05  Score=70.58  Aligned_cols=95  Identities=12%  Similarity=0.182  Sum_probs=65.0

Q ss_pred             CChhHHHHHHHhc-CCC---cceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCC
Q 020294           35 LSDDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRT  105 (328)
Q Consensus        35 ~~~~~i~~~l~~~-~~~---~~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~  105 (328)
                      .+.+++.+.+... +.+   ......+.+|.|..+.||+.... +| .+++|+....   ....+..|+..++.+.+   
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---  101 (321)
T 2c30_A           25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---  101 (321)
T ss_dssp             CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC---
T ss_pred             CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC---
Confidence            5778888888765 221   12345678999999999999875 34 7889987532   23456778887777643   


Q ss_pred             CCcccceeccccCCCceEEEEeeecCCC
Q 020294          106 IRAPRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       106 v~VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      -.+.+++..... .+..+++|||++|+.
T Consensus       102 ~niv~~~~~~~~-~~~~~lv~e~~~~~~  128 (321)
T 2c30_A          102 FNVVEMYKSYLV-GEELWVLMEFLQGGA  128 (321)
T ss_dssp             TTBCCEEEEEEE-TTEEEEEECCCCSCB
T ss_pred             CCcceEEEEEEE-CCEEEEEEecCCCCC
Confidence            245556654433 467899999999975

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.25  E-value=3.7e-06  Score=73.51  Aligned_cols=78  Identities=19%  Similarity=0.135  Sum_probs=57.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.++.|..+.||+....++ .+++|.....  ....+..|.+.++.+.+   -.+++++..... .+..+++||+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   84 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVTEF   84 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSCEEEECC
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCCeEEEEeC
Confidence            345567789999999999987554 7899988643  34567788888887743   346666665443 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        85 ~~~~~   89 (267)
T 3t9t_A           85 MEHGC   89 (267)
T ss_dssp             CTTCB
T ss_pred             CCCCc
Confidence            99875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.25  E-value=5e-06  Score=74.10  Aligned_cols=78  Identities=21%  Similarity=0.225  Sum_probs=53.4

Q ss_pred             eeeeeeeCCcccceeEEEEe-----CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCc
Q 020294           53 ITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-----~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~  121 (328)
                      ..-++.+|.|..+.||++..     .++ .+++|.....    ....+..|+++++.+.+   -.+++++...... ...
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH---ENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC---CC
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCC---CCeeeeeeEEecCCCce
Confidence            45577889999999999973     233 7899987632    23557788888888753   3466666554332 245


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .+++|||++|+.
T Consensus       100 ~~lv~e~~~~~~  111 (302)
T 4e5w_A          100 IKLIMEFLPSGS  111 (302)
T ss_dssp             EEEEEECCTTCB
T ss_pred             EEEEEEeCCCCc
Confidence            789999999975

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.25  E-value=7e-06  Score=72.36  Aligned_cols=77  Identities=23%  Similarity=0.229  Sum_probs=57.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.+|.|..+.||+....++ .+++|.....  ....+..|+++++.+.+   -.+++++....  ++..+++|||
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~~~v~e~   88 (279)
T 1qpc_A           14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH---QRLVRLYAVVT--QEPIYIITEY   88 (279)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEEEC
T ss_pred             hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCC---cCcceEEEEEc--CCCcEEEEec
Confidence            445577889999999999987665 7889987642  34667889999988853   24556665543  3568999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|++
T Consensus        89 ~~~~~   93 (279)
T 1qpc_A           89 MENGS   93 (279)
T ss_dssp             CTTCB
T ss_pred             CCCCC
Confidence            99875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.24  E-value=3.5e-06  Score=75.00  Aligned_cols=81  Identities=17%  Similarity=0.053  Sum_probs=54.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--C-CCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~-~~~~~~v~e~  128 (328)
                      ...-++.+|.|....||+....+..+++|+........+..|.+++..+.-. .-.+.+++.....  . .+..+++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~   87 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR-HENILGFIASDMTSRHSSTQLWLITHY   87 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             cEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhcc-CcCeeeEEEeeccccCCCceeEEehhh
Confidence            4455678899999999999887668999998654444555677776664211 1235555544221  1 2457999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        88 ~~~g~   92 (301)
T 3q4u_A           88 HEMGS   92 (301)
T ss_dssp             CTTCB
T ss_pred             ccCCC
Confidence            99975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.23  E-value=9.1e-06  Score=74.63  Aligned_cols=79  Identities=14%  Similarity=0.045  Sum_probs=55.0

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-.+.+|.|..+.||++... ++ .|++|+...      .....+..|..++..+.++  -.+++++..... .+..++
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h--p~iv~l~~~~~~-~~~~~l   95 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHMFCTFQT-KENLFF   95 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC--CCCCcEEEEEEe-CCEEEE
Confidence            344667899999999999874 34 788898642      2234466788888776443  345666655443 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus        96 v~E~~~gg~L  105 (345)
T 1xjd_A           96 VMEYLNGGDL  105 (345)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.22  E-value=8.2e-06  Score=73.84  Aligned_cols=81  Identities=14%  Similarity=-0.016  Sum_probs=52.0

Q ss_pred             eeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~v~e~l  129 (328)
                      ..-++.+|.|..+.||+....+..+++|+...........|.+++..+.-. .-.+.+++......   ....+++|||+
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~lv~e~~  117 (337)
T 3mdy_A           39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMR-HENILGFIAADIKGTGSWTQLYLITDYH  117 (337)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred             eEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhc-CCCeeeEEEEEccCCCCCCceEEEEecc
Confidence            345677899999999999887668999987543333344555554433211 12355555543321   15679999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+.+
T Consensus       118 ~~g~L  122 (337)
T 3mdy_A          118 ENGSL  122 (337)
T ss_dssp             TTCBH
T ss_pred             CCCcH
Confidence            99753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.22  E-value=1.1e-05  Score=75.74  Aligned_cols=76  Identities=13%  Similarity=0.077  Sum_probs=51.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      .-++.||.|....||+.... +| .+.+|+-....     ...+.+|+++|+.|.+-   .+-+++......     .+.
T Consensus        57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD---NIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCT---TBCCEEEECCCSSCTTTCCC
T ss_pred             EEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCC---CcceEeeeeecccccccCCE
Confidence            44678999999999999763 34 78889865321     23456799999988542   344555432211     356


Q ss_pred             eEEEEeeecCC
Q 020294          122 SYIIMEFIEFG  132 (328)
Q Consensus       122 ~~~v~e~l~G~  132 (328)
                      .|+||||++|.
T Consensus       134 ~~ivmE~~~g~  144 (398)
T 4b99_A          134 VYVVLDLMESD  144 (398)
T ss_dssp             EEEEEECCSEE
T ss_pred             EEEEEeCCCCC
Confidence            79999999874

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.22  E-value=5e-06  Score=76.49  Aligned_cols=79  Identities=10%  Similarity=-0.016  Sum_probs=55.4

Q ss_pred             eeeeeeeCCcccceeEEEEeC----C-ccEEEEecCC-------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           53 ITKICPVGGGCINLASRYGTD----A-GSFFVKTNRS-------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~----~-~~~vlK~~~~-------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ..-++.+|.|....||++...    + ..+.+|+...       .....+..|.++++.+.++  -.+++++..... .+
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~  132 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-ET  132 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC--TTBCCEEEEEEE-TT
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCC--CceeEEEEEEee-Cc
Confidence            344677899999999999862    3 3788898642       1234566799999999754  245556554433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++|+.+
T Consensus       133 ~~~lv~e~~~~~~L  146 (355)
T 1vzo_A          133 KLHLILDYINGGEL  146 (355)
T ss_dssp             EEEEEECCCCSCBH
T ss_pred             eEEEEeecCCCCCH
Confidence            78999999999753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.21  E-value=4.6e-06  Score=76.75  Aligned_cols=78  Identities=15%  Similarity=0.071  Sum_probs=52.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|....||++... ++ .+++|+...      .....+..|..+++.+.+   -.+++++..... .+..+
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~  117 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF---PFLVKLEFSFKD-NSNLY  117 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEE
Confidence            3445778899999999999874 33 789998642      123445667777766532   235555554433 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +||||++|+.
T Consensus       118 lv~e~~~gg~  127 (350)
T 1rdq_E          118 MVMEYVAGGE  127 (350)
T ss_dssp             EEEECCTTCB
T ss_pred             EEEcCCCCCc
Confidence            9999999975

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.21  E-value=5.6e-06  Score=77.96  Aligned_cols=79  Identities=13%  Similarity=0.071  Sum_probs=56.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|....||++.... + .|.+|+...      .....+..|..+++.+.+   -.+.+++..... .+..+
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~  145 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLY  145 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEE
Confidence            44556778999999999998753 3 688887632      234567789988887743   345666655443 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       146 lV~E~~~gg~L  156 (410)
T 3v8s_A          146 MVMEYMPGGDL  156 (410)
T ss_dssp             EEECCCTTEEH
T ss_pred             EEEeCCCCCcH
Confidence            99999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.21  E-value=9.5e-06  Score=73.17  Aligned_cols=80  Identities=14%  Similarity=0.021  Sum_probs=56.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~  122 (328)
                      .-.-++.++.|....||+.... + ..+++|+...  .....+..|...++.+.++  -.+++++......     .+..
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~  102 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQL  102 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCS--TTBCCEEEEEEECC--CCCCEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCC--CCeeeeeeEEeeccCccccceE
Confidence            3455677899999999999873 3 3788998753  2346678899999888543  2456666553321     3577


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++|||++|+.
T Consensus       103 ~lv~e~~~~~~  113 (326)
T 2x7f_A          103 WLVMEFCGAGS  113 (326)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEcCCCCc
Confidence            99999999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.21  E-value=5e-06  Score=75.75  Aligned_cols=76  Identities=16%  Similarity=0.120  Sum_probs=54.3

Q ss_pred             eeeeeeCCcccceeEEEEe-CCc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.+|.|..+.||+... .++ .+++|+....  .   ...+.+|+++++.+.+   -.+++++..... .+..++||
T Consensus        18 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~-~~~~~lv~   93 (328)
T 3fe3_A           18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH---PNIVKLFEVIET-EKTLYLIM   93 (328)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEE
Confidence            4467789999999999986 334 7888986431  1   2345678888888853   346667766543 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        94 e~~~~~~  100 (328)
T 3fe3_A           94 EYASGGE  100 (328)
T ss_dssp             CCCTTCB
T ss_pred             ECCCCCc
Confidence            9999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.21  E-value=1.1e-05  Score=72.04  Aligned_cols=78  Identities=14%  Similarity=0.102  Sum_probs=51.9

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----------------------------cchHHHHHHHHHHHHh
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----------------------------PSMFEGEALGLGAMYE  102 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----------------------------~~~~~~E~~~l~~L~~  102 (328)
                      .-.+.+|.|....||+.... ++ .+++|+.....                             ...+..|+++++.|.+
T Consensus        16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   95 (298)
T 2zv2_A           16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH   95 (298)
T ss_dssp             EEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC
T ss_pred             EEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC
Confidence            34567899999999999764 33 68889864311                             2456788988888743


Q ss_pred             cCCCCcccceeccccC-CCceEEEEeeecCCCC
Q 020294          103 TRTIRAPRPFKVGALP-TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       103 ~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~~~  134 (328)
                         -.+++++...... .+..+++|||++|+.+
T Consensus        96 ---~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l  125 (298)
T 2zv2_A           96 ---PNVVKLVEVLDDPNEDHLYMVFELVNQGPV  125 (298)
T ss_dssp             ---TTBCCEEEEEECSSSSEEEEEEECCTTCBS
T ss_pred             ---CCCCeEEEEEEcCCCCEEEEEEecCCCCcH
Confidence               2466666654332 3578999999998765

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.21  E-value=1.3e-05  Score=74.47  Aligned_cols=80  Identities=16%  Similarity=0.092  Sum_probs=56.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294           52 HITKICPVGGGCINLASRYGTD--------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  118 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~  118 (328)
                      ...-.+.+|.|..+.||++...        . ..+++|+.....    ...+..|+++++.+.++  -.+++++..... 
T Consensus        70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-  146 (382)
T 3tt0_A           70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-  146 (382)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-
T ss_pred             heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCC--chhhhheeeecc-
Confidence            3445677899999999998742        1 158899876432    24467899999988543  356677766543 


Q ss_pred             CCceEEEEeeecCCCC
Q 020294          119 TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 ~~~~~~v~e~l~G~~~  134 (328)
                      .+..++||||++|+.+
T Consensus       147 ~~~~~lv~e~~~~g~L  162 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNL  162 (382)
T ss_dssp             SSSCEEEEECCTTCBH
T ss_pred             CCceEEEEEecCCCcH
Confidence            4678999999999753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.20  E-value=1.3e-05  Score=71.14  Aligned_cols=79  Identities=11%  Similarity=0.030  Sum_probs=55.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC------------cchHHHHHHHHHHHHhcCCCCcccceecccc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL  117 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~  117 (328)
                      .-.-.+.++.|..+.||++... ++ .+++|+.....            ...+..|+++++.+.++  -.+++++.....
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~   95 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--PNIIQLKDTYET   95 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC--CCEeeeeeeecc
Confidence            3445677888999999999874 33 78999875321            23456788888888643  346666665543


Q ss_pred             CCCceEEEEeeecCCC
Q 020294          118 PTGGSYIIMEFIEFGS  133 (328)
Q Consensus       118 ~~~~~~~v~e~l~G~~  133 (328)
                       .+..++|||+++|+.
T Consensus        96 -~~~~~lv~e~~~~~~  110 (298)
T 1phk_A           96 -NTFFFLVFDLMKKGE  110 (298)
T ss_dssp             -SSEEEEEEECCTTCB
T ss_pred             -CCeEEEEEeccCCCc
Confidence             467899999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.20  E-value=6.5e-06  Score=76.36  Aligned_cols=79  Identities=13%  Similarity=0.195  Sum_probs=51.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+...+.+|.|....||+.... ++ .+++|+....   ....+..|+++++.|.+   -.+++++..... .+..++||
T Consensus        90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~  165 (373)
T 2x4f_A           90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH---ANLIQLYDAFES-KNDIVLVM  165 (373)
T ss_dssp             EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEE
Confidence            3445677999999999998763 34 7889987643   23457788888877743   346667766543 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       166 E~~~~~~L  173 (373)
T 2x4f_A          166 EYVDGGEL  173 (373)
T ss_dssp             ECCTTCEE
T ss_pred             eCCCCCcH
Confidence            99999754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.20  E-value=5.1e-06  Score=76.03  Aligned_cols=81  Identities=17%  Similarity=0.175  Sum_probs=57.3

Q ss_pred             ceeeeeeeCCcccceeEEEEe------CCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|....||+...      .++ .+++|......    ...+..|+++++.|.++  -.+.+++......++
T Consensus        23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pniv~~~~~~~~~~~  100 (359)
T 3vhe_A           23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  100 (359)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSTTS
T ss_pred             ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCC--cceeeeeeeeecCCC
Confidence            455577889999999999963      222 68899876422    23477899999998653  346677766543345


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus       101 ~~~iv~e~~~~g~L  114 (359)
T 3vhe_A          101 PLMVIVEFCKFGNL  114 (359)
T ss_dssp             CCEEEEECCTTEEH
T ss_pred             ceEEEEEecCCCcH
Confidence            68999999999753

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.20  E-value=6.5e-06  Score=75.33  Aligned_cols=77  Identities=13%  Similarity=-0.015  Sum_probs=52.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|..+.||++... ++ .+++|+...      .....+..|..+++.+.+   -.+++++..... .+..++|
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~-~~~~~lv   83 (337)
T 1o6l_A            8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFV   83 (337)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC---CcCcceEEEEEe-CCEEEEE
Confidence            44677899999999999864 33 788998642      223446677777766532   245555555433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        84 ~E~~~gg~L   92 (337)
T 1o6l_A           84 MEYANGGEL   92 (337)
T ss_dssp             EECCTTCBH
T ss_pred             EeCCCCCcH
Confidence            999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.20  E-value=1.8e-05  Score=71.11  Aligned_cols=76  Identities=20%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...-.+.+|.|..+.||+....+..+++|...... ...+..|++.++.+.+   -.+.+++....   +..++||||++
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~---~~~~lv~e~~~   82 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNH---PNIVKLYGACL---NPVCLVMEYAE   82 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCC---TTBCCEEEBCT---TTTEEEEECCT
T ss_pred             HeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCC---CCcCeEEEEEc---CCcEEEEEcCC
Confidence            34456778999999999998877789999886432 4557788888887743   24556665543   45799999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus        83 ~~~   85 (307)
T 2eva_A           83 GGS   85 (307)
T ss_dssp             TCB
T ss_pred             CCC
Confidence            975

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.19  E-value=7.7e-06  Score=74.19  Aligned_cols=77  Identities=17%  Similarity=0.152  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|..+.||++... ++ .+++|+...      .....+..|..+++.+.+   -.+.+++..... .+..++|
T Consensus         9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv   84 (318)
T 1fot_A            9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH---PFIIRMWGTFQD-AQQIFMI   84 (318)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC---CCCceEeEEEEe-CCEEEEE
Confidence            34567889999999999874 34 788898642      223445677777776633   245566655433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus        85 ~e~~~gg~L   93 (318)
T 1fot_A           85 MDYIEGGEL   93 (318)
T ss_dssp             ECCCCSCBH
T ss_pred             EeCCCCCCH
Confidence            999999753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.19  E-value=1.1e-05  Score=73.18  Aligned_cols=75  Identities=15%  Similarity=0.075  Sum_probs=54.4

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      -.+.+|.|....||++.... + .+++|......  ...+..|+.+++.+.+   -.+++++..... .+..+++|||++
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~e~~~   84 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH---RNILHLHESFES-MEELVMIFEFIS   84 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC---TTBCCEEEEEEE-TTEEEEEECCCC
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCC---CCCCeEeEEEec-CCEEEEEEEeCC
Confidence            35678999999999998643 3 78888875432  3456789998888753   346666665443 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus        85 g~~   87 (321)
T 1tki_A           85 GLD   87 (321)
T ss_dssp             CCB
T ss_pred             CCC
Confidence            975

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.19  E-value=6e-06  Score=74.99  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=57.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-++.+|.|..+.||+....+       ..+++|......    ...+..|+.+++.+.+   -.+++++..... .+
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~  123 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN---PNIVKLLGVCAV-GK  123 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SS
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcc-CC
Confidence            45567789999999999998642       368899876432    2446778888887743   346667765543 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus       124 ~~~lv~e~~~~~~L  137 (343)
T 1luf_A          124 PMCLLFEYMAYGDL  137 (343)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEecCCCCcH
Confidence            78999999999754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.19  E-value=8.3e-06  Score=72.43  Aligned_cols=73  Identities=16%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             eeeeeCCcccceeEEEEeCCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.+|.|....||++...++ .+++|.....     ....+.+|+++++.+.+   -.+++++..... .+..+++||+
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   81 (288)
T 1ob3_A            6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH---SNIVKLYDVIHT-KKRLVLVFEH   81 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC---TTBCCEEEEEEC-SSCEEEEEEC
T ss_pred             hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC---CCEeeeeeEEcc-CCeEEEEEEe
Confidence            356789999999999987645 7888987532     13456678888777743   346666665543 4678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        82 ~~~   84 (288)
T 1ob3_A           82 LDQ   84 (288)
T ss_dssp             CSE
T ss_pred             cCC
Confidence            987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.19  E-value=1.9e-05  Score=71.70  Aligned_cols=79  Identities=16%  Similarity=0.130  Sum_probs=55.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294           52 HITKICPVGGGCINLASRYGTD--------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  118 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~  118 (328)
                      ...-.+.+|.|..+.||++...        ++ .+++|+.....    ...+..|.++++.+.++  -.+++++..... 
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-  112 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-  112 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-
T ss_pred             HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC--CCEeeEEEEEcc-
Confidence            3445678899999999999752        22 68899876432    23467889989888543  346667766543 


Q ss_pred             CCceEEEEeeecCCC
Q 020294          119 TGGSYIIMEFIEFGS  133 (328)
Q Consensus       119 ~~~~~~v~e~l~G~~  133 (328)
                      .+..++||||++|+.
T Consensus       113 ~~~~~lv~e~~~~~~  127 (334)
T 2pvf_A          113 DGPLYVIVEYASKGN  127 (334)
T ss_dssp             SSCCEEEEECCTTCB
T ss_pred             CCceEEEEECCCCCc
Confidence            467899999999975

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.19  E-value=1.4e-05  Score=72.18  Aligned_cols=76  Identities=14%  Similarity=0.084  Sum_probs=53.4

Q ss_pred             eeeeeCCcccceeEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           55 KICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      -.+.+|.|....||+....++ .+++|......   ...+..|+..++.+.+   -.+++++..... .+..++||||++
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~  118 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRH---PHLVSLIGFCDE-RNEMILIYKYME  118 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCC---TTBCCEEEECCC-TTCCEEEEECCT
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEEcCC
Confidence            355688899999999987654 78899875432   2446677777666642   346666665443 467899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       119 ~~~L  122 (321)
T 2qkw_B          119 NGNL  122 (321)
T ss_dssp             TCBT
T ss_pred             CCcH
Confidence            9865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.19  E-value=1.1e-05  Score=70.73  Aligned_cols=78  Identities=18%  Similarity=-0.004  Sum_probs=54.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ...-.+.+|.|..+.||+....+..+++|+....       ....+..|.+.++.+.+   -.+++++..... .+..++
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   83 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH---PNIIALRGVCLK-EPNLCL   83 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCC---TTBCCEEEEECC-C--CEE
T ss_pred             heeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC---CCEeeEEEEEec-CCceEE
Confidence            3445677899999999999887678999987532       12456778888887753   346666666543 457899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +|||++|+.
T Consensus        84 v~e~~~~~~   92 (271)
T 3dtc_A           84 VMEFARGGP   92 (271)
T ss_dssp             EEECCTTEE
T ss_pred             EEEcCCCCC
Confidence            999999875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.19  E-value=6.2e-06  Score=78.29  Aligned_cols=79  Identities=13%  Similarity=0.052  Sum_probs=55.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|....||++...+ + .|.+|+...      .....+..|..++..+.+   -.+.+++..... .+..+
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h---p~Iv~l~~~~~~-~~~~~  150 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS---KWITTLHYAFQD-DNNLY  150 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT---TTBCCEEEEEEC-SSEEE
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEee-CCEEE
Confidence            44557788999999999998754 3 688887642      223457788888877643   245566655443 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       151 lV~Ey~~gg~L  161 (437)
T 4aw2_A          151 LVMDYYVGGDL  161 (437)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEecCCCCcH
Confidence            99999999853

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.18  E-value=4.9e-06  Score=73.41  Aligned_cols=76  Identities=13%  Similarity=0.033  Sum_probs=52.8

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.+|.|..+.||++.... + .+++|+...      .....+..|+.+++.+.+   -.+++++..... .+..+++
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   87 (279)
T 3fdn_A           12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH---PNILRLYGYFHD-ATRVYLI   87 (279)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC---CCCcchhheEec-CCEEEEE
Confidence            346678899999999997654 3 688898642      123446677777766643   346667766543 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|+.
T Consensus        88 ~e~~~~~~   95 (279)
T 3fdn_A           88 LEYAPLGT   95 (279)
T ss_dssp             ECCCTTEE
T ss_pred             EecCCCCc
Confidence            99999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.18  E-value=6.7e-06  Score=73.13  Aligned_cols=74  Identities=18%  Similarity=0.081  Sum_probs=51.0

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.+|.|..+.||++.... + .+++|......     ...+.+|+.+++.+.+   -.+.+++..... ++..++|||
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e   81 (292)
T 3o0g_A            6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH---KNIVRLHDVLHS-DKKLTLVFE   81 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEEE
T ss_pred             eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC---CCEeeEEeEEEe-CCEEEEEEe
Confidence            46678999999999998743 3 68889875321     2345677877777643   245566655433 467899999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      |++|.
T Consensus        82 ~~~~~   86 (292)
T 3o0g_A           82 FCDQD   86 (292)
T ss_dssp             CCSEE
T ss_pred             cCCCC
Confidence            99874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.18  E-value=7.5e-06  Score=74.25  Aligned_cols=77  Identities=12%  Similarity=0.043  Sum_probs=54.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .-++.+|.|..+.||++... ++ .+++|+....    ....+..|+.+++.+.+   -.+++++..... .+..+++||
T Consensus        10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~e   85 (323)
T 3tki_A           10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFLE   85 (323)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CCeEEEEEE
Confidence            44677899999999999764 33 7888986431    23567889998888853   346667766543 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        86 ~~~~~~L   92 (323)
T 3tki_A           86 YCSGGEL   92 (323)
T ss_dssp             CCTTEEG
T ss_pred             cCCCCcH
Confidence            9999754

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.18  E-value=2.5e-05  Score=69.94  Aligned_cols=78  Identities=14%  Similarity=0.061  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC----
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----  119 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~----  119 (328)
                      .-++.+|.|..+.||++... + ..+++|+....        ....+.+|.+.++.|.....-.+++++.......    
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~   91 (308)
T 3g33_A           12 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRE   91 (308)
T ss_dssp             EEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCc
Confidence            34677899999999999853 3 37888986421        1245678999999887532235666666543321    


Q ss_pred             CceEEEEeeecC
Q 020294          120 GGSYIIMEFIEF  131 (328)
Q Consensus       120 ~~~~~v~e~l~G  131 (328)
                      ...+++||+++|
T Consensus        92 ~~~~lv~e~~~~  103 (308)
T 3g33_A           92 IKVTLVFEHVDQ  103 (308)
T ss_dssp             EEEEEEEECCCC
T ss_pred             eeEEEEehhhhc
Confidence            146899999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.18  E-value=9.6e-06  Score=72.74  Aligned_cols=78  Identities=13%  Similarity=0.041  Sum_probs=52.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.+|.|....||++.... + .+++|..... ....+..|+..++.+.+   -.+++++..... .+..+++|||
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~  105 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS---PHVVKYYGSYFK-NTDLWIVMEY  105 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCC---CCCccEEEEEEe-CCEEEEEeec
Confidence            34556778999999999998653 4 7889987643 34567788888887743   346666665433 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus       106 ~~~~~  110 (314)
T 3com_A          106 CGAGS  110 (314)
T ss_dssp             CTTEE
T ss_pred             CCCCC
Confidence            99875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.18  E-value=1e-05  Score=75.02  Aligned_cols=77  Identities=21%  Similarity=0.111  Sum_probs=54.7

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ..-.+.+|.|..+.||+.... ++ .+++|......    ...+..|+++++.+.+   -.+.+++..... .+..++||
T Consensus       116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~  191 (377)
T 3cbl_A          116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVM  191 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCC---TTBCCEEEEECS-SSSCEEEE
T ss_pred             eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEec-CCCcEEEE
Confidence            344677899999999999875 33 78889876421    2346678888877743   346667766543 45789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus       192 e~~~~g~  198 (377)
T 3cbl_A          192 ELVQGGD  198 (377)
T ss_dssp             ECCTTCB
T ss_pred             EcCCCCC
Confidence            9999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.18  E-value=5.9e-06  Score=74.97  Aligned_cols=78  Identities=21%  Similarity=0.085  Sum_probs=54.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...-.+.+|.|..+.||+.... ++    .+++|......    ...+..|+.+++.|.+   -.+++++..... .+..
T Consensus        50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~  125 (325)
T 3kul_A           50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH---PNIIRLEGVVTR-GRLA  125 (325)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECG-GGCC
T ss_pred             HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCcc
Confidence            4455677899999999998763 22    48899876421    2346678888777743   346666665543 3577


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      ++||||++|+.
T Consensus       126 ~lv~e~~~~~~  136 (325)
T 3kul_A          126 MIVTEYMENGS  136 (325)
T ss_dssp             EEEEECCTTCB
T ss_pred             EEEeeCCCCCc
Confidence            99999999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.17  E-value=5.4e-06  Score=76.42  Aligned_cols=79  Identities=13%  Similarity=0.026  Sum_probs=52.9

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-++.+|.|..+.||++.... + .|++|+...      .....+..|..++..+.++  -.+++++..... .+..++
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~l~~~~~~-~~~~~l   98 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYF   98 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCC--TTBCCEEEEEEC-SSEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCC--CEEeeEEEEEEc-CCEEEE
Confidence            4446778999999999998754 3 688998652      1234455677666655332  235555555433 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus        99 v~E~~~gg~L  108 (353)
T 2i0e_A           99 VMEYVNGGDL  108 (353)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.17  E-value=7.7e-06  Score=77.03  Aligned_cols=79  Identities=15%  Similarity=0.051  Sum_probs=55.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|....||++... ++ .|.+|+...      .....+..|..++..+.+   -.+.+++..... .+..|
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h---p~Iv~l~~~~~~-~~~~~  137 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR---RWITQLHFAFQD-ENYLY  137 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT---TTBCCEEEEEEC-SSEEE
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEee-CCEEE
Confidence            4555777899999999999874 33 788998642      123457788888876643   245566655443 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       138 lVmE~~~gg~L  148 (412)
T 2vd5_A          138 LVMEYYVGGDL  148 (412)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEcCCCCCcH
Confidence            99999999853

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.17  E-value=1.3e-06  Score=79.47  Aligned_cols=46  Identities=13%  Similarity=-0.015  Sum_probs=35.7

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHH
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMY  101 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~  101 (328)
                      ++.+|.|....||++...+..+++|+.....           ...+..|+.+++.|.
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   81 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELS   81 (336)
T ss_dssp             CEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHH
T ss_pred             eeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHH
Confidence            4568889999999998865689999875321           155788999999887

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.16  E-value=1.8e-05  Score=70.23  Aligned_cols=78  Identities=15%  Similarity=0.011  Sum_probs=55.4

Q ss_pred             ceeeeeeeCCcccceeEEEEe-CC-ccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGT-DA-GSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-~~-~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-.-.+.++.|..+.||+... .+ ..+++|+... .....+..|..+++.+.+.  -.+|.+...... .+..+++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~   86 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMEL   86 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTS--TTCCCEEEEEEE-TTEEEEEEEC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcC--CCCCccccccCC-CCceEEEEEe
Confidence            345567788999999999985 33 3889998653 2345688999999999864  345555544332 4677999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      + |+.
T Consensus        87 ~-~~~   90 (296)
T 3uzp_A           87 L-GPS   90 (296)
T ss_dssp             C-CCB
T ss_pred             c-CCC
Confidence            9 543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.16  E-value=2e-05  Score=71.22  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=55.4

Q ss_pred             ceeeeeeeCCcccceeEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCc
Q 020294           52 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~  121 (328)
                      ...-++.+|.|..+.||++..     .++ .+++|......   ...+.+|+++++.|..   -.+++++...... ...
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS---DFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEECSSSCE
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCC---CceeEEEEEEecCCCce
Confidence            455678899999999999973     233 78899876532   2446788888888843   3455665543221 356


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+.+
T Consensus       101 ~~lv~e~~~~~~L  113 (327)
T 3lxl_A          101 LRLVMEYLPSGCL  113 (327)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEeecCCCCH
Confidence            7899999998753

