Citrus Sinensis ID: 020374

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLHT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHcccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccHHHccccccccccccccccccccccccccccccccccccHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccHcccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccEEEEEccEccccccccEEHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSTALYIiksppvpalwfphslqktpkfefpifrnpnisnstsncnSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGspilvsglspsGIAAAFLLGTLtwrafgpsgFLLVATYFIIGTAATKVKMAQKEAQGVAekrkgrrgpgsvigssaAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFkvvprgtegavsvegTFAGIFASILLAWVGCltgqinapEAVICVIASQIANLGESIIGAalqekpgfkwlnndaVNIINISMGSILAVLMQQIVLQSLHT
Flexible Loop (DISEMBL)
MSTALYIiksppvpalwFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQgvaekrkgrrgpgsvigsSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSeigkaygkttyLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLHT
Low Complexity Region (SEG)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRnpnisnstsncnssKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLHT
Disordered region (IsUnstruct)
****LYIIKSPPVPALWFPHSLQKTPKFEFPIFRN**************MLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQ****
Disordered Region (DISOPRED)
***ALY*IKSPPVPA************FEFPIFRNPNI******************NAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQ**************GPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLH*
Disordered Region (DISEMBL)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLHT
Disordered Region (DISPRO)
*STALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTS***SSKMLLL*****APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLH*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQSLHT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
P73555	258	Uncharacterized membrane	N/A	no	0.706	0.895	0.464	1e-41
Q58343	238	Uncharacterized membrane	yes	no	0.507	0.697	0.335	9e-15

>sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 150/237 (63%), Gaps = 6/237 (2%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++ N  +  L +      L+P G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLW-QLGFVA 198
           T++   +KEA G+AEKR G+RGP +V GS+    +CA    FG    E  +LW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIAFGP---EPWQLWLALGYVA 134

Query: 199 SFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCL 258
           SF TKLSDT +SE+GKAYGK T+L+TT + VPRGTEGAVSVEGT AG  A + LA +G  
Sbjct: 135 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYG 194

Query: 259 TGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAV 315
            G I+    +   +A+ IA   ES+IGA LQ K  + WL N+ VN IN  +G+ +A+
Sbjct: 195 VGLISFGGIIFSTLAAFIATNLESVIGATLQNK--WPWLTNEVVNGINTFLGAAIAI 249

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q58343|Y933_METJA Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 19/185 (10%)

Query: 136 GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL- 194
           G   ++V + +K+A+ + E  +  +   +V+ +     + A L+IFG         W L 
Sbjct: 66  GVLVSRVGLEKKKAKKMDETCRSLK---NVLANGLIPILFAILAIFGFN-------WALI 115

Query: 195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAW 254
           G+++S     SDT SSE+G    +   L+TTF+VV +GT+GA+++ GT AG+  + L+  
Sbjct: 116 GYISSIAAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGL 175

Query: 255 VGCLT-GQINAPEAVICVIASQIA-NLGESIIGAALQEKPGFKWLNNDAVNIINISMGSI 312
            G L  G I   + V+C  A  IA NL +S++GA  + K     LNN+ VN+I   +G I
Sbjct: 176 FGYLLFGDI---KIVLCGTAGGIAGNLADSLVGALFERKG---ILNNEHVNLIATIVGGI 229

Query: 313 LAVLM 317
           + VL+
Sbjct: 230 IGVLI 234

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
255582681	320	conserved hypothetical protein [Ricinus	0.914	0.934	0.759	1e-123
224116968	273	predicted protein [Populus trichocarpa]	0.834	1.0	0.817	1e-123
302142819	662	unnamed protein product [Vitis vinifera]	0.941	0.465	0.712	1e-118
359493882	315	PREDICTED: uncharacterized membrane prot	0.941	0.977	0.712	1e-118
356544132	270	PREDICTED: uncharacterized membrane prot	0.798	0.966	0.823	1e-118
356549616	344	PREDICTED: uncharacterized membrane prot	0.819	0.779	0.813	1e-117
18412044	333	uncharacterized transmembrane protein [A	0.807	0.792	0.753	1e-113
21592713	333	unknown [Arabidopsis thaliana]	0.807	0.792	0.753	1e-113
297842641	334	integral membrane family protein [Arabid	0.807	0.790	0.75	1e-112
42572161	342	uncharacterized transmembrane protein [A	0.807	0.771	0.728	1e-111

>gi|255582681|ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis] gi|223528199|gb|EEF30259.1| conserved hypothetical protein [Ricinus communis]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/303 (75%), Positives = 256/303 (84%), Gaps = 4/303 (1%)

Query: 27  KFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAP---SLQVAVSEAMNLVQLSQPTWQSA 83
           +F     R   I    SN    KML   +    P   S+Q A+S AMNL+Q + PTWQSA
Sbjct: 18  QFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQTPNAVSMQGALSGAMNLIQSAPPTWQSA 77

Query: 84  LLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVK 143
           L++NV+IF+LGSPIL+SGLS SGI AAFLLGTLTWRAFGPSGFLLVA YF+IGTAATKVK
Sbjct: 78  LVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGFLLVACYFVIGTAATKVK 137

Query: 144 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTK 203
           MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+GVGG  FSRLW+LGFVASFCTK
Sbjct: 138 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFSRLWELGFVASFCTK 197

Query: 204 LSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQIN 263
           LSDTVSSEIGKAYGK TYLVTTFK+VPRGTEGAVSVEGT AG+ ASILLA +GC  G+I+
Sbjct: 198 LSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGLLASILLASIGCFLGEIH 257

Query: 264 APEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQ 323
            PEAVICVIASQIAN+GESIIGA  QEK GF+WLNND VN++NIS+GSILAVLMQQ+ LQ
Sbjct: 258 IPEAVICVIASQIANVGESIIGATFQEKEGFRWLNNDVVNVLNISIGSILAVLMQQL-LQ 316

Query: 324 SLH 326
           +LH
Sbjct: 317 NLH 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116968|ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1| predicted protein [Populus trichocarpa]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/274 (81%), Positives = 248/274 (90%), Gaps = 1/274 (0%)

Query: 51  LLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAA 110
           +L HR +A  S+Q  +S+AMNL+Q + PTW+SAL SN++IFV+GSPILVSGLS SGI AA
Sbjct: 1   MLPHRPHAV-SMQGVLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAA 59

Query: 111 FLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 170
           +LLGTLTWRAFG SGFLLVA+YF+IGTA TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA
Sbjct: 60  YLLGTLTWRAFGASGFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 119

Query: 171 AGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 230
           AGCVCAFLSIFG GG  F  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP
Sbjct: 120 AGCVCAFLSIFGTGGRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 179

Query: 231 RGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQE 290
           RGTEGAVS EGT AG+ ASILLA +GC+ G+INAPEAVICVIASQIAN+GESIIGAA QE
Sbjct: 180 RGTEGAVSAEGTLAGLLASILLASIGCILGEINAPEAVICVIASQIANVGESIIGAAFQE 239

