Citrus Sinensis ID: 020434

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI
Secondary Structure (PSIPRED)
ccccccHHHccccHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHccccccccHHHHHHccccccEEEEEccccEEEccEEEccccccccccccccccccccccccccEEEEEEEEcccccccccccHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHEHcHHHccccHHHccccccccccccccccccHHHccccccccccccccccccccccccHccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccEEEEEEEccccHHHHHHHHHccccHcHHHHHHcccccccEEEEEcccccEEEEEEEccccccccccHHccccccccccccccEEEEEEEEccccccHHHHHHHHHccccccEEEEccccccc
Coil and Loop (DISEMBL)
MENNQQSFWQFSDQLRVQASNLanlslndsiwsnnygskrpderknfdirvggqvnvnpftkgsdlnafddgyksmssnyndiglgpigqimapasasqknvginggfnkgiyskpghfglstintnnnnninSYMNVNLkgnrnreendhhglgsksgkknsnkknnnkdgdnnsdnkdtkTAADkrfktlppsealprnetigGYIFVCNNDTMAENLKRqlfglppryrdsvraitpglplFLYNYSTHQLHGIFeaasfggtnidptawedkkcpgesrfpaQVRVVTRKIcepleedsfrpilhhydgpkfrlelnvpevi
Flexible Loop (DISEMBL)
MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGqvnvnpftkgsdLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNREENDhhglgsksgkknsnkknnnkdgdnnsdnkdtktaadkrfktlppsealprnetIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWedkkcpgesrfpaqvRVVTRKICepleedsfrpilhhydgpkfrlelnvpevi
Low Complexity Region (SEG)
MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLStintnnnnninSYMNVNLKGNRNREENDHHGLgsksgkknsnkknnnkdgdnnsdnkdTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI
Disordered region (IsUnstruct)
********WQFSDQLRVQASNLANLSLNDSIWSN************FDIRVGGQVNVNPFTKGSDLNAFDDGY*****NYNDIGLGPIGQIMA*******NVGINGGFNKGIYSK**************************************************************************************ETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLE*******
Disordered Region (DISOPRED)
*****QS*WQFSDQLRVQASN**************************************************************************************************************************************************************************************IGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAW**********FPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVP***
Disordered Region (DISEMBL)
MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNRE******************KNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI
Disordered Region (DISPRO)
*****QSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPD*RKNFDIRVGGQVNV***TKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNNINSY*******************************************************T**P*EALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELN*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	326	2.2.26 [Sep-21-2011]
P37707	207	B2 protein OS=Daucus caro	N/A	no	0.450	0.710	0.891	6e-77

>sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1

 Score =  287 bits (735), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 131/147 (89%), Positives = 139/147 (94%)

Query: 180 DTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAIT 239
           + K   +KRFKTLPP+E+LPRNET+GGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAIT
Sbjct: 50  ENKNGVEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAIT 109

Query: 240 PGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPL 299
           PGLPLFLYNYSTHQLHG+FEAASFGGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPL
Sbjct: 110 PGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPL 169

Query: 300 EEDSFRPILHHYDGPKFRLELNVPEVI 326
           EEDSFRPILHHYDGPKFRLELN+PE I
Sbjct: 170 EEDSFRPILHHYDGPKFRLELNIPEAI 196


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.133    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,211,434
Number of Sequences: 539616
Number of extensions: 6495699
Number of successful extensions: 108457
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 22349
Number of HSP's gapped (non-prelim): 25076
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Daucus carota (taxid: 4039)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
224075130	364	predicted protein [Populus trichocarpa]	0.932	0.835	0.589	1e-108
363806694	328	uncharacterized protein LOC100796450 [Gl	0.926	0.920	0.652	1e-108
449462519	371	PREDICTED: uncharacterized protein LOC10	0.950	0.835	0.603	1e-107
358249330	330	uncharacterized protein LOC100808989 [Gl	0.920	0.909	0.671	1e-102
388497918	340	unknown [Lotus japonicus]	0.938	0.9	0.636	1e-101
351726918	368	N-rich protein [Glycine max] gi|57898928	0.990	0.877	0.6	4e-97
388520073	331	unknown [Medicago truncatula]	0.917	0.903	0.636	6e-97
255645695	368	unknown [Glycine max]	0.990	0.877	0.597	1e-96
356547527	363	PREDICTED: uncharacterized protein LOC10	0.932	0.837	0.587	7e-96
297805420	340	hypothetical protein ARALYDRAFT_493778 [	0.929	0.891	0.585	1e-92

>gi|224075130|ref|XP_002304564.1| predicted protein [Populus trichocarpa] gi|222841996|gb|EEE79543.1| predicted protein [Populus trichocarpa]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/375 (58%), Positives = 260/375 (69%), Gaps = 71/375 (18%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVN---- 56
           MENN+QSF+QFSDQLRVQ  NL NLSLNDSIWSN++GSKRPD+R+NFDIRVG +VN    
Sbjct: 1   MENNRQSFYQFSDQLRVQTPNLGNLSLNDSIWSNSFGSKRPDQRRNFDIRVGAEVNNLKQ 60

Query: 57  ----VNPFT-----------------------------------------KGSDLNAFDD 71
               +N F                                          KGSDLN F+D
Sbjct: 61  KGSDLNSFNDGWNPIRSNLNLFNEGWNSVNDLKPKGSNLNVFNDVYNLKPKGSDLNVFND 120

Query: 72  GYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPGHFGLSTINTNNNNN 131
           G+K M S+ N+ G+ PIG +      S KN+G+NGGF+ GIYSK            NNN 
Sbjct: 121 GWK-MGSSANNYGVSPIGPMGQVVGGSHKNLGVNGGFSNGIYSK------------NNNI 167

Query: 132 INSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKT 191
            N+ +N+++KG++N+ ++D      K      +           +DN D K+AADKRFKT
Sbjct: 168 HNNNLNISVKGSKNKGDDDFGSKSGKKNSNKKSNS---------NDNNDNKSAADKRFKT 218

Query: 192 LPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYST 251
           LPPSE+LPR ETIGGYIFVCNNDTMAENLKR+LFGLPPRYRDSVR ITPGLPLFLYNYST
Sbjct: 219 LPPSESLPRYETIGGYIFVCNNDTMAENLKRELFGLPPRYRDSVRQITPGLPLFLYNYST 278

Query: 252 HQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHY 311
           HQLHG+FEAASFGGTNIDP+AWEDKKC GESRFPAQVRV+TRK+CEPLEEDSFRP+LHHY
Sbjct: 279 HQLHGVFEAASFGGTNIDPSAWEDKKCLGESRFPAQVRVMTRKVCEPLEEDSFRPVLHHY 338