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.16  E-value=1.4e-05  Score=73.76  Aligned_cols=78  Identities=17%  Similarity=0.039  Sum_probs=56.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -.-++.+|.|..+.||++... ++ .+++|+....  ....+.+|+..++.|.+   -.+.+++..... .+..++||||
T Consensus        22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~   97 (361)
T 3uc3_A           22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH---PNIVRFKEVILT-PTHLAIIMEY   97 (361)
T ss_dssp             EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEEC
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCC---CCCCcEEEEEee-CCEEEEEEEe
Confidence            344677999999999999875 33 7889987532  24567789988888854   245666665443 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        98 ~~~~~L  103 (361)
T 3uc3_A           98 ASGGEL  103 (361)
T ss_dssp             CCSCBH
T ss_pred             CCCCCH
Confidence            998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.16  E-value=1.1e-05  Score=74.33  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=54.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .+.=.+.+|.|....||+.....      + .+.+|.-....    ...+..|+++|..|.++  -.+-+++.+.....+
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hh--pnIV~l~g~~~~~~~  142 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  142 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECCTTS
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCC--CcEEEEEEEEEecCC
Confidence            34446779999999999986421      1 46677764321    24477899999988653  236666665433234


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++|+.+
T Consensus       143 ~~~iV~Ey~~~G~L  156 (353)
T 4ase_A          143 PLMVIVEFCKFGNL  156 (353)
T ss_dssp             CCEEEEECCTTEEH
T ss_pred             EEEEEEEcCCCCCH
Confidence            67999999999854

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.15  E-value=2.3e-05  Score=71.85  Aligned_cols=78  Identities=13%  Similarity=0.016  Sum_probs=52.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC---C-----------cchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI---G-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGA  116 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~---~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~  116 (328)
                      .-.-.+.+|.|..+.||++...++ .+++|.....   .           ...+..|+++++.+.+   -.+.+++....
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~   99 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH---PNILGLRDIFV   99 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEEE
T ss_pred             ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC---cCccceeeeEE
Confidence            444567789999999999976655 7889976421   1           1456789988888853   23444444321


Q ss_pred             c---C-CCceEEEEeeecCC
Q 020294          117 L---P-TGGSYIIMEFIEFG  132 (328)
Q Consensus       117 ~---~-~~~~~~v~e~l~G~  132 (328)
                      .   . ....++|||+++|.
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~  119 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTD  119 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEE
T ss_pred             eccCCCcceEEEEEccCCCC
Confidence            1   1 24679999999873

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.15  E-value=8.3e-06  Score=74.81  Aligned_cols=79  Identities=8%  Similarity=0.018  Sum_probs=54.4

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-++.+|.|..+.||++.... + .+++|+....   .   ...+..|..+++.+.++  -.+.+++..... .+..++
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~l~~~~~~-~~~~~l   87 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFF   87 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCC--CccCeEEEEEEe-CCEEEE
Confidence            3446778999999999998743 3 7888987531   1   23356788887776443  245666665443 468899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus        88 v~e~~~gg~L   97 (345)
T 3a8x_A           88 VIEYVNGGDL   97 (345)
T ss_dssp             EECCCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999753

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.15  E-value=7.1e-06  Score=76.55  Aligned_cols=77  Identities=6%  Similarity=-0.011  Sum_probs=53.8

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.-++.+|.|..+.||++.... + .|++|+...      .....+..|..+++.+.+   -.+++++..... .+..++
T Consensus        17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~l   92 (384)
T 4fr4_A           17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH---PFLVNLWYSFQD-EEDMFM   92 (384)
T ss_dssp             EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEE
Confidence            3446778999999999998653 3 688897642      223456678888877743   345556655443 467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|+.
T Consensus        93 v~e~~~gg~  101 (384)
T 4fr4_A           93 VVDLLLGGD  101 (384)
T ss_dssp             EECCCTTEE
T ss_pred             EEecCCCCc
Confidence            999999975

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.15  E-value=7e-06  Score=72.61  Aligned_cols=78  Identities=23%  Similarity=0.182  Sum_probs=57.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ...-.+.+|.|..+.||+..... + .+++|......  ...+..|+++++.+.+   -.+++++..... .+..++|||
T Consensus        14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   89 (288)
T 3kfa_A           14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITE   89 (288)
T ss_dssp             GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSEEEEEE
T ss_pred             ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCCEEEEEE
Confidence            44556778999999999998753 3 68889876432  3557789988888853   346666666543 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      +++|++
T Consensus        90 ~~~~~~   95 (288)
T 3kfa_A           90 FMTYGN   95 (288)
T ss_dssp             CCTTEE
T ss_pred             cCCCCc
Confidence            999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.15  E-value=1.4e-05  Score=70.55  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=54.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGGCINLASRYGTDA--G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...-.+.++.|....||+....+  +   .+++|.....    ....+..|..+++.|.+   -.+++++....  ++..
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~   87 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH---PHIVKLIGIIE--EEPT   87 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCC---TTBCCEEEEEC--SSSC
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCC
Confidence            34456778889999999987432  2   4888987643    13456789999998853   34666666543  3567


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++||+++|+.
T Consensus        88 ~~v~e~~~~~~   98 (281)
T 3cc6_A           88 WIIMELYPYGE   98 (281)
T ss_dssp             EEEEECCTTCB
T ss_pred             EEEEecCCCCC
Confidence            99999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.14  E-value=1.4e-05  Score=70.76  Aligned_cols=77  Identities=17%  Similarity=0.041  Sum_probs=53.1

Q ss_pred             eeeeeeeCCcccceeEEEEe-CCc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      -.-.+.+|.|..+.||++.. .++ .+++|+... .....+..|..+++.+.+.  -.++.+...... .+..+++||++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~~   87 (296)
T 4hgt_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMELL   87 (296)
T ss_dssp             CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTS--TTCCCEEEEEEE-TTEEEEEEECC
T ss_pred             eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCC--CCCCeeeeecCC-CCceEEEEEcc
Confidence            34466788899999999985 333 789997543 2345678899999999764  345555444332 46779999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                       |+.
T Consensus        88 -~~~   90 (296)
T 4hgt_A           88 -GPS   90 (296)
T ss_dssp             -CCB
T ss_pred             -CCC
Confidence             553

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.13  E-value=1.3e-05  Score=72.81  Aligned_cols=78  Identities=23%  Similarity=0.151  Sum_probs=53.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--c----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTDA--G----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-.+.+|.|....||+.....  +    .+++|......    ...+..|+.+++.+.+   -.+++++..... .+.
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~  120 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH---HNIIRLEGVISK-YKP  120 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSS
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEec-CCC
Confidence            45556788999999999986532  2    38899876432    2345677777776643   346666665543 467


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .++|||+++|+.
T Consensus       121 ~~lv~e~~~~~~  132 (333)
T 1mqb_A          121 MMIITEYMENGA  132 (333)
T ss_dssp             EEEEEECCTTEE
T ss_pred             cEEEEeCCCCCc
Confidence            899999999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.13  E-value=1.5e-05  Score=72.22  Aligned_cols=78  Identities=14%  Similarity=0.154  Sum_probs=55.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .-.-++.+|.|..+.||++.... + .+++|......     ...+..|+.+++.+.+   -.+++++..... .+..++
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~l  101 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH---ENLVNLLEVCKK-KKRWYL  101 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC---CCEeeEEEEeec-CCEEEE
Confidence            34456788999999999998753 3 78889764321     2335578888888853   346677766543 467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|+.
T Consensus       102 v~e~~~~~~  110 (331)
T 4aaa_A          102 VFEFVDHTI  110 (331)
T ss_dssp             EEECCSEEH
T ss_pred             EEecCCcch
Confidence            999999863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.13  E-value=2.2e-05  Score=70.18  Aligned_cols=80  Identities=15%  Similarity=0.181  Sum_probs=57.5

Q ss_pred             ceeeeeeeCCcccceeEEEEe------CCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|....||+...      .++ .+++|+.....    ...+..|+.+++.|.++  -.+++++..... .+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~  100 (313)
T 1t46_A           24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MNIVNLLGACTI-GG  100 (313)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccC--CCeeeEEEEEec-CC
Confidence            455567789999999999974      223 78899876432    34577899999988543  346667766543 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+++
T Consensus       101 ~~~lv~e~~~~~~L  114 (313)
T 1t46_A          101 PTLVITEYCCYGDL  114 (313)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             CcEEEEecCCCCCH
Confidence            78999999999753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.12  E-value=1e-05  Score=72.79  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=53.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|....||+....       ...+++|......    ...+..|..+++.+.+   -.+++++..... .+
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~  101 (322)
T 1p4o_A           26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQ  101 (322)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC---TTBCCEEEEECS-SS
T ss_pred             heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCC---CCEeeeEEEEcc-CC
Confidence            4455677899999999997643       2368899876432    2235567777666643   356666665443 45


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++||+++|+.+
T Consensus       102 ~~~lv~e~~~~~~L  115 (322)
T 1p4o_A          102 PTLVIMELMTRGDL  115 (322)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ccEEEEEeCCCCcH
Confidence            78999999999754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.12  E-value=1.9e-05  Score=70.75  Aligned_cols=76  Identities=13%  Similarity=0.085  Sum_probs=53.6

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.+|.|..+.||++.... + .+++|......     ...+..|+++++.+.+   -.+++++..... .+..++||
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   81 (311)
T 4agu_A            6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH---PNLVNLLEVFRR-KRRLHLVF   81 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CCccchhheeec-CCeEEEEE
Confidence            346678889999999998753 4 78889765322     2345678888888753   346666665543 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        82 e~~~~~~   88 (311)
T 4agu_A           82 EYCDHTV   88 (311)
T ss_dssp             ECCSEEH
T ss_pred             EeCCCch
Confidence            9999863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.12  E-value=1.5e-05  Score=71.15  Aligned_cols=77  Identities=17%  Similarity=0.087  Sum_probs=54.8

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ...++.+|.|..+.||+.... ++ .+++|+....    ....+..|+.+++.+.+   -.+++++..... .+..+++|
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   99 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIM   99 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEE
Confidence            455778999999999998753 33 7889987532    23556778888877743   346666665433 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus       100 e~~~~~~  106 (303)
T 3a7i_A          100 EYLGGGS  106 (303)
T ss_dssp             ECCTTEE
T ss_pred             EeCCCCc
Confidence            9999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.11  E-value=1.4e-05  Score=70.22  Aligned_cols=75  Identities=13%  Similarity=0.033  Sum_probs=53.6

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      -.+.+|.|..+.||+..... + .+++|....   .....+..|+++++.+.+   -.+++++..... .+..+++|||+
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   88 (277)
T 3f3z_A           13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH---PNIIRLYETFED-NTDIYLVMELC   88 (277)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEEECC
T ss_pred             eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCeEEEEEecc
Confidence            35668889999999998654 3 677887643   234567789988888743   346666665543 46789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        89 ~~~~   92 (277)
T 3f3z_A           89 TGGE   92 (277)
T ss_dssp             CSCB
T ss_pred             CCCc
Confidence            9875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.11  E-value=1.5e-05  Score=71.80  Aligned_cols=57  Identities=16%  Similarity=0.121  Sum_probs=38.0

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCccccee
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      .-++.+|.|..+.||++... ++ .+++|+....    ....+..|+++++.|.+   -.+.+++.
T Consensus         9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~   71 (332)
T 3qd2_B            9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH---PGIVRYFN   71 (332)
T ss_dssp             EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCC---TTBCCEEE
T ss_pred             ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCC---CCEeeEEE
Confidence            34667899999999999874 34 7899986531    23457788888887743   23455554

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.11  E-value=3e-05  Score=68.49  Aligned_cols=76  Identities=14%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC----------cchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      ...-.+.++.|....||++... + ..+++|......          ...+..|.++++.+.+   -.+++++....   
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~---   93 (287)
T 4f0f_A           20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH---PNIVKLYGLMH---   93 (287)
T ss_dssp             TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC---TTBCCEEEEET---
T ss_pred             cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC---CCchhhheeec---
Confidence            4555677899999999999874 3 378899875311          1456678887777742   34666666553   


Q ss_pred             CceEEEEeeecCCC
Q 020294          120 GGSYIIMEFIEFGS  133 (328)
Q Consensus       120 ~~~~~v~e~l~G~~  133 (328)
                      ...+++|||++|+.
T Consensus        94 ~~~~lv~e~~~~~~  107 (287)
T 4f0f_A           94 NPPRMVMEFVPCGD  107 (287)
T ss_dssp             TTTEEEEECCTTCB
T ss_pred             CCCeEEEEecCCCC
Confidence            34589999999875

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.11  E-value=9.9e-06  Score=73.72  Aligned_cols=78  Identities=9%  Similarity=-0.079  Sum_probs=54.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .-.-.+.+|.|..+.||++...+ + .+++|+....      ....+..|+.+++.+.+   -.+++++..... .+..+
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~  117 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH---QHVVGFHGFFED-NDFVF  117 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CCeEE
Confidence            34456778999999999998754 3 6788886431      13446678877777643   346666665543 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      ++|||++|+.
T Consensus       118 lv~e~~~~~~  127 (335)
T 2owb_A          118 VVLELCRRRS  127 (335)
T ss_dssp             EEECCCTTCB
T ss_pred             EEEecCCCCC
Confidence            9999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.11  E-value=2.9e-05  Score=69.07  Aligned_cols=77  Identities=14%  Similarity=0.068  Sum_probs=53.2

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.-++.+|.|..+.||++.... + .+++|+....   ....+..|...++.+.+   -.+++++..... .+..+++||
T Consensus        21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   96 (302)
T 2j7t_A           21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH---PYIVKLLGAYYH-DGKLWIMIE   96 (302)
T ss_dssp             EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-C-CEEEEEE
T ss_pred             eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCC---CCEeeeeeeeee-CCeEEEEEE
Confidence            3446778999999999998753 3 6888887542   23456678888877743   346666665443 468899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        97 ~~~~~~  102 (302)
T 2j7t_A           97 FCPGGA  102 (302)
T ss_dssp             CCTTEE
T ss_pred             eCCCCc
Confidence            999975

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.10  E-value=1.1e-05  Score=73.04  Aligned_cols=82  Identities=15%  Similarity=0.028  Sum_probs=49.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccc--cC--CCceEEEEe
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP--TGGSYIIME  127 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~--~~--~~~~~~v~e  127 (328)
                      ...-.+.+|.|..+.||+....+..+++|+........+..|.+++.. .....-.+.+++....  ..  ....++|||
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~-~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   92 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRV-PLMEHDNIARFIVGDERVTADGRMEYLLVME   92 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTS-TTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred             HhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHH-HhccCcchhhheecccccccCCCceEEEEEe
Confidence            445567789999999999987777899999764333334444444332 1111223445543221  11  235689999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        93 ~~~~g~L   99 (336)
T 3g2f_A           93 YYPNGSL   99 (336)
T ss_dssp             CCTTCBH
T ss_pred             cCCCCcH
Confidence            9999753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.10  E-value=8.2e-06  Score=73.84  Aligned_cols=80  Identities=15%  Similarity=-0.043  Sum_probs=51.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~v~  126 (328)
                      ...-.+.+|.|..+.||+....+..+++|+......  ...+.|+..++.+.+   -.+.+++......   ....++||
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH---ENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC---TTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCC---CCchhhcceeccCCCCCceEEEEE
Confidence            344567789999999999988777899999864322  223345544444422   2455555543321   23469999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       102 e~~~~g~L  109 (322)
T 3soc_A          102 AFHEKGSL  109 (322)
T ss_dssp             ECCTTCBH
T ss_pred             ecCCCCCH
Confidence            99999753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.10  E-value=1.1e-05  Score=74.15  Aligned_cols=76  Identities=11%  Similarity=-0.004  Sum_probs=52.5

Q ss_pred             eeeeeeeCCcccceeEEEEe-CCc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ...++.+|.|....||++.. .++ .+++|......      ...+..|+++++.|.+   -.+.+++..... .+..++
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~l  131 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH---PNTIQYRGCYLR-EHTAWL  131 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCeEEE
Confidence            45567899999999999985 344 68888865321      1346678888888753   235555554433 467899


Q ss_pred             EEeeecCC
Q 020294          125 IMEFIEFG  132 (328)
Q Consensus       125 v~e~l~G~  132 (328)
                      ||||++|.
T Consensus       132 v~e~~~g~  139 (348)
T 1u5q_A          132 VMEYCLGS  139 (348)
T ss_dssp             EEECCSEE
T ss_pred             EEecCCCC
Confidence            99999874

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.10  E-value=9.5e-06  Score=70.87  Aligned_cols=79  Identities=11%  Similarity=0.095  Sum_probs=53.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v  125 (328)
                      ...-.+.++.|..+.||+....+..+++|+.....     ...+..|+..++.+.+   -.+.+++...... .+..+++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH---PNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC---TTEECEEEEECTTTSSSCEEE
T ss_pred             HhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC---CchhheEEEEccCCCCCeEee
Confidence            34456778999999999999877789999986432     1235556655554422   2355555554332 2577999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|++
T Consensus        88 ~e~~~~~~   95 (271)
T 3kmu_A           88 THWMPYGS   95 (271)
T ss_dssp             EECCTTCB
T ss_pred             ecccCCCc
Confidence            99999975

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.10  E-value=9.4e-06  Score=73.51  Aligned_cols=80  Identities=14%  Similarity=0.112  Sum_probs=57.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c------cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G------SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~------~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|....||+..... +      .+++|......    ...+..|+.+++.|.++  -.+++++..... .+
T Consensus        47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~  123 (333)
T 2i1m_A           47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH--ENIVNLLGACTH-GG  123 (333)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEec-CC
Confidence            44556778999999999998532 2      58888876431    34577899999998543  356677766543 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++|+++
T Consensus       124 ~~~lv~e~~~~g~L  137 (333)
T 2i1m_A          124 PVLVITEYCCYGDL  137 (333)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             ceEEEEecCCCCcH
Confidence            78999999999753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.10  E-value=2.7e-05  Score=75.94  Aligned_cols=79  Identities=11%  Similarity=-0.035  Sum_probs=54.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|..+.||++... ++ .|++|+...      .....+..|..+++.+.+   -.+.+++..... .+..+
T Consensus       186 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h---p~Iv~l~~~~~~-~~~l~  261 (543)
T 3c4z_A          186 WFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS---RFIVSLAYAFET-KTDLC  261 (543)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC---CCEeeEEEEEee-CCEEE
Confidence            3445677899999999999874 34 788898642      123456678888887743   235555554333 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       262 lVmE~~~gg~L  272 (543)
T 3c4z_A          262 LVMTIMNGGDI  272 (543)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEEeccCCCH
Confidence            99999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.09  E-value=1.7e-05  Score=75.48  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=56.6

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .-.+.+|.|....||+....++ .+++|.....  ..+.+..|+++++.|.+   -.+.+++....  ++..++||||++
T Consensus       187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~--~~~~~iv~e~~~  261 (452)
T 1fmk_A          187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMS  261 (452)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEECCCT
T ss_pred             eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEc--CCceEEEehhhc
Confidence            3456789999999999987654 7899987643  34567889999998854   34666666543  357899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       262 ~gsL  265 (452)
T 1fmk_A          262 KGSL  265 (452)
T ss_dssp             TCBH
T ss_pred             CCCH
Confidence            9753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.09  E-value=1.4e-05  Score=70.92  Aligned_cols=76  Identities=21%  Similarity=0.139  Sum_probs=54.6

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -.+.+|.|..+.||++.... + .+++|....    .....+..|+++++.+.+   -.+++++..... .+..++||||
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e~  101 (285)
T 3is5_A           26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH---PNIIKIFEVFED-YHNMYIVMET  101 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCC---chHHhHHHheec-CCeEEEEEEe
Confidence            36778999999999998643 3 788887643    123567789988887743   346666665543 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus       102 ~~~~~L  107 (285)
T 3is5_A          102 CEGGEL  107 (285)
T ss_dssp             CSCCBH
T ss_pred             CCCCcH
Confidence            999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.09  E-value=1.7e-05  Score=71.19  Aligned_cols=75  Identities=15%  Similarity=-0.042  Sum_probs=53.1

Q ss_pred             eeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           57 CPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      +.+|.|..+.||++...  +..+++|+....   ....+.+|++.+..+.++  -.+++++..... .+..++||||++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~~~   95 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH--RNVLELIEFFEE-EDRFYLVFEKMRG   95 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCC--TTBCCEEEEEEE-TTEEEEEEECCTT
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCC--CCeeeEEEEEee-CCEEEEEEEcCCC
Confidence            45789999999998753  347899987532   235567888888775433  346667765443 4688999999998


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        96 ~~L   98 (316)
T 2ac3_A           96 GSI   98 (316)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.09  E-value=1.3e-05  Score=71.35  Aligned_cols=77  Identities=14%  Similarity=0.141  Sum_probs=50.5

Q ss_pred             eeeeeeCCcccceeEEEEeCC--c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           54 TKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .-.+.+|.|..+.||+....+  +   .+.+|......    ...+..|..+++.+.+   -.+.+++......++..++
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEECCSSSCCEE
T ss_pred             hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCC---CCEeeeeeEEEcCCCceEE
Confidence            335678999999999987532  2   36777765422    2446678887777743   2455565543222467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +|||++|+.
T Consensus       105 v~e~~~~~~  113 (298)
T 3f66_A          105 VLPYMKHGD  113 (298)
T ss_dssp             EEECCTTCB
T ss_pred             EEeCCCCCC
Confidence            999999975

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.09  E-value=3e-05  Score=70.07  Aligned_cols=78  Identities=13%  Similarity=0.204  Sum_probs=53.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-++.+|.|..+.||+.... ++     ++++|.....    ....+..|...++.+.+   -.+++++.+..  ++.
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~   88 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH---AHIVRLLGLCP--GSS   88 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCC---TTBCCEEEEEC--BSS
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEc--CCc
Confidence            5566788999999999998753 33     2677765421    22445677877776643   35667776554  367


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+.+
T Consensus        89 ~~~v~e~~~~~~L  101 (325)
T 3kex_A           89 LQLVTQYLPLGSL  101 (325)
T ss_dssp             EEEEEECCTTCBS
T ss_pred             cEEEEEeCCCCCH
Confidence            8999999999865

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.09  E-value=1.4e-05  Score=77.83  Aligned_cols=75  Identities=20%  Similarity=0.225  Sum_probs=55.9

Q ss_pred             eeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           55 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      -.+.+|.|....||+....++ .+++|+....  ..+.+..|+++++.|.+   -.+.+++....  ++..++||||++|
T Consensus       271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~--~~~~~lv~e~~~~  345 (535)
T 2h8h_A          271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSK  345 (535)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEECCCTT
T ss_pred             hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEe--eccceEeeehhcC
Confidence            356689999999999987654 7899987643  34567889999998854   34666666543  3678999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus       346 gsL  348 (535)
T 2h8h_A          346 GSL  348 (535)
T ss_dssp             EEH
T ss_pred             CcH
Confidence            753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.08  E-value=1.6e-05  Score=76.39  Aligned_cols=77  Identities=10%  Similarity=-0.033  Sum_probs=54.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC--CccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ..-.+.||.|....||++...  +..+++|+... .....+..|.++++.|.+.  -.+|.+..++.. .+..+++||++
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~--~~i~~i~~~~~~-~~~~~lvme~~   85 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG--TGIPNVRWFGVE-GDYNVLVMDLL   85 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTS--TTCCCEEEEEEE-TTEEEEEEECC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCC--CCCCeEEEEEee-CCEEEEEEECC
Confidence            344566888999999999853  34789998653 2345578899999999764  345555555433 46789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                       |+.
T Consensus        86 -g~s   88 (483)
T 3sv0_A           86 -GPS   88 (483)
T ss_dssp             -CCB
T ss_pred             -CCC
Confidence             543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.08  E-value=3.1e-05  Score=69.81  Aligned_cols=79  Identities=6%  Similarity=-0.069  Sum_probs=52.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccc-------cCC
Q 020294           52 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA-------LPT  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~-------~~~  119 (328)
                      ...-.+.++.|....||++...  +..+++|......   ...+..|...++.+.++  -.+.+++....       ...
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h--~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH--PNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTS--TTBCCEEEEEEECTTTSTTSS
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccC--CChhhccccccccccccccCC
Confidence            3445677899999999999863  3478999764322   34467888888888644  23555554331       112


Q ss_pred             CceEEEEeeecCC
Q 020294          120 GGSYIIMEFIEFG  132 (328)
Q Consensus       120 ~~~~~v~e~l~G~  132 (328)
                      ...+++||+++|.
T Consensus       107 ~~~~lv~e~~~g~  119 (337)
T 3ll6_A          107 AEFLLLTELCKGQ  119 (337)
T ss_dssp             EEEEEEEECCSEE
T ss_pred             ceEEEEEEecCCC
Confidence            4579999999863

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.08  E-value=2.7e-05  Score=70.16  Aligned_cols=78  Identities=19%  Similarity=0.092  Sum_probs=55.0

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~  126 (328)
                      .-.+.+|.|....||++....  ..+++|+...    .....+..|+++++.+..   -.+++++...... ....++||
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A           12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH---KNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC---TTBCCEEEEEECTTTCCEEEEE
T ss_pred             EEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC---CCcceEEEEeecCCCceEEEEE
Confidence            445678889999999998753  3788998753    123456688888888853   3566666654332 24679999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        89 e~~~~~~L   96 (319)
T 4euu_A           89 EFCPCGSL   96 (319)
T ss_dssp             ECCTTCBH
T ss_pred             eCCCCCCH
Confidence            99998753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.08  E-value=2.4e-05  Score=70.97  Aligned_cols=75  Identities=15%  Similarity=0.123  Sum_probs=54.2

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      -.+.+|.|....||++... ++ .+++|+....         ....+..|+.+++.|.+   -.+++++..... .+..+
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~   90 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---PNVITLHEVYEN-KTDVI   90 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEE
Confidence            4567899999999999874 33 7888876421         13457889999988853   346666665443 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +||||++|+.
T Consensus        91 lv~e~~~~~~  100 (326)
T 2y0a_A           91 LILELVAGGE  100 (326)
T ss_dssp             EEEECCCSCB
T ss_pred             EEEEcCCCCC
Confidence            9999999975

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.07  E-value=1.9e-05  Score=72.38  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=55.1

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC--------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS--------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~--------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.+.+|.|....||++... ++ .+++|+...        .....+..|+.+++.|.+   -.+++++..... .+..++
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~l  103 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH---PHIVELLETYSS-DGMLYM  103 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEE
Confidence            3567889999999999764 33 788997631        124567889999988853   346667765443 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       104 v~e~~~g~~L  113 (351)
T 3c0i_A          104 VFEFMDGADL  113 (351)
T ss_dssp             EEECCSSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999999753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.07  E-value=2.5e-05  Score=74.21  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=52.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.+|.|..+.||++... ++ .+.+|+.....     ...+..|+++++.|.+   -.+++++..... .+..++|||+
T Consensus        16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~-~~~~~lv~E~   91 (444)
T 3soa_A           16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH---PNIVRLHDSISE-EGHHYLIFDL   91 (444)
T ss_dssp             EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---cCCCeEEEEEEE-CCEEEEEEEe
Confidence            567899999999998753 34 78888765321     2456789999988853   246666665543 5688999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        92 ~~gg~L   97 (444)
T 3soa_A           92 VTGGEL   97 (444)
T ss_dssp             CBCCBH
T ss_pred             CCCCCH
Confidence            999753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.07  E-value=3.8e-05  Score=67.82  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=54.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c--------cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G--------SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~--------~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      ...-.+.+|.|....||+..... +        .+++|.....   ....+..|+.+++.+.+   -.+++++..... .
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~   84 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH---KHLVLNYGVCVC-G   84 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCC---TTBCCEEEEECC-T
T ss_pred             HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEe-C
Confidence            44556778999999999986532 2        4889987532   23456678887777753   346666666543 4


Q ss_pred             CceEEEEeeecCCCC
Q 020294          120 GGSYIIMEFIEFGSS  134 (328)
Q Consensus       120 ~~~~~v~e~l~G~~~  134 (328)
                      +..++||||++|+.+
T Consensus        85 ~~~~lv~e~~~~~~L   99 (289)
T 4fvq_A           85 DENILVQEFVKFGSL   99 (289)
T ss_dssp             TCCEEEEECCTTCBH
T ss_pred             CCCEEEEECCCCCCH
Confidence            677999999998753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.07  E-value=2e-05  Score=78.96  Aligned_cols=79  Identities=13%  Similarity=0.026  Sum_probs=52.4

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-++.||.|....||++.... + .|.+|+...      .....+..|..++..+.++  -.++.++..... .+..|+
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~l~~~~~~-~~~~~l  419 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYF  419 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCC--TTBCCEEEECBC-SSEEEE
T ss_pred             eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCC--CeEEEEEEEEEe-CCEEEE
Confidence            3446678999999999998643 3 688998642      2234455677666655432  235555554433 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       420 V~E~~~gg~L  429 (674)
T 3pfq_A          420 VMEYVNGGDL  429 (674)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCcCCCcH
Confidence            9999999853

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.06  E-value=1.9e-05  Score=69.83  Aligned_cols=77  Identities=13%  Similarity=0.006  Sum_probs=54.3

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      ..-.+.+|.|..+.||++.... + .+++|+...      .....+..|.++++.+.+   -.+++++..... .+..++
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   91 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH---PNILRMYNYFHD-RKRIYL   91 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC---CCEeeEEEEEEc-CCEEEE
Confidence            3446778889999999998753 3 688898642      123457788888887743   346666665443 467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +|||++|+.
T Consensus        92 v~e~~~~~~  100 (284)
T 2vgo_A           92 MLEFAPRGE  100 (284)
T ss_dssp             EECCCTTEE
T ss_pred             EEEeCCCCc
Confidence            999999874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.06  E-value=1.9e-05  Score=75.07  Aligned_cols=76  Identities=21%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .-.+.+|.|....||+....++ .+++|.....  ....+..|+.+++.|.+   -.+.+++....  .+..++||||++
T Consensus       191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~l~~~~~--~~~~~lv~e~~~  265 (454)
T 1qcf_A          191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH---DKLVKLHAVVT--KEPIYIITEFMA  265 (454)
T ss_dssp             EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEECCCT
T ss_pred             EEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCC---CCEeeEEEEEe--CCccEEEEeecC
Confidence            3356789999999999987654 7889987643  34567789988887743   23455555543  457899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       266 ~g~L  269 (454)
T 1qcf_A          266 KGSL  269 (454)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            9753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.06  E-value=1.3e-05  Score=73.56  Aligned_cols=76  Identities=11%  Similarity=0.094  Sum_probs=50.2

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .-.+.+|.|....||++.... + .+++|+.... ....+..|+++++.|.+   -.+++++..... .+..+++|||++
T Consensus        56 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~~~  131 (349)
T 2w4o_A           56 EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSH---PNIIKLKEIFET-PTEISLVLELVT  131 (349)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECCCC
T ss_pred             EEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCC---CCCcceeeeEec-CCeEEEEEEeCC
Confidence            345678999999999998753 3 6889987642 34557789999888854   346666665443 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus       132 ~~~  134 (349)
T 2w4o_A          132 GGE  134 (349)
T ss_dssp             SCB
T ss_pred             CCC
Confidence            875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.06  E-value=2e-05  Score=75.87  Aligned_cols=78  Identities=23%  Similarity=0.173  Sum_probs=57.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ..-.+.+|.|....||+..... + .+++|.....  ....+..|+.+++.|.+   -.+.+++..... .+..++||||
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~~~~-~~~~~lv~E~  297 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITEF  297 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEEC
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCC---CCEeeEEEEEec-CCcEEEEEEc
Confidence            3445678999999999988753 3 7889987643  34567789999988853   346667766543 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus       298 ~~~g~L  303 (495)
T 1opk_A          298 MTYGNL  303 (495)
T ss_dssp             CTTCBH
T ss_pred             cCCCCH
Confidence            998753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.05  E-value=1.6e-05  Score=70.56  Aligned_cols=78  Identities=9%  Similarity=-0.079  Sum_probs=53.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .-.-.+.+|.|..+.||++...+ + .+++|+....      ....+..|..+++.+.+   -.+++++..... .+..+
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~   91 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH---QHVVGFHGFFED-NDFVF   91 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC---CCEeeeeeeecc-CCEEE
Confidence            34456778999999999998753 3 6788876431      12446678877777643   346666665543 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      ++|||++|+.
T Consensus        92 lv~e~~~~~~  101 (294)
T 2rku_A           92 VVLELCRRRS  101 (294)
T ss_dssp             EEEECCTTCB
T ss_pred             EEEecCCCCC
Confidence            9999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.05  E-value=2.3e-05  Score=72.36  Aligned_cols=75  Identities=16%  Similarity=0.130  Sum_probs=53.9