Query: 291 KPGFKWLNNDAVNIINISMGSILAVLMQQIVLQS 324
           K GF+WLNNDAVN+INIS+GSILAVLMQQ+ L+S
Sbjct: 240 KEGFQWLNNDAVNVINISVGSILAVLMQQVFLRS 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142819|emb|CBI20114.3| unnamed protein product [Vitis vinifera]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/323 (71%), Positives = 262/323 (81%), Gaps = 15/323 (4%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H+   T +  +P   +P            KM L  +A  N 
Sbjct: 350 LSTTLF--RFPPIPLQQFHHT-SSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 396

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 397 VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 456

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 457 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 516

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 517 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 576

Query: 239 VEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLN 298
            EGT AG+ ASILLA+VGCL GQI+A EAVICV+A+QIANLGES IGAALQ K GF+WLN
Sbjct: 577 AEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWLN 636

Query: 299 NDAVNIINISMGSILAVLMQQIV 321
           ND VN+INISMGSILA+L+Q+I+
Sbjct: 637 NDVVNVINISMGSILAILIQKIL 659

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493882|ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis vinifera]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/323 (71%), Positives = 262/323 (81%), Gaps = 15/323 (4%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H+   T +  +P   +P            KM L  +A  N 
Sbjct: 3   LSTTLF--RFPPIPLQQFHHT-SSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 49

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 50  VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 109

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 110 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 169

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 170 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 229

Query: 239 VEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLN 298
            EGT AG+ ASILLA+VGCL GQI+A EAVICV+A+QIANLGES IGAALQ K GF+WLN
Sbjct: 230 AEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWLN 289

Query: 299 NDAVNIINISMGSILAVLMQQIV 321
           ND VN+INISMGSILA+L+Q+I+
Sbjct: 290 NDVVNVINISMGSILAILIQKIL 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544132|ref|XP_003540509.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/261 (82%), Positives = 235/261 (90%)

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
           A  +Q AV  A+ LVQ S  TWQSALLSN +IF+LGSPILVSGLS SGI AAFLLGTLTW
Sbjct: 3   ATRIQDAVGGALALVQSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTW 62

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEKR+GRRGPGSVIGSSAAGC+CAFL
Sbjct: 63  RAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFL 122

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           +IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFK+VPRGTEGAVS
Sbjct: 123 TIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVS 182

Query: 239 VEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLN 298
           VEGT AGI ASI+LA V  L G++ + EA+ICV+A+QIANLGESIIGAALQEK GFKWLN
Sbjct: 183 VEGTLAGILASIVLALVSFLMGEVGSHEAIICVLAAQIANLGESIIGAALQEKEGFKWLN 242

Query: 299 NDAVNIINISMGSILAVLMQQ 319
           NDAVN+INISMGSI+A+ MQQ
Sbjct: 243 NDAVNVINISMGSIIAIFMQQ 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549616|ref|XP_003543188.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/268 (81%), Positives = 237/268 (88%)

Query: 52  LLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAF 111
           L  R   A  +Q AV  A+ LVQ S  TWQSALLSN +IF LGSPILVSGLS SGI AAF
Sbjct: 70  LFPRTMHASRIQDAVGGALALVQSSPATWQSALLSNALIFFLGSPILVSGLSLSGIGAAF 129

Query: 112 LLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           LLGTLTWRAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEK++GRRGPGSVIGSSAA
Sbjct: 130 LLGTLTWRAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKKRGRRGPGSVIGSSAA 189

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GC+CAFL+IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR
Sbjct: 190 GCICAFLTIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 249

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEK 291
           GTEGAVSVEGT AGI ASI+LA+V  L G++ + EA+ICV+A+QIANLGESIIGAALQEK
Sbjct: 250 GTEGAVSVEGTLAGILASIVLAFVSFLIGEVGSHEAIICVLAAQIANLGESIIGAALQEK 309

Query: 292 PGFKWLNNDAVNIINISMGSILAVLMQQ 319
            GFKWLNNDAVN+INISMGSI+AV MQQ
Sbjct: 310 EGFKWLNNDAVNVINISMGSIIAVFMQQ 337

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412044|ref|NP_565184.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|4836871|gb|AAD30574.1|AC007260_5 Unknown protein [Arabidopsis thaliana] gi|14334658|gb|AAK59507.1| unknown protein [Arabidopsis thaliana] gi|17104591|gb|AAL34184.1| unknown protein [Arabidopsis thaliana] gi|332198007|gb|AEE36128.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/264 (75%), Positives = 235/264 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNND 300
           GT AG+ AS  LA VGC  GQI  PEA +CV+ASQIANLGESIIGA+ Q+K GFKWLNND
Sbjct: 247 GTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNND 306

Query: 301 AVNIINISMGSILAVLMQQIVLQS 324
            VN+INIS+GSI+A+LMQQ +LQ+
Sbjct: 307 VVNVINISLGSIVAILMQQFILQN 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592713|gb|AAM64662.1| unknown [Arabidopsis thaliana]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/264 (75%), Positives = 235/264 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNND 300
           GT AG+ AS  LA VGC  GQI  PEA +CV+ASQIANLGESIIGA+ Q+K GFKWLNND
Sbjct: 247 GTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNND 306

Query: 301 AVNIINISMGSILAVLMQQIVLQS 324
            VN+INIS+GSI+A+LMQQ +LQ+
Sbjct: 307 VVNVINISLGSIVAILMQQFILQN 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842641|ref|XP_002889202.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297335043|gb|EFH65461.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/264 (75%), Positives = 234/264 (88%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 68  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 127

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 128 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 187

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 188 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSIE 247

Query: 241 GTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNND 300
           GT AG+ AS  LA VGC  GQI  PEA +CV+ASQIANLGESIIGA+ Q+K GFKWLNND
Sbjct: 248 GTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNND 307

Query: 301 AVNIINISMGSILAVLMQQIVLQS 324
            VN+INIS+GSI+A+ MQQ +LQ+
Sbjct: 308 VVNVINISLGSIVAIFMQQFILQN 331

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572161|ref|NP_974171.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|332198008|gb|AEE36129.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/273 (72%), Positives = 235/273 (86%), Gaps = 9/273 (3%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           +G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAA
Sbjct: 127 YGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAA 186

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPR
Sbjct: 187 GCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPR 246

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEK 291
           GTEGA+S+EGT AG+ AS  LA VGC  GQI  PEA +CV+ASQIANLGESIIGA+ Q+K
Sbjct: 247 GTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDK 306

Query: 292 PGFKWLNNDAVNIINISMGSILAVLMQQIVLQS 324
            GFKWLNND VN+INIS+GSI+A+LMQQ +LQ+
Sbjct: 307 EGFKWLNNDVVNVINISLGSIVAILMQQFILQN 339