Query: 312 DGPKFRLELNVPEVI 326
           DGPKFRLELN+PE +
Sbjct: 339 DGPKFRLELNIPEAL 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806694|ref|NP_001242010.1| uncharacterized protein LOC100796450 [Glycine max] gi|255634801|gb|ACU17761.1| unknown [Glycine max]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/331 (65%), Positives = 247/331 (74%), Gaps = 29/331 (8%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPF 60
           MENN QSFWQFSDQLR+QASNLANLSLNDSIWSN+Y SKR DER NFDI+VGG++N    
Sbjct: 1   MENNNQSFWQFSDQLRLQASNLANLSLNDSIWSNSYISKRRDERINFDIKVGGEIN---- 56

Query: 61  TKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPAS----ASQKNVGINGGFNKGIYSKP 116
                  +F    K  + +YN+   G +  +  P +         VG+NGGFNKGIYSKP
Sbjct: 57  -------SFKS--KEPACDYNENMNGSL--LAVPYNNNNILGVGGVGLNGGFNKGIYSKP 105

Query: 117 GHFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNS 176
           G   L+     N N          KG++ ++E++       S +K +     +    NN 
Sbjct: 106 GFANLNNNINLNINP---------KGHKFKDEDELFHPSKPSQEKTTTSTKKHGGNTNND 156

Query: 177 DN-KDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSV 235
           DN KD+K A DKRFKTLPP+E+LPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSV
Sbjct: 157 DNSKDSKAAGDKRFKTLPPAESLPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSV 216

Query: 236 RAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKI 295
           RAITPGLPLFLYNYSTHQLHGIFEAASFGG+N+DP+AWEDKKCPGESRFPAQVRV+TRK 
Sbjct: 217 RAITPGLPLFLYNYSTHQLHGIFEAASFGGSNVDPSAWEDKKCPGESRFPAQVRVITRKT 276

Query: 296 CEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           CEPLEEDSFRPILHHYDGPKFRLELNVPE +
Sbjct: 277 CEPLEEDSFRPILHHYDGPKFRLELNVPEAL 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462519|ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208173 [Cucumis sativus] gi|449506207|ref|XP_004162682.1| PREDICTED: uncharacterized LOC101208173 [Cucumis sativus]

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/376 (60%), Positives = 257/376 (68%), Gaps = 66/376 (17%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVN---- 56
           MENN QSF QFSDQLRVQ  NLANLSLNDSIWSN+Y SKRP+ER+NFD+R GG+VN    
Sbjct: 1   MENNPQSFRQFSDQLRVQTGNLANLSLNDSIWSNSYVSKRPEERRNFDVRNGGEVNSLNN 60

Query: 57  ---------VNPFTKG---------SD----------------------LNAFDDGYKSM 76
                    VN F  G         SD                      LN FD+G+ S 
Sbjct: 61  FKPKVSDSDVNRFNDGWNSFKPSVASDLNNWSNTSNSMNLSSTGYEKNALNVFDNGWNSF 120

Query: 77  SSNYNDIGLGPIGQIMAPASASQKNV------GINGGFNKGIYSKPGHFGLSTINTNNNN 130
            S  +D      G  +  A+     V      GINGGFNKG+YSK G+F           
Sbjct: 121 KSKGSDFNAFNDGWKLNSANMGVDPVIGGAQKGINGGFNKGVYSKIGNF----------- 169

Query: 131 NINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFK 190
           N NS++N+    N  + E +    G K+GKKNSNK N+ ++ ++N +    K A DKRFK
Sbjct: 170 NSNSFVNLKNYKNSGKVEEEK---GGKTGKKNSNKNNSGENNNDNKE--ANKNALDKRFK 224

Query: 191 TLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYS 250
           TLPPSE+LPRNETIGGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLP+FLYNYS
Sbjct: 225 TLPPSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYS 284

Query: 251 THQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHH 310
           THQLHGIFEAASFGGTNIDPTAWEDKK PGESRFPAQVR+VTRKIC+PLEEDSFRPILHH
Sbjct: 285 THQLHGIFEAASFGGTNIDPTAWEDKKTPGESRFPAQVRIVTRKICDPLEEDSFRPILHH 344

Query: 311 YDGPKFRLELNVPEVI 326
           YDGPKFRLELN+PE +
Sbjct: 345 YDGPKFRLELNIPEAL 360

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249330|ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycine max] gi|255637142|gb|ACU18902.1| unknown [Glycine max]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/335 (67%), Positives = 249/335 (74%), Gaps = 35/335 (10%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPF 60
           MENN QSFWQFSDQLR+QASNLANLSLNDSIWSNNY SKR DER NFDI+VGG++N    
Sbjct: 1   MENNNQSFWQFSDQLRLQASNLANLSLNDSIWSNNYISKRRDERINFDIKVGGEIN---- 56

Query: 61  TKGSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGI---------NGGFNKG 111
                  +F    K  + +YND      G ++A    +  N  I         NGGFNKG
Sbjct: 57  -------SFKS--KDPACDYND---NVNGSLLAMPYNNNNNNNIILGFGGVGLNGGFNKG 104

Query: 112 IYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKD 171
           IYSKP    L+     N N          KG++ + E D     SKS KKN+N    + D
Sbjct: 105 IYSKPAFANLNNNINLNINP---------KGHKGKVE-DELFHPSKSSKKNNNLNKKHGD 154

Query: 172 GDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRY 231
            +NN +NKD+K A DKRFKTLPPSE+LPR+ETIGGYIFVCNNDTMAENLKRQLFGLPPRY
Sbjct: 155 NNNNDNNKDSKAAGDKRFKTLPPSESLPRDETIGGYIFVCNNDTMAENLKRQLFGLPPRY 214

Query: 232 RDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVV 291
           RDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDP+AWEDKKCPGESRFPAQVRV+
Sbjct: 215 RDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPSAWEDKKCPGESRFPAQVRVI 274

Query: 292 TRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           TRK CEPLEEDSFRPILHHYDGPKFRLELNVPE +
Sbjct: 275 TRKTCEPLEEDSFRPILHHYDGPKFRLELNVPEAL 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497918|gb|AFK37025.1| unknown [Lotus japonicus]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/330 (63%), Positives = 241/330 (73%), Gaps = 24/330 (7%)

Query: 4   NQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTKG 63
           N+QSFWQFSDQLRVQAS LANLSLNDSIWSNNY SKRPD+R+NFD   G    V+     
Sbjct: 7   NEQSFWQFSDQLRVQASGLANLSLNDSIWSNNYTSKRPDQRRNFDAS-GVNGVVDHHHHH 65