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -.+.+|.|....||++... ++ .+++|+.....     ...+..|+.+++.|.+   -.+++++..... .+..++|||
T Consensus        33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~lv~e  108 (362)
T 2bdw_A           33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH---PNIVRLHDSIQE-ESFHYLVFD  108 (362)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEEe
Confidence            3567889999999998764 33 78899875321     2446789998888843   346666665443 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus       109 ~~~gg~  114 (362)
T 2bdw_A          109 LVTGGE  114 (362)
T ss_dssp             CCCSCB
T ss_pred             cCCCCC
Confidence            999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.05  E-value=2.5e-05  Score=70.46  Aligned_cols=73  Identities=15%  Similarity=0.120  Sum_probs=43.6

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.+|.|....||++... ++ .+++|.....    ....+.+|+++++.|.+   -.+.+++..... ++..++||||
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e~   84 (317)
T 2pmi_A            9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH---ENIVRLYDVIHT-ENKLTLVFEF   84 (317)
T ss_dssp             ----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCB---TTBCCEEEEECC-TTEEEEEEEC
T ss_pred             EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCC---CCcceEEEEEEE-CCeEEEEEEe
Confidence            4567889999999998764 33 6888876421    23456788888877743   246666665443 4678999999


Q ss_pred             ecC
Q 020294          129 IEF  131 (328)
Q Consensus       129 l~G  131 (328)
                      ++|
T Consensus        85 ~~~   87 (317)
T 2pmi_A           85 MDN   87 (317)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            987

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.05  E-value=1.8e-05  Score=73.11  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      -.+.+|.|..+.||++... +| .+++|+....         ....+..|+.+++.|.+   -.+++++..... .+..+
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~-~~~~~   91 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH---PNIITLHDVYEN-RTDVV   91 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC---cCCCcEEEEEEe-CCEEE
Confidence            3567899999999999864 33 7888876431         12457788888887753   246666665443 46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +||||++|+.
T Consensus        92 lv~e~~~gg~  101 (361)
T 2yab_A           92 LILELVSGGE  101 (361)
T ss_dssp             EEEECCCSCB
T ss_pred             EEEEcCCCCc
Confidence            9999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.05  E-value=3.4e-05  Score=69.59  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=53.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||++... ++ .+++|+....         ....+..|+.+++.+.+   -.+++++..... .+..++
T Consensus        17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~l   92 (321)
T 2a2a_A           17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH---HNVITLHDVYEN-RTDVVL   92 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEE
Confidence            567888999999999864 33 7888976431         13457789998888854   346666665543 467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      +|||++|+.
T Consensus        93 v~e~~~~~~  101 (321)
T 2a2a_A           93 ILELVSGGE  101 (321)
T ss_dssp             EECCCCSCB
T ss_pred             EEEcCCCCc
Confidence            999999875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.05  E-value=8.2e-06  Score=74.32  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=55.4

Q ss_pred             eeeeeeCCcccceeEEEEeCCccEEEEecCCC---Cc-----------------chHHHHHHHHHHHHhcCCCCccccee
Q 020294           54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GP-----------------SMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~-----------------~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      .-++.++.|..+.||++..++..+++|.....   ..                 ..+..|+++++.|.+   -.+++++.
T Consensus        34 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~  110 (348)
T 2pml_X           34 RIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN---EYCLTCEG  110 (348)
T ss_dssp             EEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC---TTBCCCSE
T ss_pred             EEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC---CCcceEEE
Confidence            34667899999999999885558999987521   11                 567788888887743   24556665


Q ss_pred             ccccCCCceEEEEeeecCCCC
Q 020294          114 VGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       114 ~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      .... .+..++||||++|+++
T Consensus       111 ~~~~-~~~~~lv~e~~~~~~L  130 (348)
T 2pml_X          111 IITN-YDEVYIIYEYMENDSI  130 (348)
T ss_dssp             EEES-SSEEEEEEECCTTCBS
T ss_pred             EEee-CCeEEEEEeccCCCcH
Confidence            5443 4688999999999765

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.05  E-value=1.5e-05  Score=71.26  Aligned_cols=79  Identities=14%  Similarity=0.104  Sum_probs=54.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|..+.||++...      + ..+++|+.....    ...+..|+++++.|.+   -.+.+++..... .+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~   99 (314)
T 2ivs_A           24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH---PHVIKLYGACSQ-DG   99 (314)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SS
T ss_pred             heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CceeeEEEEEec-CC
Confidence            4455677899999999999751      2 368889876432    2345678877776632   345666655433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus       100 ~~~lv~e~~~~~~L  113 (314)
T 2ivs_A          100 PLLLIVEYAKYGSL  113 (314)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEeecCCCCH
Confidence            78999999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.05  E-value=3.2e-05  Score=69.70  Aligned_cols=78  Identities=23%  Similarity=0.262  Sum_probs=54.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC-----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCc
Q 020294           53 ITKICPVGGGCINLASRYGTD-----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-----~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~  121 (328)
                      ..-++.+|.|..+.||++...     ++ .+++|+.....    ...+..|+++++.|.+   -.+++++...... ...
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH---EHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEETTTTE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCC---cchhhEEEEEecCCCce
Confidence            356788999999999886531     23 68999886432    2446789988888863   3456666654432 246


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .+++|||++|+.
T Consensus       110 ~~lv~e~~~~~~  121 (318)
T 3lxp_A          110 LQLVMEYVPLGS  121 (318)
T ss_dssp             EEEEECCCTTCB
T ss_pred             EEEEEecccCCc
Confidence            789999999875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.05  E-value=3.4e-05  Score=70.64  Aligned_cols=75  Identities=16%  Similarity=-0.001  Sum_probs=53.9

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      -.+.+|.|..+.||++... ++ .|++|+..... .....|.+++..+.++  -.+++++..... .+..++||||++|+
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-RDPTEEIEILLRYGQH--PNIITLKDVYDD-GKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-CCCHHHHHHHHHHTTS--TTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-CChHHHHHHHHHhcCC--CCcCeEEEEEEc-CCEEEEEEeCCCCC
Confidence            3567899999999999864 33 78999876432 2345788888877554  346666665543 46789999999997


Q ss_pred             C
Q 020294          133 S  133 (328)
Q Consensus       133 ~  133 (328)
                      .
T Consensus       102 ~  102 (342)
T 2qr7_A          102 E  102 (342)
T ss_dssp             B
T ss_pred             c
Confidence            5

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.04  E-value=3.9e-05  Score=68.67  Aligned_cols=76  Identities=13%  Similarity=0.038  Sum_probs=50.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.++.|..+.||++... ++ .+++|.....   .   ...+..|+..++.+.+   -.+++++..... .+..+++
T Consensus        35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv  110 (310)
T 2wqm_A           35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIV  110 (310)
T ss_dssp             EEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCcEEEE
Confidence            34567888999999999863 33 7899987531   1   2345678877777643   346666655433 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      ||+++|+.
T Consensus       111 ~e~~~~~~  118 (310)
T 2wqm_A          111 LELADAGD  118 (310)
T ss_dssp             EECCCSCB
T ss_pred             EecCCCCC
Confidence            99999975

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.04  E-value=3.5e-05  Score=75.58  Aligned_cols=79  Identities=11%  Similarity=0.055  Sum_probs=55.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|..+.||++... ++ .|.+|+...      .....+..|..+|+.+.+   -.+.+++..... .+..+
T Consensus       185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h---p~Iv~l~~~~~~-~~~l~  260 (576)
T 2acx_A          185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS---RFVVSLAYAYET-KDALC  260 (576)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC---CCEeeEEEEEee-CCEEE
Confidence            3455677899999999999874 34 788898642      223456788888888743   245555554433 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       261 lVmEy~~gg~L  271 (576)
T 2acx_A          261 LVLTLMNGGDL  271 (576)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEEcCCCCcH
Confidence            99999999863

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.04  E-value=1e-05  Score=78.97  Aligned_cols=74  Identities=23%  Similarity=0.145  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.++.|....||+.+..+..+++|......           ...+.+|+++++.|.+. .+..|..+...   .+..++
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~~~~~~~~---~~~~~l  416 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF-GIPAPYIFDVD---LDNKRI  416 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGG-TCCCCCEEEEE---TTTTEE
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCC-CcCceEEEEEe---CCccEE
Confidence            4568899999999997666678888754211           12367899999999764 56677777765   356799


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|++
T Consensus       417 VmE~~~ggs  425 (540)
T 3en9_A          417 MMSYINGKL  425 (540)
T ss_dssp             EEECCCSEE
T ss_pred             EEECCCCCC
Confidence            999999875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.03  E-value=2.7e-05  Score=71.25  Aligned_cols=77  Identities=8%  Similarity=-0.031  Sum_probs=54.0

Q ss_pred             eeeeeeCCcccceeEEEEeC----------CccEEEEecCCCCcchHHHHHHHHHHHHhc------------CCCCcccc
Q 020294           54 TKICPVGGGCINLASRYGTD----------AGSFFVKTNRSIGPSMFEGEALGLGAMYET------------RTIRAPRP  111 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~----------~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~------------~~v~VP~~  111 (328)
                      .-.+.+|.|....||++...          ...+++|.....  ..+..|+++++.+.+.            ....+|++
T Consensus        45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~  122 (352)
T 2jii_A           45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC  122 (352)
T ss_dssp             EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred             EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence            34577899999999999764          237999998643  4577888888877431            12346777


Q ss_pred             eeccccCCCceEEEEeeecCCC
Q 020294          112 FKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       112 ~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      +..+...++..++||||+ |+.
T Consensus       123 ~~~~~~~~~~~~lv~e~~-~~~  143 (352)
T 2jii_A          123 MGFGVHQDKYRFLVLPSL-GRS  143 (352)
T ss_dssp             CEEEEETTTEEEEEEECC-CEE
T ss_pred             hhccccCCcEEEEEecCC-CcC
Confidence            776654356889999999 654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.03  E-value=1.2e-05  Score=70.72  Aligned_cols=79  Identities=18%  Similarity=0.149  Sum_probs=53.4

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceecccc-CCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~~~~~~~  124 (328)
                      -.-++.++.|..+.+|++... ++ .+++|......     ...+..|+..++.+.+   -.+++++..... ..+..++
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH---PNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEEGGGTEEEE
T ss_pred             eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC---CCCCeEEEEEecCCCceEEE
Confidence            344677888999999999874 33 78888875321     2446778888888743   245566653211 1357899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+.+
T Consensus        85 v~e~~~~~~L   94 (279)
T 2w5a_A           85 VMEYCEGGDL   94 (279)
T ss_dssp             EEECCTTEEH
T ss_pred             EEeCCCCCCH
Confidence            9999998753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.03  E-value=2.5e-05  Score=69.37  Aligned_cols=79  Identities=20%  Similarity=0.185  Sum_probs=53.7

Q ss_pred             ceeeeeeeCCcccceeEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCc
Q 020294           52 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~  121 (328)
                      ...-++.+|.|....||++..     .++ .+++|......   ...+..|+++++.+.+   -.+++++...... ...
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECHHHHTS
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEecCCCCc
Confidence            455577889999999999973     233 78899876533   2456788888887753   2455555543211 245


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .++||||++|+.
T Consensus        88 ~~lv~e~~~~~~   99 (295)
T 3ugc_A           88 LKLIMEYLPYGS   99 (295)
T ss_dssp             CEEEEECCTTCB
T ss_pred             eEEEEEeCCCCC
Confidence            799999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.03  E-value=2.9e-05  Score=69.85  Aligned_cols=79  Identities=15%  Similarity=0.115  Sum_probs=53.6

Q ss_pred             eeeeeeeCCcccceeEEEEe--CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceecccc----CCC
Q 020294           53 ITKICPVGGGCINLASRYGT--DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTG  120 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~--~~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~  120 (328)
                      -.-++.+|.|....||++..  .++ .+++|+...     .....+..|..+++.|.....-.+++++.....    ..+
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            34567789999999999986  344 577887642     123457789999998874322346666654321    135


Q ss_pred             ceEEEEeeecC
Q 020294          121 GSYIIMEFIEF  131 (328)
Q Consensus       121 ~~~~v~e~l~G  131 (328)
                      ..+++||+++|
T Consensus        93 ~~~lv~e~~~~  103 (326)
T 1blx_A           93 KLTLVFEHVDQ  103 (326)
T ss_dssp             EEEEEEECCSC
T ss_pred             eEEEEEecCCC
Confidence            67999999987

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.03  E-value=2.4e-05  Score=68.92  Aligned_cols=77  Identities=16%  Similarity=0.130  Sum_probs=54.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.-.+.+|.|....||++... ++ .+++|+....  .   ...+..|+.+++.+.+   -.+++++..... .+..+++
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v   83 (284)
T 3kk8_A            8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH---PNIVRLHDSIQE-ESFHYLV   83 (284)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC---CCcCeEEEEEEc-CCEEEEE
Confidence            344667899999999998764 33 7888987532  1   2446678888888853   346666665543 4677999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      ||+++|+.
T Consensus        84 ~e~~~~~~   91 (284)
T 3kk8_A           84 FDLVTGGE   91 (284)
T ss_dssp             ECCCCSCB
T ss_pred             EecCCCCC
Confidence            99999875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.03  E-value=1.1e-05  Score=70.92  Aligned_cols=76  Identities=12%  Similarity=0.013  Sum_probs=52.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.++.|..+.||++... ++ .+++|.....      ....+..|..+++.+.+   -.+++++..... .+..+++
T Consensus        14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   89 (278)
T 3cok_A           14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH---PSILELYNYFED-SNYVYLV   89 (278)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC---CCeEeEEEEEcc-CCeEEEE
Confidence            34567888999999999863 34 7889987421      12456678877776643   346666665443 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |||++|+.
T Consensus        90 ~e~~~~~~   97 (278)
T 3cok_A           90 LEMCHNGE   97 (278)
T ss_dssp             EECCTTEE
T ss_pred             EecCCCCc
Confidence            99999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.03  E-value=3.3e-05  Score=67.99  Aligned_cols=77  Identities=12%  Similarity=0.061  Sum_probs=54.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .-++.++.|....||++... + ..+++|+....         ....+..|+.+++.+.+   -.+++++..... .+..
T Consensus         8 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~   83 (283)
T 3bhy_A            8 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH---PNIITLHDIFEN-KTDV   83 (283)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEE
T ss_pred             hhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC---CCeeehhheecC-CCeE
Confidence            34567888999999999875 3 37888876421         13457889999888853   346666665443 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      +++||+++|+.+
T Consensus        84 ~lv~e~~~~~~L   95 (283)
T 3bhy_A           84 VLILELVSGGEL   95 (283)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEeecCCCcH
Confidence            999999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.02  E-value=2.4e-05  Score=70.22  Aligned_cols=80  Identities=13%  Similarity=0.034  Sum_probs=51.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceecccc---CCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~~  123 (328)
                      .-.-++.+|.|..+.||++... + ..+++|.....   ....+..|+.+++.+.+   -.+++++.....   .....+
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH---PNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEEEEEETTEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCC---CCeeeEEEEEEeccCCCceeE
Confidence            3445677899999999999863 3 37889976432   23456778888877743   245555554321   124679


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++|||++|+.+
T Consensus       107 lv~e~~~~~~L  117 (317)
T 2buj_A          107 LLLPFFKRGTL  117 (317)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEEeCCCCcH
Confidence            99999999753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.02  E-value=7.6e-06  Score=74.13  Aligned_cols=74  Identities=12%  Similarity=0.068  Sum_probs=50.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .-++.+|.|..+.||++... ++ .+++|......    ...+..|+++++.+.+   -.+++++..... .+..++|||
T Consensus         5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e   80 (324)
T 3mtl_A            5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE   80 (324)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCC---TTBCCEEEEEEC-SSCEEEEEE
T ss_pred             EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCC---CCCCeeeeEEee-CCEEEEEec
Confidence            34677899999999999875 33 78889875321    1233467877777643   346666665543 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      |++|
T Consensus        81 ~~~~   84 (324)
T 3mtl_A           81 YLDK   84 (324)
T ss_dssp             CCSE
T ss_pred             cccc
Confidence            9987

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.02  E-value=2.8e-05  Score=71.02  Aligned_cols=77  Identities=16%  Similarity=0.162  Sum_probs=52.5

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-------
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-------  118 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-------  118 (328)
                      -.-++.+|.|..+.||++... ++ .+++|.....     ....+.+|+++++.+.+   -.+++++......       
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH---ENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC---TTBCCEEEEEEEC-------
T ss_pred             eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC---CCcccHhheeeccccccccC
Confidence            344677899999999999873 34 7889976431     13346689998888854   2455666543321       


Q ss_pred             CCceEEEEeeecCC
Q 020294          119 TGGSYIIMEFIEFG  132 (328)
Q Consensus       119 ~~~~~~v~e~l~G~  132 (328)
                      .+..++||||++|.
T Consensus        96 ~~~~~lv~e~~~~~  109 (351)
T 3mi9_A           96 KGSIYLVFDFCEHD  109 (351)
T ss_dssp             -CEEEEEEECCSEE
T ss_pred             CceEEEEEeccCCC
Confidence            24679999999873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.01  E-value=1.8e-05  Score=69.83  Aligned_cols=77  Identities=19%  Similarity=0.146  Sum_probs=52.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC----c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGGCINLASRYGTDA----G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~----~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...-.+.+|.|..+.||+.....    + .+++|......    ...+..|+..++.+.+   -.+++++....  ++..
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~   90 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPV   90 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEC--SSSC
T ss_pred             HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CccceEEEEEc--cCcc
Confidence            44456778999999999987532    1 47888875422    2346677877776642   24666666543  4678


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      ++||||++|+.
T Consensus        91 ~lv~e~~~~~~  101 (281)
T 1mp8_A           91 WIIMELCTLGE  101 (281)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEecCCCCC
Confidence            99999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.01  E-value=4.6e-05  Score=68.83  Aligned_cols=79  Identities=20%  Similarity=0.185  Sum_probs=53.1

Q ss_pred             ceeeeeeeCCcccceeEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCc
Q 020294           52 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~  121 (328)
                      ...-++.+|.|..+.||++..     .++ .+++|......   ...+..|+++++.+.+   -.+++++...... ...
T Consensus        42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCC---TTBCCEEEEECC----C
T ss_pred             HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEecCCCc
Confidence            445577899999999999973     233 78899876432   2456788888887743   2455555543321 236


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .++|||+++|++
T Consensus       119 ~~lv~e~~~~~~  130 (326)
T 2w1i_A          119 LKLIMEYLPYGS  130 (326)
T ss_dssp             CEEEECCCTTCB
T ss_pred             eEEEEECCCCCC
Confidence            799999999975

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.01  E-value=1.2e-05  Score=74.60  Aligned_cols=79  Identities=24%  Similarity=0.121  Sum_probs=53.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGGCINLASRYGTD----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...-.+.+|.|....||+....    ++ .+++|......    ...+..|+.+++.+.+   -.+++++..... .+..
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~  121 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH---PNIIRLEGVVTK-SKPV  121 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSC
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCce
Confidence            3444667899999999998753    23 68999876421    2346678887777743   346667766543 4678


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      ++||||++|+.+
T Consensus       122 ~lv~e~~~~~sL  133 (373)
T 2qol_A          122 MIVTEYMENGSL  133 (373)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEeCCCCCcH
Confidence            999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.01  E-value=3.8e-05  Score=70.87  Aligned_cols=78  Identities=22%  Similarity=0.168  Sum_probs=54.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-++.+|.|..+.||+....      ++ .+++|......    ...+..|+.+++.+.+   -.+++++..... .+
T Consensus        72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~  147 (367)
T 3l9p_A           72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH---QNIVRCIGVSLQ-SL  147 (367)
T ss_dssp             GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CC
Confidence            3445677899999999998842      22 68899875321    2345678888887743   346666766543 45


Q ss_pred             ceEEEEeeecCCC
Q 020294          121 GSYIIMEFIEFGS  133 (328)
Q Consensus       121 ~~~~v~e~l~G~~  133 (328)
                      ..++||||++|+.
T Consensus       148 ~~~lv~e~~~~g~  160 (367)
T 3l9p_A          148 PRFILLELMAGGD  160 (367)
T ss_dssp             SCEEEEECCTTEE
T ss_pred             CCEEEEEeCCCCC
Confidence            7799999999975

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.01  E-value=1.2e-05  Score=72.02  Aligned_cols=80  Identities=18%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             ceeeeeeeCCcccceeEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.+|.|..+.||++..      .+ ..+++|+.....    ...+..|..+++.+.++  -.+++++......++
T Consensus        28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~~~~  105 (316)
T 2xir_A           28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  105 (316)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECCTTS
T ss_pred             heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccC--CCeeeEEEEEecCCC
Confidence            445567789999999999973      22 268899876432    23467889888888553  346667665443245


Q ss_pred             ceEEEEeeecCCC
Q 020294          121 GSYIIMEFIEFGS  133 (328)
Q Consensus       121 ~~~~v~e~l~G~~  133 (328)
                      ..+++|||++|+.
T Consensus       106 ~~~lv~e~~~~~~  118 (316)
T 2xir_A          106 PLMVIVEFCKFGN  118 (316)
T ss_dssp             CCEEEEECCTTEE
T ss_pred             ceEEEEEcCCCCc
Confidence            6899999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.01  E-value=2.4e-05  Score=76.81  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=53.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .+.||.|....||++... +| .|.+|+-...   ....+.+|+.+|+.|.+   -.+-+++..... ++..+++|||++
T Consensus       162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~h---pnIv~l~~~~~~-~~~~~iv~E~~~  237 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH---PTLVNLHDAFED-DNEMVMIYEFMS  237 (573)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCC---TTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEEeecC
Confidence            567899999999998763 34 6778875432   23557789999988853   234455554433 568899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus       238 gg~  240 (573)
T 3uto_A          238 GGE  240 (573)
T ss_dssp             CCB
T ss_pred             CCc
Confidence            985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.01  E-value=1.9e-05  Score=69.34  Aligned_cols=75  Identities=13%  Similarity=0.067  Sum_probs=53.2

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.+.++.|..+.||++...  +..+++|+...      .....+..|...++.+.+   -.+++++..... .+..+++|
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   90 (276)
T 2h6d_A           15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIKLYQVIST-PTDFFMVM   90 (276)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC---CCEeEEEEEEec-CCeEEEEE
Confidence            3567888999999999864  34889998642      123456778888777643   346666665443 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      |+++|+.
T Consensus        91 e~~~~~~   97 (276)
T 2h6d_A           91 EYVSGGE   97 (276)
T ss_dssp             ECCCSCB
T ss_pred             eccCCCc
Confidence            9999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.00  E-value=2.1e-05  Score=72.96  Aligned_cols=78  Identities=12%  Similarity=0.088  Sum_probs=54.4

Q ss_pred             ceeeeeeeCCc--ccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGG--CINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G--~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      .-.-++.+|.|  ....||+.... ++ .+++|+....  .   ...+..|+.+++.+.+   -.+.+++..... .+..
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~  101 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNEL  101 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEE
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC---CCCCcEeEEEEE-CCEE
Confidence            33456678888  88899999875 34 7888987531  1   2456678988888853   245556655443 4678


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      ++||||++|+.
T Consensus       102 ~lv~e~~~~~~  112 (389)
T 3gni_B          102 WVVTSFMAYGS  112 (389)
T ss_dssp             EEEEECCTTCB
T ss_pred             EEEEEccCCCC
Confidence            99999999875

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.00  E-value=1.1e-05  Score=74.01  Aligned_cols=79  Identities=18%  Similarity=0.045  Sum_probs=54.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ...-++.+|.|....||++... ++ .+++|+.....    ...+..|+.+++.+.+   -.+++++..... .+..++|
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv  109 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISIC  109 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCC---CCEEEEeEEEEE-CCEEEEE
Confidence            4556778999999999999875 33 78888875431    2345667776666632   346666665443 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       110 ~e~~~~~~L  118 (360)
T 3eqc_A          110 MEHMDGGSL  118 (360)
T ss_dssp             ECCCTTCBH
T ss_pred             EECCCCCCH
Confidence            999999753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.00  E-value=4.5e-05  Score=69.56  Aligned_cols=75  Identities=12%  Similarity=0.096  Sum_probs=54.0

Q ss_pred             eeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.-++.+|.|..+.||++...++ .+++|.....  .   ...+..|+++++.|.++ .-.+++++.+... .+..+++|
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv~   88 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMVM   88 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhc-CCceEEEeeeEee-CCEEEEEE
Confidence            34467789999999999987655 6888986532  1   24567899999999763 2357777776543 46789999


Q ss_pred             eee
Q 020294          127 EFI  129 (328)
Q Consensus       127 e~l  129 (328)
                      |+.
T Consensus        89 e~~   91 (343)
T 3dbq_A           89 ECG   91 (343)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            953

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.99  E-value=4e-05  Score=67.95  Aligned_cols=76  Identities=13%  Similarity=0.122  Sum_probs=50.9

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ..+.+|.|..+.||+.... ++    .+++|......    ...+..|..+++.+.+   -.+.+++......++..+++
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH---PNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEECCSSSCCEEE
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEecCCCCcEEE
Confidence            3467899999999998742 22    58888876432    2445678887777743   24555665544324556999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      |+++.|+.
T Consensus       102 ~e~~~~~~  109 (298)
T 3pls_A          102 LPYMCHGD  109 (298)
T ss_dssp             ECCCTTCB
T ss_pred             EecccCCC
Confidence            99999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.99  E-value=3.9e-05  Score=67.73  Aligned_cols=79  Identities=15%  Similarity=0.059  Sum_probs=45.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ...-++.+|.|..+.||++... ++ .+++|.......  ...+...+....+.....-.+++++..... .+..+++||
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e   86 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICME   86 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEEE
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEEe
Confidence            4455778899999999999863 34 789998764311  111111111122222212345556655443 467899999


Q ss_pred             eecC
Q 020294          128 FIEF  131 (328)
Q Consensus       128 ~l~G  131 (328)
                      +++|
T Consensus        87 ~~~~   90 (290)
T 3fme_A           87 LMDT   90 (290)
T ss_dssp             CCSE
T ss_pred             hhcc
Confidence            9987

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.99  E-value=1.4e-05  Score=70.89  Aligned_cols=76  Identities=17%  Similarity=0.079  Sum_probs=52.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ...-.+.+|.|..+.||+.... +.+++|+.....     ...+..|+++++.+.+   ..+.+++.+..  .+..+++|
T Consensus        25 ~y~~~~~lG~G~~g~Vy~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~--~~~~~lv~   98 (289)
T 3og7_A           25 QITVGQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH---VNILLFMGYST--APQLAIVT   98 (289)
T ss_dssp             SCEEEEEEEECSSEEEEEEESS-SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEE
T ss_pred             ceeeeeEecCCCCeEEEEEEEc-CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC---CcEEEEEeecc--CCccEEEE
Confidence            4556778999999999998754 468888875321     2446678877776643   34555665443  45789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        99 e~~~~~~  105 (289)
T 3og7_A           99 QWCEGSS  105 (289)
T ss_dssp             ECCCEEE
T ss_pred             EecCCCc
Confidence            9999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.98  E-value=1.9e-05  Score=70.84  Aligned_cols=76  Identities=17%  Similarity=0.111  Sum_probs=52.4

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.++.|....||++... ++ .+++|+....   .   ...+..|+..++.+.+   -.+++++..... ++..+++
T Consensus        37 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv  112 (309)
T 2h34_A           37 RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE---PHVVPIHDFGEI-DGQLYVD  112 (309)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC---CCeeEEEEEEee-CCeEEEE
Confidence            34567888899999999864 33 7889987532   1   2446677777776633   345666665543 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      ||+++|+.
T Consensus       113 ~e~~~~~~  120 (309)
T 2h34_A          113 MRLINGVD  120 (309)
T ss_dssp             EECCCCEE
T ss_pred             EEecCCCC
Confidence            99999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.98  E-value=5.9e-05  Score=68.82  Aligned_cols=75  Identities=11%  Similarity=-0.003  Sum_probs=51.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      .-++.+|.|..+.||++... ++ .+++|.....        ....+..|+++++.+.+   -.+++++..... .+..+
T Consensus        13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~   88 (346)
T 1ua2_A           13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH---PNIIGLLDAFGH-KSNIS   88 (346)
T ss_dssp             CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC---TTBCCEEEEECC-TTCCE
T ss_pred             EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC---CCCCeEEEEEee-CCceE
Confidence            34567888999999999864 23 7889987531        12346689988888853   346666665433 46789


Q ss_pred             EEEeeecCC
Q 020294          124 IIMEFIEFG  132 (328)
Q Consensus       124 ~v~e~l~G~  132 (328)
                      +||||++|.
T Consensus        89 lv~e~~~~~   97 (346)
T 1ua2_A           89 LVFDFMETD   97 (346)
T ss_dssp             EEEECCSEE
T ss_pred             EEEEcCCCC
Confidence            999999873

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=97.97  E-value=2.7e-05  Score=70.58  Aligned_cols=76  Identities=14%  Similarity=0.047  Sum_probs=54.7

Q ss_pred             eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -+.+|.|..+.||++...  +..+++|+....     ....+..|..+++.+..+  -.+++++..... .+..++||||
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~iv~~~~~~~~-~~~~~lv~e~  110 (327)
T 3lm5_A           34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC--PRVINLHEVYEN-TSEIILILEY  110 (327)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEEEEEC
T ss_pred             cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCC--CCEEEEEEEEEe-CCeEEEEEEe
Confidence            367899999999999765  337888976531     134567888888887653  346666665543 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus       111 ~~~~~L  116 (327)
T 3lm5_A          111 AAGGEI  116 (327)
T ss_dssp             CTTEEG
T ss_pred             cCCCcH
Confidence            999754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=97.97  E-value=3.6e-05  Score=70.09  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  119 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~  119 (328)
                      -.-++.+|.|....||++... ++ .+++|+....           ....+..|+.+++.+.+   -.+++++..... .
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~Iv~~~~~~~~-~  101 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH---ANIIKVLDIFEN-Q  101 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC---TTBCCEEEEEEC-S
T ss_pred             eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC---CCEeeEEEEEee-C
Confidence            344677899999999999753 34 7888976532           12356679988888843   346666665443 4


Q ss_pred             CceEEEEeeecCC
Q 020294          120 GGSYIIMEFIEFG  132 (328)
Q Consensus       120 ~~~~~v~e~l~G~  132 (328)
                      +..+++||++.++
T Consensus       102 ~~~~lv~e~~~~g  114 (335)
T 3dls_A          102 GFFQLVMEKHGSG  114 (335)
T ss_dssp             SEEEEEEECCTTS
T ss_pred             CEEEEEEEeCCCC
Confidence            6789999998765