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2202955	342	AT1G78620 [Arabidopsis thalian	0.816	0.780	0.728	1.1e-103
UNIPROTKB|A7E3R1	336	TMEM19 "Uncharacterized protei	0.678	0.660	0.278	1.5e-07
UNIPROTKB|G4NEB5	376	MGG_00802 "Uncharacterized pro	0.189	0.164	0.375	3.9e-07
UNIPROTKB|Q96HH6	336	TMEM19 "Transmembrane protein	0.648	0.630	0.279	3.6e-06
UNIPROTKB|F1SH34	336	TMEM19 "Uncharacterized protei	0.685	0.666	0.279	6.2e-06
UNIPROTKB|F1PGI2	297	TMEM19 "Uncharacterized protei	0.648	0.713	0.283	1e-05
TAIR|locus:2147705	288	AT5G19930 [Arabidopsis thalian	0.608	0.690	0.289	4.7e-05
ZFIN|ZDB-GENE-040625-78	322	tmem19 "transmembrane protein	0.685	0.695	0.252	7.7e-05
ASPGD|ASPL0000068016	365	AN7615 [Emericella nidulans (t	0.293	0.263	0.296	9.2e-05
DICTYBASE|DDB_G0287439	295	DDB_G0287439 "Transmembrane pr	0.571	0.633	0.254	0.00011

TAIR|locus:2202955 AT1G78620 [Arabidopsis thaliana (taxid:3702)]

 Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
 Identities = 201/276 (72%), Positives = 237/276 (85%)

Query:    58 AAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLT 117
             AA S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLT
Sbjct:    64 AAASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLT 123

Query:   118 WRAFGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGS 168
             WRA+G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGS
Sbjct:   124 WRAYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGS 183

Query:   169 SAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKV 228
             SAAGCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+
Sbjct:   184 SAAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKI 243

Query:   229 VPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAAL 288
             VPRGTEGA+S+EGT AG+ AS  LA VGC  GQI  PEA +CV+ASQIANLGESIIGA+ 
Sbjct:   244 VPRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASF 303

Query:   289 QEKPGFKWLNNDAVNIINISMGSILAVLMQQIVLQS 324
             Q+K GFKWLNND VN+INIS+GSI+A+LMQQ +LQ+
Sbjct:   304 QDKEGFKWLNNDVVNVINISLGSIVAILMQQFILQN 339

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|A7E3R1 TMEM19 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 145 (56.1 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 71/255 (27%), Positives = 111/255 (43%)

Query:    77 QPT--WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLLVATYF 133
             QP   W+      V + ++ +      L  SG     ++G  LT   F  S F  + T+F
Sbjct:    47 QPVSPWRWLFSVVVTVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTSLVTFF 104

Query:   134 IIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVG-G---FEFS 189
             +  +  TK K   K+      K  G+R    V  + A     A L +   G G    +FS
Sbjct:   105 LSSSKLTKWKGEAKKHLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIESGPGEIPIDFS 164

Query:   190 RL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVSVEG-- 241
             R     W  L  +A+  +   DT +SE+G    K+T  L+TT++ VP GT G V+V G  
Sbjct:   165 RQHTASWMCLSLLAALASSAGDTWASEVGPVLSKSTPRLITTWEKVPVGTNGGVTVVGLA 224

Query:   242 ------TFAGI-FASILLAWVGCLTGQINAPEAVICV---IASQIANLGESIIGAALQEK 291
                   TF GI +    L +V  L   I+AP+  I     +A  + ++ +S +GA +Q  
Sbjct:   225 SSLLGGTFVGITYFLTQLVFVNDL--DISAPQWPIIAFGGLAGLLGSIVDSYLGATMQ-- 280

Query:   292 PGFKWLNNDAVNIIN 306
               F  L+     ++N
Sbjct:   281 --FSGLDESTGMVVN 293

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4NEB5 MGG_00802 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 107 (42.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query:   191 LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT--TFKVVPRGTEGAVSVEGTFAGIFA 248
             L  +G +A++    +DT SSE+G     T  L+T  T + VPRGT G V+  G  AG+  
Sbjct:   135 LLPIGIIANYAAMAADTFSSELGILSSATPRLITSPTLRKVPRGTNGGVTALGLGAGLLG 194

Query:   249 SILL 252
             S+++
Sbjct:   195 SMVV 198

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q96HH6 TMEM19 "Transmembrane protein 19" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 68/243 (27%), Positives = 107/243 (44%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ + +    L  SG     ++G  LT   F  S F  
Sbjct:    45 NLRPISPWRW---LFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 ------EFSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
                   ++S  W  L  +A+      DT +SE+G    K++  L+TT++ VP GT G V+
Sbjct:   160 PVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKVPVGTNGGVT 219

Query:   239 VEG--------TFAGI-FASILLAWVGCLTGQINAPEAVICV---IASQIANLGESIIGA 286
             V G        TF GI +    L +V  L   I+AP+  I     +A  + ++ +S +GA
Sbjct:   220 VVGLVSSLLGGTFVGIAYFLTQLIFVNDL--DISAPQWPIIAFGGLAGLLGSIVDSYLGA 277

Query:   287 ALQ 289
              +Q
Sbjct:   278 TMQ 280

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SH34 TMEM19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 6.2e-06, P = 6.2e-06
 Identities = 73/261 (27%), Positives = 115/261 (44%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:    45 NLQPISPWRW---LFSVVVPVLIISNGFKKKSLDHSGAIGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEAKKRLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+  +   DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   160 PIDFSKQHTASWMCLSLLAALASSAGDTWASEVGTVLSKSPPRLITTWEKVPVGTNGGVT 219

Query:   239 VEG--------TFAGI--FASILLAWVGCLTGQINAPEAVICV---IASQIANLGESIIG 285
             + G        TF GI  F S L+ +V  L   I+AP+  I     +A  + ++ +S +G
Sbjct:   220 MVGLAFSLLGGTFVGIAYFLSQLV-FVNDL--DISAPQWPIIAFGGLAGLLGSIVDSYLG 276

Query:   286 AALQEKPGFKWLNNDAVNIIN 306
             A +Q    F  L+     ++N
Sbjct:   277 ATMQ----FSGLDESTGMVVN 293

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PGI2 TMEM19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 69/243 (28%), Positives = 106/243 (43%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:     6 NLQPISPWRW---LFSVVVPVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTS 60

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:    61 LLMFFLSSSKLTKWKGEIKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 120

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+      DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   121 PIDFSKQYTASWMCLSLLAALACSAGDTWASEVGPVLSKSPPRLITTWEKVPVGTNGGVT 180

Query:   239 VEG--------TFAGI-FASILLAWVGCLTGQINAPEAVICV---IASQIANLGESIIGA 286
             V G        TF GI +    L +V  L   I+AP+  I     +A  + ++ +S +GA
Sbjct:   181 VVGLVSSLLGGTFVGITYFLTQLVFVNDL--DISAPQWPIIAFGGLAGLLGSVVDSYLGA 238

