Citrus Sinensis ID: 020394

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHcccccEEEEEEEEccccccEEEEcccccccEEEEEEccEEEEEEEEcccccHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccEEEEEcccccccccEEEEEcccHcccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccccEccccccccHHHHccccccccHHHccccccccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccHHHHccccccHHHcHHHHHHHHHHHHHHcEEEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEccccccHHHHHHHHcccc
Coil and Loop (DISEMBL)
mplssnsaialptvpipvpsiprrqancRKFSIKcsnenfsgqriitfspyrrkhscltnsvssdgnnsinvdvpfpsdysELLDQAKMAAELAVKDGMKLMEIEfptagldsvpgdseggiemtGSMRLICEFCdlfvtpekvtrtriffpeanevkFARKSVFegasfkldyltkpsffedfgfteKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGEldrirsgyypsffypkLAALSKTLFPVMETIYYIHNfkgrnggtlfrcypgswkVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Flexible Loop (DISEMBL)
mplssnsaialptvpipvpsiprRQANCRKFSikcsnenfsgqRIITFSPYRRKHSCLTnsvssdgnnsiNVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVtrtriffpeanevkfarkSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHqqevmpslkeVALDILPSA
Low Complexity Region (SEG)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Disordered region (IsUnstruct)
************************QANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLT************VDVPF***Y*ELLDQAKMAAELAVKDGMKLMEIEFPTAG***********IEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVAL******
Disordered Region (DISOPRED)
***************************************************************************FPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFG****************LFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPS*
Disordered Region (DISEMBL)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Disordered Region (DISPRO)
***********PTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
225427403	322	PREDICTED: uncharacterized protein LOC10	0.966	0.978	0.726	1e-129
356496430	324	PREDICTED: uncharacterized protein LOC10	0.975	0.981	0.703	1e-125
224071439	260	predicted protein [Populus trichocarpa]	0.794	0.996	0.830	1e-123
255557645	316	conserved hypothetical protein [Ricinus	0.809	0.835	0.789	1e-119
449456759	336	PREDICTED: uncharacterized protein LOC10	0.969	0.940	0.655	1e-117
109289908	338	hypothetical protein SBB1_14t00013 [Sola	0.809	0.781	0.727	1e-114
113208412	338	hypothetical protein SBB1_21t00009 [Sola	0.809	0.781	0.727	1e-114
357146418	322	PREDICTED: uncharacterized protein LOC10	0.984	0.996	0.663	1e-113
18422955	316	uncharacterized protein [Arabidopsis tha	0.812	0.838	0.752	1e-112
224034407	324	unknown [Zea mays] gi|413926746|gb|AFW66	0.975	0.981	0.656	1e-111

>gi|225427403|ref|XP_002263777.1| PREDICTED: uncharacterized protein LOC100265501 [Vitis vinifera] gi|296088391|emb|CBI37382.3| unnamed protein product [Vitis vinifera]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/325 (72%), Positives = 264/325 (81%), Gaps = 10/325 (3%)

Query: 9   IALPTVPI------PVPSIPRRQA-NCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNS 61
           + L T+PI      P+PS+   +  +CR F +K  + +F G +I  F    R      NS
Sbjct: 1   MTLSTIPIASRISIPIPSLQNPKVLSCRSFQVK-KDGSFCGPKIAAFK-MSRNLEFKANS 58

Query: 62  VSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGG 121
           VS D + S+  +VPFPSDYSE+L+QAK A ELA+KD  +LMEIEFPTAGL+SVPGD EGG
Sbjct: 59  VSGDSSASVGFNVPFPSDYSEILEQAKEATELALKDKKQLMEIEFPTAGLESVPGDGEGG 118

Query: 122 IEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFF 181
           IEMTGSM+LI EFCD+F+ PEK TRTRIFFPEANEVKFAR+S F GASFKLDYLTKPS F
Sbjct: 119 IEMTGSMQLIREFCDIFINPEKATRTRIFFPEANEVKFARQSAFGGASFKLDYLTKPSLF 178

Query: 182 EDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGEL 241
           EDFGF  KVKMADRVK EDELFLVAYPYFNVN +MLVVEELY EAV NTA KLIIFNGEL
Sbjct: 179 EDFGFVTKVKMADRVKPEDELFLVAYPYFNVN-EMLVVEELYNEAVVNTARKLIIFNGEL 237

Query: 242 DRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSN 301
           DRIRSGYYP FFYPKLAAL+K+L P MET+YYIHNFKGR GGTLFRCYPG WKVL+KV N
Sbjct: 238 DRIRSGYYPPFFYPKLAALTKSLLPKMETVYYIHNFKGRKGGTLFRCYPGPWKVLRKVRN 297