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.97  E-value=2.7e-05  Score=70.78  Aligned_cols=76  Identities=12%  Similarity=0.019  Sum_probs=54.6

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC--------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS--------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~--------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -.+.+|.|..+.||++... ++ .+++|+...        .....+..|+++++.+.+   -.+++++..... .+..++
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~l  105 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH---PNIARLYEVYED-EQYICL  105 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC---CCcceeehhhcc-CCeEEE
Confidence            3567888999999999764 33 688897642        123557789999888853   356677766543 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       106 v~e~~~gg~L  115 (345)
T 3hko_A          106 VMELCHGGHL  115 (345)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=97.97  E-value=2.7e-05  Score=72.29  Aligned_cols=80  Identities=13%  Similarity=0.053  Sum_probs=44.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ...-++.+|.|....||++.... + .|.+|+.....      ...+..|..++  +.....-.+++++..... .+..|
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l--l~~~~hp~Iv~l~~~~~~-~~~~~  115 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQT-ADKLY  115 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC--BCCCCCTTBCCEEEEEEC-SSEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH--HHhCCCCCCCCEEEEEEe-CCEEE
Confidence            34456778999999999998753 3 68889875311      11122232221  111111234555544433 46789


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      +||||++|+.+
T Consensus       116 lv~E~~~gg~L  126 (373)
T 2r5t_A          116 FVLDYINGGEL  126 (373)
T ss_dssp             EEEECCCSCBH
T ss_pred             EEEeCCCCCcH
Confidence            99999999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.97  E-value=2.3e-05  Score=68.75  Aligned_cols=76  Identities=12%  Similarity=0.041  Sum_probs=53.1

Q ss_pred             eeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.+|.|....||++...  +..+++|+....    ....+..|...++.+.+   -.+++++..... .+..+++|||
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   86 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFLEY   86 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCC---CCceeeeeEEEc-CCEEEEEEEe
Confidence            3567888999999999864  347889986421    13456778887777643   346666665543 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        87 ~~~~~L   92 (276)
T 2yex_A           87 CSGGEL   92 (276)
T ss_dssp             CTTEEG
T ss_pred             cCCCcH
Confidence            998754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.97  E-value=2.1e-05  Score=71.87  Aligned_cols=73  Identities=11%  Similarity=-0.039  Sum_probs=51.6

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.+.+|.|..+.||++... + ..+++|+...      .....+.+|+.+++.+.+   -.+++++..... .+..++||
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~-~~~~~lv~   88 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH---PHIIKLYDVITT-PTDIVMVI   88 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEE
Confidence            3567899999999999863 3 3788997642      223467788888877753   246666665543 46789999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      ||+.|
T Consensus        89 E~~~g   93 (336)
T 3h4j_B           89 EYAGG   93 (336)
T ss_dssp             CCCCE
T ss_pred             ECCCC
Confidence            99955

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=97.96  E-value=4e-05  Score=73.86  Aligned_cols=77  Identities=17%  Similarity=0.055  Sum_probs=52.5

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVG  115 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~  115 (328)
                      .-++.+|.|..+.||++.... + .+++|+....                ....+..|+.+++.|.+   -.+++++...
T Consensus        39 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~  115 (504)
T 3q5i_A           39 FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH---PNIIKLFDVF  115 (504)
T ss_dssp             EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC---TTBCCEEEEE
T ss_pred             EEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC---CCCCeEEEEE
Confidence            347789999999999998643 3 6888886421                12346678888887743   3466677665


Q ss_pred             ccCCCceEEEEeeecCCCC
Q 020294          116 ALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus       116 ~~~~~~~~~v~e~l~G~~~  134 (328)
                      .. .+..++||||++|+.+
T Consensus       116 ~~-~~~~~lv~e~~~gg~L  133 (504)
T 3q5i_A          116 ED-KKYFYLVTEFYEGGEL  133 (504)
T ss_dssp             EC-SSEEEEEEECCTTCBH
T ss_pred             Ec-CCEEEEEEecCCCCcH
Confidence            43 4678999999999753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.96  E-value=7.1e-05  Score=67.40  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=53.7

Q ss_pred             eeeeeeeCCcccceeEEEEe--CCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---cccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGT--DAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~--~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~---VP~~~~~~~~~~~~~~~  124 (328)
                      -.-++.+|.|..+.||++..  .++ .+++|+.....  ...+..|.++++.+.......   +++++..... .+..++
T Consensus        16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~~l   94 (339)
T 1z57_A           16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHICI   94 (339)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcEEE
Confidence            34467789999999999875  234 78889876432  345778999999987643333   4555544333 468899


Q ss_pred             EEeeecC
Q 020294          125 IMEFIEF  131 (328)
Q Consensus       125 v~e~l~G  131 (328)
                      +||++.|
T Consensus        95 v~e~~~~  101 (339)
T 1z57_A           95 VFELLGL  101 (339)
T ss_dssp             EEECCCC
T ss_pred             EEcCCCC
Confidence            9999943

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.95  E-value=4.1e-05  Score=68.37  Aligned_cols=76  Identities=16%  Similarity=0.106  Sum_probs=53.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-.+.+|.|..+.||++... + ..+++|.....   ....+..|+.+++.+.+   -.+++++..... .+..+++||+
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   87 (304)
T 2jam_A           12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH---ENIVTLEDIYES-TTHYYLVMQL   87 (304)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             eeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCC---CCeeehhhhccc-CCEEEEEEEc
Confidence            34667888999999999874 3 37889987532   23557789998888853   245566665443 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        88 ~~~~~   92 (304)
T 2jam_A           88 VSGGE   92 (304)
T ss_dssp             CCSCB
T ss_pred             CCCcc
Confidence            99875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.95  E-value=5.8e-05  Score=68.00  Aligned_cols=75  Identities=15%  Similarity=0.004  Sum_probs=51.6

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      -.+.+|.|....||++.... + .+++|+....           ....+..|+++++.|.+   -.+.+++....  .+.
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~   88 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH---PCIIKIKNFFD--AED   88 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC---TTBCCEEEEEE--SSS
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC---CCCceEeeEEc--CCc
Confidence            35678889999999997643 3 7899986431           12346789998888843   24555665543  245


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+.+
T Consensus        89 ~~lv~e~~~~~~L  101 (322)
T 2ycf_A           89 YYIVLELMEGGEL  101 (322)
T ss_dssp             EEEEEECCTTEET
T ss_pred             eEEEEecCCCCcH
Confidence            8999999998754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.95  E-value=4.1e-05  Score=73.60  Aligned_cols=76  Identities=14%  Similarity=0.088  Sum_probs=51.8

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.+|.|..+.||++... ++ .+++|+...     .....+..|+.+++.|.+   -.+++++.+... .+..++|||
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e  116 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH---PNIMKLYDFFED-KRNYYLVME  116 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEEe
Confidence            3677999999999999864 33 788888643     124557788888877743   346666665543 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus       117 ~~~~g~L  123 (494)
T 3lij_A          117 CYKGGEL  123 (494)
T ss_dssp             CCCSCBH
T ss_pred             cCCCCcH
Confidence            9999753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.94  E-value=5.5e-05  Score=72.50  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=55.1

Q ss_pred             eeeeCCcccceeEEEEeC-C-ccEEEEecC-----CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           56 ICPVGGGCINLASRYGTD-A-GSFFVKTNR-----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~-----~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ++.+|.|..+.||++... + ..+++|+..     ......+..|+++++.|.+   -.+++++..... .+..++|||+
T Consensus        27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~  102 (486)
T 3mwu_A           27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH---PNIMKLFEILED-SSSFYIVGEL  102 (486)
T ss_dssp             EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC---CCcCeEEEEEEc-CCEEEEEEEc
Confidence            567899999999999864 3 378899863     2234567789999998853   346666665543 4678999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus       103 ~~~~~L  108 (486)
T 3mwu_A          103 YTGGEL  108 (486)
T ss_dssp             CCSCBH
T ss_pred             CCCCcH
Confidence            999753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.94  E-value=4e-05  Score=67.37  Aligned_cols=78  Identities=17%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc-------------
Q 020294           53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------------  117 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-------------  117 (328)
                      -.-++.++.|..+.||++... + ..+++|..... ...+..|++.++.+.+.   .+.+++.....             
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~~~~~   88 (284)
T 2a19_B           13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-NEKAEREVKALAKLDHV---NIVHYNGCWDGFDYDPETSSKNSS   88 (284)
T ss_dssp             EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-SGGGHHHHHHHHHCCCT---TBCCEEEEEEEEEEC---------
T ss_pred             cceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-cHHHHHHHHHHHhCCCC---CEEEEeeeEeccccCccccccccc
Confidence            345677889999999999875 3 48899987643 35677899999888542   34444432210             


Q ss_pred             -C-CCceEEEEeeecCCCC
Q 020294          118 -P-TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       118 -~-~~~~~~v~e~l~G~~~  134 (328)
                       . .+..+++|||++|+.+
T Consensus        89 ~~~~~~~~lv~e~~~~~~L  107 (284)
T 2a19_B           89 RSKTKCLFIQMEFCDKGTL  107 (284)
T ss_dssp             CCEEEEEEEEECCCCSCBH
T ss_pred             ccCcceEEEEEeccCCCCH
Confidence             0 1346999999999753

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=97.94  E-value=3.5e-05  Score=68.46  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=50.9

Q ss_pred             eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.++.|....||++... + ..+++|.....     ....+..|+..++.+.+   -.+++++..... ++..+++|
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   81 (299)
T 2r3i_A            6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVF   81 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCC---CCeeeEEEEEec-CCceEEEE
Confidence            44667888999999999864 3 37889987532     13456678887777643   346666665443 46789999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      ||++|
T Consensus        82 e~~~~   86 (299)
T 2r3i_A           82 EFLHQ   86 (299)
T ss_dssp             ECCSE
T ss_pred             EcccC
Confidence            99986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.94  E-value=6.7e-05  Score=67.51  Aligned_cols=80  Identities=15%  Similarity=0.089  Sum_probs=49.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c----cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCC--
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G----SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~----~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~--  119 (328)
                      ...-.+.+|.|..+.||++.... +    .+++|+....     ....+..|+++++.|.+   -.+++++.......  
T Consensus        24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH---PHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC---TTBCCCCEEEECC---
T ss_pred             HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC---Cceehhhceeeccccc
Confidence            44556788999999999997543 2    5788987642     12446678877777732   34556665543211  


Q ss_pred             ---CceEEEEeeecCCCC
Q 020294          120 ---GGSYIIMEFIEFGSS  134 (328)
Q Consensus       120 ---~~~~~v~e~l~G~~~  134 (328)
                         ...+++|||++|+.+
T Consensus       101 ~~~~~~~~v~e~~~~~~L  118 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDL  118 (323)
T ss_dssp             ----CEEEEEECCTTCBH
T ss_pred             cCCCccEEEEEeccCCcH
Confidence               134999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.93  E-value=3.3e-05  Score=74.08  Aligned_cols=75  Identities=15%  Similarity=0.119  Sum_probs=53.5

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.+.+|.|..+.||+.... +| .+++|+...      .....+.+|+.+++.+.+   -.+.+++..... .+..++||
T Consensus        20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~l~~~~~~-~~~~~lv~   95 (476)
T 2y94_A           20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH---PHIIKLYQVIST-PSDIFMVM   95 (476)
T ss_dssp             EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEE
Confidence            3677899999999999864 33 789998742      123457788888776643   346666665443 46789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        96 E~~~gg~  102 (476)
T 2y94_A           96 EYVSGGE  102 (476)
T ss_dssp             ECCSSEE
T ss_pred             eCCCCCc
Confidence            9999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.92  E-value=6.5e-05  Score=65.94  Aligned_cols=78  Identities=14%  Similarity=0.065  Sum_probs=52.0

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.++.|....||++...  +..+++|......     ...+..|...+..+.++  -.+++++..... .+..+++|
T Consensus        14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h--~~iv~~~~~~~~-~~~~~lv~   90 (289)
T 1x8b_A           14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH--SHVVRYFSAWAE-DDHMLIQN   90 (289)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC--TTBCCEEEEEEE-TTEEEEEE
T ss_pred             hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC--CCeeeeeeeeec-CCeEEEEE
Confidence            44667888999999999874  3478899875321     23344566666655332  245666665433 46889999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+++
T Consensus        91 e~~~~~~L   98 (289)
T 1x8b_A           91 EYCNGGSL   98 (289)
T ss_dssp             ECCTTCBH
T ss_pred             EecCCCcH
Confidence            99999753

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.92  E-value=5.4e-05  Score=70.58  Aligned_cols=76  Identities=14%  Similarity=0.117  Sum_probs=53.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .-++.+|.|..+.||++... ++ .+++|+.....   ...+..|+.+++.|.+   -.+.+++..... .+..++||||
T Consensus        54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~lv~E~  129 (387)
T 1kob_A           54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH---PKLINLHDAFED-KYEMVLILEF  129 (387)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS---TTBCCEEEEEEC-SSEEEEEEEC
T ss_pred             EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCC---cCCCeEEEEEEe-CCEEEEEEEc
Confidence            34667899999999998764 33 78888875432   2346778888777643   245666665443 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus       130 ~~gg~  134 (387)
T 1kob_A          130 LSGGE  134 (387)
T ss_dssp             CCCCB
T ss_pred             CCCCc
Confidence            99975

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.92  E-value=3e-05  Score=70.11  Aligned_cols=78  Identities=15%  Similarity=0.114  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-c--EEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-S--FFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~--~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.+.+|.|..+.||++... ++ .  +++|....    .....+..|.++++.+.++  -.+++++..... .+..+++
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~~lv  104 (327)
T 1fvr_A           28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLA  104 (327)
T ss_dssp             EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--TTBCCEEEEEEE-TTEEEEE
T ss_pred             cceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC--Cchhhhceeeee-CCceEEE
Confidence            34667899999999998753 33 3  36776543    2345577888888877433  246666665543 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       105 ~e~~~~~~L  113 (327)
T 1fvr_A          105 IEYAPHGNL  113 (327)
T ss_dssp             ECCCTTCBH
T ss_pred             EecCCCCCH
Confidence            999999754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.92  E-value=3.8e-05  Score=71.04  Aligned_cols=48  Identities=15%  Similarity=0.004  Sum_probs=33.8

Q ss_pred             eeeeeCCcccceeEEEEe-C-CccEEEEecCCC------CcchHHHHHHHHHHHHh
Q 020294           55 KICPVGGGCINLASRYGT-D-AGSFFVKTNRSI------GPSMFEGEALGLGAMYE  102 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~-~-~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~  102 (328)
                      -.+.+|.|....||+... . +..+++|+....      ....+..|+.+++.|..
T Consensus        77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~  132 (377)
T 3byv_A           77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  132 (377)
T ss_dssp             EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT
T ss_pred             EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc
Confidence            367889999999999985 3 348899986421      12456788877766653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.92  E-value=3.1e-05  Score=68.53  Aligned_cols=71  Identities=14%  Similarity=0.042  Sum_probs=51.3

Q ss_pred             eeCCcccceeEEEEeC---Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD---AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~---~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|..+.||+....   ++ .+++|+.....    ...+..|+++++.|.+   -.+++++....  .+..+++||++
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~~   91 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA   91 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEec--CCCcEEEEEeC
Confidence            6899999999998642   33 68889886422    2446788888888843   34666666653  45789999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        92 ~~~~   95 (287)
T 1u59_A           92 GGGP   95 (287)
T ss_dssp             TTEE
T ss_pred             CCCC
Confidence            9975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=97.92  E-value=0.00011  Score=69.38  Aligned_cols=77  Identities=12%  Similarity=0.002  Sum_probs=52.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC----CC
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~  120 (328)
                      .-.-.+.+|.|..+.||++.... + .+++|......     ...+.+|+.+|+.|.+   -.+.+++......    .+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS---DYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCTTTCC
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC---CCcceEEEEEecCCCCcCC
Confidence            44456778999999999997643 3 68899875421     2446688888888853   2455566554321    14


Q ss_pred             ceEEEEeeecC
Q 020294          121 GSYIIMEFIEF  131 (328)
Q Consensus       121 ~~~~v~e~l~G  131 (328)
                      ..++|||+++|
T Consensus       104 ~~~lv~e~~~~  114 (432)
T 3n9x_A          104 ELYIVLEIADS  114 (432)
T ss_dssp             CEEEEEECCSE
T ss_pred             eEEEEEecCCc
Confidence            67999999876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=97.92  E-value=4e-05  Score=71.71  Aligned_cols=73  Identities=15%  Similarity=-0.018  Sum_probs=50.3

Q ss_pred             eeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--C-CCceEEEEeeecC
Q 020294           57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEFIEF  131 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~-~~~~~~v~e~l~G  131 (328)
                      +.+|.|..+.||++... ++ .+++|+...  ...+..|++.+..+.++  -.+.+++.....  . .+..++||||++|
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~E~~~~~~~~~h--p~iv~l~~~~~~~~~~~~~~~lv~E~~~g  143 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDG  143 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc--chhHHHHHHHHHHhcCC--CCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence            46899999999999864 33 789998753  34567888877665443  345666654321  1 2457999999999


Q ss_pred             CC
Q 020294          132 GS  133 (328)
Q Consensus       132 ~~  133 (328)
                      +.
T Consensus       144 g~  145 (400)
T 1nxk_A          144 GE  145 (400)
T ss_dssp             EE
T ss_pred             Cc
Confidence            75

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.91  E-value=5e-05  Score=71.73  Aligned_cols=77  Identities=9%  Similarity=0.016  Sum_probs=53.6

Q ss_pred             eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---cccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~---VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.+|.|....||++.... + .+++|+.....  ...+..|.++++.|.......   +.+++..... .+..+++|
T Consensus       100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~  178 (429)
T 3kvw_A          100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHICMTF  178 (429)
T ss_dssp             EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEEEEE
T ss_pred             EEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEEEEE
Confidence            346778999999999997643 3 78899886532  244667999999998653333   4444443332 46789999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      |+++|
T Consensus       179 e~~~~  183 (429)
T 3kvw_A          179 ELLSM  183 (429)
T ss_dssp             CCCCC
T ss_pred             eccCC
Confidence            99976

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.91  E-value=5e-05  Score=70.79  Aligned_cols=77  Identities=19%  Similarity=0.102  Sum_probs=54.4

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~  126 (328)
                      .-.+.+|.|....||++....  ..+++|+...    .....+..|+++++.+.+   -.+++++...... ....++||
T Consensus        12 ~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A           12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH---KNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC---TTBCCEEEEEECTTTCCEEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC---CCCCeEEEeeccCCCCeeEEEE
Confidence            345668889999999998753  3788998753    123456688988888853   3466666654432 23679999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus        89 e~~~~g~   95 (396)
T 4eut_A           89 EFCPCGS   95 (396)
T ss_dssp             CCCTTEE
T ss_pred             ecCCCCC
Confidence            9999875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=97.91  E-value=9e-05  Score=68.61  Aligned_cols=77  Identities=10%  Similarity=-0.004  Sum_probs=52.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---cccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~---VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-.+.+|.|....||+.... ++ .+++|+.....  ...+..|..+++.+.....+.   +.+++..... .+..++||
T Consensus        57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~  135 (382)
T 2vx3_A           57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVF  135 (382)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEEEE
T ss_pred             EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEEEE
Confidence            34667899999999999764 33 68899876432  244567888888887653222   4444443332 46789999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      |+++|
T Consensus       136 e~~~~  140 (382)
T 2vx3_A          136 EMLSY  140 (382)
T ss_dssp             ECCCC
T ss_pred             ecCCC
Confidence            99977

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=97.90  E-value=2.8e-05  Score=69.09  Aligned_cols=78  Identities=9%  Similarity=0.030  Sum_probs=41.8

Q ss_pred             eeeeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ..-.+.+|.|..+.||++...  +..+++|.....    ....+..|+..++.+.+   -.+++++..... .+..+++|
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   92 (303)
T 2vwi_A           17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH---PNIVSYYTSFVV-KDELWLVM   92 (303)
T ss_dssp             CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCC---TTBCCEEEEEES-SSCEEEEE
T ss_pred             hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCC---CCEeeEEEEEee-cCCcEEEe
Confidence            344677899999999999753  347899987532    12334456655544422   235555554433 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        93 e~~~~~~L  100 (303)
T 2vwi_A           93 KLLSGGSV  100 (303)
T ss_dssp             ECCTTCBH
T ss_pred             hhccCCch
Confidence            99999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.90  E-value=9.9e-05  Score=66.27  Aligned_cols=76  Identities=16%  Similarity=0.065  Sum_probs=46.7

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--c---chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--P---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ...++.+|.|....||++... ++ .+++|......  .   .....|...+..+..+  -.+++++..... .+..+++
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h--~~iv~l~~~~~~-~~~~~lv  135 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH--PCCVRLEQAWEE-GGILYLQ  135 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEEEE-TTEEEEE
T ss_pred             eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCC--CcEEEEEEEEEe-CCEEEEE
Confidence            445677999999999999875 34 78899865321  1   1122333333333222  346666665443 4678999


Q ss_pred             EeeecC
Q 020294          126 MEFIEF  131 (328)
Q Consensus       126 ~e~l~G  131 (328)
                      ||++.|
T Consensus       136 ~e~~~~  141 (311)
T 3p1a_A          136 TELCGP  141 (311)
T ss_dssp             EECCCC
T ss_pred             EeccCC
Confidence            999955

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.90  E-value=6.8e-05  Score=67.12  Aligned_cols=80  Identities=18%  Similarity=0.116  Sum_probs=49.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC--c---cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC---
Q 020294           52 HITKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---  118 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---  118 (328)
                      ...-.+.+|.|....||+.....  +   .+++|......     ...+..|+..++.+.+   -.+.+++......   
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH---PNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC---TTBCCCCEEEEC----
T ss_pred             HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC---CCeeeeeEEEeecccc
Confidence            45556778999999999986532  2   68999876321     2346677877777743   2355555543321   


Q ss_pred             -CCceEEEEeeecCCCC
Q 020294          119 -TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 -~~~~~~v~e~l~G~~~  134 (328)
                       ....+++|||++|+.+
T Consensus       112 ~~~~~~~v~e~~~~~~L  128 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDL  128 (313)
T ss_dssp             ---CEEEEEECCTTCBH
T ss_pred             CCcccEEEEecccCCCH
Confidence             1256999999999753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=97.90  E-value=0.00015  Score=66.64  Aligned_cols=77  Identities=13%  Similarity=0.066  Sum_probs=52.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC----CCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~  121 (328)
                      .-.-++.+|.|..+.||++... ++ .+++|......    ...+..|+++++.+.+   -.+++++......    ...
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH---ENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC---TTBCCCCEEECCSSTTTCCC
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCC---CCCccceeEEecCCccccce
Confidence            4455778899999999999764 33 78899876422    2446678888888853   2344555443221    246


Q ss_pred             eEEEEeeecC
Q 020294          122 SYIIMEFIEF  131 (328)
Q Consensus       122 ~~~v~e~l~G  131 (328)
                      .+++||+++|
T Consensus       105 ~~iv~e~~~~  114 (364)
T 3qyz_A          105 VYIVQDLMET  114 (364)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEcccCc
Confidence            7999999987

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.89  E-value=6.6e-05  Score=66.30  Aligned_cols=78  Identities=18%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             ceeeeeeeCCcccceeEEEEe--CCc---cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGT--DAG---SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~--~~~---~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-++.++.|..+.||+...  .++   .+++|+....   .   ...+..|++.++.+.+   -.+++++.....  +
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~   93 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH---RNLIRLYGVVLT--P   93 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS--S
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEcc--C
Confidence            445567789999999999874  233   4788887532   1   2446678888887742   346666665543  4


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++||+++|+.+
T Consensus        94 ~~~~v~e~~~~~~L  107 (291)
T 1u46_A           94 PMKMVTELAPLGSL  107 (291)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             CceeeEecccCCCH
Confidence            58999999998753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=97.89  E-value=7.5e-05  Score=67.55  Aligned_cols=78  Identities=18%  Similarity=0.172  Sum_probs=53.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-++.+|.|..+.||+.... ++     ++++|....    .....+..|+.+++.+.+   -.+++++....  .+.
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~--~~~   90 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   90 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCB---TTBCCEEEEEE--SSS
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEe--cCC
Confidence            4556778999999999998753 33     357777643    123457789988888854   34667776654  356


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++++++++++.+
T Consensus        91 ~~~v~e~~~~g~L  103 (327)
T 3poz_A           91 VQLITQLMPFGCL  103 (327)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             eEEEEEecCCCcH
Confidence            7899999999753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.89  E-value=7.3e-05  Score=68.41  Aligned_cols=78  Identities=18%  Similarity=0.019  Sum_probs=52.6

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCC---CcccceeccccCCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTI---RAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v---~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.-++.+|.|..+.||++... ++ .+++|+.....  ......|..+++.+... .+   .+.+++..... .+..++|
T Consensus        37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~h~~iv~~~~~~~~-~~~~~lv  114 (360)
T 3llt_A           37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQND-DINNNNIVKYHGKFMY-YDHMCLI  114 (360)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCC-STTGGGBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhccc-CCCCCCeecccceeeE-CCeeEEE
Confidence            345678899999999999873 33 78899876421  34456788888888743 23   34444443332 4678999


Q ss_pred             EeeecCCC
Q 020294          126 MEFIEFGS  133 (328)
Q Consensus       126 ~e~l~G~~  133 (328)
                      ||++ |+.
T Consensus       115 ~e~~-~~~  121 (360)
T 3llt_A          115 FEPL-GPS  121 (360)
T ss_dssp             ECCC-CCB
T ss_pred             EcCC-CCC
Confidence            9999 543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=97.88  E-value=7.7e-05  Score=67.33  Aligned_cols=78  Identities=23%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-++.+|.|....||+....      + ..+++|......    ...+..|+.+++.+.+   -.+++++..... .+
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~  106 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH---QNIVRCIGVSLQ-SL  106 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCC---CCCCeEEEEEcC-CC
Confidence            4455677899999999998732      2 268999875321    2345678888887732   346666666543 45


Q ss_pred             ceEEEEeeecCCC
Q 020294          121 GSYIIMEFIEFGS  133 (328)
Q Consensus       121 ~~~~v~e~l~G~~  133 (328)
                      ..+++|||++|+.
T Consensus       107 ~~~lv~e~~~~~~  119 (327)
T 2yfx_A          107 PRFILMELMAGGD  119 (327)
T ss_dssp             SCEEEEECCTTEE
T ss_pred             CcEEEEecCCCCc
Confidence            7799999999875

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=97.88  E-value=0.00014  Score=65.98  Aligned_cols=78  Identities=14%  Similarity=0.034  Sum_probs=53.0

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc--cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCC---cccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG--SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~--~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~---VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|..+.||++... ++  .+++|+....  ....+..|+.+++.|.+.....   +..++..... .+..+++
T Consensus        22 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~lv  100 (355)
T 2eu9_A           22 EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHMCIA  100 (355)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeEEEE
Confidence            44677899999999998763 23  6889988643  2355778999999997643222   3333333222 4678999


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      ||++.|.
T Consensus       101 ~e~~~~~  107 (355)
T 2eu9_A          101 FELLGKN  107 (355)
T ss_dssp             EECCCCB
T ss_pred             EeccCCC
Confidence            9999654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.88  E-value=6.2e-05  Score=67.52  Aligned_cols=78  Identities=19%  Similarity=0.101  Sum_probs=48.0

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCCcccceeccccC---CCce
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~  122 (328)
                      .-.+.+|.|....||++... ++ .+++|+.....   .   ..+..|+..++.+.+   -.+++++......   ....
T Consensus        15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH---PAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCC---TTBCCEEEEEEEEETTEEEE
T ss_pred             EEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCC---CCcceEEEeeeccCCCCccc
Confidence            34667889999999999853 33 78999886421   1   234455554444422   2355565543321   1234


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      ++||||++|+.+
T Consensus        92 ~lv~e~~~g~~L  103 (311)
T 3ork_A           92 YIVMEYVDGVTL  103 (311)
T ss_dssp             EEEEECCCEEEH
T ss_pred             EEEEecCCCCCH
Confidence            999999998753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.88  E-value=9.1e-05  Score=66.00  Aligned_cols=74  Identities=15%  Similarity=-0.035  Sum_probs=50.8

Q ss_pred             eeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc---CCCceEEEEeeecC
Q 020294           57 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSYIIMEFIEF  131 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~~~v~e~l~G  131 (328)
                      +.+|.|..+.||++... + ..+++|+...  ......|.+.+..+.++  -.+++++.....   ..+..+++|||++|
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~e~~~~~~~~~h--~~i~~~~~~~~~~~~~~~~~~lv~e~~~~   99 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDG   99 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc--cHHHHHHHHHHHHhccC--CCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence            55888999999999863 3 3789998754  34567788877655543  345556554321   12467999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus       100 ~~L  102 (299)
T 3m2w_A          100 GEL  102 (299)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.87  E-value=5.4e-05  Score=67.09  Aligned_cols=71  Identities=15%  Similarity=0.140  Sum_probs=49.4

Q ss_pred             eeCCcccceeEEEEe--C-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGT--D-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~--~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+|.|..+.||+...  . . ..+++|+.....     ...+..|+++++.+.+   -.+++++....  .+..+++||+
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~   98 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVMEM   98 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC---TTBCCEEEEEE--SSSEEEEEEC
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEC--CCCcEEEEEe
Confidence            688899999999843  2 2 368899876421     2446778888887743   34666666553  4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        99 ~~~~~  103 (291)
T 1xbb_A           99 AELGP  103 (291)
T ss_dssp             CTTEE
T ss_pred             CCCCC
Confidence            99875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=97.87  E-value=0.00011  Score=68.20  Aligned_cols=75  Identities=13%  Similarity=0.113  Sum_probs=43.9

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~  126 (328)
                      -++.+|.|..+.||++... ++ .+++|.....  .   ...+..|..+++.+..+  -.+++++...... ....++||
T Consensus        13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~l~~~~~~~~~~~~~lv~   90 (388)
T 3oz6_A           13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH--ENIVNLLNVLRADNDRDVYLVF   90 (388)
T ss_dssp             EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTC--TTBCCEEEEEECTTSSCEEEEE
T ss_pred             EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCC--CCCCeeeeEEecCCCCEEEEEe
Confidence            3567899999999998753 33 7888976431  1   23355788888888643  3466666654322 24679999


Q ss_pred             eeecC
Q 020294          127 EFIEF  131 (328)
Q Consensus       127 e~l~G  131 (328)
                      ||++|
T Consensus        91 e~~~~   95 (388)
T 3oz6_A           91 DYMET   95 (388)
T ss_dssp             ECCSE
T ss_pred             cccCc
Confidence            99986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.87  E-value=5.1e-05  Score=72.62  Aligned_cols=76  Identities=13%  Similarity=0.013  Sum_probs=54.7