Query:   287 ALQ 289
              +Q
Sbjct:   239 TMQ 241

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2147705 AT5G19930 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 64/221 (28%), Positives = 100/221 (45%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L  SG  A FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct:    29 LDLSGGIAGFLVMTIHFTAGFRYGALLLV-FFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 87

Query:   162 PGSVIGSSAAGCVCAFLSIFGVGGFEF---SRLWQL------GFVASFCTKLSDTVSSEI 212
                V+ +S    V   ++    G  +    S+  ++      G +  +     DT SSE+
Sbjct:    88 WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 147

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFA--SILLAWV--GCLTGQINAPEAV 268
             G        L+TTFK V +GT G V+  G  A + A  ++ L ++  G  T    +  A+
Sbjct:   148 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVAL 207

Query:   269 --ICVIA-SQIANL-G---ESIIGAALQEKPGFKWLNNDAV 302
               + VI  S +A L G   +SI+GA +Q   GF  + N  V
Sbjct:   208 KQLLVIPLSALAGLCGSLIDSILGATIQFS-GFCSVRNKVV 247

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040625-78 tmem19 "transmembrane protein 19" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 63/250 (25%), Positives = 99/250 (39%)

Query:    62 LQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAF 121
             L +  S     +Q   P W+      + +F+         L   G   A L+G +   A 
Sbjct:    21 LSLTASTYYGTLQPVSP-WRWLFSVLIPLFITFRASKRKSLDHGGAIGAMLVGFVLTMA- 78

Query:   122 GPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF 181
               S F ++ T+FI  T  T+ K   K+      K  G+R    V  +       A L + 
Sbjct:    79 NMSFFAVLLTFFITSTKLTRWKGEIKKKIDPEYKEGGQRNWLQVFCNGGVPTELALLYMI 138

Query:   182 GVGGFE--------FSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPR 231
               G  E        +S  W  L  + +      DT +SE+G    K+   L+TT++ VP 
Sbjct:   139 EAGPGEMAIDFAKQYSASWMCLSLLGALACSTGDTWASEVGPVLSKSKPKLITTWRDVPT 198

Query:   232 GTEGAVSVEGTFAGI-----------FASILLAWVGCLTGQINA-PEAVICVIASQIANL 279
             GT G V+  G  A +           F  ILL  V  L   ++  P  +   IA  + +L
Sbjct:   199 GTNGGVTSVGLLASVLGGGAAGVAYFFMQILL--VKDLHSAVSQWPLILYGAIAGLLGSL 256

Query:   280 GESIIGAALQ 289
              +S++GA +Q
Sbjct:   257 LDSLLGATMQ 266

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000068016 AN7615 [Emericella nidulans (taxid:162425)]

 Score = 102 (41.0 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
 Identities = 32/108 (29%), Positives = 52/108 (48%)

Query:   194 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVT--TFKVVPRGTEGAVSVEGTFAGIFASIL 251
             +G VA++    +DT SSE+G        L+T  T +VVP GT G V+  G  AG+  +  
Sbjct:   133 VGIVANYAAVAADTFSSELGILSKSKPRLITSPTLRVVPPGTNGGVTGTGILAGLLGAFT 192

Query:   252 LAWVGC----LTGQINAP--EAVICVIASQI-ANLG---ESIIGAALQ 289
             +A        L G   +   + +I ++A+     LG   +S++G   Q
Sbjct:   193 IAVTSAILLPLCGSFKSTVQDRIIWILATTFWGGLGSILDSVLGGLFQ 240

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0287439 DDB_G0287439 "Transmembrane protein 19" [Dictyostelium discoideum (taxid:44689)]

 Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 53/208 (25%), Positives = 89/208 (42%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L+ SG   A+L G  T   FG +   L+ +++   +  TK K + K+         G+R 
Sbjct:    30 LNQSGTITAWLTGVSTC-IFGSTFATLLLSFYFSSSYLTKYKSSIKKTIEDGHTAGGQRN 88

Query:   162 PGSVIGSSAAGCVCA----FLS-----IFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEI 212
                V+ +S  G + A    F S     +       FS      F+  +     DT +SE+
Sbjct:    89 YIQVLSNSLPGTIFAAIFYFFSKSSNTLINFNNDFFSSFIICCFIGHYSCCNGDTWASEL 148

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQI-NAP-----E 266
             G        L+TTFK VP+GT G +S  G  A I     +  +  ++    N P     +
Sbjct:   149 GILSKGEPILITTFKKVPKGTNGGLSPLGIGASIAGGFFIGLMFYISSYFFNLPFYHQQQ 208

Query:   267 AVICV-----IASQIANLGESIIGAALQ 289
              +I +     I+  + +L +S++G+ LQ
Sbjct:   209 QIISILLLSTISGLLGSLIDSLMGSTLQ 236

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
pfam01940	224	pfam01940, DUF92, Integral membrane protein DUF92	2e-77
COG1836	247	COG1836, COG1836, Predicted membrane protein [Func	2e-56
TIGR00297	237	TIGR00297, TIGR00297, TIGR00297 family protein	1e-54

>gnl|CDD|216799 pfam01940, DUF92, Integral membrane protein DUF92

 Score =  235 bits (603), Expect = 2e-77
 Identities = 93/232 (40%), Positives = 135/232 (58%), Gaps = 8/232 (3%)

Query: 83  ALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV 142
           A+L N+++  L     +  L+ SG  AA LLGTL W   G   F L+  +F++G+ ATK+
Sbjct: 1   AVLLNLLLGALA--YRLKSLTLSGALAAVLLGTLIWGLGGWRWFALLLVFFVLGSLATKL 58

Query: 143 KMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCT 202
              +K A G+AE R GRRGP +V+G+     + A L   G  G     L+  GFV SF  
Sbjct: 59  GYKRKAALGIAEARGGRRGPENVLGNGGVAAILALLYALGPTGAS---LFLAGFVGSFAA 115

Query: 203 KLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQI 262
            L+DT +SEIGK  G+T  L+TT K VP GT G VS+ GT A +  S+L+A V  L G I
Sbjct: 116 ALADTWASEIGKLSGRTPRLITTLKPVPPGTSGGVSLLGTLASLLGSLLIALVAWLLGLI 175

Query: 263 NAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILA 314
           + P  ++  +A  + +L +S++GA LQ K    WL N+ VN +   +G+++A
Sbjct: 176 SPPGVLVVTLAGFLGSLVDSLLGATLQRKG---WLTNELVNFLATLIGALVA 224

Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown. Length = 224

>gnl|CDD|224749 COG1836, COG1836, Predicted membrane protein [Function unknown]

 Score =  182 bits (465), Expect = 2e-56
 Identities = 91/249 (36%), Positives = 135/249 (54%), Gaps = 9/249 (3%)