Query: 302 KYICLHQQEVMPSLKEVALDILPSA 326
           +YICLHQQEVMPSLKEVALDILPSA
Sbjct: 298 EYICLHQQEVMPSLKEVALDILPSA 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496430|ref|XP_003517071.1| PREDICTED: uncharacterized protein LOC100805878 [Glycine max]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/324 (70%), Positives = 259/324 (79%), Gaps = 6/324 (1%)

Query: 6   NSAIALPTVPIPVPSIPRRQ-ANCRKFSIKCSNE-NFSGQRIITFSPYRRKHSCLTNSVS 63
           +S + L   PI  PS+P    A    FS+K        G    + +P  RK +  T SVS
Sbjct: 4   SSTMILSNSPIASPSLPTSTGAKLETFSLKNDGVIRIRGATASSVAPRIRKTA--TCSVS 61

Query: 64  SDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIE 123
            DGN S+  DVPFP+DYSELL+QA++AA+LA+KD  +LMEIEFPTAGL SVPGD EGGIE
Sbjct: 62  KDGNASVETDVPFPADYSELLEQARVAADLAIKDNRQLMEIEFPTAGLGSVPGDGEGGIE 121

Query: 124 MTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFED 183
           MT SM+LI EFCD F++ EK TRTRIFFPEA+EV FAR+SVF G SFKLDYLTKPSFFED
Sbjct: 122 MTESMQLIREFCDRFISSEKATRTRIFFPEASEVDFARQSVFSGCSFKLDYLTKPSFFED 181

Query: 184 FGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDR 243
           FGF EK+KM+DRVK  DELFLV YPYFNVN ++LVVEELYKEAV NT  KLIIFNGELDR
Sbjct: 182 FGFVEKIKMSDRVKTGDELFLVGYPYFNVN-EILVVEELYKEAVLNTERKLIIFNGELDR 240

Query: 244 IRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSN-K 302
           IRSGYYPSFFYPKLAAL+KT  P+MET+YYIHNFKGRNGGTLFRCYPG WKVL++V N K
Sbjct: 241 IRSGYYPSFFYPKLAALTKTFLPMMETVYYIHNFKGRNGGTLFRCYPGPWKVLRRVGNRK 300

Query: 303 YICLHQQEVMPSLKEVALDILPSA 326
           Y+CLHQQ  MPSLKEVAL+ILPSA
Sbjct: 301 YVCLHQQNSMPSLKEVALEILPSA 324

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071439|ref|XP_002303460.1| predicted protein [Populus trichocarpa] gi|222840892|gb|EEE78439.1| predicted protein [Populus trichocarpa]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/260 (83%), Positives = 232/260 (89%), Gaps = 1/260 (0%)

Query: 67  NNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTG 126
           ++S+  DVPFP DY ELLDQAK A ELA +D  +LMEIEFPTAGL+SVPGD EGGIEMTG
Sbjct: 2   SSSVEFDVPFPRDYEELLDQAKKATELAWEDNKQLMEIEFPTAGLESVPGDGEGGIEMTG 61

Query: 127 SMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGF 186
           SM+LI EFCD FV+PEK TRTRIFFPEANEVKFAR+S FEG+S KLDYLTKPSFFEDFGF
Sbjct: 62  SMQLIREFCDRFVSPEKTTRTRIFFPEANEVKFARQSAFEGSSLKLDYLTKPSFFEDFGF 121

Query: 187 TEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRS 246
            EKVKM DRVK EDELFLVAYPYFNVN +MLVVEELYKEAV  TA KLIIFNGELDRIRS
Sbjct: 122 VEKVKMTDRVKPEDELFLVAYPYFNVN-EMLVVEELYKEAVVETARKLIIFNGELDRIRS 180

Query: 247 GYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICL 306
           GYYPSFFYPKLA+L KTLFP+MET+YYIHNFKGRNGGTLFRCYPG W+VL+KV N YICL
Sbjct: 181 GYYPSFFYPKLASLLKTLFPLMETVYYIHNFKGRNGGTLFRCYPGPWQVLRKVRNAYICL 240

Query: 307 HQQEVMPSLKEVALDILPSA 326
           HQQE MPSLKEVALDILPS 
Sbjct: 241 HQQEAMPSLKEVALDILPSV 260

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557645|ref|XP_002519852.1| conserved hypothetical protein [Ricinus communis] gi|223540898|gb|EEF42456.1| conserved hypothetical protein [Ricinus communis]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/266 (78%), Positives = 231/266 (86%), Gaps = 2/266 (0%)