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      -.+.+|.|..+.||++... + ..+++|+...      .....+..|+.+++.|.+   -.+++++.+... .+..++||
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~  105 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH---PNIMKLYEFFED-KGYFYLVG  105 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEEEE
Confidence            3667899999999999864 3 3789998642      123457788888887743   346667766543 46889999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      |+++|+.+
T Consensus       106 e~~~~~~L  113 (484)
T 3nyv_A          106 EVYTGGEL  113 (484)
T ss_dssp             CCCCSCBH
T ss_pred             ecCCCCCH
Confidence            99999753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.85  E-value=2.5e-05  Score=69.19  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=49.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceecccc------------
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL------------  117 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~------------  117 (328)
                      .-++.+|.|..+.||++... ++ .+++|.....  ....+..|+.+++.+.+   -.+.+++.....            
T Consensus         9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH---QYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEECCCCCC------
T ss_pred             hhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCc---hHHHHHHHHHHhhcchhhhhcccc
Confidence            34567888999999999864 34 7888987532  12446678877776643   234444432211            


Q ss_pred             CCCceEEEEeeecCCC
Q 020294          118 PTGGSYIIMEFIEFGS  133 (328)
Q Consensus       118 ~~~~~~~v~e~l~G~~  133 (328)
                      ..+..+++|||++|+.
T Consensus        86 ~~~~~~lv~e~~~~~~  101 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGT  101 (303)
T ss_dssp             CEEEEEEEEECCCSCB
T ss_pred             cCCceEEEEecCCCCC
Confidence            0246799999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=97.84  E-value=9.8e-05  Score=68.04  Aligned_cols=49  Identities=8%  Similarity=-0.031  Sum_probs=35.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHh
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYE  102 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~  102 (328)
                      .-.+.+|.|....||++... ++ .+++|+.....      ...+..|+.+++.|..
T Consensus        65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  121 (371)
T 3q60_A           65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG  121 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc
Confidence            34667899999999999864 34 78999876421      2446678887888864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.84  E-value=0.00015  Score=67.50  Aligned_cols=73  Identities=12%  Similarity=0.118  Sum_probs=51.8

Q ss_pred             eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .-++.+|.|....||++...++ .+++|+.....     ...+..|+++++.|... .-.+.+++.+... ++..++|||
T Consensus        59 ~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv~E  136 (390)
T 2zmd_A           59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMVME  136 (390)
T ss_dssp             EEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccC-CCeEEEEEEEEec-CCEEEEEEe
Confidence            3456789999999999987655 68889864321     24577899999999752 2346667765543 457899999


Q ss_pred             e
Q 020294          128 F  128 (328)
Q Consensus       128 ~  128 (328)
                      +
T Consensus       137 ~  137 (390)
T 2zmd_A          137 C  137 (390)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.84  E-value=0.00014  Score=66.18  Aligned_cols=77  Identities=14%  Similarity=0.097  Sum_probs=52.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC----CCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~  121 (328)
                      ...-.+.+|.|..+.||+.... ++ .+++|......    ...+..|+.+++.+.+   -.+++++......    .+.
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH---ENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCSTTCCC
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcC---CCcCCeeeeecccccCccce
Confidence            3445677889999999999865 34 78899875422    2335578888888753   3466666554321    257


Q ss_pred             eEEEEeeecC
Q 020294          122 SYIIMEFIEF  131 (328)
Q Consensus       122 ~~~v~e~l~G  131 (328)
                      .+++||+++|
T Consensus        89 ~~lv~e~~~~   98 (353)
T 2b9h_A           89 VYIIQELMQT   98 (353)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEeccCc
Confidence            8999999986

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.83  E-value=0.00012  Score=68.43  Aligned_cols=72  Identities=13%  Similarity=0.042  Sum_probs=45.7

Q ss_pred             eeCCcccceeEEEEeC----CccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeecC
Q 020294           58 PVGGGCINLASRYGTD----AGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEF  131 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~----~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G  131 (328)
                      .+|.|..+.||++...    +..+++|..... ....+.+|+.+|+.|.+   -.+.+++...... ....++||||++|
T Consensus        28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH---PNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             CCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCC---TTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             EeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCC---CCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            5889999999999853    237899987643 24457789999998864   2344555443211 4578999999887


Q ss_pred             C
Q 020294          132 G  132 (328)
Q Consensus       132 ~  132 (328)
                      .
T Consensus       105 ~  105 (405)
T 3rgf_A          105 D  105 (405)
T ss_dssp             E
T ss_pred             C
Confidence            3

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.83  E-value=2.4e-05  Score=72.59  Aligned_cols=76  Identities=14%  Similarity=0.182  Sum_probs=48.4

Q ss_pred             eeeeCCcccceeEEEEe--CCc---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           56 ICPVGGGCINLASRYGT--DAG---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~--~~~---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .+.+|.|....||+...  .++   .+.+|..... .   ...+..|+.+++.+.+   -.+.+++......++..++||
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCC---TTBCCCCEEECCCSSCCEEEE
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEEcCCCCeEEEE
Confidence            46789999999999764  232   4677776532 1   2345567766666632   235555554332246789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus       171 e~~~~g~L  178 (373)
T 3c1x_A          171 PYMKHGDL  178 (373)
T ss_dssp             ECCTTCBH
T ss_pred             ECCCCCCH
Confidence            99999753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=97.83  E-value=7.6e-05  Score=68.60  Aligned_cols=78  Identities=14%  Similarity=0.099  Sum_probs=49.4

Q ss_pred             eeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCCcchHHHHHHHHHHHHh------------cCCCCcccceec
Q 020294           54 TKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIGPSMFEGEALGLGAMYE------------TRTIRAPRPFKV  114 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~~~~~~~E~~~l~~L~~------------~~~v~VP~~~~~  114 (328)
                      .-.+.+|.|..+.||+.....       ..+++|+..... ..+..|.+.++.+..            .....+++++..
T Consensus        38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~  116 (364)
T 3op5_A           38 KVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN-GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS  116 (364)
T ss_dssp             EEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC-HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred             EEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc-hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence            346778999999999997643       368999876532 345567776665543            112346666665


Q ss_pred             cccC---CCceEEEEeeecCCC
Q 020294          115 GALP---TGGSYIIMEFIEFGS  133 (328)
Q Consensus       115 ~~~~---~~~~~~v~e~l~G~~  133 (328)
                      ....   ....+++|||+ |+.
T Consensus       117 ~~~~~~~~~~~~lv~e~~-g~~  137 (364)
T 3op5_A          117 GLHDKNGKSYRFMIMDRF-GSD  137 (364)
T ss_dssp             EEEEETTEEEEEEEEECE-EEE
T ss_pred             eeeccCCcceEEEEEeCC-CCC
Confidence            4321   13479999999 654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=97.83  E-value=8.1e-05  Score=65.80  Aligned_cols=77  Identities=17%  Similarity=0.163  Sum_probs=54.1

Q ss_pred             eeeeeeCCcccceeEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      .-++.++.|....||++...  +..+++|+...     .....+..|++.++.+..   -.+++++..... .+..+++|
T Consensus        25 ~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~  100 (287)
T 2wei_A           25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH---PNIMKLFEILED-SSSFYIVG  100 (287)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             eeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC---CCccEEEEEEeC-CCeEEEEE
Confidence            34567888999999999874  34789998642     123456788888887743   346666665443 46789999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      |+++|+.+
T Consensus       101 e~~~~~~L  108 (287)
T 2wei_A          101 ELYTGGEL  108 (287)
T ss_dssp             CCCCSCBH
T ss_pred             EccCCCCH
Confidence            99998753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=97.82  E-value=6.2e-05  Score=66.99  Aligned_cols=74  Identities=16%  Similarity=0.054  Sum_probs=49.4

Q ss_pred             eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294           56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v  125 (328)
                      .+.+|.|..+.||++.... + .+++|+....       ....+..|+..++.+.+   -.+.+++...... .+..+++
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~lv   86 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH---KNVIQLVDVLYNEEKQKMYMV   86 (305)
T ss_dssp             CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEECC---CEEEE
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC---CCeeEEEEEEEcCCCCeEEEE
Confidence            4567888999999998643 3 7889987531       23456778888777743   2455666543221 3578999


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      |||++|+
T Consensus        87 ~e~~~~~   93 (305)
T 2wtk_C           87 MEYCVCG   93 (305)
T ss_dssp             EECCSEE
T ss_pred             ehhccCC
Confidence            9999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.82  E-value=6e-05  Score=66.70  Aligned_cols=77  Identities=12%  Similarity=0.007  Sum_probs=49.1

Q ss_pred             eeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc--C-CCceEE
Q 020294           55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~-~~~~~~  124 (328)
                      -.+.+|.|....||++.... + .+.+|.....     ....+..|+.+++.+.+   -.+++++.....  . ....++
T Consensus        30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEESSSCEEEEE
T ss_pred             eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC---CCeeeeeeeeccccCCCceEEE
Confidence            34468999999999997643 3 5667776421     12446678877776643   245555554221  1 245799


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus       107 v~e~~~~~~L  116 (290)
T 1t4h_A          107 VTELMTSGTL  116 (290)
T ss_dssp             EEECCCSCBH
T ss_pred             EEEecCCCCH
Confidence            9999999753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=97.81  E-value=7.6e-05  Score=67.63  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=51.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ...-++.+|.|....||++... ++     ++++|.....    ....+..|+.+++.+.+   -.+++++....  .+.
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~--~~~   90 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   90 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCB---TTBCCCCEEEE--SSS
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEe--cCC
Confidence            4556778999999999999753 33     3467765431    23456778888777743   24555665544  346


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .++++++++|+.
T Consensus        91 ~~~v~~~~~~g~  102 (327)
T 3lzb_A           91 VQLITQLMPFGC  102 (327)
T ss_dssp             EEEEECCCSSCB
T ss_pred             ceEEEEecCCCc
Confidence            889999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.79  E-value=0.0001  Score=66.40  Aligned_cols=78  Identities=12%  Similarity=-0.103  Sum_probs=55.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .-.-.+.+|.|....||+.... ++ .+++|.....         ....+..|..+++.+... .-.+++++..... .+
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~i~~~~~~~~~-~~  121 (320)
T 3a99_A           44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG-FSGVIRLLDWFER-PD  121 (320)
T ss_dssp             TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS-SCSBCCEEEEEEC-SS
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccC-CCCceEEEEEEec-CC
Confidence            4555678899999999999753 33 7899986421         124566899999998641 2356667766543 46


Q ss_pred             ceEEEEeeecC
Q 020294          121 GSYIIMEFIEF  131 (328)
Q Consensus       121 ~~~~v~e~l~G  131 (328)
                      ..+++||+..+
T Consensus       122 ~~~lv~e~~~~  132 (320)
T 3a99_A          122 SFVLILERPEP  132 (320)
T ss_dssp             EEEEEEECCSS
T ss_pred             cEEEEEEcCCC
Confidence            78999999876

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.77  E-value=8.1e-05  Score=71.05  Aligned_cols=74  Identities=12%  Similarity=0.116  Sum_probs=49.3

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~  123 (328)
                      ++.+|.|..+.||++... ++ .+++|.....     ....+.+|+.+++.+.+   -.+.+++......     ....+
T Consensus        67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~~~~~~~~~~~~  143 (464)
T 3ttj_A           67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH---KNIISLLNVFTPQKTLEEFQDVY  143 (464)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCCSTTTCCEEE
T ss_pred             EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC---CCCCcEEEEEccCCccccCCeEE
Confidence            677899999999998754 33 7888987532     12345678888887743   2345555443221     23569


Q ss_pred             EEEeeecCC
Q 020294          124 IIMEFIEFG  132 (328)
Q Consensus       124 ~v~e~l~G~  132 (328)
                      +||||++|.
T Consensus       144 lv~E~~~~~  152 (464)
T 3ttj_A          144 LVMELMDAN  152 (464)
T ss_dssp             EEEECCSEE
T ss_pred             EEEeCCCCC
Confidence            999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.77  E-value=0.00015  Score=66.93  Aligned_cols=77  Identities=17%  Similarity=0.077  Sum_probs=50.3

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCC-----C
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT-----G  120 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~-----~  120 (328)
                      -.-.+.+|.|..+.||++... ++ .+++|......     ...+..|+.+++.+.+   -.+++++.......     .
T Consensus        44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH---ENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSSTTCC
T ss_pred             EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC---CCchhhhhheeccCCcccce
Confidence            344677899999999999764 34 78899876421     2345678888887753   23555555433211     1


Q ss_pred             ceEEEEeeecCC
Q 020294          121 GSYIIMEFIEFG  132 (328)
Q Consensus       121 ~~~~v~e~l~G~  132 (328)
                      ..+++||+++|.
T Consensus       121 ~~~lv~e~~~~~  132 (371)
T 4exu_A          121 DFYLVMPFMQTD  132 (371)
T ss_dssp             CCEEEEECCCEE
T ss_pred             eEEEEEcccccc
Confidence            239999999863

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=97.76  E-value=5.6e-05  Score=71.62  Aligned_cols=77  Identities=12%  Similarity=-0.042  Sum_probs=44.8

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.+|.|..+.||++... ++ .+.+|+...      .....+..|..+++.+.+   -.+++++..... .+..++|
T Consensus       151 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~l~~~~~~-~~~~~lv  226 (446)
T 4ejn_A          151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFV  226 (446)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC---TTSCCEEEEEEE-TTEEEEE
T ss_pred             EEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC---CeEeeEEEEEee-CCEEEEE
Confidence            34667899999999998764 34 788897642      112234455555554432   235555554433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       227 ~e~~~~~~L  235 (446)
T 4ejn_A          227 MEYANGGEL  235 (446)
T ss_dssp             ECCCSSCBH
T ss_pred             EeeCCCCcH
Confidence            999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=97.76  E-value=0.00012  Score=69.37  Aligned_cols=76  Identities=9%  Similarity=0.023  Sum_probs=44.0

Q ss_pred             eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC----CCc
Q 020294           53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~  121 (328)
                      -.-++.+|.|....||++... + ..+++|.....  .   ...+.+|+.+|+.|.+   -.+.+++......    ...
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH---DHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCTTTCCC
T ss_pred             eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC---CCCCceEEEEecCCcccCce
Confidence            344667899999999999754 3 37888876432  1   2446689999888843   3455666543221    246


Q ss_pred             eEEEEeeecC
Q 020294          122 SYIIMEFIEF  131 (328)
Q Consensus       122 ~~~v~e~l~G  131 (328)
                      .|+|||+++|
T Consensus       132 ~~lv~e~~~~  141 (458)
T 3rp9_A          132 LYVVLEIADS  141 (458)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEecccc
Confidence            7999998765

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=97.74  E-value=9.6e-05  Score=66.92  Aligned_cols=75  Identities=16%  Similarity=0.050  Sum_probs=50.8

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.-++.+|.|....||++... ++ .+++|+.....     ...+..|+.+++.+.+   -.+.+++..... .+..++|
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv  111 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH---RNIIELKSVIHH-NHRLHLI  111 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC---CCcceEEEEEec-CCEEEEE
Confidence            344677899999999999754 33 78899875321     2345678888777743   245566655443 4678999


Q ss_pred             EeeecC
Q 020294          126 MEFIEF  131 (328)
Q Consensus       126 ~e~l~G  131 (328)
                      |||++|
T Consensus       112 ~e~~~~  117 (329)
T 3gbz_A          112 FEYAEN  117 (329)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.74  E-value=0.00014  Score=67.19  Aligned_cols=79  Identities=10%  Similarity=-0.056  Sum_probs=52.7

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCC-----CCcccceecccc---CCCc
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRT-----IRAPRPFKVGAL---PTGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~-----v~VP~~~~~~~~---~~~~  121 (328)
                      .-++.+|.|..+.||++... ++ .+++|+.....  ...+..|+++++.+.+...     ..+.+++.....   ....
T Consensus        40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~  119 (397)
T 1wak_A           40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH  119 (397)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEE
T ss_pred             EEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCce
Confidence            44667899999999999764 33 78899886432  3456789999999976421     124445443221   1246


Q ss_pred             eEEEEeeecCC
Q 020294          122 SYIIMEFIEFG  132 (328)
Q Consensus       122 ~~~v~e~l~G~  132 (328)
                      .++|||++.|.
T Consensus       120 ~~lv~e~~~~~  130 (397)
T 1wak_A          120 ICMVFEVLGHH  130 (397)
T ss_dssp             EEEEECCCCCB
T ss_pred             EEEEEeccCcc
Confidence            79999999654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.73  E-value=0.00037  Score=61.53  Aligned_cols=74  Identities=14%  Similarity=-0.044  Sum_probs=51.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ...+|.|..+.||+.... ++ .+++|.....   ....+..|+..++.+.+   -.+++++..... .+..+++||+++
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~  102 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH---KNIVQYLGSFSE-NGFIKIFMEQVP  102 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCC---CCEeeEeeEEEe-CCcEEEEEEeCC
Confidence            446888999999999863 34 6888876532   23556788888877743   245556655433 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus       103 ~~~  105 (295)
T 2clq_A          103 GGS  105 (295)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.73  E-value=0.00012  Score=67.89  Aligned_cols=57  Identities=12%  Similarity=0.063  Sum_probs=37.2

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCccccee
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK  113 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~  113 (328)
                      -.-.+.+|.|..+.||++... ++ .+++|..... .....+|+++++.|.+   -.+.+++.
T Consensus         9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~E~~il~~l~h---pnIv~l~~   67 (383)
T 3eb0_A            9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD-PRYKNRELDIMKVLDH---VNIIKLVD   67 (383)
T ss_dssp             EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC-TTSCCHHHHHHTTCCC---TTBCCEEE
T ss_pred             EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHHcCC---CCccchhh
Confidence            345677899999999999763 34 7888976543 2234478888887743   23445544

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.73  E-value=0.00016  Score=68.20  Aligned_cols=76  Identities=16%  Similarity=-0.018  Sum_probs=52.9

Q ss_pred             eeeeeeeCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           53 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      ....+.+|.|..+.||.....+| .+++|.......+.+..|+++++.+.++  -.+.+++..... .+..+++||+++|
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--pnIv~~~~~~~~-~~~~~lv~E~~~g   93 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDH--PNVIRYYCSETT-DRFLYIALELCNL   93 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTS--TTBCCEEEEEEC-SSEEEEEECCCSE
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCC--CCcCeEEEEEec-CCeEEEEEecCCC
Confidence            34456689999999987666555 7889986543334567889888877543  246666665443 4678999999976

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.73  E-value=0.00021  Score=65.94  Aligned_cols=76  Identities=13%  Similarity=0.122  Sum_probs=50.1

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      .-++.+|.|..+.||++... ++ .+++|.....  .   ...+..|+.+++.+.+   -.+.+++......     ...
T Consensus        28 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH---KNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECSCCSTTTCCE
T ss_pred             eEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC---CCccceEEeeccccccccccc
Confidence            34677899999999998754 33 7888986532  1   2345678888877743   2455555543221     136


Q ss_pred             eEEEEeeecCC
Q 020294          122 SYIIMEFIEFG  132 (328)
Q Consensus       122 ~~~v~e~l~G~  132 (328)
                      .++|||+++|.
T Consensus       105 ~~lv~e~~~~~  115 (371)
T 2xrw_A          105 VYIVMELMDAN  115 (371)
T ss_dssp             EEEEEECCSEE
T ss_pred             eEEEEEcCCCC
Confidence            79999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=97.72  E-value=0.00031  Score=66.40  Aligned_cols=77  Identities=18%  Similarity=-0.007  Sum_probs=53.6

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           52 HITKICPVGGGCINLASRYGTDA-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      .....+.+|.|..+.|+.....+ ..+++|...........+|.++++.+.++  -.+.+++..... .+..+++||+++
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--pnIv~l~~~~~~-~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEH--PNVIRYFCTEKD-RQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCC--TTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCC--CCcCeEEEEEec-CCEEEEEEECCC
Confidence            34556678888888866555544 48899987655445577899998887543  245566655443 467799999998


Q ss_pred             C
Q 020294          131 F  131 (328)
Q Consensus       131 G  131 (328)
                      |
T Consensus       102 g  102 (432)
T 3p23_A          102 A  102 (432)
T ss_dssp             E
T ss_pred             C
Confidence            7

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.72  E-value=0.00023  Score=63.64  Aligned_cols=75  Identities=12%  Similarity=0.100  Sum_probs=52.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-.-++.+|.|..+.||++...++ .+++|+....     ....+..|++.++.+... .-.+.+++..... .+..+++
T Consensus        29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv  106 (313)
T 3cek_A           29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMV  106 (313)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGG-CTTBCCEEEEEEC-SSEEEEE
T ss_pred             eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhcccc-CCceEEEEEEeec-CCEEEEE
Confidence            344567789999999999987655 6888987532     124567899999999753 2346666665543 4678999


Q ss_pred             Eee
Q 020294          126 MEF  128 (328)
Q Consensus       126 ~e~  128 (328)
                      ||+
T Consensus       107 ~e~  109 (313)
T 3cek_A          107 MEC  109 (313)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            994

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=97.71  E-value=0.0003  Score=64.87  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=43.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-----C
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----T  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~  119 (328)
                      .-.-++.+|.|..+.||+.... +| .+++|.....  .   ...+.+|+.+++.+.+.   .+.+++......     .
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE---NVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBT---TBCCCSEEECSCSSTTTC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCc---CCCCceeeEecCCccccC
Confidence            3445778999999999998763 34 7889987432  1   23456788888888642   344444433221     1


Q ss_pred             CceEEEEeee
Q 020294          120 GGSYIIMEFI  129 (328)
Q Consensus       120 ~~~~~v~e~l  129 (328)
                      ...+++||++
T Consensus       103 ~~~~lv~e~~  112 (367)
T 1cm8_A          103 TDFYLVMPFM  112 (367)
T ss_dssp             CCCEEEEECC
T ss_pred             ceEEEEEecC
Confidence            3459999998

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.70  E-value=8.6e-05  Score=73.76  Aligned_cols=72  Identities=15%  Similarity=0.094  Sum_probs=51.5

Q ss_pred             eeeCCcccceeEEEEeC---Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           57 CPVGGGCINLASRYGTD---AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~---~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      +.+|.|....||+....   .+ .+.+|+....     ....+..|+++++.|.+   -.+.+++.+..  .+..++|||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~--~~~~~lv~E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVME  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCCEEEEEE
Confidence            35899999999997432   22 6888987532     12457789999998853   34666776654  356789999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus       450 ~~~~g~  455 (635)
T 4fl3_A          450 MAELGP  455 (635)
T ss_dssp             CCTTEE
T ss_pred             ccCCCC
Confidence            999975

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.67  E-value=5.7e-05  Score=75.64  Aligned_cols=78  Identities=17%  Similarity=0.081  Sum_probs=52.0

Q ss_pred             eeeeeeCCcccceeEEEEeC--Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC----ce
Q 020294           54 TKICPVGGGCINLASRYGTD--AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG----GS  122 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~--~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~----~~  122 (328)
                      .-.+.+|.|..+.||+....  ++ .+++|......    ...+..|..+++.|.+   -.+++++.+....+.    ..
T Consensus        83 ~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           83 EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVH---PSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             EEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCC---TTBCCEEEEEEEECTTSCEEE
T ss_pred             EEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCC---CCcCeEeeeEeecCCCCCcee
Confidence            34567888999999999763  34 78899775322    2345567777666643   347777765443111    15


Q ss_pred             EEEEeeecCCCC
Q 020294          123 YIIMEFIEFGSS  134 (328)
Q Consensus       123 ~~v~e~l~G~~~  134 (328)
                      |+||||++|+.+
T Consensus       160 ~lv~E~~~g~~L  171 (681)
T 2pzi_A          160 YIVMEYVGGQSL  171 (681)
T ss_dssp             EEEEECCCCEEC
T ss_pred             EEEEEeCCCCcH
Confidence            999999999865

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.66  E-value=0.00025  Score=64.67  Aligned_cols=74  Identities=11%  Similarity=-0.117  Sum_probs=36.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC------CCceEEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP------TGGSYII  125 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~------~~~~~~v  125 (328)
                      .+.+|.|..+.||++... ++ .+++|.....  .......|.+.+..+.+   -.+.+++.+....      ....+++
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH---PNIVQLQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCC---TTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCC---CCcccHHHhhhccccccccceeEEEE
Confidence            456889999999999864 33 7889976432  22333344444444432   3455555443210      1236899


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      |||++|.
T Consensus       105 ~e~~~~~  111 (360)
T 3e3p_A          105 MEYVPDT  111 (360)
T ss_dssp             EECCSCB
T ss_pred             eeccccc
Confidence            9999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.64  E-value=0.00014  Score=65.10  Aligned_cols=78  Identities=10%  Similarity=-0.137  Sum_probs=49.6

Q ss_pred             eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---------CcchHHHHHHHHHHHHhcC-CCCcccceeccccCCCce
Q 020294           55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---------GPSMFEGEALGLGAMYETR-TIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~-~v~VP~~~~~~~~~~~~~  122 (328)
                      -.+.+|.|..+.||++... + ..+++|+....         ....+..|...+..+.... .-.+++++..... .+..
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-~~~~  113 (312)
T 2iwi_A           35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET-QEGF  113 (312)
T ss_dssp             EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------C
T ss_pred             EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec-CCeE
Confidence            3567888999999999763 3 37999987532         1234557899998886421 1246666665433 4577


Q ss_pred             EEEEee-ecCCC
Q 020294          123 YIIMEF-IEFGS  133 (328)
Q Consensus       123 ~~v~e~-l~G~~  133 (328)
                      +++||+ ++|+.
T Consensus       114 ~~v~e~~~~~~~  125 (312)
T 2iwi_A          114 MLVLERPLPAQD  125 (312)
T ss_dssp             EEEEECCSSEEE
T ss_pred             EEEEEecCCCCC
Confidence            999998 67764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.64  E-value=7.9e-05  Score=73.70  Aligned_cols=71  Identities=14%  Similarity=0.048  Sum_probs=51.0

Q ss_pred             eeCCcccceeEEEEeC---Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD---AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~---~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+|.|....||+....   ++ .+.+|+....    ....+..|+++++.|.+   -.+.+++.+..  .+..++||||+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~h---pniv~l~~~~~--~~~~~lv~E~~  417 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA  417 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEec--cCCeEEEEEeC
Confidence            5899999999997642   23 5888987642    23557788888887743   34666776654  35689999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus       418 ~~g~  421 (613)
T 2ozo_A          418 GGGP  421 (613)
T ss_dssp             TTCB
T ss_pred             CCCc
Confidence            9985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.63  E-value=0.00016  Score=68.02  Aligned_cols=76  Identities=13%  Similarity=0.003  Sum_probs=52.1

Q ss_pred             eeeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      .-.+.+|.|....||+.....  ..+++|+....           ....+..|+++++.|.+   -.+.+++....  .+
T Consensus       138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~~~--~~  212 (419)
T 3i6u_A          138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH---PCIIKIKNFFD--AE  212 (419)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC---TTBCCCCEEEE--SS
T ss_pred             EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cC
Confidence            335678999999999987643  37888875321           12347789999998853   23555555433  35


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++|+.+
T Consensus       213 ~~~lv~e~~~~g~L  226 (419)
T 3i6u_A          213 DYYIVLELMEGGEL  226 (419)
T ss_dssp             EEEEEEECCTTCBG
T ss_pred             ceEEEEEcCCCCcH
Confidence            67999999999754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.62  E-value=0.00028  Score=70.33  Aligned_cols=75  Identities=19%  Similarity=0.121  Sum_probs=51.5

Q ss_pred             eeeeeCCcccceeEEEEeCC----c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           55 KICPVGGGCINLASRYGTDA----G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~----~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      -.+.+|.|....||+.....    + .+.+|......    ...+..|+.+++.+.+   -.+.+++....  ++..++|
T Consensus       394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~~~~~--~~~~~lv  468 (656)
T 2j0j_A          394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPVWII  468 (656)
T ss_dssp             EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEE
T ss_pred             EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEe--cCceEEE
Confidence            35678999999999987532    1 47778765422    2446678888877743   34666666543  4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      |||++|+.+
T Consensus       469 ~E~~~~g~L  477 (656)
T 2j0j_A          469 MELCTLGEL  477 (656)
T ss_dssp             EECCTTCBH
T ss_pred             EEcCCCCcH
Confidence            999998753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=97.60  E-value=0.0001  Score=68.63  Aligned_cols=75  Identities=8%  Similarity=-0.070  Sum_probs=48.3

Q ss_pred             eeeeeeCCcccceeEEEEeC-CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc----C-CCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~-~~~~~~v~e  127 (328)
                      .-++.+|.|..+.||++... ++.+++|..... .....+|.++++.|.+   -.+.+++.+...    . ....++|||
T Consensus        43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~-~~~~~~E~~il~~l~h---~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-KRFKNRELQIMRIVKH---PNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTEEEEEEEEECC-TTSCCHHHHHHHTCCC---TTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecC-cchHHHHHHHHHhCCC---CCcceEEEEEEecCCCCCceEEEEEee
Confidence            34667899999999999874 446777765432 2233478888888854   235555543211    0 123679999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      |++|.
T Consensus       119 ~~~~~  123 (394)
T 4e7w_A          119 YVPET  123 (394)
T ss_dssp             CCSEE
T ss_pred             ccCcc
Confidence            99884

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=97.60  E-value=0.00024  Score=64.87  Aligned_cols=76  Identities=17%  Similarity=0.077  Sum_probs=49.6

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCC-----C
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT-----G  120 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~-----~  120 (328)
                      -...+.+|.|..+.||++... +| .+++|......     ...+..|..+++.+.+   -.+.+++.......     .
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH---ENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSGGGCC
T ss_pred             EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC---CCcccHhheEecccccccce
Confidence            344677899999999999764 34 78999875421     2345678888887753   23445554433211     2


Q ss_pred             ceEEEEeeecC
Q 020294          121 GSYIIMEFIEF  131 (328)
Q Consensus       121 ~~~~v~e~l~G  131 (328)
                      ..+++||+++|
T Consensus       103 ~~~lv~e~~~~  113 (353)
T 3coi_A          103 DFYLVMPFMQT  113 (353)
T ss_dssp             CCEEEEECCSE
T ss_pred             eEEEEeccccC
Confidence            35999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.59  E-value=0.00029  Score=63.42  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=46.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      ...-++.+|.|..+.||++... ++ .+++|.......    ..+..|..  ..+.....-.+.+++..... .+..+++
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~--~~~~~~~h~niv~~~~~~~~-~~~~~lv   99 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD--VVMRSSDCPYIVQFYGALFR-EGDCWIC   99 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHH--HHHSSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHH--HHHHcCCCCcEeeeeeEEEe-CCceEEE
Confidence            3455677899999999999874 34 789998754321    11222222  12222112245666655433 4678999


Q ss_pred             EeeecCC
Q 020294          126 MEFIEFG  132 (328)
Q Consensus       126 ~e~l~G~  132 (328)
                      ||+++|.
T Consensus       100 ~e~~~~~  106 (327)
T 3aln_A          100 MELMSTS  106 (327)
T ss_dssp             ECCCSEE
T ss_pred             EeecCCC
Confidence            9999873

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.53  E-value=0.00027  Score=66.44  Aligned_cols=75  Identities=9%  Similarity=-0.025  Sum_probs=47.9

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccc---c-C-CCceEEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-P-TGGSYIIM  126 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~-~-~~~~~~v~  126 (328)
                      .-.+.+|.|....||+.... ++ .+++|..... .....+|+++++.|.+.   .+.+++....   . . ....+++|
T Consensus        57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~E~~il~~l~hp---niv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRFKNRELQIMRKLDHC---NIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-TTSCCHHHHHHHTCCCT---TBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             EeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-chhHHHHHHHHHHcCCC---CccceeeEEeccCCCCcceeEEeeh
Confidence            34567899999999999874 34 7888876543 23345789888887542   3444433221   1 0 12357899