Query: 76  SQPTWQSALLSNVVIFVLGSPILVSG-LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFI 134
           +Q      LL+ ++I  LG+    +  L  SG  +A LLG L     G   FLL+  +F 
Sbjct: 6   TQMAIDPLLLALLLILFLGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFA 65

Query: 135 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL 194
           +G+ ATK K  +KEA GVAE R G R   +V+G+  A  + A L       +   +LW L
Sbjct: 66  LGSLATKYKYEEKEALGVAEGRDGARSLENVLGNGLAALLFAVLYAI----YPDPQLWFL 121

Query: 195 -GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLA 253
            GF AS  T  +DT++SEIGKAYGK   L+TTFK V  GT GAVS+ G  A +  + ++A
Sbjct: 122 GGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAAVAGAFIIA 181

Query: 254 WVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSIL 313
            +  L G I+    +   +A       +S++GA L+ K    +L N+ VN +   +G+I+
Sbjct: 182 LLSYLVGYISLGGVLSVTLAGFAGTNIDSLLGATLERK---GYLTNEGVNFLATFLGAII 238

Query: 314 AVLMQQIVL 322
            +L+  I+L
Sbjct: 239 GILIFLILL 247

Length = 247

>gnl|CDD|213522 TIGR00297, TIGR00297, TIGR00297 family protein

 Score =  178 bits (453), Expect = 1e-54
 Identities = 87/238 (36%), Positives = 135/238 (56%), Gaps = 8/238 (3%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++  V  F+L        L P G   A+++G +     G  G L++  +F +G+A 
Sbjct: 4   WLSAVILCV--FLLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAV 61

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVAS 199
           T+    +K+A G+AEKR G+RGP +V G+     + A    FG    E+     LG+VAS
Sbjct: 62  TRYGQEEKKAAGIAEKRSGQRGPKNVWGNGLTPALFALAIAFG---PEWDLWLALGYVAS 118

Query: 200 FCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLT 259
             T LSDT++SEIGKAYGK   L+TT + V  GT+GA+SVEGT AG   ++ +A +G L 
Sbjct: 119 VATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALLGYLL 178

Query: 260 GQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLM 317
           G I+    +   +A+      +S++GA L+ K    +L N+ VN+I   +G+I+ + +
Sbjct: 179 GLISFKGILFSTLAAFAGTNLDSLLGATLERK---GYLTNEHVNLIATFLGAIIGIGI 233

[Hypothetical proteins, Conserved]. Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
TIGR00297	237	conserved hypothetical protein TIGR00297.	100.0
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	100.0
COG1836	247	Predicted membrane protein [Function unknown]	100.0
KOG4491	323	consensus Predicted membrane protein [Function unk	100.0
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	96.48
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	95.41
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	94.03
PRK11624	285	cdsA CDP-diglyceride synthase; Provisional	83.46
PLN02953	403	phosphatidate cytidylyltransferase	81.1

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=100.00  E-value=5.2e-71  Score=512.85  Aligned_cols=232  Identities=37%  Similarity=0.615  Sum_probs=213.6

Q ss_pred             hHHHHHHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHhhchhhHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCC
Q 020374           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (327)
Q Consensus        79 ~~~~a~~~n~~~~~a~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~gf~lLl~FFl~sS~~TK~k~~~K~~l~~~~k~~G  158 (327)
                      +|..++++|.++  +..+||+|+||++|+++|+++|++++...|++++.+++.||++||++||+|+++|++++++|||+|
T Consensus         3 ~~~~a~~~~~~l--~~~~~~~~~L~~sG~~~a~~vG~~~~~~~g~~~~~~ll~Ff~~sS~~Tk~~~~~K~~~~~~e~~gg   80 (237)
T TIGR00297         3 LWLSAVILCVFL--LALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQEEKKAAGIAEKRSG   80 (237)
T ss_pred             HHHHHHHHHHHH--HHHHHHHccCCHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHhccHHHHHhcccccccCC
Confidence            478888888766  467889999999999999999999987899999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccc
Q 020374          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (327)
Q Consensus       159 ~R~~~QVlaNg~~a~~~all~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVS  238 (327)
                      +||++||+|||+++++|+++|.+...   .+..+.++|++++||++|||||||||++|+++||+||||||||||||||||
T Consensus        81 ~R~~~qVlaNg~~~~~~al~~~~~~~---~~~~~~~~f~~s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~~GT~GgVS  157 (237)
T TIGR00297        81 QRGPKNVWGNGLTPALFALAIAFGPE---WDLWLALGYVASVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAIS  157 (237)
T ss_pred             CCCHHHHHHhhHHHHHHHHHHHhccc---chHHHHHHHHHHHHHHHcchHHHhhhhccCCCCeEeecCccCCCCCCCccc
Confidence            99999999999999999998877533   245677999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHhhhHHHHHHhhhhhhhccCCCccccchhhHHHHHHHHHHHHHHHH
Q 020374          239 VEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQ  318 (327)
Q Consensus       239 llGtlAsllGs~lIa~~a~ll~~i~~~~~~~~~laG~lGsllDSlLGAtlQ~k~G~~~L~Nd~VN~lstl~galla~~~~  318 (327)
                      ++||+|+++|+++|+..+++++..+.+..++++++|++|+++||+||||+|+| |  |+|||.||+++|+++++++++++
T Consensus       158 ~~Gt~As~~Ga~~I~~~~~~~~~~~~~~~~~~~~aG~~Gsl~DSlLGAtlQ~~-g--~l~N~~VN~l~t~~g~~~a~~~~  234 (237)
T TIGR00297       158 VEGTLAGFAGALAIALLGYLLGLISFKGILFSTLAAFAGTNLDSLLGATLERK-G--YLTNEHVNLIATFLGAIIGIGIE  234 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhHHHhhc-c--ccccHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998888876666666788899999999999999999996 4  99999999999999999998875

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=2.3e-70  Score=505.75  Aligned_cols=221  Identities=38%  Similarity=0.524  Sum_probs=207.0