Query: 64  SDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGF--NKGIYSKPGHFGL 121
            + N+F +     +S++ND G   +      ++ S  ++  N     NKGIYS       
Sbjct: 66  VNNNSFTNFISKPNSDFNDGGWKMMNTSSNSSNGSLFSMPHNNNIITNKGIYS------- 118

Query: 122 STINTNNNNNINSYMNVNLKGNR---NREENDHHGLGSKSGKKNSNKKNNN--KDGDNNS 176
                  N NIN  MN NLKG +   N +  D      KS +KN+N  NN+  K GDNN+
Sbjct: 119 -------NTNINLDMNNNLKGYKSGFNFKGGDEF-YPPKSARKNTNNHNNSSYKHGDNNN 170

Query: 177 DNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVR 236
            +  TKT A+KRFKTLP SE+LPRNET+GGYIFVCNNDTMAENL+RQ FGLPPRYRDSVR
Sbjct: 171 SDV-TKTGAEKRFKTLPQSESLPRNETVGGYIFVCNNDTMAENLRRQFFGLPPRYRDSVR 229

Query: 237 AITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKIC 296
           +ITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKC GESRFPAQV+V+TRKIC
Sbjct: 230 SITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCIGESRFPAQVQVITRKIC 289

Query: 297 EPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           EPLEEDSFRPILHHYDGPKFRLE +V E +
Sbjct: 290 EPLEEDSFRPILHHYDGPKFRLEPSVAEAL 319

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726918|ref|NP_001236375.1| N-rich protein [Glycine max] gi|57898928|emb|CAI44933.1| N-rich protein [Glycine max]

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 210/350 (60%), Positives = 248/350 (70%), Gaps = 27/350 (7%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLND-SIWSNNYGSKRPDERKNFDIRVGGQVNVNP 59
           M+NN   FW+FSDQLR++ S LANLSLND SIWSN+Y SKRPD+R+NFD++     N N 
Sbjct: 1   MDNNND-FWKFSDQLRLE-SGLANLSLNDYSIWSNSYSSKRPDQRRNFDVKGSDFNNNNN 58

Query: 60  FTKGSDLNAFDDGYK---------SMSSNYNDIGLGPIGQIMAPASASQKNVGIN----- 105
            +K  D + F+DG+K         SM  N N+  L   G        S  N  I+     
Sbjct: 59  SSKAFD-DDFNDGWKITNSNGPLFSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPN 117

Query: 106 -------GGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRN--REENDHHGLGS 156
                  GGFNKGIYS          N ++ ++ N+    NLKG +   + E+  H   S
Sbjct: 118 NLNNNAFGGFNKGIYSNTTSSPYLNNNHHHLDDNNNLNRNNLKGYKTYFKGEDQFHTPKS 177

Query: 157 KSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTM 216
              K  +N  NN K GDN ++N  TKT A+K+FKTLPPSE+LP+NETIGGYIFVCNNDTM
Sbjct: 178 AKKKNTTNNTNNKKHGDNTNNNDGTKTGAEKKFKTLPPSESLPKNETIGGYIFVCNNDTM 237

Query: 217 AENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDK 276
           AENL+RQLFGLPPRYRDSVR ITPGLP+FLYNYSTHQLHGIFEAASFGG+NIDPTAWEDK
Sbjct: 238 AENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDK 297

Query: 277 KCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           KCPGESRFPAQV+V+TRK+CEPLEEDSFRPILHHYDGPKFRLEL+VPE +
Sbjct: 298 KCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFRLELSVPEAL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520073|gb|AFK48098.1| unknown [Medicago truncatula]

 Score =  360 bits (923), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 210/330 (63%), Positives = 237/330 (71%), Gaps = 31/330 (9%)

Query: 3   NNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPFTK 62
           NN+ SFWQFSDQLR Q SNLA+LSLNDSIWS N  +KRPD+R+NFD++    +N N FT 
Sbjct: 6   NNENSFWQFSDQLRHQTSNLASLSLNDSIWSTNM-TKRPDQRRNFDVK-NSDIN-NSFTN 62

Query: 63  -----GSDLNAFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNKGIYSKPG 117
                 SDLN   DG+K M+++      GP+       S    N     GFNKGIYS P 
Sbjct: 63  FNSKPSSDLN---DGWKMMNNSN-----GPL------FSMPHNNNSSFAGFNKGIYSSP- 107

Query: 118 HFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSD 177
                 +N  NNN  N             +  D   LG+K  KKN N  NN      + D
Sbjct: 108 -----YVNNLNNNTNNLSNINLNGYKSGFKVGDEFQLGNKGVKKNINNNNNINK--KHGD 160

Query: 178 NKDT-KTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVR 236
           N D  KT+ADK+FKTLPPSE+LPRNETIGGYIFVCNNDTMAENLKRQ+FGLPPRYRDSVR
Sbjct: 161 NTDVAKTSADKKFKTLPPSESLPRNETIGGYIFVCNNDTMAENLKRQIFGLPPRYRDSVR 220

Query: 237 AITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKIC 296
            ITPGLPLFLYNYSTHQLHGIFEAASFGG+NIDPTAWEDKKCPGESRFPAQV+V+TRK+C
Sbjct: 221 TITPGLPLFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVC 280

Query: 297 EPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           EPLEEDSFRPILHHYDGPKFRLEL+V E +
Sbjct: 281 EPLEEDSFRPILHHYDGPKFRLELSVSEAL 310

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645695|gb|ACU23341.1| unknown [Glycine max]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 209/350 (59%), Positives = 247/350 (70%), Gaps = 27/350 (7%)

Query: 1   MENNQQSFWQFSDQLRVQASNLANLSLND-SIWSNNYGSKRPDERKNFDIRVGGQVNVNP 59
           M+NN   FW+FSDQLR++ S LANLSLND SIWSN+Y SKRPD+R+NFD++     N N 
Sbjct: 1   MDNNND-FWKFSDQLRLE-SGLANLSLNDYSIWSNSYSSKRPDQRRNFDVKGSDFNNNNN 58

Query: 60  FTKGSDLNAFDDGYK---------SMSSNYNDIGLGPIGQIMAPASASQKNVGIN----- 105
            +K  D + F+DG+K         SM  N N+  L   G        S  N  I+     
Sbjct: 59  SSKAFD-DDFNDGWKITNSNGPLFSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPN 117

Query: 106 -------GGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRN--REENDHHGLGS 156
                  GGFNKGIYS          N ++ ++ N+    NLKG +   + E+  H   S
Sbjct: 118 NLNNNAFGGFNKGIYSNTTSSPYLNNNHHHLDDNNNLNRNNLKGYKTYFKGEDQFHTPKS 177