Query: 62  VSSDGNNS-INVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEG 120
           VS +G++S +  DVP P DY ELL QAK A +LA+KDG +LMEIEFPTAGL+SVPGD EG
Sbjct: 52  VSRNGSSSSVESDVPLPRDYEELLVQAKKATDLALKDGKQLMEIEFPTAGLESVPGDGEG 111

Query: 121 GIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSF 180
           GIEMT SM+LI +FCD FV+PEK  RTR+FFPEANEVKFAR+S F G+S KLDYLTKPSF
Sbjct: 112 GIEMTESMQLIRQFCDRFVSPEKAARTRVFFPEANEVKFARESAFGGSSLKLDYLTKPSF 171

Query: 181 FEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGE 240
           FEDFGF EK+KM DRVK EDELFLVAYPYFNVN +MLVVEELY EAV NT  K+IIFNGE
Sbjct: 172 FEDFGFVEKIKMTDRVKPEDELFLVAYPYFNVN-EMLVVEELYNEAVVNTTRKMIIFNGE 230

Query: 241 LDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVS 300
           LDRIRSGYYPSFFYPKLA+L KTLFPVMET+YYIHNFKGR GGTLFRCYPG WKVL+KV 
Sbjct: 231 LDRIRSGYYPSFFYPKLASLLKTLFPVMETVYYIHNFKGRKGGTLFRCYPGPWKVLRKVK 290

Query: 301 NKYICLHQQEVMPSLKEVALDILPSA 326
            + ICLHQQE MPSLKEVALDILPSA
Sbjct: 291 KESICLHQQESMPSLKEVALDILPSA 316

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456759|ref|XP_004146116.1| PREDICTED: uncharacterized protein LOC101209709 [Cucumis sativus] gi|449509516|ref|XP_004163611.1| PREDICTED: uncharacterized LOC101209709 [Cucumis sativus]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/337 (65%), Positives = 254/337 (75%), Gaps = 21/337 (6%)

Query: 3   LSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSC---LT 59
            +S+S IA   +P+P P +      C + S + ++ +     +  F P R        L+
Sbjct: 8   FASSSTIATAVLPLPSPKLA-----CFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLS 62

Query: 60  NSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
           N  SS  N S ++DVPFP DYS+LL+QAK A E A+ D  +LMEIEFPTAGL+SVPGD E
Sbjct: 63  NRQSS--NASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRI----------FFPEANEVKFARKSVFEGAS 169
           GGIEMT SM+LI +FCD F+ P K TRTR+          FFPEANEVKFAR + FEG S
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSIKENHIQFFPEANEVKFARNTAFEGVS 180

Query: 170 FKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFN 229
           FKLDYLTKPSFFEDFGF EKVKMADRVK EDELFLVAYPYFNVN +MLVVEELYKEAV N
Sbjct: 181 FKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN-EMLVVEELYKEAVQN 239

Query: 230 TAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCY 289
           T  KLIIFNGELDRIRSGYYP FFYPKLAAL KTLFP MET+YYIHNFKG+ GG LFR Y
Sbjct: 240 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSY 299

Query: 290 PGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA 326
           PG WKVL+KV NK++C+HQQE MPSLKEVAL+ILPS+
Sbjct: 300 PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109289908|gb|AAP45177.2| hypothetical protein SBB1_14t00013 [Solanum bulbocastanum]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/294 (72%), Positives = 230/294 (78%), Gaps = 30/294 (10%)

Query: 61  SVSSDGNNSINVDVPFPSDYSELLDQ----------------------------AKMAAE 92
           S S D   SI  DVPFP DY+ELL Q                            AK A E
Sbjct: 47  SCSGDRAASIGFDVPFPKDYTELLQQVFILFAFSPLKIGGRGSGNGGGITREIKAKEATE 106

Query: 93  LAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFP 152
           LA+KD  +LMEIEFPTAGL SVPGD EGGIEMTGS++LI EFCDL V PEK T+TRIFFP
Sbjct: 107 LALKDNRQLMEIEFPTAGLGSVPGDGEGGIEMTGSIQLIREFCDLLVIPEKATKTRIFFP 166

Query: 153 EANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNV 212
           EANEVKFAR+S+F GASFKLDYLTKPSFFEDFGFTEKVKMADRVK EDELF+VAYPYFNV
Sbjct: 167 EANEVKFARQSIFGGASFKLDYLTKPSFFEDFGFTEKVKMADRVKPEDELFIVAYPYFNV 226

Query: 213 NGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIY 272
           N +MLVVEELY+ AV NT+ KLIIFNGELDRIRS  YP FFYPKLAALSKTLFP MET+Y
Sbjct: 227 N-EMLVVEELYQAAVLNTSRKLIIFNGELDRIRSD-YPPFFYPKLAALSKTLFPKMETVY 284