Q ss_pred             eeecCC
Q 020294          127 EFIEFG  132 (328)
Q Consensus       127 e~l~G~  132 (328)
                      ||++|.
T Consensus       133 e~~~~~  138 (420)
T 1j1b_A          133 DYVPET  138 (420)
T ss_dssp             ECCCEE
T ss_pred             hccccc
Confidence            999873

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=97.53  E-value=0.00023  Score=64.88  Aligned_cols=80  Identities=13%  Similarity=0.014  Sum_probs=43.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-----ccEEEEecCCCCcchHHHHHHHHHHHH------------hcCCCCcccceec
Q 020294           52 HITKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIGPSMFEGEALGLGAMY------------ETRTIRAPRPFKV  114 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~~~~~~~E~~~l~~L~------------~~~~v~VP~~~~~  114 (328)
                      .-.-.+.+|.|....||++....     ..+++|...... .....|...++.+.            ....-.+++++..
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC--CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-cchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            34456778999999999998743     378899876432 22344544444332            1112346666665


Q ss_pred             cccC---CCceEEEEeeecCCC
Q 020294          115 GALP---TGGSYIIMEFIEFGS  133 (328)
Q Consensus       115 ~~~~---~~~~~~v~e~l~G~~  133 (328)
                      ....   .+..+++||++ |+.
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~  137 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GID  137 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEE
T ss_pred             cccccCCCcEEEEEEecc-CCC
Confidence            4321   35779999999 654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.51  E-value=0.00073  Score=60.23  Aligned_cols=76  Identities=13%  Similarity=0.013  Sum_probs=38.7

Q ss_pred             eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCc-ch-HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGP-SM-FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~-~~-~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ..-++.++.|....||++... + ..+++|....... .. .+...+....+.....-.+.+++..... .+..+++||+
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~  105 (318)
T 2dyl_A           27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAMEL  105 (318)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred             ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEEec
Confidence            344677899999999999874 3 4789998764321 11 1111111112222112346666665443 4678999999


Q ss_pred             e
Q 020294          129 I  129 (328)
Q Consensus       129 l  129 (328)
                      +
T Consensus       106 ~  106 (318)
T 2dyl_A          106 M  106 (318)
T ss_dssp             C
T ss_pred             c
Confidence            8

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.50  E-value=0.0011  Score=59.07  Aligned_cols=77  Identities=14%  Similarity=0.103  Sum_probs=46.5

Q ss_pred             ceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceecccc---------
Q 020294           52 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---------  117 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---------  117 (328)
                      .-.-++.+|.|....||+..... + .+++|......   ...+..|+++++.+.+   -.+.+++.....         
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH---DNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECTTSCBCCC--
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCC---CCeeEEEEecccccccccccc
Confidence            45567789999999999998753 3 78899765432   2445678888777743   234444433210         


Q ss_pred             ----CCCceEEEEeeecC
Q 020294          118 ----PTGGSYIIMEFIEF  131 (328)
Q Consensus       118 ----~~~~~~~v~e~l~G  131 (328)
                          ..+..+++|||++|
T Consensus        89 ~~~~~~~~~~lv~e~~~~  106 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYMET  106 (320)
T ss_dssp             --CCSCSEEEEEEECCSE
T ss_pred             ccccccCceeEEeeccCC
Confidence                13567999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.49  E-value=0.00017  Score=64.52  Aligned_cols=77  Identities=9%  Similarity=-0.051  Sum_probs=52.4

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294           52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  126 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~  126 (328)
                      ...-.+.++.|..+.||+.... +.+++|.....     ....+..|+..++.+.+   -.+.+++..... .+..+++|
T Consensus        34 ~~~~~~~lg~G~~g~V~~~~~~-~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~iv~  108 (319)
T 2y4i_B           34 QLEIGELIGKGRFGQVYHGRWH-GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH---ENVVLFMGACMS-PPHLAIIT  108 (319)
T ss_dssp             CEECCCBCCCSSSSEEEEEEES-SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC---TTBCCCCEEEEC-SSCEEEEC
T ss_pred             HeEEeeEeccCCceEEEEEEEc-CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC---CCEeEEEEEEec-CCceEEEe
Confidence            4455677899999999998765 46888876531     23445677777766643   235556655443 45789999


Q ss_pred             eeecCCC
Q 020294          127 EFIEFGS  133 (328)
Q Consensus       127 e~l~G~~  133 (328)
                      ||++|+.
T Consensus       109 e~~~~~~  115 (319)
T 2y4i_B          109 SLCKGRT  115 (319)
T ss_dssp             BCCCSEE
T ss_pred             ecccCCc
Confidence            9999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.47  E-value=0.00039  Score=69.26  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceecccc-----CCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-----~~~~~~~  124 (328)
                      .+.+|.|..+.||+.... ++ .+++|+.... .   ...+..|+++++.|.+   -.+.+++.....     ..+..++
T Consensus        19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~H---pnIV~l~~v~~~~~~~~~~~~~~L   95 (676)
T 3qa8_A           19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH---PNVVSAREVPDGLQKLAPNDLPLL   95 (676)
T ss_dssp             CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCB---TTBCCEEECCTTTCCCCTTSSCCC
T ss_pred             EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCC---CCCCceeeeecccccccCCCeEEE
Confidence            456788999999998753 33 7899987642 1   3446779999888853   234445444221     1457799


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|+.
T Consensus        96 VmEy~~ggs  104 (676)
T 3qa8_A           96 AMEYCEGGD  104 (676)
T ss_dssp             EEECCSSCB
T ss_pred             EEEeCCCCC
Confidence            999999975

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=97.46  E-value=0.00049  Score=62.47  Aligned_cols=72  Identities=15%  Similarity=-0.093  Sum_probs=45.0

Q ss_pred             eeCCcccceeEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEEEEeeecCC
Q 020294           58 PVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIMEFIEFG  132 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~v~e~l~G~  132 (328)
                      .+|.|....||++...  +..+++|+....  .....|...+..+.+  .-.+++++......   ....++||||++|+
T Consensus        36 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~e~~~~~~~~~--h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg  111 (336)
T 3fhr_A           36 VLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQASG--GPHIVCILDVYENMHHGKRCLLIIMECMEGG  111 (336)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEESS--HHHHHHHHHHHHHTT--STTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEecCc--HHHHHHHHHHHHhcC--CCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence            4789999999999875  348899987542  223344433322222  23566666553321   23479999999997


Q ss_pred             C
Q 020294          133 S  133 (328)
Q Consensus       133 ~  133 (328)
                      .
T Consensus       112 ~  112 (336)
T 3fhr_A          112 E  112 (336)
T ss_dssp             E
T ss_pred             C
Confidence            5

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=97.38  E-value=0.00044  Score=63.24  Aligned_cols=79  Identities=10%  Similarity=-0.074  Sum_probs=52.2

Q ss_pred             eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcC--------CCCcccceeccccC--
Q 020294           53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETR--------TIRAPRPFKVGALP--  118 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~--------~v~VP~~~~~~~~~--  118 (328)
                      -.-++.+|.|..+.||++... + ..+++|+....  ....+..|..+++.+.+..        .-.+++++......  
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~  100 (373)
T 1q8y_A           21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP  100 (373)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence            344677899999999999863 3 37899988643  2345678999999887531        01355555543221  


Q ss_pred             -CCceEEEEeeecCC
Q 020294          119 -TGGSYIIMEFIEFG  132 (328)
Q Consensus       119 -~~~~~~v~e~l~G~  132 (328)
                       ....+++||++ |+
T Consensus       101 ~~~~~~lv~e~~-~~  114 (373)
T 1q8y_A          101 NGVHVVMVFEVL-GE  114 (373)
T ss_dssp             TEEEEEEEECCC-CE
T ss_pred             CCceEEEEEecC-CC
Confidence             12678999998 54

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.35  E-value=0.00067  Score=62.53  Aligned_cols=77  Identities=16%  Similarity=0.069  Sum_probs=45.7

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-----C
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----T  119 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~  119 (328)
                      .-.-++.+|.|..+.||+.... ++ .+++|......     ...+.+|+.+++.|.+   -.+.+++......     .
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH---ENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSGGGC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEecCCccccC
Confidence            3445678999999999999753 34 78899875321     2345678888888753   2344444432211     2


Q ss_pred             CceEEEEeeecC
Q 020294          120 GGSYIIMEFIEF  131 (328)
Q Consensus       120 ~~~~~v~e~l~G  131 (328)
                      ...++++++..+
T Consensus       107 ~~~~lv~e~~~~  118 (367)
T 2fst_X          107 NDVYLVTHLMGA  118 (367)
T ss_dssp             CCCEEEEECCCE
T ss_pred             CeEEEEecccCC
Confidence            456899998843

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.21  E-value=0.0018  Score=60.57  Aligned_cols=50  Identities=16%  Similarity=0.060  Sum_probs=35.6

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHh
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYE  102 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~  102 (328)
                      +...+.+|.|....||+.... ++ .+.||+....      ....++.|...++.|.+
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            444567899999999999854 34 8999987621      23557788887776653

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=86.86  E-value=1.8  Score=38.91  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=48.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc---------------
Q 020294           53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---------------  117 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---------------  117 (328)
                      +..++...+|. ..+|.+.++.+.||||..+     .+..|.-. ..|+...++|+|..--....               
T Consensus        71 v~~I~~s~~Gs-tgvff~~td~~~~VVK~s~-----~l~~E~l~-s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~  143 (342)
T 1cja_A           71 FKGIERSEKGT-EGLFFVETESGVFIVKRST-----NIESETFC-SLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID  143 (342)
T ss_dssp             EEEEEECCSTT-SCEEEEEESSCEEEEECCT-----THHHHHHH-HHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred             eeEEEeccCCC-CCeEEEEeCCCEEEEeCcH-----HHHHHHHH-HHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence            55666667664 5788888888899999542     23455443 44555568999983322111               


Q ss_pred             C---------CCceEEEEeeecCCCC
Q 020294          118 P---------TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       118 ~---------~~~~~~v~e~l~G~~~  134 (328)
                      .         ++..+++|+|++|..+
T Consensus       144 ~~~~~l~~l~~~~~~l~meyv~G~~L  169 (342)
T 1cja_A          144 KSFRVITTLANQANILLMELVRGITL  169 (342)
T ss_dssp             SSSCHHHHHTTCSEEEEEECCCEEES
T ss_pred             hhhHHHHHhhcccceehhhhcCCCcc
Confidence            0         2356799999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	328
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	4e-10
d1nd4a_	255	d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferas	1e-09
d1j7la_	263	d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phos	2e-06
d1zyla1	325	d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId:	0.001
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score = 57.9 bits (139), Expect = 4e-10
 Identities = 39/306 (12%), Positives = 75/306 (24%), Gaps = 43/306 (14%)

Query: 28  RTFAMAALSDDPIREWILSEG--KATHITKICPVGGGCINLASRYGTDAG--SFFVK--- 80
           +T     L++       +  G   +        +G G +N            +  +K   
Sbjct: 1   KTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAV 60

Query: 81  -TNRSIGPSMF------EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133
              + +G S          E+  L    E      PR F         +  +ME +    
Sbjct: 61  PYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLK 117

Query: 134 SRGNQ---------------SVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 178
                                  GK L          K     V                
Sbjct: 118 IARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLV 177

Query: 179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 238
           + + + +H      +                     L   F        L+HGDL +G+I
Sbjct: 178 FTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFL--TSAETLIHGDLHTGSI 235

Query: 239 SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 298
            + ++   VI     +YG    + G      F  + + +       + G ++      + 
Sbjct: 236 FASEHETKVIDPEFAFYGPIGFDVGQ-----FIANLFLNALS----RDGADREPLYEHVN 286

Query: 299 HYLNHY 304
                +
Sbjct: 287 QVWETF 292

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 33/253 (13%), Positives = 64/253 (25%), Gaps = 32/253 (12%)

Query: 58  PVGGGCINLAS-RYGTDAGS-FFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 115
               GC + A  R         FVKT+ S   +  + EA  L  +  T  +       V 
Sbjct: 17  QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTG-VPCAAVLDVV 75

Query: 116 ALPTGGSYIIMEFIEFGSSRGNQ-------SVFGKKLAEMHKAGKSSKGFGFDVDNTIGS 168
                  ++++  +       +        S+    +  +H    ++  F     + I  
Sbjct: 76  TEAGRD-WLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIER 134

Query: 169 TPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCL 228
                +      +   E   G                    RL   +    +       +
Sbjct: 135 ARTRMEAGLVDQDDLDEEHQGLAPAELFA------------RLKARMPDGED-----LVV 177

Query: 229 LHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFG---MSWCAGFGGSFYNSYFEVMPK 284
            HGD    NI  +       +D           +            GG + + +  +   
Sbjct: 178 THGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGI 237

Query: 285 QPGFEKRRDLYML 297
                +R   Y L
Sbjct: 238 AAPDSQRIAFYRL 250

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 23/221 (10%), Positives = 54/221 (24%), Gaps = 33/221 (14%)

Query: 60  GGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRPFKVGA 116
            G       +   +  + ++K   S         E E   +  +     +  P+      
Sbjct: 23  EGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK--LPVPKVLHFER 80

Query: 117 LPTGGSYIIMEFIEFGSSRGNQ----------SVFGKKLAEMHKAGKSSKGFGFDVDNTI 166
              G S ++M   +                   ++ + +   H    S   +   +D+ +
Sbjct: 81  -HDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRL 139

Query: 167 GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEP 226
                        +++   + L        ++       +  +  +K   P       E 
Sbjct: 140 A-----------ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP-----EEEL 183

Query: 227 CLLHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFGMSW 266
              HGDL   NI          +D           +     
Sbjct: 184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCV 224

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 39/281 (13%), Positives = 71/281 (25%), Gaps = 44/281 (15%)

Query: 30  FAMAALSDDPIREWILSEGKATHITKICPVGGGCINLAS------RYGTDAGS-FFVKTN 82
           F    L  D I + +   G          V  G   L S      ++  +    F VK  
Sbjct: 3   FTFQTLHPDTIMDALFEHG--------IRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFY 54

Query: 83  RSIGPS--MFEGEALGLGAMYETRT-IRAPRPFKVGALPTGGSYIIMEFIEFG------S 133
           R    +      E      +      + AP  F    L     +    F   G       
Sbjct: 55  RPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD 114

Query: 134 SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK 193
           +       G+ L  MH+ G+                 +  K   +     +  +  +   
Sbjct: 115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKA 174

Query: 194 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 253
                            L+  +   +   +     LHGD  +GNI    +G   +     
Sbjct: 175 TD--------------ELIAAVTAHWRE-DFTVLRLHGDCHAGNILWR-DGPMFVDLDDA 218

Query: 254 YYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDL 294
             G   A   +        +      E + +   +E+  + 
Sbjct: 219 RNGP--AVQDLWMLLNGDKAEQRMQLETIIE--AYEEFSEF 255

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.002
 Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 160 FDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLF 219
            ++  T  S     K +   +  + EH L   L   L ++  S I +    L+  L  + 
Sbjct: 75  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 134

Query: 220 EGVNVEPCLLHGDLWSGNISSDKNGEPVILD--PACYYGHNEAEFGMSWCAGFGGSFYNS 277
                   +LH D+ + N+   ++G   + D   A  +   +     +       + +  
Sbjct: 135 R-----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-PNRYTNRVVTLWYR 188

Query: 278 YFEVMPKQPGFEKRRDLY----MLYHYLNHYNLFGSGYRSSALSIIDDYL 323
             E++  +  +    DL+    ++        +         L++I    
Sbjct: 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	328
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	99.96
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	99.94
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	99.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.89
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	99.89
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	99.77
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.8
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.77
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.67
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.64
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.63
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.56
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.55
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.55
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.54
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.54
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.53
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.52
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.49
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.49
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.44
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.44
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.43
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.43
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.41
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.41
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.39
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.39
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.38
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.37
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.36
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.35
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.34
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.33
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.32
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.32
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.3
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.29
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.29
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.28
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.27
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.25
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.25
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.19
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.19
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	98.18
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.15
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.12
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.12
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.11
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.06
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.05
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.05
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.03
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.03
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.03
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.98
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.94
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.92
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.9
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.87
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.86
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.82
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.86
d1cjaa_	342	Actin-fragmin kinase, catalytic domain {Physarum p	94.2

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.96  E-value=6.3e-28  Score=218.84  Aligned_cols=242  Identities=14%  Similarity=0.153  Sum_probs=170.9

Q ss_pred             hcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccc
Q 020294           33 AALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRP  111 (328)
Q Consensus        33 ~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~  111 (328)
                      |.++.++|+.+|+++++| ++.+++++.+|..|++|+|++++|+||||+++.. +...+..|.+++.+|++. ++|||.|
T Consensus         1 T~ls~~el~~~l~~Y~lg-~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~~~~~l~~~~~~l~~L~~~-g~pvp~p   78 (316)
T d2ppqa1           1 TDITEDELRNFLTQYDVG-SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAK-GLSCPLP   78 (316)
T ss_dssp             CCCCHHHHHHHHTTBCCC-CEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHT-TCCCCCB
T ss_pred             CCCCHHHHHHHHHhCCCC-CceEeecCCCCcccCeEEEEECCCcEEEEEcCCCCCHHHHHHHHHHHHhhhhc-ccccccc
Confidence            678999999999999887 8999999999999999999999999999998753 567788899999999997 7999999


Q ss_pred             eeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHH
Q 020294          112 FKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF  182 (328)
Q Consensus       112 ~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~  182 (328)
                      +......     .+..+.++.++.|....    .....+|..++++|.....   +..+.+         ..+...|...
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~  146 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEG---FEIKRP---------NALSVDGWKV  146 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTT---CCCCCB---------CTTSHHHHHH
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhh---cccccc---------cccchhhcch
Confidence            8765432     57789999999998653    4678999999999999874   222111         1111112111


Q ss_pred             HHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhh
Q 020294          183 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAE  261 (328)
Q Consensus       183 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~p~~D  261 (328)
                      ..     ...... ...........+++..+.+...... ..+.++||||++++||+++++++.+|||| +++.|++.+|
T Consensus       147 ~~-----~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~-~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~~~~~D  219 (316)
T d2ppqa1         147 LW-----DKSEER-ADEVEKGLREEIRPEIDYLAAHWPK-DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYD  219 (316)
T ss_dssp             HH-----HHHGGG-GGGTSTTHHHHHHHHHHHHHHHCCC-SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHH
T ss_pred             hh-----hHHHHh-hhhcchhHHHHHHHHHHhhhccCcc-ccccccccCCcchhhhhcccccceeEecccccccchhhhh
Confidence            11     000000 0111222334444444444433333 46889999999999999998887899999 5899999999


Q ss_pred             hhhh---hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHHH
Q 020294          262 FGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLY  295 (328)
Q Consensus       262 La~~---~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~ly  295 (328)
                      ||++   ||.    .+.    .+|++||++.+|+++.-.+-+..+
T Consensus       220 LAi~~~~~~~~~~~~~~~~~~~afl~GY~~~rpLs~~E~~~l~~~  264 (316)
T d2ppqa1         220 VSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLL  264 (316)
T ss_dssp             HHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhcchhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            9975   442    122    379999999999986433334443

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.1e-27  Score=214.01  Aligned_cols=240  Identities=16%  Similarity=0.153  Sum_probs=166.4

Q ss_pred             hhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCc
Q 020294           32 MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA  108 (328)
Q Consensus        32 ~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~V  108 (328)
                      |..+++|.|..-|.+.|+.. -..+.++ +|..|.||+|++++| +||+|++++.  +.+.+..|++++.+|++. ++||
T Consensus         5 f~~L~pd~i~~al~~~g~~~-~~~~~~L-~s~EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~-gipv   81 (325)
T d1zyla1           5 FQTLHPDTIMDALFEHGIRV-DSGLTPL-NSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVND-EVPV   81 (325)
T ss_dssp             CCCCCHHHHHHHHHHTTCCC-CSCCEEE-CCSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT-TCSB
T ss_pred             ccccCHHHHHHHHHHcCCCC-CcCcccc-ccccceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhc-CCCC
Confidence            56789999999998886542 2345666 478999999999887 6999999763  456688999999999987 7999


Q ss_pred             ccceeccccC----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHH
Q 020294          109 PRPFKVGALP----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI  180 (328)
Q Consensus       109 P~~~~~~~~~----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~  180 (328)
                      |.|+..+...    ++..+.+++|++|..+.    ...+++|+.||+||.+...   +..+..           ...++.
T Consensus        82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~---~~~~~r-----------~~~d~~  147 (325)
T d1zyla1          82 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRK---QLFIHR-----------PTIGLN  147 (325)
T ss_dssp             CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTS---SCCSSS-----------CBCSHH
T ss_pred             CCceecCCCeeeeeeeEEEEEEeecCCcCCCCCCHHHHHHHHHHHHHHHhhccc---CCcccc-----------CCCCHH
Confidence            9998765332    57889999999998653    4679999999999998864   221110           011222


Q ss_pred             HHHHHhhhHHHHHHHHhh-CCChH----HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccc
Q 020294          181 EFYAEHRLGYQLKLALDQ-YGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACY  254 (328)
Q Consensus       181 ~~~~~~~l~~~~~~~~~~-~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~  254 (328)
                      .+...  ...+   ..+. ..+++    ..+.++++.+.+...+.. ..+.++||||+|++|||+++ + ..+||| +|+
T Consensus       148 ~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~  219 (325)
T d1zyla1         148 EYLIE--PRKL---FEDATLIPSGLKAAFLKATDELIAAVTAHWRE-DFTVLRLHGDCHAGNILWRD-G-PMFVDLDDAR  219 (325)
T ss_dssp             HHTHH--HHHH---HHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS-CSCCEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred             HHhhh--hHHH---HHHcCcCCHHHHHHHHHHHHHHHHHHHHhccc-cCCceeecCCCCcccEEEeC-C-ceEEechhcc
Confidence            22211  1111   1111 12222    334455555555555443 46789999999999999974 3 579998 688


Q ss_pred             cCCchhhhhhhhhcC------CChhhHHHHhhhCCCCCCHHHHHHHHH
Q 020294          255 YGHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYM  296 (328)
Q Consensus       255 ~G~p~~DLa~~~~~~------~~~~f~~~Y~~~~pl~~~~~~r~~ly~  296 (328)
                      +|++++||+++....      .-.+|++||++++|+++.....+..+.
T Consensus       220 ~g~~~~DLa~~l~~~~~~~~~~~~~~l~GY~~~~~l~~~el~~i~~l~  267 (325)
T d1zyla1         220 NGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLR  267 (325)
T ss_dssp             EECTTHHHHTTCCSSHHHHHHHHHHHHHHHTTTSCCCGGGGGGHHHHH
T ss_pred             cCcHHHHHHHhccccccCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            999999999753111      124799999999999876544455443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=99.93  E-value=5.5e-26  Score=199.21  Aligned_cols=218  Identities=16%  Similarity=0.162  Sum_probs=142.3

Q ss_pred             eeeeeCCcccc-eeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           55 KICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        55 ~v~~i~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .++++++|.+| .+|+++++++ .+|||..+......+..|.+.+++|++. ++|||+++..... ++..++||+|++|.
T Consensus        14 ~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~-gvpvP~v~~~~~~-~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          14 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATT-GVPCAAVLDVVTE-AGRDWLLLGEVPGQ   91 (255)
T ss_dssp             EEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTT-TCCBCCEEEEEEC-SSCEEEEEECCSSE
T ss_pred             ceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHhc-CCCCCceeeeccc-ccceEEEEEeeecc
Confidence            46788888876 6799999877 6999999876666789999999999986 7999999987654 57889999999998


Q ss_pred             CCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhh--CCChH
Q 020294          133 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ--YGDST  203 (328)
Q Consensus       133 ~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~~  203 (328)
                      ++.       ...+++|+.|++||+.....  .++..               .+..+...  ...........  .....
T Consensus        92 ~~~~~~~~~~~~~~~l~~~la~LH~~~~~~--~~~~~---------------~~~~~~~~--~~~~~~~~~~~~~~~~~~  152 (255)
T d1nd4a_          92 DLLSSHLAPAEKVSIMADAMRRLHTLDPAT--CPFDH---------------QAKHRIER--ARTRMEAGLVDQDDLDEE  152 (255)
T ss_dssp             ETTTSCCCHHHHHHHHHHHHHHHTTSCGGG--CCCBC---------------CHHHHHHH--HHHHHHTTCCCTTSCCGG
T ss_pred             ccccccccHHHHHHHHHHHHHHHccCChhh--CCCcc---------------cchhhHHH--HHHHHHHhhhccccccch
Confidence            652       24689999999999987532  11110               11111110  00000000000  00110


Q ss_pred             -HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh---cCCC----hhh
Q 020294          204 -IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC---AGFG----GSF  274 (328)
Q Consensus       204 -~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~---~~~~----~~f  274 (328)
                       ......+....+...... ..+++|||||+|++|||+++++.++||||+ +++|||++||+++..   ..++    +.|
T Consensus       153 ~~~~~~~~~~~~l~~~~~~-~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~~~~Dla~~~~~~~~~~~~~~~~~~  231 (255)
T d1nd4a_         153 HQGLAPAELFARLKARMPD-GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRF  231 (255)
T ss_dssp             GTTCCHHHHHHHHHHTCCS-SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHhCCc-cCCceEEeCCCCCcceEEeCCceEEEEEchhcccCCHHHHHHHHHHHhhhcCCHHHHHHH
Confidence             000111122222222222 357799999999999999887777999985 679999999997632   2333    456


Q ss_pred             HHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          275 YNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       275 ~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      +++|....   .+ .+|+.+|+++
T Consensus       232 ~~~yg~~~---~d-~~r~~~y~ll  251 (255)
T d1nd4a_         232 LVLYGIAA---PD-SQRIAFYRLL  251 (255)
T ss_dssp             HHHHTCSS---CC-HHHHHHHHHH
T ss_pred             HHHcCCCC---CC-HHHHHHHHHH
Confidence            67775322   22 5788998765

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.89  E-value=8e-24  Score=186.09  Aligned_cols=226  Identities=14%  Similarity=0.121  Sum_probs=143.2

Q ss_pred             hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceec
Q 020294           38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKV  114 (328)
Q Consensus        38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~  114 (328)
                      .++.+++.+.    .+  +...+|+..+.+|++++++++||||+....   ....+.+|++++++|++  ++|||+++..
T Consensus         7 ~~l~~~~~~~----~~--~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~--~vpvP~vl~~   78 (263)
T d1j7la_           7 PELKKLIEKY----RC--VKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG--KLPVPKVLHF   78 (263)
T ss_dssp             HHHHHHHTTS----EE--EECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT--TSCCCCEEEE
T ss_pred             HHHHHhhhce----EE--EEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc--cCCCCcEEEE
Confidence            4466777533    22  222334445689999999999999998642   34457899999999976  5999999988


Q ss_pred             cccCCCceEEEEeeecCCCC-----C-----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH
Q 020294          115 GALPTGGSYIIMEFIEFGSS-----R-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA  184 (328)
Q Consensus       115 ~~~~~~~~~~v~e~l~G~~~-----~-----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~  184 (328)
                      +.. ++..++||++++|.+.     .     ....++|+.+++||+...+.  .+...            +...+..   
T Consensus        79 ~~~-~~~~~lv~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~~--~~~~~------------~~~~~~~---  140 (263)
T d1j7la_          79 ERH-DGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISD--CPYTN------------SLDSRLA---  140 (263)
T ss_dssp             EEE-TTEEEEEEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCTT--CSCBC------------CHHHHHH---
T ss_pred             Eec-CCceEEEEEecccccccccccccccHHHHHHHHHHHHHHHhccCccc--cccCc------------chhhhhh---
Confidence            654 5789999999999753     1     23578999999999987531  22110            0001100   


Q ss_pred             HhhhHHHHHHHHhh-----CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCc
Q 020294          185 EHRLGYQLKLALDQ-----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN  258 (328)
Q Consensus       185 ~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p  258 (328)
                        ............     ..........+++.+.+.+...  ..++++|||||+++|||+++++.++||||+ +++|+|
T Consensus       141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~  216 (263)
T d1j7la_         141 --ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP--EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADK  216 (263)
T ss_dssp             --HHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCC--CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEEH
T ss_pred             --hHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCC--cCCcEEEEeeccCcceeecCCceEEEeechhcccCCH
Confidence              011111000000     0000011123333443433333  356799999999999999987777999984 789999


Q ss_pred             hhhhhhhhh---cC-----CChhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294          259 EAEFGMSWC---AG-----FGGSFYNSYFEVMPKQPGFEKRRDLYMLY  298 (328)
Q Consensus       259 ~~DLa~~~~---~~-----~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~  298 (328)
                      .+||+.++.   ..     ..+.|+++|.    +..+ .+|+.+|+++
T Consensus       217 ~~Dla~~~~~~~~~~~~~~~~~~fl~~Yg----~~~d-~~~l~~y~~l  259 (263)
T d1j7la_         217 WYDIAFCVRSIREDIGEEQYVELFFDLLG----IKPD-WEKIKYYILL  259 (263)
T ss_dssp             HHHHHHHHHHHHHHCSCTHHHHHHHHHHT----SCCC-HHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccCCHHHHHHHHHHcC----CCCC-HHHHHHHHHH
Confidence            999997631   11     1246999996    2233 4688888764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=4.6e-23  Score=192.20  Aligned_cols=221  Identities=15%  Similarity=0.130  Sum_probs=138.6

Q ss_pred             hhhhhcCChhHHHHHHHhcCC--CcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHHH
Q 020294           29 TFAMAALSDDPIREWILSEGK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEA   94 (328)
Q Consensus        29 ~~~~~~~~~~~i~~~l~~~~~--~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~   94 (328)
                      .+.|..++++.+.++..+.|.  +....+++++|+|..|.+|+|++.++  ++|||.+++.          ..+....|+
T Consensus         2 ~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~   81 (392)
T d2pula1           2 TPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIES   81 (392)
T ss_dssp             CCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHH
Confidence            456788999999999988753  33556788999999999999987653  8999987641          224466799


Q ss_pred             HHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 020294           95 LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVD  163 (328)
Q Consensus        95 ~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~~  163 (328)
                      ++|+.++...+.+||+++.++.   ...+++|||++|...           .....++|+.|+++|......   +....
T Consensus        82 ~~L~~~~~~~p~~vP~v~~~d~---~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~---~~~~~  155 (392)
T d2pula1          82 SALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDY---ALEPK  155 (392)
T ss_dssp             HHHHHHHTTCGGGSCCEEEEET---TTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTT---TSCHH
T ss_pred             HHHHHhhhhCCCCcceEEEEcC---CCCEEEEeccCCcccchhhhcccchhHHHHHHHHHHHHHHHHHhccc---cccch
Confidence            9999999877788999999874   467999999998542           245788999999999876531   11100


Q ss_pred             Ccccc-cccCCCCcccHHHHHHH-------------hhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCcee
Q 020294          164 NTIGS-TPQINKWTSNWIEFYAE-------------HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLL  229 (328)
Q Consensus       164 ~~~g~-~~~~~~~~~~w~~~~~~-------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Li  229 (328)
                      ..... ....|.....|.+....             .......+...   .+.++...+.++    ...+.  ..+.+||
T Consensus       156 ~~~~~~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l~---~d~~l~~~~~~l----~~~~~--~~~~~Li  226 (392)
T d2pula1         156 VKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLW---NNDSVKIEAAKL----KKSFL--TSAETLI  226 (392)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHH---TCHHHHHHHHHH----HHHHH--HBCCEEE
T ss_pred             hhcccccccccHHHHHHHHhhhcchHHHHHHHhhcchhhhHHHHhhh---hhHHHHHHHHHH----Hhhcc--cCCccee
Confidence            00000 00011111111100000             00000000000   111112222222    22222  2467999