Q ss_pred             HHHHhhhhhhcCCChhHHHHHHHHHHHHHHhhchhhHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCCccCcccccccc
Q 020374           90 IFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSS  169 (327)
Q Consensus        90 ~~~a~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~gf~lLl~FFl~sS~~TK~k~~~K~~l~~~~k~~G~R~~~QVlaNg  169 (327)
                      ++++..+||+|+||++|+++|+++|++++...||+++++|+.||++||++||+|+++|++++++|+|+|+|||+||+|||
T Consensus         6 ~~l~~~a~~~k~Lt~sGa~aa~~vG~~~~~~~g~~~~~~L~~FF~~ss~~Tk~~~~~K~~~~~~~~~~g~R~~~QVlaNg   85 (226)
T PF01940_consen    6 LLLAILAYKKKSLTLSGALAAFLVGTLIYGFGGWPWFLLLLAFFISSSLATKYKKERKEKLGEAEKKGGRRDWWQVLANG   85 (226)
T ss_pred             HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCChHHHHHhcccccCCCCCChHHhhhcc
Confidence            34567889999999999999999999998899999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHH
Q 020374          170 AAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFAS  249 (327)
Q Consensus       170 ~~a~~~all~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs  249 (327)
                      +++++|+++|.+..  +..++.+.++|++++||++|||||||||++|+++||+||||||||||||||||++||+|+++|+
T Consensus        86 ~~a~~~al~~~~~~--~~~~~~~~~~~~~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~GgVS~lGt~as~~Ga  163 (226)
T PF01940_consen   86 GVAALCALLYAFFP--STPAPLLLLAFLGSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSGGVSLLGTLASLAGA  163 (226)
T ss_pred             HHHHHHHHHHHHhc--ccchHHHHHHHHHHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCCeechHHHHHHHHHH
Confidence            99999999987753  1235688999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCchhHHHHHHHhhhHHHHHHhhhhhhhccCCCccccchhhHHHHHHHHHHHH
Q 020374          250 ILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILA  314 (327)
Q Consensus       250 ~lIa~~a~ll~~i~~~~~~~~~laG~lGsllDSlLGAtlQ~k~G~~~L~Nd~VN~lstl~galla  314 (327)
                      ++|+.+++++...+.+.+++++++|++||++||+||||+|+  |++|+|||.|||+++++++++|
T Consensus       164 ~~Ia~~~~~~~~~~~~~~~~~~~~G~~Gsl~DSlLGAtlQ~--G~~~l~N~~VN~lstl~~al~A  226 (226)
T PF01940_consen  164 LLIALVAFLLGLISFPLVLLIALAGFLGSLLDSLLGATLQR--GRGWLNNDAVNFLSTLIGALVA  226 (226)
T ss_pred             HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhHHHhC--CCCCcChhHHHHHHHHHHHHhC
Confidence            99999999988777777888899999999999999999999  6899999999999999999875

; GO: 0016021 integral to membrane

>COG1836 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.1e-63  Score=462.05  Aligned_cols=235  Identities=36%  Similarity=0.468  Sum_probs=216.3

Q ss_pred             hHHHHHHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHhhchhhHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCC
Q 020374           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (327)
Q Consensus        79 ~~~~a~~~n~~~~~a~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~gf~lLl~FFl~sS~~TK~k~~~K~~l~~~~k~~G  158 (327)
                      .|+.+++++..+  .+.+||.|.||++|.++|+++|.+++...|++||++++.||++||.+||+|+++|++++.+|+++|
T Consensus        12 ~~l~all~~~~L--~~la~~~k~Ld~~G~~~A~~lG~~i~~~~g~~~fllll~Ff~~g~l~Tk~~~~~K~~~gvaE~~~g   89 (247)
T COG1836          12 PLLLALLLILFL--GALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFALGSLATKYKYEEKEALGVAEGRDG   89 (247)
T ss_pred             HHHHHHHHHHHH--HHHHHHhccCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccc
Confidence            467777777666  467889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccc
Q 020374          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (327)
Q Consensus       159 ~R~~~QVlaNg~~a~~~all~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVS  238 (327)
                      .|+.+||++|+.++.+|+++|....+   .+..+..+|++|+|+++|||||||||+.++++|||||||||||||||||||
T Consensus        90 ~R~~~NV~gn~l~~~l~av~~~~~~~---~~~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS  166 (247)
T COG1836          90 ARSLENVLGNGLAALLFAVLYAIYPD---PQLWFLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVS  166 (247)
T ss_pred             cccHHHHhhccHHHHHHHHHHHhCCC---chHHHHHHHHHHHHHHhhhHHHHHHhHhhCCCeEEEEeeeEcCCCCCCccc
Confidence            99999999999999999998754322   134678999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHhhhHHHHHHhhhhhhhccCCCccccchhhHHHHHHHHHHHHHHHH
Q 020374          239 VEGTFAGIFASILLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMGSILAVLMQ  318 (327)
Q Consensus       239 llGtlAsllGs~lIa~~a~ll~~i~~~~~~~~~laG~lGsllDSlLGAtlQ~k~G~~~L~Nd~VN~lstl~galla~~~~  318 (327)
                      ++||+|+++|+++|++++++++..+.+....++++||+|+++||++|||+|+|   .|||||.|||++|+.+++++++++
T Consensus       167 ~~GelAav~Ga~iIal~~~l~~~~~~~~v~~vtlaGf~G~~iDSllGAtle~k---g~LtN~~VNflaT~~ga~i~i~i~  243 (247)
T COG1836         167 LVGELAAVAGAFIIALLSYLVGYISLGGVLSVTLAGFAGTNIDSLLGATLERK---GYLTNEGVNFLATFLGAIIGILIF  243 (247)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhHHHHhhHHHHhh---eeecccchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999988766777889999999999999999999997   389999999999999999999887


Q ss_pred             HHH
Q 020374          319 QIV  321 (327)
Q Consensus       319 ~~~  321 (327)
                      ..+
T Consensus       244 l~~  246 (247)
T COG1836         244 LIL  246 (247)
T ss_pred             Hhh
Confidence            653

>KOG4491 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.1e-56  Score=414.87  Aligned_cols=236  Identities=26%  Similarity=0.355  Sum_probs=201.2

Q ss_pred             hHHHHHHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHH-HHHhhchhhHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcC
Q 020374           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTL-TWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRK  157 (327)
Q Consensus        79 ~~~~a~~~n~~~~~a~~~~~~ksLT~sGa~aA~lvG~l-~~~~~G~~gf~lLl~FFl~sS~~TK~k~~~K~~l~~~~k~~  157 (327)
                      .|+.+.++..++  +..+||||+||.||++++++||++ ++.  ..+.|..|++||++||++||+|++.|++++.+|+|+
T Consensus        41 RwlFsvvvp~li--~~~~lkrkSld~SGa~~G~lV~filtIa--~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~~eg  116 (323)
T KOG4491|consen   41 RWLFSVVVPVLI--VSNGLKRKSLDHSGALGGLLVGFILTIA--NHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEYKEG  116 (323)
T ss_pred             HHHHHHHHHHHH--HHHHHhhcccccccchhHHHHHHHHHHh--cchhHHHHHHHHHccchhhhHHHHHHHHHHHHHhhc
Confidence            777777766655  467899999999999999999997 442  334688999999999999999999999999998875