Query: 273 YIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA 326
           YIHNFKGRNGG LFRCYPG WKV ++V +  ICLHQQE MPSLKEVALDILPSA
Sbjct: 285 YIHNFKGRNGGVLFRCYPGPWKVFRRVGSTNICLHQQESMPSLKEVALDILPSA 338

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|113208412|gb|ABI34553.1| hypothetical protein SBB1_21t00009 [Solanum bulbocastanum]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/294 (72%), Positives = 230/294 (78%), Gaps = 30/294 (10%)

Query: 61  SVSSDGNNSINVDVPFPSDYSELLDQ----------------------------AKMAAE 92
           S S D   SI  DVPFP DY+ELL Q                            AK A E
Sbjct: 47  SCSGDRAASIGFDVPFPKDYTELLQQVFILFAFSPLKIGGWGSRNRGGITREIKAKEATE 106

Query: 93  LAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFP 152
           LA+KD  +LMEIEFPTAGL SVPGD EGGIEMTGS++LI EFCDL V PEK T+TRIFFP
Sbjct: 107 LALKDNRQLMEIEFPTAGLGSVPGDGEGGIEMTGSIQLIREFCDLLVIPEKATKTRIFFP 166

Query: 153 EANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNV 212
           EANEVKFAR+S+F GASFKLDYLTKPSFFEDFGFTEKVKMADRVK EDELF+VAYPYFNV
Sbjct: 167 EANEVKFARQSIFGGASFKLDYLTKPSFFEDFGFTEKVKMADRVKPEDELFIVAYPYFNV 226

Query: 213 NGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIY 272
           N +MLVVEELY+ AV NT+ KLIIFNGELDRIRS  YP FFYPKLAALSKTLFP MET+Y
Sbjct: 227 N-EMLVVEELYQAAVLNTSRKLIIFNGELDRIRSD-YPPFFYPKLAALSKTLFPKMETVY 284

Query: 273 YIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMPSLKEVALDILPSA 326
           YIHNFKGRNGG LFRCYPG WKV ++V +  ICLHQQE MPSLKEVALDILPSA
Sbjct: 285 YIHNFKGRNGGVLFRCYPGPWKVFRRVGSTNICLHQQESMPSLKEVALDILPSA 338

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357146418|ref|XP_003573985.1| PREDICTED: uncharacterized protein LOC100843789 [Brachypodium distachyon]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/327 (66%), Positives = 241/327 (73%), Gaps = 6/327 (1%)

Query: 1   MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRK-HSCLT 59
           M ++++ +I+ PT      S+P +Q     F I  S+    G   +     R   H C  
Sbjct: 1   MAMATSYSISNPTF-TSKSSLPNKQVPNWIFPIISSDNGSGGMFTLARRSLRAGFHVC-- 57

Query: 60  NSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
            +V+ D N        FPSDY+ELL QAK AAE A KDG +L+EIEFPTAGL SVPGD E
Sbjct: 58  -AVTGDQNTRNVFSANFPSDYTELLLQAKDAAESAFKDGKQLLEIEFPTAGLQSVPGDGE 116

Query: 120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
           GGIEMTGSM LI EFCD FV  EK TRTRIFFPEANEV FAR+S FEG S KLDYLTKPS
Sbjct: 117 GGIEMTGSMLLIREFCDRFVPAEKTTRTRIFFPEANEVTFARQSAFEGCSLKLDYLTKPS 176

Query: 180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNG 239
            FEDFGFT KVKMADRV+ EDE+FLVAYPYFNVN +MLVVEELYKEAV NT  K+IIFNG
Sbjct: 177 LFEDFGFTTKVKMADRVQPEDEIFLVAYPYFNVN-EMLVVEELYKEAVVNTDRKMIIFNG 235

Query: 240 ELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKV 299
           ELDRIRSGYYP FFYPKLA LSKT  P MET+YYIHNFKG  GG LFRCYPG WKVL+KV
Sbjct: 236 ELDRIRSGYYPPFFYPKLAELSKTFLPKMETVYYIHNFKGSKGGALFRCYPGPWKVLRKV 295

Query: 300 SNKYICLHQQEVMPSLKEVALDILPSA 326
              + CLH+QE MPSLKEVALDILPS 
Sbjct: 296 GGSFACLHEQEEMPSLKEVALDILPST 322

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422955|ref|NP_568702.1| uncharacterized protein [Arabidopsis thaliana] gi|14326508|gb|AAK60299.1|AF385707_1 AT5g48790/K24G6_12 [Arabidopsis thaliana] gi|18700216|gb|AAL77718.1| AT5g48790/K24G6_12 [Arabidopsis thaliana] gi|332008342|gb|AED95725.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 223/267 (83%), Gaps = 2/267 (0%)