Q ss_pred             ccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294          230 HGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS  265 (328)
Q Consensus       230 HgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~  265 (328)
                      |||||++|||+++++ ++||||+ +.+|+|.+||+.+
T Consensus       227 HGDl~~gNIlv~~~~-~~vID~E~a~~G~~~~Dlg~~  262 (392)
T d2pula1         227 HGDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQF  262 (392)
T ss_dssp             CSCCCGGGEEECSSC-EEECCCTTCEEECTHHHHHHH
T ss_pred             ccCCcCCceeEcCCc-eEEechhhcccCCHHHHHHHH
Confidence            999999999998765 8999995 7899999999965

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.77  E-value=8.1e-18  Score=156.46  Aligned_cols=198  Identities=16%  Similarity=0.105  Sum_probs=129.8

Q ss_pred             HHHHHHHhc-C-----CCcceeeeeeeCCcccceeEEEEeCCc---------cEEEEecCCC-CcchHHHHHHHHHHHHh
Q 020294           39 PIREWILSE-G-----KATHITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSI-GPSMFEGEALGLGAMYE  102 (328)
Q Consensus        39 ~i~~~l~~~-~-----~~~~i~~v~~i~~G~~n~~y~v~~~~~---------~~vlK~~~~~-~~~~~~~E~~~l~~L~~  102 (328)
                      .+++++++. +     ...+-.++++++||.+|.+|+|+.+++         ++++|++... .......|..+++.|++
T Consensus        24 ~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~  103 (395)
T d1nw1a_          24 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSE  103 (395)
T ss_dssp             HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHh
Confidence            345556553 2     233567899999999999999997642         5899998742 22335689999999998


Q ss_pred             cCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294          103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  175 (328)
Q Consensus       103 ~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~  175 (328)
                      . ++ +|++++.+.     .++|++|++|..+.       .....+++.|+++|....+.  ..  ...           
T Consensus       104 ~-gl-~Pkll~~~~-----~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~--~~--~~~-----------  161 (395)
T d1nw1a_         104 R-HL-GPKLYGIFS-----GGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPI--WK--EPD-----------  161 (395)
T ss_dssp             T-TS-SSCEEEEET-----TEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSS--CC--SSC-----------
T ss_pred             C-CC-CCeEEEEcC-----CceEEEEeccccCChhhccchhhhHHHHHHHHHHhhccccc--cc--Ccc-----------
Confidence            6 55 899999874     38999999997653       34689999999999987531  11  000           


Q ss_pred             cccHHHHHHHhhhHHHHHHHHhh-------------CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC
Q 020294          176 TSNWIEFYAEHRLGYQLKLALDQ-------------YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK  242 (328)
Q Consensus       176 ~~~w~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~  242 (328)
                       ..|      ..+..+++.....             .........+.+.++.+...+.....+.++||+||+++|||+.+
T Consensus       162 -~~~------~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~  234 (395)
T d1nw1a_         162 -YLC------EALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK  234 (395)
T ss_dssp             -HHH------HHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC
T ss_pred             -hHH------HHHHHHHHhhhhhhhHHHhhhhhhhhccccccHHHHHHHHHHHHHHhhcccCCeeEEecCCCcccEeecc
Confidence             001      1122222211110             00100112233334444545554456789999999999999853


Q ss_pred             ----------------------------CCCeEEEcc-ccccCCchhhhhhh
Q 020294          243 ----------------------------NGEPVILDP-ACYYGHNEAEFGMS  265 (328)
Q Consensus       243 ----------------------------~~~~~iID~-~~~~G~p~~DLa~~  265 (328)
                                                  ++.+.+||| .+++|++.+|||..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~  286 (395)
T d1nw1a_         235 ASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANH  286 (395)
T ss_dssp             ------------------------------CCEECCCTTCEEEEHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCCCCcEEEEeecccCCCcchhhHHHH
Confidence                                        345789998 58999999999954

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.80  E-value=1.3e-08  Score=83.68  Aligned_cols=69  Identities=16%  Similarity=0.142  Sum_probs=46.9

Q ss_pred             eeeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------cchHHHHHHHHHHHHhcCCCCcccceec
Q 020294           57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------PSMFEGEALGLGAMYETRTIRAPRPFKV  114 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------~~~~~~E~~~l~~L~~~~~v~VP~~~~~  114 (328)
                      +.||.|..+.||+....+| .+++|+.+...                     ......|+..+..+.   ++++|.++..
T Consensus         6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~v~~~~~~   82 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---GLAVPKVYAW   82 (191)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---TSSSCCEEEE
T ss_pred             CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc---CCCcceEEEe
Confidence            4578999999999987665 89999864210                     011234555555553   5789988876


Q ss_pred             cccCCCceEEEEeeecCCC
Q 020294          115 GALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       115 ~~~~~~~~~~v~e~l~G~~  133 (328)
                      .     ..+++||+++|..
T Consensus        83 ~-----~~~lvme~~~~~~   96 (191)
T d1zara2          83 E-----GNAVLMELIDAKE   96 (191)
T ss_dssp             E-----TTEEEEECCCCEE
T ss_pred             c-----CCEEEEEeecccc
Confidence            5     3489999999853

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=3e-08  Score=87.19  Aligned_cols=93  Identities=15%  Similarity=0.130  Sum_probs=63.3

Q ss_pred             hhHHHHHHHhc-CCC---cceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCC
Q 020294           37 DDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIR  107 (328)
Q Consensus        37 ~~~i~~~l~~~-~~~---~~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~  107 (328)
                      ++++.+-+++. ..+   ..-.-++.+|.|..+.||++... +| .+.+|+...   ...+.+.+|+++++.+.+   -.
T Consensus         2 d~~~~~~l~~~~~~~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H---pn   78 (293)
T d1yhwa1           2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PN   78 (293)
T ss_dssp             HHHHHHHHHHHSBSSCTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC---TT
T ss_pred             hHHHHHHHhccCCCCCcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCC---CC
Confidence            45555555543 111   12344678999999999999753 34 788997642   234568899999988854   24


Q ss_pred             cccceeccccCCCceEEEEeeecCCC
Q 020294          108 APRPFKVGALPTGGSYIIMEFIEFGS  133 (328)
Q Consensus       108 VP~~~~~~~~~~~~~~~v~e~l~G~~  133 (328)
                      +.+++..... ++..|+||||++|+.
T Consensus        79 Iv~~~~~~~~-~~~~~ivmEy~~gg~  103 (293)
T d1yhwa1          79 IVNYLDSYLV-GDELWVVMEYLAGGS  103 (293)
T ss_dssp             BCCEEEEEEE-TTEEEEEEECCTTCB
T ss_pred             EeeEeEEEEE-CCEEEEEEEecCCCc
Confidence            6666665443 467899999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.67  E-value=1e-07  Score=83.01  Aligned_cols=134  Identities=13%  Similarity=0.057  Sum_probs=85.8

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      .+.||.|..+.||++... ++ .|.+|+.+..   .         .+.+.+|+.+++.|..+  -.+.+++....+ ++.
T Consensus         8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-~~~   84 (277)
T d1phka_           8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--PNIIQLKDTYET-NTF   84 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSE
T ss_pred             ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEEeeccc-Ccc
Confidence            667899999999999863 44 6778976421   1         12466799999999754  246677766543 568


Q ss_pred             eEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC
Q 020294          122 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD  201 (328)
Q Consensus       122 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~  201 (328)
                      .|+||||++|+++       -+.|   +....    +.                 .+        ...            
T Consensus        85 ~~ivmE~~~~g~L-------~~~l---~~~~~----l~-----------------e~--------~~~------------  113 (277)
T d1phka_          85 FFLVFDLMKKGEL-------FDYL---TEKVT----LS-----------------EK--------ETR------------  113 (277)
T ss_dssp             EEEEEECCTTCBH-------HHHH---HHHSS----CC-----------------HH--------HHH------------
T ss_pred             eEEEEEcCCCchH-------HHHH---HhcCC----CC-----------------HH--------HHH------------
Confidence            8999999999853       1222   11111    00                 00        011            


Q ss_pred             hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       202 ~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                          ..+.++++.+..+-     ...++|+|++|.|||+++++...|+|+.
T Consensus       114 ----~~~~qi~~al~~lH-----~~~ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_         114 ----KIMRALLEVICALH-----KLNIVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             ----HHHHHHHHHHHHHH-----HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             ----HHHHHHHHHHHHHH-----HcCCcccccccceEEEcCCCCeEEccch
Confidence                11223333333222     2369999999999999988888999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=6.1e-08  Score=83.77  Aligned_cols=133  Identities=17%  Similarity=0.123  Sum_probs=85.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.+|.|..+.||++... ++ .+.+|+...      .....+.+|+++++.+.+   -.+.+++.+... ++..|+|||
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~ivmE   86 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH---PNILRLYGYFHD-ATRVYLILE   86 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC---CCCCeEEEEEEE-CCEEEEEEe
Confidence            467899999999999874 34 688897531      234557788988887743   246667766544 568899999


Q ss_pred             eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294          128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  207 (328)
Q Consensus       128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  207 (328)
                      |++|+.+       .+.   +.....    +.                   +      ..+.                ..
T Consensus        87 y~~~g~L-------~~~---l~~~~~----l~-------------------e------~~~~----------------~i  111 (263)
T d2j4za1          87 YAPLGTV-------YRE---LQKLSK----FD-------------------E------QRTA----------------TY  111 (263)
T ss_dssp             CCTTCBH-------HHH---HHHHSS----CC-------------------H------HHHH----------------HH
T ss_pred             ecCCCcH-------HHH---HhhcCC----CC-------------------H------HHHH----------------HH
Confidence            9999853       111   222111    00                   0      0011                11


Q ss_pred             HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294          208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  252 (328)
Q Consensus       208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~  252 (328)
                      +.++++.+..+-     ...++|+|++|+|||+++++...|+||.
T Consensus       112 ~~qi~~al~~lH-----~~~ivHrDiKp~Nill~~~~~~kl~DFG  151 (263)
T d2j4za1         112 ITELANALSYCH-----SKRVIHRDIKPENLLLGSAGELKIADFG  151 (263)
T ss_dssp             HHHHHHHHHHHH-----HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             HHHHHHHHHHHH-----HCCeeeeeeccccceecCCCCEeecccc
Confidence            222333333222     2369999999999999988888999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.6e-08  Score=83.94  Aligned_cols=74  Identities=14%  Similarity=0.066  Sum_probs=54.8

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.+|.|..+.||++... ++ .+.+|+....   ....+.+|+++++.|.+   -.|.+++.+... ++..++||||++
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~lvmEy~~   92 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH---PNIVKLLDAFYY-ENNLWILIEFCA   92 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCeEEEEEecCC
Confidence            567999999999999863 34 6788986532   23567889999988853   246666665443 568899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus        93 ~g~   95 (288)
T d2jfla1          93 GGA   95 (288)
T ss_dssp             TEE
T ss_pred             CCc
Confidence            985

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.1e-07  Score=82.39  Aligned_cols=75  Identities=12%  Similarity=0.046  Sum_probs=53.3

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      ++.+|.|..+.||++... ++ .+.+|+...    .....+.+|+++++.|.+   -.+.+++..... ++..|+||||+
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~~~~~~~~-~~~~~ivmEy~   85 (271)
T d1nvra_          10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFLEYC   85 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEECC
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCC---CCEeeEeeeecc-CceeEEEEecc
Confidence            567899999999999863 34 788898642    123557889998887753   246666665443 46789999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+++
T Consensus        86 ~gg~L   90 (271)
T d1nvra_          86 SGGEL   90 (271)
T ss_dssp             TTEEG
T ss_pred             CCCcH
Confidence            99764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.5e-07  Score=82.33  Aligned_cols=74  Identities=8%  Similarity=-0.045  Sum_probs=53.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.+|.|..+.||++... ++ .|.+|+...      .....+..|+++++.|.+   -.+.+++..... ++..|+|||
T Consensus        13 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~ivmE   88 (288)
T d1uu3a_          13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH---PFFVKLYFTFQD-DEKLYFGLS   88 (288)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC---CCeeEEEEEEEE-CCEEEEEEE
Confidence            466899999999999763 44 788998532      234567889999888854   245566665443 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        89 y~~gg~   94 (288)
T d1uu3a_          89 YAKNGE   94 (288)
T ss_dssp             CCTTEE
T ss_pred             ccCCCC
Confidence            999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.7e-07  Score=81.29  Aligned_cols=77  Identities=23%  Similarity=0.229  Sum_probs=57.3

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-.+.||.|..+.||+....++ .+.+|.....  ..+.+.+|+++++.+.+   -.+.+++....  ++..++||||
T Consensus        14 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~--~~~~~iv~Ey   88 (272)
T d1qpca_          14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH---QRLVRLYAVVT--QEPIYIITEY   88 (272)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEEEC
T ss_pred             HeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCC---CCEeEEEeeec--cCCeEEEEEe
Confidence            344467799999999999988665 6778987542  34568899999998853   24556666543  4567999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        89 ~~~g~   93 (272)
T d1qpca_          89 MENGS   93 (272)
T ss_dssp             CTTCB
T ss_pred             CCCCc
Confidence            99986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=2.2e-07  Score=81.22  Aligned_cols=78  Identities=23%  Similarity=0.175  Sum_probs=56.2

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ...-.+.+|.|..+.||+.... ++ .+.+|.....  ..+.+.+|+++++.|.+   -.+-+++..... .+..+++||
T Consensus        18 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~iv~E   93 (287)
T d1opja_          18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITE   93 (287)
T ss_dssp             GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEE
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCC---CCEecCCccEee-CCeeEEEee
Confidence            3444677999999999998764 34 6778986542  34567889999988853   245566665443 467899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        94 ~~~~g~   99 (287)
T d1opja_          94 FMTYGN   99 (287)
T ss_dssp             CCTTCB
T ss_pred             cccCcc
Confidence            999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=6.3e-08  Score=83.95  Aligned_cols=75  Identities=19%  Similarity=0.173  Sum_probs=49.1

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... +| .+.+|......     ...+.+|+++++.|.+   -.+.+++...... ++..|+|||
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH---PNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC---TTBCCEEEEEEC----CEEEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC---CCEeeEEEEEEeCCCCEEEEEEe
Confidence            567899999999999763 45 68889765321     2346677777666643   2355555543221 356799999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|++
T Consensus        86 y~~~g~   91 (269)
T d2java1          86 YCEGGD   91 (269)
T ss_dssp             CCTTEE
T ss_pred             cCCCCc
Confidence            999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.53  E-value=2.5e-07  Score=81.98  Aligned_cols=74  Identities=18%  Similarity=0.177  Sum_probs=53.8

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.||.|..+.||++... +| .|.+|+...      .....+..|+.+++.+.+   -.+.+++..... ++..|+|||
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE   84 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH---PFIIRMWGTFQD-AQQIFMIMD   84 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC---cChhheeeeEee-CCeeeeEee
Confidence            567899999999999864 34 788998642      224557788888887743   245666665543 568899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus        85 ~~~gg~   90 (316)
T d1fota_          85 YIEGGE   90 (316)
T ss_dssp             CCCSCB
T ss_pred             ecCCcc
Confidence            999974

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.52  E-value=2.5e-07  Score=82.16  Aligned_cols=79  Identities=10%  Similarity=0.001  Sum_probs=58.6

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeec
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE  130 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~  130 (328)
                      .-++.+|.|..+.||++... ++ .+.+|+-.......+.+|+++|+.+..+  -.+.+++...... ....++||||++
T Consensus        38 ~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~h--pnIv~~~~~~~~~~~~~~~~v~e~~~  115 (328)
T d3bqca1          38 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG--PNIITLADIVKDPVSRTPALVFEHVN  115 (328)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTS--TTBCCEEEEEECTTTCSEEEEEECCC
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCC--CCCcEEEEEEEecCCCceeEEEeecC
Confidence            34677999999999999863 44 6788987655556788999999999754  2466777654322 356899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       116 ~~~L  119 (328)
T d3bqca1         116 NTDF  119 (328)
T ss_dssp             SCBG
T ss_pred             CCcH
Confidence            8753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.49  E-value=2.8e-07  Score=82.91  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.||.|..+.||++... +| .+.+|+.....   ...+..|+.+|+.|.+   -.+.+++..... ++..|+||||++
T Consensus        34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE~~~  109 (352)
T d1koba_          34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH---PKLINLHDAFED-KYEMVLILEFLS  109 (352)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS---TTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEEcCC
Confidence            567899999999999753 44 78889865422   3456678888877743   245566655443 467899999999


Q ss_pred             CCC
Q 020294          131 FGS  133 (328)
Q Consensus       131 G~~  133 (328)
                      |+.
T Consensus       110 gg~  112 (352)
T d1koba_         110 GGE  112 (352)
T ss_dssp             CCB
T ss_pred             CCh
Confidence            985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.6e-07  Score=81.13  Aligned_cols=75  Identities=15%  Similarity=0.076  Sum_probs=55.5

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .+.+|.|..+.||++... ++ .|.+|+.....  ...+.+|+++|+.+.+   -.+.+++..... ++..|+||||++|
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~lvmE~~~g   85 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH---RNILHLHESFES-MEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC---TTBCCEEEEEEE-TTEEEEEECCCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEEecCCC
Confidence            467899999999998764 44 79999876432  3457789999888754   346667665443 5688999999999


Q ss_pred             CCC
Q 020294          132 GSS  134 (328)
Q Consensus       132 ~~~  134 (328)
                      +.+
T Consensus        86 g~L   88 (321)
T d1tkia_          86 LDI   88 (321)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.44  E-value=5.5e-07  Score=80.88  Aligned_cols=75  Identities=15%  Similarity=0.110  Sum_probs=55.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  130 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~  130 (328)
                      ++.+|.|..+.||++... +| .+++|......   ...+.+|+.+|+.|.+   -.+.+++..... ++..++||||++
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE~~~  106 (350)
T d1koaa2          31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH---PTLVNLHDAFED-DNEMVMIYEFMS  106 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCC---TTBCCEEEEEEE-TTEEEEEECCCC
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEEcCC
Confidence            567899999999999863 44 78899875422   3557789999988853   246666765443 578899999999


Q ss_pred             CCCC
Q 020294          131 FGSS  134 (328)
Q Consensus       131 G~~~  134 (328)
                      |+.+
T Consensus       107 gg~L  110 (350)
T d1koaa2         107 GGEL  110 (350)
T ss_dssp             SCBH
T ss_pred             CCCH
Confidence            9853

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=1.5e-07  Score=83.65  Aligned_cols=77  Identities=18%  Similarity=0.040  Sum_probs=53.5

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .-++.+|.|..+.||++... +| .+.+|.....    ....+.+|+.+|+.|.+   -.+.+++..... ++..++|||
T Consensus         9 ~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~-~~~~~iVmE   84 (322)
T d1s9ja_           9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICME   84 (322)
T ss_dssp             EEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEE
Confidence            34678999999999999863 44 6778876432    13456778888877743   245556655443 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        85 y~~gg~L   91 (322)
T d1s9ja_          85 HMDGGSL   91 (322)
T ss_dssp             CCTTEEH
T ss_pred             cCCCCcH
Confidence            9999753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.7e-07  Score=77.36  Aligned_cols=78  Identities=19%  Similarity=0.144  Sum_probs=58.0

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      ...-++.||.|..+.||+....++ .+.+|.-...  ....+.+|++.++.+.+   -.+-+++.+... ++..++||||
T Consensus         6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~-~~~~~lv~E~   81 (263)
T d1sm2a_           6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVFEF   81 (263)
T ss_dssp             CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEEC
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCC---CCcccccceecc-CCceEEEEEe
Confidence            344567899999999999987655 6888986542  34567889999888854   346667766543 4678999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++++.
T Consensus        82 ~~~g~   86 (263)
T d1sm2a_          82 MEHGC   86 (263)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.43  E-value=6.4e-07  Score=80.85  Aligned_cols=78  Identities=12%  Similarity=0.014  Sum_probs=51.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.||.|..+.||++... +| .|.+|+...      .....+..|...++.+.....-.+.+++..... .+..|+|||
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~-~~~~~ivmE   87 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILD   87 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE-CCEEEEEEE
Confidence            456899999999999864 34 788897532      223445567666777764322234455554433 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        88 ~~~gg~L   94 (364)
T d1omwa3          88 LMNGGDL   94 (364)
T ss_dssp             CCCSCBH
T ss_pred             ecCCCcH
Confidence            9999853

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.41  E-value=2.6e-07  Score=81.63  Aligned_cols=77  Identities=10%  Similarity=0.001  Sum_probs=52.8

Q ss_pred             eeeeeeeCCcccceeEEEEe-CCc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           53 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      -..++.+|.|..+.||++.. .++ .+.+|.-....      ...+.+|+++++.|.+   -.+-+++.+... ++..++
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~i   92 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH---PNTIQYRGCYLR-EHTAWL   92 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC---CCEeeEEEEEEE-CCEEEE
Confidence            45678899999999999975 345 57788764321      1346678888777743   234455554333 467899


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|+.
T Consensus        93 v~E~~~~g~  101 (309)
T d1u5ra_          93 VMEYCLGSA  101 (309)
T ss_dssp             EEECCSEEH
T ss_pred             EEEecCCCc
Confidence            999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.3e-07  Score=80.58  Aligned_cols=73  Identities=15%  Similarity=0.040  Sum_probs=51.9

Q ss_pred             eeeeeCCcccceeEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           55 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      =.+.+|.|....||+.+.. +.+.+|.....     ....+.+|+++++.+.+   -.+-+.+.+..  ++..++||||+
T Consensus        12 ~~~~lG~G~fg~Vy~~~~~-~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~~~~~--~~~~~lv~Ey~   85 (276)
T d1uwha_          12 VGQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH---VNILLFMGYST--APQLAIVTQWC   85 (276)
T ss_dssp             CCSEEEECSSCEEEEEESS-SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEEECC
T ss_pred             EEEEEeeCCCcEEEEEEEC-CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeeeeEEEe--ccEEEEEEecC
Confidence            3567899999999999754 46888986531     13456788988887743   23445665543  45679999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|++
T Consensus        86 ~~g~   89 (276)
T d1uwha_          86 EGSS   89 (276)
T ss_dssp             CEEE
T ss_pred             CCCC
Confidence            9975

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=5e-07  Score=80.71  Aligned_cols=75  Identities=13%  Similarity=-0.006  Sum_probs=53.3

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      ++.+|.|..+.||++... ++ .|.+|+-..      .....+..|..+|+.+.+   -.+.+++..... .+..|+|||
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~iv~e   85 (337)
T d1o6la_          10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVME   85 (337)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC---CCEEEEEeeecc-cccccccee
Confidence            567899999999999863 34 788898642      223556678888877743   246666655443 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        86 y~~gg~L   92 (337)
T d1o6la_          86 YANGGEL   92 (337)
T ss_dssp             CCTTCBH
T ss_pred             ccCCCch
Confidence            9999853

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=7.7e-07  Score=77.56  Aligned_cols=77  Identities=19%  Similarity=0.250  Sum_probs=57.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .+.-.+.+|.|....||+....++ .+.+|.-...  ..+.+..|+.+++.+.+.   .+.+++....  ++..++||||
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~g~~~--~~~~~lv~Ey   92 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE---KLVQLYAVVS--EEPIYIVTEY   92 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCT---TBCCEEEEEC--SSSCEEEECC
T ss_pred             HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccC---CEeEEEEEEe--cCCeEEEEEe
Confidence            445567799999999999988665 6778986542  345688999999888653   4666776543  4568999999


Q ss_pred             ecCCC
Q 020294          129 IEFGS  133 (328)
Q Consensus       129 l~G~~  133 (328)
                      ++|+.
T Consensus        93 ~~~g~   97 (285)
T d1fmka3          93 MSKGS   97 (285)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.3e-06  Score=76.47  Aligned_cols=74  Identities=11%  Similarity=-0.003  Sum_probs=52.4

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .++.||.|..+.||++... +| .+.+|+-...        ....+.+|+.+++.+.+   -.+.+++..... ++..++
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h---pnIv~~~~~~~~-~~~~~i   77 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH---PNIIGLLDAFGH-KSNISL   77 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC---TTBCCEEEEECC-TTCCEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC---CCEeEEEeeecc-CCceee
Confidence            4678999999999999863 34 6888976421        12457789999988854   245666655443 467899


Q ss_pred             EEeeecCC
Q 020294          125 IMEFIEFG  132 (328)
Q Consensus       125 v~e~l~G~  132 (328)
                      ||||++|+
T Consensus        78 vmE~~~~~   85 (299)
T d1ua2a_          78 VFDFMETD   85 (299)
T ss_dssp             EEECCSEE
T ss_pred             hhhhhcch
Confidence            99999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.37  E-value=1.7e-06  Score=75.42  Aligned_cols=73  Identities=8%  Similarity=0.055  Sum_probs=55.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  131 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G  131 (328)
                      .+.||.|..+.||++... ++ .+.+|+.+. .....+..|++.++.|.+.  -.+|.++..+.. .+..++|||++.|
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~~vme~~~~   85 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQE-GLHNVLVIDLLGP   85 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEE-TTEEEEEEECCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCC--CCCCEEEEEeec-CCccEEEEEecCC
Confidence            467899999999999854 34 688898643 3345678899999999764  357778877654 5688999999854

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.3e-06  Score=76.71  Aligned_cols=81  Identities=16%  Similarity=0.030  Sum_probs=47.9

Q ss_pred             eeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCC---CceEEEEeee
Q 020294           53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFI  129 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~~~~v~e~l  129 (328)
                      ++=-+.||.|....||+.+..+..+.+|............|.+++... ....-.+-+++.......   ...++||||+
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~-~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV-MLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTST-TCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHh-hCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            333466899999999999877668999987643333333444433211 110112333444433211   2468999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +++.+
T Consensus        84 ~~g~L   88 (303)
T d1vjya_          84 EHGSL   88 (303)
T ss_dssp             TTCBH
T ss_pred             cCCCH
Confidence            99764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.35  E-value=7.6e-07  Score=78.45  Aligned_cols=75  Identities=15%  Similarity=0.046  Sum_probs=51.6

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .+.+|.|..+.||++... ++ .|.+|+...    .....+..|+.+|+.|.+   -.+.+++.+... ++..|+||||+
T Consensus        14 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~-~~~~~lvmE~~   89 (307)
T d1a06a_          14 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH---PNIVALDDIYES-GGHLYLIMQLV   89 (307)
T ss_dssp             EEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEECCC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEecc
Confidence            456899999999999864 34 688898642    123456689988887743   246667765543 56889999999


Q ss_pred             cCCCC
Q 020294          130 EFGSS  134 (328)
Q Consensus       130 ~G~~~  134 (328)
                      +|+++
T Consensus        90 ~gg~L   94 (307)
T d1a06a_          90 SGGEL   94 (307)
T ss_dssp             CSCBH
T ss_pred             CCCcH
Confidence            99753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=2.2e-06  Score=75.97  Aligned_cols=79  Identities=14%  Similarity=0.126  Sum_probs=54.2

Q ss_pred             eeeeeeeCCcccceeEEEEeCC-c------cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGTDA-G------SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~-~------~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..=.+.+|.|..+.||+.+... +      .+.+|....    .....+..|..++..+.++  -.+.+++..... .+.
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~H--pnIv~l~~~~~~-~~~  115 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--ENIVNLLGACTL-SGP  115 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SSS
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCC--CcEeEEEEEEee-CCe
Confidence            3445678999999999987521 1      356676542    2245577899999888543  246667766543 467


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+.+
T Consensus       116 ~~lv~Ey~~~g~L  128 (325)
T d1rjba_         116 IYLIFEYCCYGDL  128 (325)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            8999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=8.3e-07  Score=76.81  Aligned_cols=75  Identities=19%  Similarity=0.092  Sum_probs=50.1

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~  124 (328)
                      .+.+|.|..+.||+.... ++ .+.+|+-...   .   ...+.+|+++++.+.+   -.+.+++......   .+..|+
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h---pniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_          12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH---PAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC---CCCCcccceeeeccCCCceEEE
Confidence            467899999999999853 44 7889986532   1   2346678887776643   2455555543321   235789


Q ss_pred             EEeeecCCC
Q 020294          125 IMEFIEFGS  133 (328)
Q Consensus       125 v~e~l~G~~  133 (328)
                      ||||++|+.
T Consensus        89 vmE~~~g~~   97 (277)
T d1o6ya_          89 VMEYVDGVT   97 (277)
T ss_dssp             EEECCCEEE
T ss_pred             EEECCCCCE
Confidence            999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=2.3e-06  Score=74.95  Aligned_cols=78  Identities=23%  Similarity=0.126  Sum_probs=51.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ...-.+.+|.|....||+.... ++    .+.+|..... .   ...+.+|+++|+.|.+   -.+.+++.+... .+..
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~-~~~~  102 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNVIHLEGVVTK-STPV  102 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSC
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC---CCCccEEEEEee-CCEE
Confidence            3444567899999999998753 22    2445654432 1   2346788888877743   245566666543 4678


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      ++||||++|+.
T Consensus       103 ~iv~Ey~~~g~  113 (299)
T d1jpaa_         103 MIITEFMENGS  113 (299)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEecCCCc
Confidence            99999999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=9.3e-07  Score=79.32  Aligned_cols=77  Identities=16%  Similarity=0.056  Sum_probs=53.0

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  125 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v  125 (328)
                      .-++.||.|..+.||++... +| .|.+|+...      .....+..|+.+|+.+.+   -.+.+++..... .+..+++
T Consensus        44 ~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~~v  119 (350)
T d1rdqe_          44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF---PFLVKLEFSFKD-NSNLYMV  119 (350)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC---CcEeeccccccc-ccccccc
Confidence            44678999999999999763 44 788897532      223446678888776643   235555554433 4678999


Q ss_pred             EeeecCCCC
Q 020294          126 MEFIEFGSS  134 (328)
Q Consensus       126 ~e~l~G~~~  134 (328)
                      ||+++|+.+
T Consensus       120 ~e~~~~g~l  128 (350)
T d1rdqe_         120 MEYVAGGEM  128 (350)
T ss_dssp             EECCTTCBH
T ss_pred             cccccccch
Confidence            999999853

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.4e-06  Score=76.25  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=53.3

Q ss_pred             eeeeeCCcccceeEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.+|.|..+.||++.. .++ .+.+|+....     ....+.+|+++++.+.+   -.+.+++..-.. .+..++|||
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H---p~Iv~~~~~~~~-~~~~~iv~e   81 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE   81 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEEE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC---CcEEEecccccc-ccceeEEEe
Confidence            467899999999999986 344 6778986431     24567789998887753   356667765543 467899999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      ++.|.
T Consensus        82 ~~~~~   86 (298)
T d1gz8a_          82 FLHQD   86 (298)
T ss_dssp             CCSEE
T ss_pred             ecCCc
Confidence            99875

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.29  E-value=1.2e-06  Score=75.98  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=53.5