Query: 157 KSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTM 216
              K  +N  NN K GDN ++N  TKT A+K+FKTLPPSE+LP+NETIGGYIFVCNNDTM
Sbjct: 178 AKKKNTTNNTNNKKHGDNTNNNDGTKTGAEKKFKTLPPSESLPKNETIGGYIFVCNNDTM 237

Query: 217 AENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDK 276
           AENL+RQLFGLPPRYRDSVR ITPGLP+FLYNYSTHQLHGIFEAASFGG+NIDPTAWEDK
Sbjct: 238 AENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDK 297

Query: 277 KCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           KCPGESRFPAQV+V+TRK+CEPLEEDSFRPI HHYDGPKFRLEL+VPE +
Sbjct: 298 KCPGESRFPAQVQVITRKVCEPLEEDSFRPIFHHYDGPKFRLELSVPEAL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547527|ref|XP_003542163.1| PREDICTED: uncharacterized protein LOC100785849 [Glycine max]

 Score =  356 bits (914), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 214/364 (58%), Positives = 249/364 (68%), Gaps = 60/364 (16%)

Query: 1   MEN-NQQSFWQFSDQLRVQASNLANLSLND-SIWSNNYGSKRPDERKNFDIRVGGQVNVN 58
           M+N N   FW+FSDQLR++ S LANLSLND SIWSN+Y SKRPD+R+NFD+         
Sbjct: 1   MDNYNSNDFWKFSDQLRLE-SGLANLSLNDYSIWSNSYSSKRPDQRRNFDV--------- 50

Query: 59  PFTKGSDLN--------AFDDGYKSMSSNYNDIGLGPIGQIMAPASASQKNVGINGGFNK 110
              KGSD N         F+DG+K  +SN      GP+  +  P + +   + + GGFNK
Sbjct: 51  ---KGSDFNNSSKPFDDDFNDGWKITNSN------GPLFSM--PHNNNTHTLEV-GGFNK 98

Query: 111 G-IYSKPGHFGLSTINTNNNN----NINSYMNVN-----------------------LKG 142
           G IYS          N NNN     N   Y N                         LKG
Sbjct: 99  GGIYSNTNTTSSLYPNLNNNTLGGFNKGIYSNTTSSPYLNLNNNNNNHLNNNLNSNNLKG 158

Query: 143 NRNREENDHHGLGSKSGKKNSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNE 202
            +   + +      KS KKNS+  NN K GDN ++N+ TKTAA+K+FKTLPPSE+LP+NE
Sbjct: 159 YKTFFKGEDQFHTPKSAKKNSSNNNNKKHGDNTNNNEATKTAAEKKFKTLPPSESLPKNE 218

Query: 203 TIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAAS 262
           TIGGYIFVCNNDTMAENL+RQLFGLPPRYRDSVR ITPGLPLFLYNYSTHQLHGIFEAAS
Sbjct: 219 TIGGYIFVCNNDTMAENLQRQLFGLPPRYRDSVRTITPGLPLFLYNYSTHQLHGIFEAAS 278

Query: 263 FGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNV 322
           FGG+NIDPTAWEDKKCPGESRFPAQV+V+TRK+CEPLEEDSFRPILHHYDGPKFRLEL+V
Sbjct: 279 FGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFRLELSV 338

Query: 323 PEVI 326
           PE +
Sbjct: 339 PEAL 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805420|ref|XP_002870594.1| hypothetical protein ARALYDRAFT_493778 [Arabidopsis lyrata subsp. lyrata] gi|297316430|gb|EFH46853.1| hypothetical protein ARALYDRAFT_493778 [Arabidopsis lyrata subsp. lyrata]

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 202/345 (58%), Positives = 233/345 (67%), Gaps = 42/345 (12%)

Query: 3   NNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVN--VNPF 60
           NNQQSFWQFSDQLRVQ  NLANLSLNDSIWS N   K   ER+N DI      N  ++ +
Sbjct: 6   NNQQSFWQFSDQLRVQTPNLANLSLNDSIWSTNSVFK---ERRNLDIAATADKNNQIDYY 62

Query: 61  TKGSDLNAFDDGY--KSMSSNYNDIGLG-------------PIGQIMAPASASQK----N 101
            K +  +  +  +  KS  SN ND+GLG             PI +   P + + K    N
Sbjct: 63  QKKTISDNINSNWNWKSSGSN-NDMGLGFGPVGSKSTVDFNPIDKFNTPFNDTWKFNSVN 121

Query: 102 VGINGGFNKGIYSKPGHFGLSTINTNNNNNINSYMNVNLKGNRNREENDHHGLGSKSGKK 161
           V +NG FNKG+Y+    +G +    NNNN                 + DH     + G K
Sbjct: 122 VNVNGDFNKGVYTSMNKYGYNVNLKNNNNKNKGI------------DEDHQ---IQKGGK 166

Query: 162 NSNKKNNNKDGDNNSDNKDTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLK 221
            + K   N +   N D+K+     DKRFKTLPP+EALPRNETIGGYIFVCNNDTM ENLK
Sbjct: 167 KNRKNYQNNNNQRNEDDKNN--GVDKRFKTLPPAEALPRNETIGGYIFVCNNDTMEENLK 224

Query: 222 RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGE 281
           RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGI+EAASFGGTNI+  A+EDKKCPGE
Sbjct: 225 RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFGGTNIELNAFEDKKCPGE 284

Query: 282 SRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
           SRFPAQVR +TRK+C PLEEDSFRPILHHYDGPKFRLEL+VPEV+
Sbjct: 285 SRFPAQVRAITRKVCLPLEEDSFRPILHHYDGPKFRLELSVPEVL 329

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2165765	349	AT5G42050 "AT5G42050" [Arabido	0.957	0.893	0.568	2.6e-86
TAIR|locus:2091965	296	AT3G27090 "AT3G27090" [Arabido	0.438	0.483	0.839	6.8e-71
TAIR|locus:2149835	656	AT5G01660 "AT5G01660" [Arabido	0.358	0.178	0.441	5.1e-21
TAIR|locus:2085492	607	AT3G11000 [Arabidopsis thalian	0.352	0.189	0.466	1.4e-19
TAIR|locus:2156141	738	AT5G61910 "AT5G61910" [Arabido	0.368	0.162	0.371	1.3e-16
TAIR|locus:2059406	691	AT2G32910 "AT2G32910" [Arabido	0.368	0.173	0.395	1.2e-14
TAIR|locus:2063424	879	AT2G35140 "AT2G35140" [Arabido	0.355	0.131	0.393	1.1e-13

TAIR|locus:2165765 AT5G42050 "AT5G42050" [Arabidopsis thaliana (taxid:3702)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 196/345 (56%), Positives = 221/345 (64%)