Query: 61  SVSSDGNNSINVD-VPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
           SVS   NN+ +VD VPFP DY EL++QAK A E+A+KD  +LMEIEFPT+GL SVPGD E
Sbjct: 51  SVSGGYNNNTSVDNVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSGLASVPGDGE 110

Query: 120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
           G  EMT S+ +I EFCD  + PEK   TRIFFPEANEVKFA+K+VF G  FKLDYLTKPS
Sbjct: 111 GATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPS 170

Query: 180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNG 239
            FEDFGF E+VKMADRVK EDELFLVAYPYFNVN +MLVVEELYKEAV NT  KLIIFNG
Sbjct: 171 LFEDFGFFERVKMADRVKPEDELFLVAYPYFNVN-EMLVVEELYKEAVVNTDRKLIIFNG 229

Query: 240 ELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKV 299
           ELDRIRSGYYP FFYPKLAAL+KTL P MET+YYIHNFKG+ GG LFRCYPG W+VL++ 
Sbjct: 230 ELDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYPGPWQVLRRT 289

Query: 300 SNKYICLHQQEVMPSLKEVALDILPSA 326
            NKYIC+HQQE MPSLKEVALDIL SA
Sbjct: 290 RNKYICVHQQESMPSLKEVALDILASA 316

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224034407|gb|ACN36279.1| unknown [Zea mays] gi|413926746|gb|AFW66678.1| hypothetical protein ZEAMMB73_267474 [Zea mays]

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/323 (65%), Positives = 246/323 (76%), Gaps = 5/323 (1%)

Query: 4   SSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVS 63
           +S  ++A P +    P + ++ +N    +I  SN N +G  + T +  + ++     +V+
Sbjct: 5   TSYGSMANPPITSRTPFLSKQASNWIPATI--SNGNGTGG-MFTVASRKSRNGFQFCAVT 61

Query: 64  SDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIE 123
            D  +    DV FPSDY+ELL QAK AAE A KDG +L+EIEFPTAGL +VPGD EGG E
Sbjct: 62  GDPGSRNVSDVNFPSDYTELLTQAKEAAESAFKDGKQLLEIEFPTAGLQTVPGDGEGGNE 121

Query: 124 MTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFED 183
           MTGSM LI EFCD FV  EK TRTR+FFPEANEV FAR+S FEG S KLDYLTKPS FED
Sbjct: 122 MTGSMLLIREFCDRFVPAEKATRTRVFFPEANEVSFARQSAFEGCSLKLDYLTKPSLFED 181

Query: 184 FGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDR 243
           FGFT KVKMADRVK +DE FLVAYPYFNVN +MLVVEELYKEAV  T+ KLIIFNGELDR
Sbjct: 182 FGFTTKVKMADRVKPQDETFLVAYPYFNVN-EMLVVEELYKEAVVGTSRKLIIFNGELDR 240

Query: 244 IRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSN-K 302
           IRSGYYP+FFYPKLA LSKT  P ++T+YYIHNFKG  GGTLFRCYP  WKVL+K S+  
Sbjct: 241 IRSGYYPAFFYPKLAELSKTFLPKLDTVYYIHNFKGAKGGTLFRCYPEPWKVLRKASSGN 300

Query: 303 YICLHQQEVMPSLKEVALDILPS 325
           Y+CLHQQE MPSLKEVALDILPS
Sbjct: 301 YVCLHQQEEMPSLKEVALDILPS 323

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2156504	316	AT5G48790 "AT5G48790" [Arabido	0.812	0.838	0.752	5.3e-104

TAIR|locus:2156504 AT5G48790 "AT5G48790" [Arabidopsis thaliana (taxid:3702)]

 Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
 Identities = 201/267 (75%), Positives = 223/267 (83%)

Query:    61 SVSSDGNNSINVD-VPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
             SVS   NN+ +VD VPFP DY EL++QAK A E+A+KD  +LMEIEFPT+GL SVPGD E
Sbjct:    51 SVSGGYNNNTSVDNVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSGLASVPGDGE 110

Query:   120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
             G  EMT S+ +I EFCD  + PEK   TRIFFPEANEVKFA+K+VF G  FKLDYLTKPS
Sbjct:   111 GATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPS 170

Query:   180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNG 239
              FEDFGF E+VKMADRVK EDELFLVAYPYFNVN +MLVVEELYKEAV NT  KLIIFNG
Sbjct:   171 LFEDFGFFERVKMADRVKPEDELFLVAYPYFNVN-EMLVVEELYKEAVVNTDRKLIIFNG 229