Q ss_pred             eeeeeCCcccceeEEEEeCCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           55 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      -++.||.|..+.||++...++ .|.+|.....     ....+.+|+.+|+.+.+   -.+.+++..... ++..+++|++
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~i~~e~   81 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH---SNIVKLYDVIHT-KKRLVLVFEH   81 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC---TTBCCEEEEEEC-SSCEEEEEEC
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC---CcEEeeeeeccc-CCceeEEEEe
Confidence            467899999999999987655 7889986532     23557788888887753   245566654433 5678999999


Q ss_pred             ecCC
Q 020294          129 IEFG  132 (328)
Q Consensus       129 l~G~  132 (328)
                      ..|.
T Consensus        82 ~~~~   85 (286)
T d1ob3a_          82 LDQD   85 (286)
T ss_dssp             CSEE
T ss_pred             ehhh
Confidence            8875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1e-06  Score=76.16  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=49.9

Q ss_pred             eeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC---CCceEEEE
Q 020294           57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIM  126 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---~~~~~~v~  126 (328)
                      +.+|.|..+.||+.... ++ .+.+|.....     ....+.+|+++++.|.+   -.+.+++......   ....++||
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEeeccccCCEEEEEE
Confidence            35899999999998764 34 5677765321     13456788888877753   2466666543221   23568999


Q ss_pred             eeecCCCC
Q 020294          127 EFIEFGSS  134 (328)
Q Consensus       127 e~l~G~~~  134 (328)
                      ||++|+.+
T Consensus        92 E~~~~g~L   99 (270)
T d1t4ha_          92 ELMTSGTL   99 (270)
T ss_dssp             ECCCSCBH
T ss_pred             eCCCCCcH
Confidence            99999853

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.4e-06  Score=74.87  Aligned_cols=76  Identities=20%  Similarity=0.180  Sum_probs=54.3

Q ss_pred             eeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294           56 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  134 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~  134 (328)
                      ++.+|.|..+.||+....+..+.+|.-... ..+.+.+|+++++.+.+   -.+-+++.+.....+..++||||++|+.+
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~~~~~~~lv~ey~~~g~L   88 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMAKGSL   88 (262)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC---TTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             eEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence            566899999999999987678999988643 34667889988877742   24666666543223567999999999853

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.2e-06  Score=75.42  Aligned_cols=79  Identities=8%  Similarity=-0.064  Sum_probs=47.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceecccc---CCCce
Q 020294           52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGS  122 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~  122 (328)
                      .-.-++.+|.|..+.||++... +| .+.+|+-....    ...+.+|+++|+.|.+.   .+.+++.....   .....
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp---~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE---NIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCT---TBCCCCEEECCSSTTTCCC
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCC---CCCcEEEEEeeccccccce
Confidence            3455788999999999999753 45 67789765322    23466899999999653   23344433221   12345


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++++++.|+.
T Consensus        86 ~~l~~~~~~g~   96 (345)
T d1pmea_          86 VYLVTHLMGAD   96 (345)
T ss_dssp             EEEEEECCCEE
T ss_pred             EEEEEeecCCc
Confidence            66677777764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.4e-06  Score=74.78  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             eeeeCCcccceeEEEEeCCc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGTDAG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      ++.+|.|..+.||+....++ .+.+|.-+.  ...+.+.+|+..++.+.+   -.+-+++..... ++..++||||++++
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~H---pnIv~~~g~~~~-~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH---EKLVQLYGVCTK-QRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCC---TTBCCEEEEECC-SSSEEEEEECCTTE
T ss_pred             eEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCC---CceeeEEEEEee-CCceEEEEEccCCC
Confidence            45689999999999998766 677888653  234667889988887743   246666665443 46789999999987


Q ss_pred             C
Q 020294          133 S  133 (328)
Q Consensus       133 ~  133 (328)
                      .
T Consensus        85 ~   85 (258)
T d1k2pa_          85 C   85 (258)
T ss_dssp             E
T ss_pred             c
Confidence            5

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.8e-06  Score=74.00  Aligned_cols=75  Identities=15%  Similarity=0.116  Sum_probs=54.8

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC----C-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS----I-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~----~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||++... +| .|.+|+...    .     ....+.+|+++|+.|.+   -.+.+++.+... .+..++
T Consensus        15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~i   90 (293)
T d1jksa_          15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---PNVITLHEVYEN-KTDVIL   90 (293)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEE
Confidence            467899999999999863 44 788897531    1     13457889999998854   246677766543 467899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      ||||++|+.+
T Consensus        91 v~E~~~gg~L  100 (293)
T d1jksa_          91 ILELVAGGEL  100 (293)
T ss_dssp             EEECCCSCBH
T ss_pred             EEEcCCCccc
Confidence            9999999853

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.8e-05  Score=69.50  Aligned_cols=74  Identities=15%  Similarity=0.181  Sum_probs=49.4

Q ss_pred             eeeCCcccceeEEEEeCC--c---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           57 CPVGGGCINLASRYGTDA--G---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        57 ~~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      +.+|.|..+.||+....+  +   .+.+|..... .   ...+..|+++++.|.+   -.+-+++.+....++..++|||
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCC---TTBCCCCEEEEETTTEEEEEEE
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC---CCEeEEeEEEEecCCceEEEEE
Confidence            357999999999987532  2   2556765432 1   2457788888887743   3455566554333567899999


Q ss_pred             eecCCC
Q 020294          128 FIEFGS  133 (328)
Q Consensus       128 ~l~G~~  133 (328)
                      |++|+.
T Consensus       110 ~~~~g~  115 (311)
T d1r0pa_         110 YMKHGD  115 (311)
T ss_dssp             CCTTCB
T ss_pred             EeecCc
Confidence            999975

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.1e-06  Score=73.24  Aligned_cols=72  Identities=15%  Similarity=0.115  Sum_probs=49.5

Q ss_pred             eeCCcccceeEEEEeCC---c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294           58 PVGGGCINLASRYGTDA---G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  128 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~---~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~  128 (328)
                      .||.|....||+....+   + .+.+|+-...  .   ...+.+|+++++.|.+   -.+.+++.+..  ++..++||||
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~g~~~--~~~~~lvmE~   88 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVMEM   88 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC---TTBCCEEEEEE--SSSEEEEEEC
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC---CCCceEEEEec--cCCEEEEEEc
Confidence            59999999999986432   2 5778876532  1   2457789988887743   24556666543  3567999999


Q ss_pred             ecCCCC
Q 020294          129 IEFGSS  134 (328)
Q Consensus       129 l~G~~~  134 (328)
                      ++|+.+
T Consensus        89 ~~~g~L   94 (277)
T d1xbba_          89 AELGPL   94 (277)
T ss_dssp             CTTEEH
T ss_pred             CCCCcH
Confidence            999853

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=6.9e-06  Score=72.52  Aligned_cols=76  Identities=14%  Similarity=0.055  Sum_probs=49.9

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.||.|..+.||++... ++ .|.+|+-+.      .....+..|...+...-++  -.+.+++..... .+..|+|||
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h--p~Iv~~~~~~~~-~~~~yivmE   83 (320)
T d1xjda_           7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHMFCTFQT-KENLFFVME   83 (320)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC--CcEEEEEEEEcc-CCceeEEEe
Confidence            467899999999999874 34 788998642      2223345566555433222  236666665443 467899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        84 y~~~g~L   90 (320)
T d1xjda_          84 YLNGGDL   90 (320)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9999853

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.15  E-value=6.8e-06  Score=71.59  Aligned_cols=74  Identities=16%  Similarity=0.058  Sum_probs=52.8

Q ss_pred             eeeeCCcccceeEEEEe-CCc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294           56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  132 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~  132 (328)
                      .+.||.|..+.||+... .++ .+.+|+... .....+..|.++++.+.+.  -.|+.+...... .+..++|||+++|.
T Consensus        12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~--~~i~~~~~~~~~-~~~~~ivme~~~~~   88 (299)
T d1ckia_          12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMELLGPS   88 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTS--TTCCCEEEEEEE-TTEEEEEEECCCCB
T ss_pred             eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCC--CcccEEEEEEec-CCEEEEEEEEcCCc
Confidence            56789999999999975 334 677898643 2345578899999988753  345555554433 46789999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=6.4e-06  Score=71.49  Aligned_cols=71  Identities=14%  Similarity=0.043  Sum_probs=50.1

Q ss_pred             eeCCcccceeEEEEeC---Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294           58 PVGGGCINLASRYGTD---AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  129 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~---~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l  129 (328)
                      .||.|..+.||+....   ++ .+.+|.-... .   ...+.+|+++++.|.+   -.+.+++.+..  ++..++||||+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~g~~~--~~~~~lvmE~~   90 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA   90 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCC---CCEeeEeeeec--cCeEEEEEEeC
Confidence            4899999999997542   23 4667875432 1   3457789999988853   24666776654  35689999999


Q ss_pred             cCCC
Q 020294          130 EFGS  133 (328)
Q Consensus       130 ~G~~  133 (328)
                      +|+.
T Consensus        91 ~~g~   94 (285)
T d1u59a_          91 GGGP   94 (285)
T ss_dssp             TTEE
T ss_pred             CCCc
Confidence            9975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=5.2e-06  Score=73.37  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=54.4

Q ss_pred             eeeeCCcccceeEEEEeC----Cc-cEEEEecCC-------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRS-------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~-------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ++.||.|..+.||++...    +| .+.+|+...       .....+..|+++++.+.+.  -.+.+++..-.. ....+
T Consensus        29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~--pnIv~~~~~~~~-~~~~~  105 (322)
T d1vzoa_          29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-ETKLH  105 (322)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC--TTBCCEEEEEEE-TTEEE
T ss_pred             EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCC--CeEEEeeeeecc-CCcee
Confidence            578999999999998752    23 688997532       1235577899999999764  235555554433 46889


Q ss_pred             EEEeeecCCCC
Q 020294          124 IIMEFIEFGSS  134 (328)
Q Consensus       124 ~v~e~l~G~~~  134 (328)
                      ++||+++|+.+
T Consensus       106 ~v~e~~~~~~L  116 (322)
T d1vzoa_         106 LILDYINGGEL  116 (322)
T ss_dssp             EEECCCCSCBH
T ss_pred             eeeecccccHH
Confidence            99999999863

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=9.6e-06  Score=72.08  Aligned_cols=76  Identities=14%  Similarity=0.004  Sum_probs=50.0

Q ss_pred             eeeeeCCcccceeEEEEe-CCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccc---c-CCCceE
Q 020294           55 KICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-PTGGSY  123 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~-~~~~~~  123 (328)
                      -++.+|.|..+.||++.. .+| .+.+|+-....     ...+.+|+++|+.|.+.   .+.+++....   . .++..+
T Consensus        22 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~---~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE---NVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCT---TBCCCSEEECSCSSTTTCCCC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCC---CeeeEEEEEeeccccccCceE
Confidence            367899999999999975 345 67889875321     23466899999988543   2334443321   1 134567


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      ++|+++.|+.
T Consensus        99 ~i~~~~~gg~  108 (348)
T d2gfsa1          99 YLVTHLMGAD  108 (348)
T ss_dssp             EEEEECCSEE
T ss_pred             EEEEeecCCc
Confidence            7788888864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.1e-05  Score=69.90  Aligned_cols=77  Identities=23%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--c----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           53 ITKICPVGGGCINLASRYGTDA--G----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      ....+.||.|..+.||+.....  +    .+.+|..... .   ...+.+|+++++.|.+   -.+-+++.+... .+..
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H---~nIv~~~g~~~~-~~~~   84 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH---HNIIRLEGVISK-YKPM   84 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCC---CCEeeeeEEEec-CCce
Confidence            4445568999999999976432  1    4678876432 1   2346678888887753   245566655433 4678


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++||+++++.
T Consensus        85 ~~v~e~~~~~~   95 (283)
T d1mqba_          85 MIITEYMENGA   95 (283)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEecccCc
Confidence            99999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.2e-05  Score=70.46  Aligned_cols=76  Identities=14%  Similarity=0.151  Sum_probs=52.4

Q ss_pred             eeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.||.|....||+.+..      ++ .+.+|.-....    ...+..|+.++..+.++  -.+-+++..... .+..++
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~H--pnIv~~~g~~~~-~~~~~l  104 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MNIVNLLGACTI-GGPTLV  104 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SSSCEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCC--CCEEEEEEEEee-CCEEEE
Confidence            567899999999998741      22 57888765321    33466788888888543  234456665443 456899


Q ss_pred             EEeeecCCCC
Q 020294          125 IMEFIEFGSS  134 (328)
Q Consensus       125 v~e~l~G~~~  134 (328)
                      +|||++|+.+
T Consensus       105 vmE~~~~g~l  114 (311)
T d1t46a_         105 ITEYCCYGDL  114 (311)
T ss_dssp             EEECCTTEEH
T ss_pred             EEEcCCCCCH
Confidence            9999999863

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=7e-06  Score=72.94  Aligned_cols=72  Identities=15%  Similarity=-0.020  Sum_probs=51.1

Q ss_pred             eeCCcccceeEEEEe-CCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc---CCCceEEEEeeecCC
Q 020294           58 PVGGGCINLASRYGT-DAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSYIIMEFIEFG  132 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~~~v~e~l~G~  132 (328)
                      .+|.|..+.||++.. .++ .|.+|+-..  ...+.+|++++..+.++  -.+.+++....+   .+...|+||||++|+
T Consensus        19 ~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--~~~~~~E~~~~~~~~~h--pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg   94 (335)
T d2ozaa1          19 VLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDGG   94 (335)
T ss_dssp             EEEECSSCEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             EeeeccCeEEEEEEECCCCCEEEEEEECC--cHHHHHHHHHHHHhcCC--CCCCeEEEEEeecccCCCEEEEEEECCCCC
Confidence            489999999999976 334 788998754  35677899887666543  356666654322   124679999999997


Q ss_pred             C
Q 020294          133 S  133 (328)
Q Consensus       133 ~  133 (328)
                      +
T Consensus        95 ~   95 (335)
T d2ozaa1          95 E   95 (335)
T ss_dssp             E
T ss_pred             c
Confidence            5

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=9e-06  Score=70.30  Aligned_cols=74  Identities=18%  Similarity=0.069  Sum_probs=50.7

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      -++.+|.|..+.||++... ++ .+++|+....     ....+..|+.+++.+.+   -.+.+++..... ....+++++
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h---~niv~~~~~~~~-~~~~~iv~~   81 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH---KNIVRLHDVLHS-DKKLTLVFE   81 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc---CCEEeecccccc-ccceeEEee
Confidence            4678999999999999863 44 5788986421     13456788888877754   245555554433 457789999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      +..|.
T Consensus        82 ~~~~~   86 (292)
T d1unla_          82 FCDQD   86 (292)
T ss_dssp             CCSEE
T ss_pred             ecccc
Confidence            98886

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=9.9e-06  Score=72.28  Aligned_cols=74  Identities=8%  Similarity=-0.036  Sum_probs=49.5

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc----C-CCceEEEEe
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGSYIIME  127 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~-~~~~~~v~e  127 (328)
                      .++.+|.|..+.||++... ++ .|.+|.-... .....+|+++|+.|.+   -.+.+++..-..    . ....++|||
T Consensus        24 ~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h---~niv~~~~~~~~~~~~~~~~~~~lv~E   99 (350)
T d1q5ka_          24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRFKNRELQIMRKLDH---CNIVRLRYFFYSSGEKKDEVYLNLVLD   99 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSSCCHHHHHHHHCCC---TTBCCEEEEEEEC--CCSCCEEEEEEE
T ss_pred             eeeEEeeCcCeEEEEEEECCCCCEEEEEEECcc-chHHHHHHHHHHhcCC---CCCCcEEEEEEecCccCCceEEEEEEe
Confidence            4556899999999999864 34 6788987543 2334579999998854   245555443211    1 234589999


Q ss_pred             eecCC
Q 020294          128 FIEFG  132 (328)
Q Consensus       128 ~l~G~  132 (328)
                      |++|+
T Consensus       100 y~~~~  104 (350)
T d1q5ka_         100 YVPET  104 (350)
T ss_dssp             CCSEE
T ss_pred             ccCCc
Confidence            99875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.1e-05  Score=70.17  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=47.9

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...=.+.||.|..+.||+....      ++ .+.+|.-....    ...+..|...+..+.++  -.+...+......++
T Consensus        14 ~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG   91 (299)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSTTS
T ss_pred             HEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCC--CeEEEeeeeeccCCC
Confidence            3444678999999999998742      12 46678764321    22344566666666443  223333433322245


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++|||++|+.+
T Consensus        92 ~~~iv~E~~~~g~L  105 (299)
T d1ywna1          92 PLMVIVEFCKFGNL  105 (299)
T ss_dssp             CCEEEEECCTTCBH
T ss_pred             eEEEEEEecCCCcH
Confidence            67999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.2e-05  Score=68.75  Aligned_cols=76  Identities=17%  Similarity=0.206  Sum_probs=49.3

Q ss_pred             eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceecccc---C----C
Q 020294           54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P----T  119 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~----~  119 (328)
                      .-++.+|.|..+.||++... +| .|.||+...     .....+.+|+.+|+.|.+.   .+.+.+..-..   .    .
T Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~---nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          13 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE---NVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCT---TBCCEEEEEEC---------
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCC---CccceEeeeecccccccccC
Confidence            34678999999999999863 44 688997532     1234567899999998643   33333332111   0    3


Q ss_pred             CceEEEEeeecCC
Q 020294          120 GGSYIIMEFIEFG  132 (328)
Q Consensus       120 ~~~~~v~e~l~G~  132 (328)
                      +..+++||++++.
T Consensus        90 ~~~~iv~e~~~~~  102 (318)
T d3blha1          90 GSIYLVFDFCEHD  102 (318)
T ss_dssp             -CEEEEEECCCEE
T ss_pred             ceEEEEEeccCCC
Confidence            4679999998876

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.98  E-value=8.5e-06  Score=71.13  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=55.1

Q ss_pred             ceeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-++.+|.|....||+.+..      ++ .+.+|.-....    ...+..|+++++.|.+   -.+.+.+..... .+
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h---~niv~~~~~~~~-~~   89 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN---PNIVKLLGVCAV-GK   89 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SS
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCC---CCcccceeeecc-CC
Confidence            4566778999999999999742      22 57788765321    2457789988888754   235555555433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..+++||+++++.+
T Consensus        90 ~~~~v~e~~~~g~L  103 (301)
T d1lufa_          90 PMCLLFEYMAYGDL  103 (301)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEEecCCCcH
Confidence            78999999999853

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=5.6e-06  Score=72.64  Aligned_cols=76  Identities=16%  Similarity=0.148  Sum_probs=50.7

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cE--EEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SF--FVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  127 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~--vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e  127 (328)
                      .+.||.|..+.||+.... ++ .+  .+|....    .....+..|+++|..+.++  -.+-+++..... .+..++|||
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~H--pnIv~~~~~~~~-~~~~~iV~e   91 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIE   91 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--TTBCCEEEEEEE-TTEEEEEEC
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCC--CCEeeEEEEEec-CCeeEEEEE
Confidence            466899999999998653 33 33  3444322    2345678899888887543  346666665543 568899999


Q ss_pred             eecCCCC
Q 020294          128 FIEFGSS  134 (328)
Q Consensus       128 ~l~G~~~  134 (328)
                      |++|+.+
T Consensus        92 y~~~g~L   98 (309)
T d1fvra_          92 YAPHGNL   98 (309)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9999864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3.4e-05  Score=67.04  Aligned_cols=78  Identities=15%  Similarity=0.121  Sum_probs=51.3

Q ss_pred             eeeeeCCcccceeEEEEe-CC-cc-EEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCce
Q 020294           55 KICPVGGGCINLASRYGT-DA-GS-FFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~-~~-~~-~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~  122 (328)
                      -++.+|.|..+.||++.. .+ ++ +.+|+...     .....+.+|+.+++.|.....-.+.+++.....    ..+..
T Consensus        11 i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~   90 (305)
T d1blxa_          11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   90 (305)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceE
Confidence            366799999999999875 33 55 45787532     123456689999999975322345555543211    12467


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      +++||+++|+
T Consensus        91 ~~~~e~~~~~  100 (305)
T d1blxa_          91 TLVFEHVDQD  100 (305)
T ss_dssp             EEEEECCSCB
T ss_pred             EEEEEeccCC
Confidence            9999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.9e-05  Score=66.73  Aligned_cols=77  Identities=17%  Similarity=0.076  Sum_probs=46.0

Q ss_pred             eeeeeCCcccceeEEEEeCC--------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           55 KICPVGGGCINLASRYGTDA--------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~~--------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      =.+.||.|....||+++...        + .+.+|......    ...+..|...+..+.++  -.+-+++..... ++.
T Consensus        17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~H--pnIv~~~~~~~~-~~~   93 (299)
T d1fgka_          17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DGP   93 (299)
T ss_dssp             EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SSS
T ss_pred             EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCC--CeEEeccccccc-CCe
Confidence            35678999999999987421        1 46778765432    23455677777777543  234555544433 568


Q ss_pred             eEEEEeeecCCCC
Q 020294          122 SYIIMEFIEFGSS  134 (328)
Q Consensus       122 ~~~v~e~l~G~~~  134 (328)
                      .++||||++|+.+
T Consensus        94 ~~~v~e~~~~g~l  106 (299)
T d1fgka_          94 LYVIVEYASKGNL  106 (299)
T ss_dssp             CEEEECCCTTCBH
T ss_pred             EEEEEEccCCCcH
Confidence            8999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.9e-05  Score=67.77  Aligned_cols=76  Identities=20%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             eeeeeeeCCcccceeEEEEeCC--c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294           53 ITKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  123 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~  123 (328)
                      ..=.+.||.|..+.||+.....  +   .+.+|......    ...+..|+.+++.+.+   -.+.+++.+..  ++..+
T Consensus         9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~~~~~--~~~~~   83 (273)
T d1mp8a_           9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPVW   83 (273)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEC--SSSCE
T ss_pred             eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCeEE
Confidence            3335678999999999986432  2   34556544321    2446778888877743   23555665543  46789


Q ss_pred             EEEeeecCCC
Q 020294          124 IIMEFIEFGS  133 (328)
Q Consensus       124 ~v~e~l~G~~  133 (328)
                      +||||++|+.
T Consensus        84 iv~E~~~~g~   93 (273)
T d1mp8a_          84 IIMELCTLGE   93 (273)
T ss_dssp             EEEECCTTEE
T ss_pred             EEEEeccCCc
Confidence            9999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.9e-05  Score=69.11  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=51.8

Q ss_pred             ceeeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294           52 HITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  120 (328)
Q Consensus        52 ~i~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~  120 (328)
                      ...-.+.||.|..+.||+....       +..+.+|......    ...+.+|+.+++.+.+   -.+-+.+..... ++
T Consensus        21 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~~~~~~~~-~~   96 (308)
T d1p4oa_          21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQ   96 (308)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC---TTBCCEEEEECS-SS
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCC---CCEeeeeeEEec-CC
Confidence            4556778999999999997642       1267788765321    2335677777666643   234445554432 46


Q ss_pred             ceEEEEeeecCCCC
Q 020294          121 GSYIIMEFIEFGSS  134 (328)
Q Consensus       121 ~~~~v~e~l~G~~~  134 (328)
                      ..++||||++++.+
T Consensus        97 ~~~lv~e~~~~g~l  110 (308)
T d1p4oa_          97 PTLVIMELMTRGDL  110 (308)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceeEEEeecCCCCH
Confidence            78999999999854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.6e-05  Score=68.28  Aligned_cols=75  Identities=12%  Similarity=-0.111  Sum_probs=52.0

Q ss_pred             eeeeCCcccceeEEEEeC-Cc-cEEEEecCC---------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294           56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS---------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  124 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~  124 (328)
                      .+.+|.|..+.||+.... ++ .+.+|....         .....+..|+.+++.+... .-.+.+++..... .+..++
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~-h~nIv~~~~~~~~-~~~~~l   86 (273)
T d1xwsa_           9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG-FSGVIRLLDWFER-PDSFVL   86 (273)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS-SCSBCCEEEEEEC-SSEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccC-CCCccEEEEEEee-CCeEEE
Confidence            356899999999998753 44 788897532         1123456899999988641 1236667765543 467899


Q ss_pred             EEeeecCC
Q 020294          125 IMEFIEFG  132 (328)
Q Consensus       125 v~e~l~G~  132 (328)
                      |||+.+|.
T Consensus        87 v~e~~~~~   94 (273)
T d1xwsa_          87 ILERPEPV   94 (273)
T ss_dssp             EEECCSSE
T ss_pred             EEEeccCc
Confidence            99999874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.5e-05  Score=67.65  Aligned_cols=74  Identities=18%  Similarity=0.108  Sum_probs=43.3

Q ss_pred             eeeeeeCCcccceeEEEEe-CCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294           54 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  121 (328)
Q Consensus        54 ~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~  121 (328)
                      .-++.||.|..+.||++.. .+| .+.+|+.....     ...+.+|+++|+.|.+.   .+.+++......     ...
T Consensus        21 ~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---niv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          21 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE---NVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBT---TBCCCSEEECSCSSTTTCCC
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCC---CeeEEEEEeccCccccccce
Confidence            4467899999999999875 345 67889875321     23456799998888542   344555443221     235


Q ss_pred             eEEEEeeec
Q 020294          122 SYIIMEFIE  130 (328)
Q Consensus       122 ~~~v~e~l~  130 (328)
                      .++|||++.
T Consensus        98 ~~lv~e~~~  106 (346)
T d1cm8a_          98 FYLVMPFMG  106 (346)
T ss_dssp             CEEEEECCS
T ss_pred             EEEEEeccc
Confidence            699999983

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.8e-05  Score=67.38  Aligned_cols=76  Identities=18%  Similarity=0.184  Sum_probs=52.4

Q ss_pred             eeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294           53 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  122 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~  122 (328)
                      -.-++.+|.|..+.||+.... +|     ++++|....    .....+.+|+.+++.|.+   -.+.+++.+..  ++..
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~--~~~~   85 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TSTV   85 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCCe
Confidence            455678999999999998642 33     466776432    123457889999988853   24666776654  3577


Q ss_pred             EEEEeeecCCC
Q 020294          123 YIIMEFIEFGS  133 (328)
Q Consensus       123 ~~v~e~l~G~~  133 (328)
                      +++|+++.++.
T Consensus        86 ~~v~e~~~~~~   96 (317)
T d1xkka_          86 QLITQLMPFGC   96 (317)
T ss_dssp             EEEEECCTTCB
T ss_pred             eEEEEeccCCc
Confidence            89999998875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.7e-05  Score=66.01  Aligned_cols=76  Identities=20%  Similarity=0.180  Sum_probs=46.6

Q ss_pred             eeeeeeeCCcccceeEEEEe--CCc---cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294           53 ITKICPVGGGCINLASRYGT--DAG---SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  121 (328)
Q Consensus        53 i~~v~~i~~G~~n~~y~v~~--~~~---~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~  121 (328)
                      ..=++.||.|..+.||+...  .++   .+.+|+....   .   ...+..|+.+++.|.+   -.+.+++....  ++.
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H---~nIv~~~g~~~--~~~   84 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH---RNLIRLYGVVL--TPP   84 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSS
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEe--ecc
Confidence            34466899999999999864  233   4667765421   1   2456788988888843   34666666554  356


Q ss_pred             eEEEEeeecCCC
Q 020294          122 SYIIMEFIEFGS  133 (328)
Q Consensus       122 ~~~v~e~l~G~~  133 (328)
                      .++||||.+++.
T Consensus        85 ~~lv~e~~~~~~   96 (273)
T d1u46a_          85 MKMVTELAPLGS   96 (273)
T ss_dssp             CEEEEECCTTCB
T ss_pred             hheeeeeecCcc
Confidence            799999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=4.2e-05  Score=68.20  Aligned_cols=75  Identities=12%  Similarity=0.136  Sum_probs=49.0

Q ss_pred             eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294           55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  122 (328)
Q Consensus        55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~  122 (328)
                      -++.+|.|..+.||++... +| .|.+|+.+..  .   ...+.+|+.+++.+.+.   .+.+.+..-...     ....
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~~~~~f~~~~~~~~~~~~   97 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKTLEEFQDV   97 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCT---TBCCCSEEECSCCSTTTCCEE
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCC---CeeEEEEEEecccccccCcee
Confidence            3678999999999999754 34 7889987532  1   23466888888887432   344445432211     2577


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      |++|||+.|+
T Consensus        98 ~iv~Ey~~~~  107 (355)
T d2b1pa1          98 YLVMELMDAN  107 (355)
T ss_dssp             EEEEECCSEE
T ss_pred             EEEEeccchH
Confidence            9999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.86  E-value=0.0032  Score=55.26  Aligned_cols=77  Identities=14%  Similarity=0.057  Sum_probs=48.4

Q ss_pred             eeeeCCcccceeEEEEe-CCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCC--------CcccceeccccC-CCce
Q 020294           56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTI--------RAPRPFKVGALP-TGGS  122 (328)
Q Consensus        56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v--------~VP~~~~~~~~~-~~~~  122 (328)
                      ++.+|.|..+.||++.. .+| .+.||+....  ..+.+..|+.+++.+.+...+        .+.+++...... ....
T Consensus        18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~   97 (362)
T d1q8ya_          18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV   97 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccce
Confidence            77899999999999976 344 7888987643  134567899999988753211        244444333221 2345


Q ss_pred             EEEEeeecCC
Q 020294          123 YIIMEFIEFG  132 (328)
Q Consensus       123 ~~v~e~l~G~  132 (328)
                      +.+|.+..+.
T Consensus        98 ~~~~~~~~~~  107 (362)
T d1q8ya_          98 HVVMVFEVLG  107 (362)
T ss_dssp             EEEEEECCCC
T ss_pred             eeeeeecccc
Confidence            5666655443

>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Actin-fragmin kinase, catalytic domain
domain: Actin-fragmin kinase, catalytic domain
species: Physarum polycephalum [TaxId: 5791]

Probab=94.20  E-value=0.077  Score=45.04  Aligned_cols=71  Identities=17%  Similarity=0.158  Sum_probs=48.3

Q ss_pred             eeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc------------------C-
Q 020294           58 PVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL------------------P-  118 (328)
Q Consensus        58 ~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~------------------~-  118 (328)
                      .++.+.+.-|+.|.+++|.+|+|....     ...|.-. ..|+...++|||+..-....                  . 
T Consensus        75 ~~s~~Gs~Gv~FV~~e~gaiVlK~s~t-----ta~E~y~-~eLAr~LGvpvPqmRvI~~~~~E~~~~~~~~l~~~e~d~~  148 (342)
T d1cjaa_          75 ERSEKGTEGLFFVETESGVFIVKRSTN-----IESETFC-SLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV  148 (342)
T ss_dssp             EECCSTTSCEEEEEESSCEEEEECCTT-----HHHHHHH-HHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred             EEeecCCceEEEEEcCCceEEEecCCc-----hHHHHHH-HHHHHHhCCCCCceEEecCCCHHHHHHHHHHhcCCChhHH
Confidence            344555567899999999999999653     3445433 34455558999986644310                  0 


Q ss_pred             -----CCceEEEEeeecCCCC
Q 020294          119 -----TGGSYIIMEFIEFGSS  134 (328)
Q Consensus       119 -----~~~~~~v~e~l~G~~~  134 (328)
                           ....+++|||++|.++
T Consensus       149 I~sel~~A~~liMeYvpG~~l  169 (342)
T d1cjaa_         149 ITTLANQANILLMELVRGITL  169 (342)
T ss_dssp             HHHHTTCSEEEEEECCCEEES
T ss_pred             HHHHHhcccceeeeccCCccc
Confidence                 2467899999999865