Query:     3 NNQQSFWQFSDQLRVQASNLANLSLNDSIWSNNYGSKRPDERKNFDIRVGGQVNVNPF-- 60
             NNQQSFWQFSDQLRVQ  NLANLSLNDSIWS N   K   ER+N DI      N N    
Sbjct:     6 NNQQSFWQFSDQLRVQTPNLANLSLNDSIWSTNSVFK---ERRNLDIAATTDKNNNQIDY 62

Query:    61 ----TKGSDLNAFDDGYKSMSSNYNDIGLG-------------PIGQIMAPASASQKNVG 103
                 T   ++N+ +  +KS  SN ND+GLG             PI +  +P + + K   
Sbjct:    63 YQKKTTSDNINS-NWNWKSSGSN-NDMGLGFGPVGSKSTVDLNPIDKFNSPFNDTWKFNS 120

Query:   104 INGGFNKGIYSKPGHFGLSXXXXXXXXXXXSY-MNVNLKGN-RNREENDHHGLXXXXXXX 161
             +N   N G YS P                  Y  NVNLK N +N+  ++ H +       
Sbjct:   121 VNVNVN-G-YS-PSSAVNGDFNKGVYTSMKKYGYNVNLKNNNKNKGIDEDHQIQKGGKKN 177

Query:   162 XXXXXXXXXXXXXXXXXXXTKTAADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLK 221
                                     DKRFKTLPP+EALPRNETIGGYIFVCNNDTM ENLK
Sbjct:   178 RKNQQNNNNQRNEDDK----NNGLDKRFKTLPPAEALPRNETIGGYIFVCNNDTMEENLK 233

Query:   222 RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGE 281
             RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGI+EAASFGGTNI+  A+EDKKCPGE
Sbjct:   234 RQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFGGTNIELNAFEDKKCPGE 293

Query:   282 SRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEVI 326
             SRFPAQVR +TRK+C PLEEDSFRPILHHYDGPKFRLEL+VPEV+
Sbjct:   294 SRFPAQVRAITRKVCLPLEEDSFRPILHHYDGPKFRLELSVPEVL 338

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2091965 AT3G27090 "AT3G27090" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
 Identities = 120/143 (83%), Positives = 130/143 (90%)

Query:   184 AADKRFKTLPPSEALPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLP 243
             A DKRFKTLP SE LPRNE +GGYIFVCNNDTM E++KR LFGLPPRYRDSVRAITPGLP
Sbjct:   142 AVDKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDMKRHLFGLPPRYRDSVRAITPGLP 201

Query:   244 LFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDS 303
             LFLYNY+THQLHGIFEA +FGGTNID TAWEDKKC GESRFPAQVR+  RKIC+ LEEDS
Sbjct:   202 LFLYNYTTHQLHGIFEATTFGGTNIDATAWEDKKCKGESRFPAQVRIRVRKICKALEEDS 261

Query:   304 FRPILHHYDGPKFRLELNVPEVI 326
             FRP+LHHYDGPKFRLEL+VPE +
Sbjct:   262 FRPVLHHYDGPKFRLELSVPETL 284

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2149835 AT5G01660 "AT5G01660" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.1e-21, P = 5.1e-21
 Identities = 53/120 (44%), Positives = 70/120 (58%)

Query:   204 IGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASF 263
             +GG +F C  +T+ E + +QLFGLP  +   V+ I  GLPLFL+NYS   LHGIFEAA  
Sbjct:    18 LGGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGC 77

Query:   264 GGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPIL--HHYDGPKFRLELN 321
             G  N DP  W        S +PAQV +  R  CEPL E+ F+P +  ++Y    F  EL+
Sbjct:    78 GQLNFDPYGWTSDGSERTS-YPAQVPISVRLQCEPLSEEKFKPAIADNYYSSHHFWFELD 136

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

TAIR|locus:2085492 AT3G11000 [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 55/118 (46%), Positives = 69/118 (58%)

Query:   206 GYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGG 265
             G IF C   T+ E   + LFGLP  +   ++ I PGL LFL+NYS   LHGIFEAAS G 
Sbjct:   132 GVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASEGK 191

Query:   266 TNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPIL-HHYDGPK-FRLELN 321
              NID  AW        S +PAQV+V  R  CEPL E+ F P++  +Y+  K F  EL+
Sbjct:   192 LNIDSKAWSPNGTD-PSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELD 248

GO:0005634 "nucleus" evidence=ISM

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0031540 "regulation of anthocyanin biosynthetic process" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

TAIR|locus:2156141 AT5G61910 "AT5G61910" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 49/132 (37%), Positives = 80/132 (60%)

Query:   198 LPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGI 257
             L  +E + GYIF+CN  T  +  + ++FG+P   +D V +I PG+ LFLY++    L+G+
Sbjct:    55 LDHHEQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGV 114

Query:   258 FEAASFGGTNIDPTAWEDKKCPGESRFPAQV--RVVTRKICEPLEEDSFRPILH-HYDGP 314
             +EA   G  +I+P A+E K       +PAQV  R+V    C PL E++F+  ++ +Y G 
Sbjct:   115 YEATVGGRLDIEPEAFEGK-------YPAQVGFRIVMN--CLPLTENTFKSAIYENYKGS 165

Query:   315 KFRLELNVPEVI 326
             KF+ EL+  +V+
Sbjct:   166 KFKQELSPHQVM 177

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059406 AT2G32910 "AT2G32910" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 51/129 (39%), Positives = 71/129 (55%)

Query:   199 PRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIF 258
             P    IGG IF+CN  T  +  +  + G+  + +D V+ I PGL LFLY+Y    L+GIF
Sbjct:   314 PGKVKIGGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIF 373

Query:   259 EAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRP-ILHHYDGP-KF 316
             EA+S GG  ++  A+      G S FPAQVR      C PL E  F+  I+ +Y+   KF
Sbjct:   374 EASSAGGMKLERNAF------GGS-FPAQVRFKVFSDCIPLAESQFKKAIIENYNNKNKF 426

Query:   317 RLELNVPEV 325
             + EL   +V
Sbjct:   427 KTELTHKQV 435

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2063424 AT2G35140 "AT2G35140" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 48/122 (39%), Positives = 68/122 (55%)

Query:   206 GYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGG 265
             G IF+ NN T  E L R+LFGLP      V+ +  G+ LFL+ +   +LHG+F+A S G 
Sbjct:    23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82

Query:   266 TNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILH-HYDGP-KFRLELNVP 323
              NI+P A+      G+ +FPAQV+   +  C PL E  F   +H +Y  P KF   L+  
Sbjct:    83 INIEPNAFRSS---GK-QFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKA 138