Query:   240 ELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKV 299
             ELDRIRSGYYP FFYPKLAAL+KTL P MET+YYIHNFKG+ GG LFRCYPG W+VL++ 
Sbjct:   230 ELDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYPGPWQVLRRT 289

Query:   300 SNKYICLHQQEVMPSLKEVALDILPSA 326
              NKYIC+HQQE MPSLKEVALDIL SA
Sbjct:   290 RNKYICVHQQESMPSLKEVALDILASA 316


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       326   0.00087  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  219 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.12u 0.21s 26.33t   Elapsed:  00:00:02
  Total cpu time:  26.12u 0.21s 26.33t   Elapsed:  00:00:02
  Start:  Tue May 21 00:57:39 2013   End:  Tue May 21 00:57:41 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015979 "photosynthesis" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
pfam09353	205	pfam09353, DUF1995, Domain of unknown function (DU	2e-36

>gnl|CDD|220198 pfam09353, DUF1995, Domain of unknown function (DUF1995)

 Score =  129 bits (327), Expect = 2e-36
 Identities = 59/248 (23%), Positives = 95/248 (38%), Gaps = 45/248 (18%)

Query: 76  FPSDYSELLDQAKMAAELAVKDGMK--LMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICE 133
            P+D  E  +QAK A   A+KDG     +E+ FP  GL            M  ++RL   
Sbjct: 1   LPADLEEAEEQAKEALLAALKDGKTRLQVELRFP--GLK----------LMPLALRLARA 48

Query: 134 FCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMA 193
                   E+  R  + FP+A     AR+  +   +FK+  L+     ED    +     
Sbjct: 49  LA------EEGRRLLVVFPDAGAAALARRD-WGDLAFKILSLSDRKLSEDESKID----- 96

Query: 194 DRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFF 253
                 D L LVA    ++  ++  + EL           +I+ N  L+   +       
Sbjct: 97  ------DILILVAPQPSDLE-EVEALCELAGGRP------VIMLNPRLED--AAAVG--I 139

Query: 254 YPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKVSNKYICLHQQEVMP 313
                   +      E  YY+   +   GG LFRCYPG W++ K+ +  Y  + + E  P
Sbjct: 140 GSVARERRRRFLSTWEVAYYLRPLER--GGALFRCYPGPWQLFKEDNGGYRLVAEFESRP 197

Query: 314 SLKEVALD 321
             +E+   
Sbjct: 198 DPEEIDAL 205

This family of proteins are functionally uncharacterized. Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF09353	209	DUF1995: Domain of unknown function (DUF1995); Int	100.0
PLN02842	505	nucleotide kinase	100.0

>PF09353 DUF1995: Domain of unknown function (DUF1995); InterPro: IPR018962 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=1.9e-49  Score=361.17  Aligned_cols=205  Identities=29%  Similarity=0.538  Sum_probs=174.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCeeEEEE--ecCCCCCCCCCCCccccccccchHHHHHHHhhhcCCCCCCceEEEecC
Q 020394           76 FPSDYSELLDQAKMAAELAVKDGMKLMEIE--FPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPE  153 (326)
Q Consensus        76 lP~s~~eav~qA~~Av~~AL~dG~~RleVE--fP~l~l~~~pGd~d~~~e~~~~~~la~~~~~~fl~~~~g~~vkv~fPD  153 (326)
                      ||.||+|+++||++|+++||++|.+|+.||  ||+++.              .+++++++|++.|  .+.|++++++|||
T Consensus         1 lP~s~~ea~~qA~~Av~~Al~~g~~r~~ve~~fP~l~~--------------~~~~la~~~~~~l--~~~~~~~~~~~pd   64 (209)
T PF09353_consen    1 LPSSLEEAVEQAAEAVQAALEDGDSRQLVELEFPGLNP--------------SNMPLAREFARKL--AASGRRVRVVFPD   64 (209)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEECCCcch--------------hHHHHHHHHHHHH--HhcCceEEEEcCC
Confidence            799999999999999999999999885555  998722              2699999999998  5688999999999


Q ss_pred             hhHHHHHhhhccCCcceeecccCCCccccccccccccccccccCCCCcEEEEEeeccCCcccHHHHHHHHHHHhhCCCce
Q 020394          154 ANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNGKMLVVEELYKEAVFNTAWK  233 (326)
Q Consensus       154 ageaalA~r~~~~g~~~~ld~l~~~~~f~~~g~~~~~~~~~~v~~~d~~~vvv~P~~~~~~el~~ve~l~~~a~~~~~rP  233 (326)
                      +|++++|+++ |++.++++.+++..         ...   ......|+++|+|+|++.   +++++|+||+.+   .+||
T Consensus        65 ~g~~alA~~~-~~~~~~~~~~l~~~---------~~~---~~~~~~~~~~vvv~p~~~---~l~~~e~~~~~~---~~rp  125 (209)
T PF09353_consen   65 AGEAALARRD-WGDGSFKIASLDDW---------SSS---EDESKFDDILVVVAPSPQ---ELDDVEKLCEAA---GGRP  125 (209)
T ss_pred             hHHHHHHhcc-ccCCCeEEeeccCc---------ccc---ccccccCCEEEEEECChh---hHHHHHHHHHhc---CCCe
Confidence            9999999998 99999888444322         110   000111689999999999   999999999875   6699