Q ss_pred             -CccCcccccccchHHHHHHHHHHHhcCCcc----h-----hHHHHHHHHHHHHHhhccchhhhhh-cccCCceeEeeCC
Q 020374          158 -GRRGPGSVIGSSAAGCVCAFLSIFGVGGFE----F-----SRLWQLGFVASFCTKLSDTVSSEIG-KAYGKTTYLVTTF  226 (327)
Q Consensus       158 -G~R~~~QVlaNg~~a~~~all~~~~~~~~~----~-----~~~~~l~fvas~Aaa~ADTwASEIG-~ls~~~PrLITT~  226 (327)
                       |||+|.||+|||+++..++++|....++..    +     .....++.++++|||++|||+||+| ++|+++||+||||
T Consensus       117 ~GQRNWvQVlCNggva~~Lally~~~~G~ge~~vDf~~~y~~swl~~~~~~a~ACcnGDTWsSElG~VLS~~~PrlItTw  196 (323)
T KOG4491|consen  117 LGQRNWVQVLCNGGVATELALLYMIENGPGEIPVDFSKQYSASWLCLSLLAALACCNGDTWSSELGPVLSKSSPRLITTW  196 (323)
T ss_pred             cCccchhhhhcCCcchHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHhcCCChhhhhhcchhccCCCceEEee
Confidence             999999999999999999999988776531    1     2234588999999999999999999 8889999999999


Q ss_pred             eecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhc--------CCchhHHHH---HHHhhhHHHHHHhhhhhhhcc----
Q 020374          227 KVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ--------INAPEAVIC---VIASQIANLGESIIGAALQEK----  291 (327)
Q Consensus       227 k~VppGTnGgVSllGtlAsllGs~lIa~~a~ll~~--------i~~~~~~~~---~laG~lGsllDSlLGAtlQ~k----  291 (327)
                      ||||+|||||||..|.+++++|+.++++..++...        ++.+|+.++   .++|++|+++||+||||+|..    
T Consensus       197 ~~Vp~GTNGGVt~~Gl~~sLlgGt~VG~~yf~t~l~tv~c~ldis~pQwpiIafgglAGL~GSlvDS~LGat~QfsG~~e  276 (323)
T KOG4491|consen  197 EKVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLITVNCDLDISAPQWPIIAFGGLAGLLGSLVDSYLGATMQFSGFNE  276 (323)
T ss_pred             eecccCCCCCEeeHHHHHHHhccceeehHhhhhhhheeecccccCcccCcEeehhhHHHHHHHHHHHHhhhheeeccccc
Confidence            99999999999999999999999999865554432        345676554   478999999999999999982    


Q ss_pred             ----------------CCCccccchhhHHHHHHHHHHHHHHHH
Q 020374          292 ----------------PGFKWLNNDAVNIINISMGSILAVLMQ  318 (327)
Q Consensus       292 ----------------~G~~~L~Nd~VN~lstl~galla~~~~  318 (327)
                                      +|.++||||.||+++++..+++--..+
T Consensus       277 ~~gkvV~~Pg~~vrhisG~~ILDNn~VNlvSsllt~~l~p~aa  319 (323)
T KOG4491|consen  277 VRGKVVGKPGKKVRHISGVDILDNNGVNLVSSLLTSFLTPIAA  319 (323)
T ss_pred             ccCeeecCCCccceeecCcccccCCchhhHHHHHHHHHHHhhH
Confidence                            589999999999999998888754443

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=96.48  E-value=0.012  Score=53.44  Aligned_cols=87  Identities=18%  Similarity=0.240  Sum_probs=57.7

Q ss_pred             HHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhcC---CchhH----H
Q 020374          196 FVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQI---NAPEA----V  268 (327)
Q Consensus       196 fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs~lIa~~a~ll~~i---~~~~~----~  268 (327)
                      +.+-...+.+|++|+=+|+.++|++     +.+    .+..=|+||++++++++++++.+.......   +....    .
T Consensus       133 ~~~i~~~~~gD~~A~l~G~~fGk~~-----~~~----~sp~KT~EGsi~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~  203 (259)
T PF01148_consen  133 LIGILILGIGDSFAYLVGRRFGKHL-----APK----ISPKKTWEGSIAGFISSFIISFLLLYYLSSFFLSWWQAILISL  203 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCc-----CCC----CCCCCCHHHHhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence            3445667789999999999999861     112    233339999999999999987665443221   11111    2


Q ss_pred             HHHHHhhhHHHHHHhhhhhhhcc
Q 020374          269 ICVIASQIANLGESIIGAALQEK  291 (327)
Q Consensus       269 ~~~laG~lGsllDSlLGAtlQ~k  291 (327)
                      +..+.+.+|.+++|.+=....-|
T Consensus       204 ~~~i~~~~gdl~~S~~KR~~~iK  226 (259)
T PF01148_consen  204 LASIVEAFGDLFESAIKRDAGIK  226 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcc
Confidence            23356677888889885555544

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=95.41  E-value=0.88  Score=42.34  Aligned_cols=97  Identities=23%  Similarity=0.232  Sum_probs=59.3

Q ss_pred             HHHHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q 020374          194 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQINAPEAVICVIA  273 (327)
Q Consensus       194 l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs~lIa~~a~ll~~i~~~~~~~~~la  273 (327)
                      +..++=++.+.+|+.||=+|+.++++++-.-+-|          |++|++|.+..++++..+.+...         ....
T Consensus       115 ~~~~~I~~l~~GD~lAsiiG~~~G~~~~~~~~~K----------SleGSla~fi~~~l~~~~~~~~~---------~~~~  175 (216)
T COG0170         115 VAIAGILVLALGDGLASIIGKRYGRHKRILGNGK----------SLEGSLAFFIASFLVLLVLYGYL---------GAFV  175 (216)
T ss_pred             HHHHHHHHHHHhhHHHHHhCcccCccccccCCCC----------chhhhHHHHHHHHHHHHHHHHHH---------HhHH
Confidence            4455557778999999999999998744444434          89999999999999865433211         1111


Q ss_pred             hhhHHHHHHhhhhhhhccCCCccccchhhHHHHHHHH
Q 020374          274 SQIANLGESIIGAALQEKPGFKWLNNDAVNIINISMG  310 (327)
Q Consensus       274 G~lGsllDSlLGAtlQ~k~G~~~L~Nd~VN~lstl~g  310 (327)
                      +.++..+ ..++++.+..++.++-||=.|=+.+.++.
T Consensus       176 ~~i~~~~-~~~~~~~~~~~~~~~~DNltIPl~~~~~~  211 (216)
T COG0170         176 GAIGALV-LEVGATATSLELLPLDDNLTIPLFAALLA  211 (216)
T ss_pred             HHHHHHH-HHHHHHHhhccCCCCCCceeHHHHHHHHH
Confidence            2222222 22333334333566677766666665443

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=94.03  E-value=0.23  Score=47.08  Aligned_cols=89  Identities=21%  Similarity=0.217  Sum_probs=65.7