Query:   324 EV 325
             +V
Sbjct:   139 QV 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.136   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       289   0.00088  115 3  11 22  0.42    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  222 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.21u 0.06s 22.27t   Elapsed:  00:00:28
  Total cpu time:  22.21u 0.06s 22.27t   Elapsed:  00:00:28
  Start:  Thu May  9 13:38:48 2013   End:  Thu May  9 13:39:16 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_III1182 hypothetical protein (364 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
smart00767	132	smart00767, DCD, DCD is a plant specific domain in	6e-74
pfam10539	130	pfam10539, Dev_Cell_Death, Development and cell de	1e-67

>gnl|CDD|214811 smart00767, DCD, DCD is a plant specific domain in proteins involved in development and programmed cell death

 Score =  223 bits (571), Expect = 6e-74
 Identities = 85/126 (67%), Positives = 94/126 (74%), Gaps = 5/126 (3%)

Query: 202 ETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAA 261
           ET+GGYIF+CNNDT  E  +RQLFGLP  YRD VR I PGLPLFLYNY T +LHGIFEA 
Sbjct: 1   ETLGGYIFMCNNDTKEECFRRQLFGLPRGYRDFVRNIKPGLPLFLYNYDTRKLHGIFEAT 60

Query: 262 SFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFR-PILHHYDGP-KFRLE 319
           SFGG NIDP A+E KK   ESRFPAQVR   RK C+PL E  FR  IL +YDGP KFR E
Sbjct: 61  SFGGLNIDPNAFEGKK---ESRFPAQVRFRIRKDCKPLPESEFRSAILENYDGPSKFRFE 117

Query: 320 LNVPEV 325
           L+  +V
Sbjct: 118 LSHAQV 123

The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone. Length = 132

>gnl|CDD|204508 pfam10539, Dev_Cell_Death, Development and cell death domain

 Score =  207 bits (529), Expect = 1e-67
 Identities = 73/124 (58%), Positives = 86/124 (69%), Gaps = 3/124 (2%)

Query: 204 IGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASF 263
           +GG IF CNN T  E  K+QLFGLP RY D V+ I PGLPLFL+NY   +LHGIFEAAS 
Sbjct: 1   LGGVIFGCNNKTRRECFKKQLFGLPARYIDYVKNIKPGLPLFLFNYDDRKLHGIFEAASN 60

Query: 264 GGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPIL--HHYDGPKFRLELN 321
           GG NIDP AW  K   GE+R+PAQVR   RK C+PL E  FRP +  ++YD  KFR EL+
Sbjct: 61  GGMNIDPNAWGSKG-KGETRYPAQVRFRIRKDCKPLPESKFRPAIIENYYDKNKFRFELS 119

Query: 322 VPEV 325
             +V
Sbjct: 120 HKQV 123

The DCD domain is found in plant proteins involved in development and cell death. The DCD domain is an approximately 130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N-terminus and a PAQV and a PLxE motif towards the C-terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognisable motifs, like the KELCH repeats or the ParB domain. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF10539	130	Dev_Cell_Death: Development and cell death domain;	100.0
smart00767	132	DCD DCD is a plant specific domain in proteins inv	100.0
PRK00809	144	hypothetical protein; Provisional	98.54
COG1673	151	Uncharacterized protein conserved in archaea [Func	97.69
PRK02268	141	hypothetical protein; Provisional	97.01
PF01878	143	EVE: EVE domain; InterPro: IPR002740 The EVE domai	95.89

>PF10539 Dev_Cell_Death: Development and cell death domain; InterPro: IPR013989 The DCD (Development and Cell Death) domain is found in plant proteins involved in development and cell death

Probab=100.00  E-value=2e-57  Score=386.21  Aligned_cols=122  Identities=53%  Similarity=0.935  Sum_probs=116.6

Q ss_pred             cceEEEEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEEeccCceEEeeeeeccCCCcccCcccccCCCCCCCCc
Q 020434          204 IGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESR  283 (326)
Q Consensus       204 lgGfIFmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~RkLhGIFEAaS~Gg~NIdP~AF~s~~~~g~t~  283 (326)
                      |||||||||++|++|||+++|||||++|+++|++||||||||||||++|+|||||||+|+|+|||+|.||.+++ .+.++
T Consensus         1 lgG~IF~Cn~~T~~ECf~~~lFGLP~~~~~~V~~I~pG~~LFLfn~~~r~L~GifeA~S~G~~ni~p~Af~~~~-~~~~~   79 (130)
T PF10539_consen    1 LGGFIFMCNNKTKPECFRRQLFGLPAGHKDFVKKIKPGMPLFLFNYSDRKLYGIFEATSDGGMNIEPYAFSGSG-SGESP   79 (130)
T ss_pred             CceEEEEECCCCHHHHHhcccccCChhhhhHHheeCCCCEEEEEEcCCCEEEEEEEecCCCccCcChhhhCCCC-CCCcc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999987 46799


Q ss_pred             cCceEEEEeeeeccCCCcccchhhh-h-cCCCCCccccCCccccC
Q 020434          284 FPAQVRVVTRKICEPLEEDSFRPIL-H-HYDGPKFRLELNVPEVI  326 (326)
Q Consensus       284 FPAQVRfki~k~C~PL~Es~FKpiI-~-~Y~~~KF~fELs~~qvl  326 (326)
                      |||||||+|+|+|+||+|++||++| + ||+++||+||||++||+
T Consensus        80 fPAQVrf~i~~~C~PL~E~~fk~aI~~Ny~~~~kF~~eLs~~Qv~  124 (130)
T PF10539_consen   80 FPAQVRFRIRWDCPPLPESQFKPAIKDNYYDKNKFRFELSHQQVR  124 (130)
T ss_pred             cceEEEEEEeeeeecCCHHHHHHHHHHhCCCCCcccCcCCHHHHH
Confidence            9999999999999999999999999 4 56668999999999984

The DCD domain is an ~130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N terminus and a PAQV and a PLxE motif towards the C terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognizable motifs, like the KELCH repeats or the ParB domain []. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone. The predicted secondary structure of the DCD domain is mostly composed of beta strands and confined by an alpha-helix at the N- and at the C terminus []. Proteins known to contain a DCD domain are listed below: Carrot B2 protein. Pea Gda-1 protein. Soybean N-rich protein (NRP).