Q ss_pred             EEEEcCcccccc-CCCCCCcccHHHHHHHhhhcccceEEEEEeeeCCCCceEEEeEeCCccEEEEEe-CCeEEEEeeecC
Q 020394          234 LIIFNGELDRIR-SGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRCYPGSWKVLKKV-SNKYICLHQQEV  311 (326)
Q Consensus       234 vVl~Np~Ldd~~-~g~g~~~f~pk~R~lr~~FL~~fe~vYyL~pl~~~~~GaLfR~YPgpWqV~~~~-~g~y~lv~e~~~  311 (326)
                      +|||||+|++++ +|+|   |.  +|++|++|+++||+||||+|+.+...|+||||||||||||+++ +|+|+||+++++
T Consensus       126 vvl~Np~l~~~~~~g~g---~~--~r~~~~~Fl~~fe~vY~l~~l~~~~~gal~r~yP~~Wqv~~~~~~~~y~~v~~~~~  200 (209)
T PF09353_consen  126 VVLLNPQLEDVRSVGFG---FP--GRKLRERFLSSFETVYYLRPLRISGNGALFRCYPGPWQVFREDDDGEYECVAEFEE  200 (209)
T ss_pred             EEEEecccccCCccccc---cc--cHHHHHHHHhhceEEEEEEeeccCCcEEEEEeCCCCcEEEEEcCCCcEEEEEeccc
Confidence            999999999998 6655   33  5799999999999999999996533599999999999999999 899999999999


Q ss_pred             CCCHHHHHh
Q 020394          312 MPSLKEVAL  320 (326)
Q Consensus       312 RPs~~Ev~~  320 (326)
                      ||+++||+.
T Consensus       201 rP~~~e~~~  209 (209)
T PF09353_consen  201 RPTYEELEE  209 (209)
T ss_pred             CCChHHhhC
Confidence            999999974

>PLN02842 nucleotide kinase

Probab=100.00  E-value=7.2e-46  Score=375.07  Aligned_cols=212  Identities=19%  Similarity=0.207  Sum_probs=183.4

Q ss_pred             HHHHHHHHHHHHHcCCeeEEEE--ecCCCCCCCCCCCccccccccchHHHHHHHhhhcCCCCCCceEEEecC-hhHHHH-
Q 020394           84 LDQAKMAAELAVKDGMKLMEIE--FPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPE-ANEVKF-  159 (326)
Q Consensus        84 v~qA~~Av~~AL~dG~~RleVE--fP~l~l~~~pGd~d~~~e~~~~~~la~~~~~~fl~~~~g~~vkv~fPD-ageaal-  159 (326)
                      -++|.+||++|++||++|++||  ||+|+++     +|+|+ +++.++||++|+..|  ++.|++||||||| +|+++| 
T Consensus       244 ~~~~~~a~~~a~~~g~~r~~~~~~~pel~~~-----~~~~~-~~~~~~l~~~~~~~~--~~~~~~~kv~~~~~~g~~~~~  315 (505)
T PLN02842        244 YDDVLQATQRAVNDGRTRLKVEINIPELNPE-----MDVYR-IGTLMELVRVLALSF--ADDGKRVKVCVQGSMGEGALA  315 (505)
T ss_pred             HHHHHHHHHHHHhCCcceEEEEEecCccccc-----ccccc-chhHHHHHHHHHHHH--hhcCCceEEEecCCcchhHhc
Confidence            4689999999999999999998  9999996     67776 478899999999998  8999999999999 899999 