Q ss_pred             HHHHHHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhc---CCch----hH
Q 020374          195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ---INAP----EA  267 (327)
Q Consensus       195 ~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs~lIa~~a~ll~~---i~~~----~~  267 (327)
                      .+......-.+|+.|+=+|+..+|+|        -.|-.|-.-|+||.+.|++++.+++........   .+..    ..
T Consensus       136 ~l~l~~~vw~~Di~Ayf~Gr~fGk~k--------l~p~iSP~KT~eGfigG~~~~~~v~~~~~~~~~~~~~~~~~~~~l~  207 (265)
T COG0575         136 LLLLFLGVWAGDIGAYFVGRRFGKHK--------LAPKISPKKTWEGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILG  207 (265)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHcCCCC--------CCCcCCCCCchHHhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            34445666779999999999999976        334456667999999999999998866443321   1111    12


Q ss_pred             HHHHHHhhhHHHHHHhhhhhhhcc
Q 020374          268 VICVIASQIANLGESIIGAALQEK  291 (327)
Q Consensus       268 ~~~~laG~lGsllDSlLGAtlQ~k  291 (327)
                      .++.+.+.+|-++||.+...++-|
T Consensus       208 ~~~~l~~~lGDL~eS~iKR~~gvK  231 (265)
T COG0575         208 LLLVLTSQLGDLFESYIKRLLGIK  231 (265)
T ss_pred             HHHHHHHHHhhHHHHHHHHccCCC
Confidence            345578899999999999999987

>PRK11624 cdsA CDP-diglyceride synthase; Provisional

Probab=83.46  E-value=4  Score=39.53  Aligned_cols=84  Identities=21%  Similarity=0.332  Sum_probs=59.9

Q ss_pred             HHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhcC--CchhH----HHHHHH
Q 020374          200 FCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQI--NAPEA----VICVIA  273 (327)
Q Consensus       200 ~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs~lIa~~a~ll~~i--~~~~~----~~~~la  273 (327)
                      +.+-.+||.|==.|+..+|++ +   ..++.|+.    |+||.+.|++++.+++.+.......  +....    .++.+.
T Consensus       159 ~~vw~sDt~AYf~Gr~fGk~K-L---~P~ISPkK----TwEG~iGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
T PRK11624        159 ILVWGADSGAYMFGKLFGKHK-L---APKVSPGK----TWEGFIGGLATAAVISWLFGMWAPLDVAPVTLLICSIVAALA  230 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCCC-C---CCcCCCCC----chhhhHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence            446679999999999998843 2   23555554    8999999999999988655333222  11111    334567


Q ss_pred             hhhHHHHHHhhhhhhhcc
Q 020374          274 SQIANLGESIIGAALQEK  291 (327)
Q Consensus       274 G~lGsllDSlLGAtlQ~k  291 (327)
                      |.+|.++||.+=...+-|
T Consensus       231 ~~~GDL~ES~lKR~~gVK  248 (285)
T PRK11624        231 SVLGDLTESMFKREAGIK  248 (285)
T ss_pred             HHHhHHHHHHHhhccCCC
Confidence            899999999998888776

>PLN02953 phosphatidate cytidylyltransferase

Probab=81.10  E-value=4.6  Score=41.43  Aligned_cols=84  Identities=24%  Similarity=0.234  Sum_probs=58.0

Q ss_pred             HHHHhhccchhhhhhcccCCceeEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHH-Hhhc-CCchh----HHHHHH
Q 020374          199 SFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGC-LTGQ-INAPE----AVICVI  272 (327)
Q Consensus       199 s~Aaa~ADTwASEIG~ls~~~PrLITT~k~VppGTnGgVSllGtlAsllGs~lIa~~a~-ll~~-i~~~~----~~~~~l  272 (327)
                      -.+.-.+||+|=-.|+..+|++.  .   ++.|+    =|++|.+.|++++.+++.+.. ++.. ....+    ..++.+
T Consensus       275 ~~~vw~~Di~AY~~G~~fGk~kl--~---~ISPk----KTwEG~iGGil~~vlv~~l~~~~l~~~~~~~~~i~lg~li~~  345 (403)
T PLN02953        275 FSGVIATDTFAFLGGKAFGRTPL--T---SISPK----KTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGFLNFF  345 (403)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCC--C---cCCCC----CeeeeehhHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence            34556789999999999998653  1   44443    589999999999999886553 2221 11111    133456


Q ss_pred             HhhhHHHHHHhhhhhhhcc
Q 020374          273 ASQIANLGESIIGAALQEK  291 (327)
Q Consensus       273 aG~lGsllDSlLGAtlQ~k  291 (327)
                      .|++|.+++|.+=.-.+-|
T Consensus       346 ~~~~GDL~eS~iKR~~gVK  364 (403)
T PLN02953        346 GSVFGDLTESMIKRDAGVK  364 (403)
T ss_pred             HHHhhHHHHHHHhHccCCC
Confidence            7889999999987777766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 3e-09
 Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 28/134 (20%)

Query: 204 LSDTVSSEIGKAYG---KTTYLVTT-----FKVVPRGTEGAVSVEGTFAGIFA-----SI 250
           L +  +++   A+    K   L+TT        +   T   +S++             S+
Sbjct: 250 LLNVQNAKAWNAFNLSCKI--LLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSL 306

Query: 251 LLAWVGCLTGQINAPEAVICVIASQIANLGESIIGAALQEKPG----FKWLNNDAVN-II 305
           LL ++ C    +  P                SII  ++++       +K +N D +  II
Sbjct: 307 LLKYLDCRPQDL--PRE-----VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359

Query: 306 NISMGSILAVLMQQ 319
             S+  +     ++
Sbjct: 360 ESSLNVLEPAEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
3dh4_A	530	Sodium/glucose cotransporter; membrane protein, sy	84.33

>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}

Probab=84.33  E-value=2.3  Score=42.41  Aligned_cols=58  Identities=7%  Similarity=0.006  Sum_probs=37.2

Q ss_pred             hhhhhcCCChhHHHHHHHHHHHHHHhh---c--h-------hhHHHHHHHHHhhhhhhhcchhhhhhhhh
Q 020374           95 SPILVSGLSPSGIAAAFLLGTLTWRAF---G--P-------SGFLLVATYFIIGTAATKVKMAQKEAQGV  152 (327)
Q Consensus        95 ~~~~~ksLT~sGa~aA~lvG~l~~~~~---G--~-------~gf~lLl~FFl~sS~~TK~k~~~K~~l~~  152 (327)
                      .++.-|..|..|++++.++|.+++...   .  +       .++.+-+..++..|++||-+.+++++.+.
T Consensus       415 lgl~wkr~~~~gA~~g~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~vSl~t~~~~~~~~~~~~  484 (530)
T 3dh4_A          415 LGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISV  484 (530)
T ss_dssp             HHHHCTTCCHHHHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCSSSSCTTCCCC
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhcCCCccccccccc
Confidence            455567799999999999998654221   1  1       12333344567778888877665544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00