>smart00767 DCD DCD is a plant specific domain in proteins involved in development and programmed cell death

Probab=100.00  E-value=5.6e-57  Score=384.47  Aligned_cols=122  Identities=67%  Similarity=1.165  Sum_probs=116.0

Q ss_pred             CCcceEEEEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEEeccCceEEeeeeeccCCCcccCcccccCCCCCCC
Q 020434          202 ETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGE  281 (326)
Q Consensus       202 ~~lgGfIFmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~RkLhGIFEAaS~Gg~NIdP~AF~s~~~~g~  281 (326)
                      +++||||||||++|++|||+++|||||+.++++|++|||||+||||||++|+|||||||+|+|+|||+|.||.+++   +
T Consensus         1 ~~lgG~IF~Cn~~T~~Ecf~~~lFGLP~~~~~~V~~IkpG~~LFLfn~~~r~L~GifeA~S~G~~ni~p~Af~~~~---~   77 (132)
T smart00767        1 ETLGGYIFMCNNDTKEECFRRQLFGLPRGYRDFVRNIKPGLPLFLYNYDTRKLHGIFEATSFGGLNIDPNAFEGKK---E   77 (132)
T ss_pred             CCcceEEEEeCCCCHHHHHhcccccCChhhhhhhheeCCCCEEEEEecCCceeeeEEEeccCCcCCcChhHhcCCC---C
Confidence            4699999999999999999999999999999999999999999999999999999999999999999999999875   5


Q ss_pred             CccCceEEEEeeeeccCCCcccchhhh-hcCCC-CCccccCCccccC
Q 020434          282 SRFPAQVRVVTRKICEPLEEDSFRPIL-HHYDG-PKFRLELNVPEVI  326 (326)
Q Consensus       282 t~FPAQVRfki~k~C~PL~Es~FKpiI-~~Y~~-~KF~fELs~~qvl  326 (326)
                      ++|||||||+|+|+|+||+|++||++| +||++ +||+||||++||+
T Consensus        78 s~fPaQVrf~i~~~C~PL~E~~f~~aI~~nY~~~~kF~~eLs~~Qv~  124 (132)
T smart00767       78 SRFPAQVRFRIRKDCKPLPESEFRSAILENYDGPSKFRFELSHAQVL  124 (132)
T ss_pred             CccCcEEEEEEeeeecCCCHHHHHHHHHHhCcCCccccccCCHHHHH
Confidence            899999999999999999999999988 67776 4999999999984

The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone.

>PRK00809 hypothetical protein; Provisional

Probab=98.54  E-value=3.1e-07  Score=79.39  Aligned_cols=97  Identities=24%  Similarity=0.485  Sum_probs=76.9

Q ss_pred             EEEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEEecc-------CceEEeeeeeccCCCcccCccc-ccCCCCC
Q 020434          208 IFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYS-------THQLHGIFEAASFGGTNIDPTA-WEDKKCP  279 (326)
Q Consensus       208 IFmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s-------~RkLhGIFEAaS~Gg~NIdP~A-F~s~~~~  279 (326)
                      |.+-+.+....|.++.+||+|.+++.++++++|||.||.|.-.       ...+.||.|.++++ + .||.+ |.+.+.+
T Consensus         5 i~~~~~~~~~~~~~~gv~g~~~~~rn~lr~Mk~GD~v~fYhs~~~~~~~~~~~ivgi~eV~~~~-y-~D~t~~~p~~~~~   82 (144)
T PRK00809          5 LCITNEDNWEVIKDKNVWGVPERYKNTIEKVKPGDKLIIYVSQEYGAERLPGKIVGIYEVVSEW-Y-EDSTPIFPAEPVR   82 (144)
T ss_pred             EEecCHHHHHHHHhCCEeecchhhhhHHhhCCCCCEEEEEECCccCCCCCCceEEEEEEEecCc-c-cCCccCCCccccC
Confidence            5566778889999999999999999999999999999999998       57899999999987 3 35554 4333334


Q ss_pred             CCCccCceEEEEeeeeccCCCcccchhhh
Q 020434          280 GESRFPAQVRVVTRKICEPLEEDSFRPIL  308 (326)
Q Consensus       280 g~t~FPAQVRfki~k~C~PL~Es~FKpiI  308 (326)
                      .+.+||.+|+++.....+.  +..++++|
T Consensus        83 ~~~~~p~rvdV~~~~~~~~--~v~l~~L~  109 (144)
T PRK00809         83 PKEIYPYRVKLKPVKIFEE--PIDFKPLI  109 (144)
T ss_pred             CCCCceEEEEEEEeeecCC--cccHHHHH
Confidence            5789999999998865542  24555554

>COG1673 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.69  E-value=6.1e-05  Score=66.91  Aligned_cols=86  Identities=20%  Similarity=0.394  Sum_probs=73.6

Q ss_pred             hhhhccCCccchhhhhccCCCCcEEEEeccCc-------eEEeeeeeccCCCcccCcccccCCCCCCCCccCceEEEEee
Q 020434          221 KRQLFGLPPRYRDSVRAITPGLPLFLYNYSTH-------QLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTR  293 (326)
Q Consensus       221 ~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~R-------kLhGIFEAaS~Gg~NIdP~AF~s~~~~g~t~FPAQVRfki~  293 (326)
                      .+.++|.|..+.....+|++|+.|..|..++.       ++.|||||+|.. +-.+...|..++.++...||-+||++++
T Consensus        23 ~k~i~g~~~k~~~v~~~ik~g~~~v~y~~~~~~~~~~~~~iv~v~ev~se~-y~ds~r~f~~~~~~~~~~~~~r~k~~p~  101 (151)
T COG1673          23 EKGIYGVREKHENVEEKIKEGDRLVIYVRQRGEKERHEPKIVGVFEVGSEP-YSDSSRIFKIDPFRGDETFPYRVKIRPV  101 (151)
T ss_pred             ccceeecCCCCccHHHhhCccceeEEEeeecchhhccCccEEEEEEeeccc-cccccccccCCCCCCccccccccCcceE
Confidence            35789999999999999999999999986654       899999999998 6666667888776667899999999999


Q ss_pred             eeccCCCcccchhhhh
Q 020434          294 KICEPLEEDSFRPILH  309 (326)
Q Consensus       294 k~C~PL~Es~FKpiI~  309 (326)
                      +..++  ...|+++|.
T Consensus       102 ~i~e~--~i~~k~~~~  115 (151)
T COG1673         102 KVGEV--HIKFKPLID  115 (151)
T ss_pred             EEEec--ccCcchhhh
Confidence            99876  578888663

>PRK02268 hypothetical protein; Provisional

Probab=97.01  E-value=0.0015  Score=57.37  Aligned_cols=76  Identities=17%  Similarity=0.178  Sum_probs=58.8