Q ss_pred             -------------HhhhccCCcceeecccCCCccccccccccccccccccCCCCcEEEEEeeccCCcc-cHHHHHHHHHH
Q 020394          160 -------------ARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNG-KMLVVEELYKE  225 (326)
Q Consensus       160 -------------A~r~~~~g~~~~ld~l~~~~~f~~~g~~~~~~~~~~v~~~d~~~vvv~P~~~~~~-el~~ve~l~~~  225 (326)
                                   |+++ |++.+++=       .|-.+|.++    ++.++++|++||+|+|++.|++ ++++||+||+.
T Consensus       316 ~~~~~~~~~~~~~~~~d-w~~~~~~~-------~~~~~~~~~----~~~~~~~d~~~i~v~P~~~v~~~~~~~~e~~~~~  383 (505)
T PLN02842        316 GMPLQLAGTRKILEFMD-WGDYGAKG-------TFVKIGAIG----AKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTA  383 (505)
T ss_pred             cCccccccchhhhhhcc-cccccccc-------cceeecccc----cCCCCCCCcEEEEEcCCccccccchHHHHHHHHH
Confidence                         9998 99988842       111222222    2567899999999999997765 99999999998


Q ss_pred             HhhCCCceEEEEcCcccccc----CC-CCCCcccHHHHHHHhhhcccceEEEEEeeeCCC-----CceEEEeEeCCccEE
Q 020394          226 AVFNTAWKLIIFNGELDRIR----SG-YYPSFFYPKLAALSKTLFPVMETIYYIHNFKGR-----NGGTLFRCYPGSWKV  295 (326)
Q Consensus       226 a~~~~~rPvVl~Np~Ldd~~----~g-~g~~~f~pk~R~lr~~FL~~fe~vYyL~pl~~~-----~~GaLfR~YPgpWqV  295 (326)
                      +   ++|||||+||||+|+.    +| +.       +|++|++|+++||+||||+|+...     .+|||+|+||++|||
T Consensus       384 ~---~~rpvillnp~LeD~~~~vGig~~~-------~R~~R~~f~~t~~~~Y~~~~l~~~~~~~~~~gal~~~yp~~w~l  453 (505)
T PLN02842        384 A---GKRPVILVNPRLKDLPGSSGIMQTM-------GREQRLEYAASFENCYSFRLLYYAGTQYPIMGALRMSYPYRYEL  453 (505)
T ss_pred             h---CCCeEEEECCcccccccccchhHHH-------HHHHHHHHHHHhhheeEEEeccccccccccceeeeecCCCCeeE
Confidence            6   8999999999999974    44 44       999999999999999999998542     359999999999999


Q ss_pred             EEEeC-----CeEEEEeeecCCCCHHHHHhhhCCC
Q 020394          296 LKKVS-----NKYICLHQQEVMPSLKEVALDILPS  325 (326)
Q Consensus       296 ~~~~~-----g~y~lv~e~~~RPs~~Ev~~~ll~~  325 (326)
                      |++++     ++|+++++|++||+.+||+..|+|.
T Consensus       454 ~~~~~~~~~~~~y~~~~~~~~~P~~e~i~~~~~~~  488 (505)
T PLN02842        454 YKRVDEENGKEKYIILATFSERPTPDEINDAFSGR  488 (505)
T ss_pred             EEecCccccCcceEEeeecCCCCCHHHHHHHhCCC
Confidence            98753     5999999999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	326
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 46/422 (10%), Positives = 104/422 (24%), Gaps = 169/422 (40%)

Query: 43  QRIITFSPYRRKHSCLTNSVS--SDGNNSINVDVPFPSDYSEL---LDQAKMAAELAVKD 97
           Q  +    Y  +   L N     +  N      V     Y +L   L + + A  + + D
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYN------VSRLQPYLKLRQALLELRPAKNVLI-D 156

Query: 98  GMK------L---------MEIEFP------TAGLDSVPGDSEGGIEMTGSM--RLICEF 134
           G+       +         ++ +             + P      +EM   +  ++   +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV---LEMLQKLLYQIDPNW 213

Query: 135 CDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFK-----LDYLTKPSFFEDFGF--- 186
                  +  +  ++     + ++   + + +   ++     L  +     +  F     
Sbjct: 214 TSR---SDHSSNIKL---RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 187 ----TEKVKMAD--------RVKLED-----------ELFLVAYPYFNVNGKMLVVEELY 223
               T   ++ D         + L+             L L    Y +        ++L 
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL---KYLDCR-----PQDLP 319

Query: 224 KEAVFNTAWKLIIFNGELDR---IRSGYYPSFFYPKLAALSKT----------------- 263
           +E +     +L I   E  R        +      KL  + ++                 
Sbjct: 320 REVLTTNPRRLSII-AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 264 -LFP--------VMETI------------------------------YYIHN------FK 278
            +FP        ++  I                                I +       K
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438

Query: 279 GRNGGTL----------FRCYPGSWKVLKKVSNKYICLH---------QQEVMPSLKEVA 319
             N   L           + +  S  ++    ++Y   H           E M   + V 
Sbjct: 439 LENEYALHRSIVDHYNIPKTFD-SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 320 LD 321
           LD
Sbjct: 498 LD 499

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00