Q ss_pred             hhhhccCCccchhhhhccCCCCcEEEEeccC--------ceEEeeeeeccCCCcccCcccccCCCCCCCCccCceEEEEe
Q 020434          221 KRQLFGLPPRYRDSVRAITPGLPLFLYNYST--------HQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVT  292 (326)
Q Consensus       221 ~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~--------RkLhGIFEAaS~Gg~NIdP~AF~s~~~~g~t~FPAQVRfki  292 (326)
                      +..+++++.+++..+++|||||.|..|--.+        ..+.||++.+++--+.       .  .++.+-||.+++++.
T Consensus        19 ~~gf~qv~hgK~apl~RmkpGD~ivyYsp~~~~~~~~~~qaftAig~V~~~~~Yq-------~--~m~~~f~P~Rr~v~~   89 (141)
T PRK02268         19 EGGFMQVCHGKAAPLRRMKPGDWIIYYSPKTTFGGKDKLQAFTAIGKVKDDEPYQ-------V--EMAPGFIPWRRDVDY   89 (141)
T ss_pred             hCCEEEeCCCccchhhcCCCCCEEEEEeceEecCCCcccceEEEEEEEcCCceEe-------c--ccCCCceeEEEEeeE
Confidence            3467899999999999999999999998433        3788888888774333       1  134567999999998


Q ss_pred             eeeccCCCcccchhhhh
Q 020434          293 RKICEPLEEDSFRPILH  309 (326)
Q Consensus       293 ~k~C~PL~Es~FKpiI~  309 (326)
                      . .|   .|..++|+|.
T Consensus        90 ~-~~---~e~pi~pLi~  102 (141)
T PRK02268         90 Y-PC---AETPIRPLLD  102 (141)
T ss_pred             e-ec---CccchHHhhc
Confidence            7 44   5688999985

>PF01878 EVE: EVE domain; InterPro: IPR002740 The EVE domain is part of the wider PUA domain superfamily

Probab=95.89  E-value=0.011  Score=49.48  Aligned_cols=71  Identities=20%  Similarity=0.211  Sum_probs=44.2

Q ss_pred             hhhccCCCCcEEEEecc--CceEEeeeeeccCCCcccCcccccCCCCCCC--CccCceEEEEeeeecc-CCCcccch
Q 020434          234 SVRAITPGLPLFLYNYS--THQLHGIFEAASFGGTNIDPTAWEDKKCPGE--SRFPAQVRVVTRKICE-PLEEDSFR  305 (326)
Q Consensus       234 ~VkkIKPGmpLFLYn~s--~RkLhGIFEAaS~Gg~NIdP~AF~s~~~~g~--t~FPAQVRfki~k~C~-PL~Es~FK  305 (326)
                      .+++|||||.+|+|.-.  .+.++||.|.+++.-.+-.+. +...+....  .++|..|+++...... ||+-.+.|
T Consensus        36 ~l~~mk~GD~vifY~s~~~~~~ivai~~V~~~~~~d~~~~-~~~~~~~~~~~~~~~~~v~v~~~~~~~~pi~l~~Lk  111 (143)
T PF01878_consen   36 NLKRMKPGDKVIFYHSGCKERGIVAIGEVVSEPYPDPTAF-DPDSPYYDPKSNPKPYRVDVEYVKIFEKPIPLKELK  111 (143)
T ss_dssp             HHHC--TT-EEEEEETSSSS-EEEEEEEEEEEEEE-GGGT-STTSTTBTTTSCSSSEEEEEEEEEEEEEEEEHHHHH
T ss_pred             hhhcCCCCCEEEEEEcCCCCCEEEEEEEEeccccCCCccc-cccccCcCCccCCCeeEEEEEEEEecCCCcCHHHHh
Confidence            78899999999999998  689999999999864333331 111111111  3588888888776555 65544443

The function of this domain is not known but, given the structural similarities to PUA, is likely to involve RNA binding []. ; PDB: 2G2X_B 2AR1_A 3EOP_A 2EVE_A 2HD9_A 2ZBN_A 1WMM_A 2P5D_A 2GBS_A 1ZCE_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	326
2p5d_A	147	UPF0310 protein mjecl36; NPPSFA, national project	98.16
2hd9_A	145	UPF0310 protein PH1033; pyrococcus horikoshii OT3,	98.11
2ar1_A	172	Hypothetical protein; structural genomics, PSI, pr	91.45
2eve_A	157	Hypothetical protein pspto5229; alpha-beta protein	91.34
1zce_A	155	Hypothetical protein ATU2648; alpha-beta protein.,	86.97

>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}

Probab=98.16  E-value=5.8e-06  Score=69.94  Aligned_cols=98  Identities=19%  Similarity=0.434  Sum_probs=72.4

Q ss_pred             EEEEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEE-----ecc--CceEEeeeeeccCCCcccCccccc-CCCC
Q 020434          207 YIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLY-----NYS--THQLHGIFEAASFGGTNIDPTAWE-DKKC  278 (326)
Q Consensus       207 fIFmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLY-----n~s--~RkLhGIFEAaS~Gg~NIdP~AF~-s~~~  278 (326)
                      -|+..+.++-+.|.+..++|++.+++.+++++|+||.+|.|     .-.  .+.+.||.|.++++ +- ++++|. ..+.
T Consensus         7 WL~~se~~~~~~~~~~g~wGVn~~arn~lr~Mk~GD~~~fY~~~~~hs~~~~~~ivGi~eV~~e~-y~-D~t~~dp~~~y   84 (147)
T 2p5d_A            7 WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEV-YK-DSSKIFKPTPR   84 (147)
T ss_dssp             EEEEECHHHHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCBCSTTCBCCEEEEEEEECSCC-EE-CCCCCSCCBTT
T ss_pred             eeeecCHHHHHHHHHcCeeecCHHHHHHHHhCCCCCEEEEEEecccCCCCCCCEEEEEEEEeccc-cc-CCcccCcCccC
Confidence            35555566677788889999999999999999999999999     444  35999999999965 44 555553 3322


Q ss_pred             CCCCccCceEEEEeeeeccCCCcccchhhh
Q 020434          279 PGESRFPAQVRVVTRKICEPLEEDSFRPIL  308 (326)
Q Consensus       279 ~g~t~FPAQVRfki~k~C~PL~Es~FKpiI  308 (326)
                      .++.++|..|.|+....+..  +..+++++
T Consensus        85 ~~~~~~w~~VdV~~v~~~~~--~v~L~~Lk  112 (147)
T 2p5d_A           85 NPNEKFPYRVKLKEIKVFEP--PINFKELI  112 (147)
T ss_dssp             BTTCCCCEEEEEEEEEEEEE--EEEHHHHG
T ss_pred             cCCCCCceEEEEEEEeecCC--ccCHHHHH
Confidence            34678999999997766432  34455555

>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A

Probab=98.11  E-value=8.3e-06  Score=68.84  Aligned_cols=95  Identities=19%  Similarity=0.408  Sum_probs=69.1

Q ss_pred             EEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEEeccC---------ceEEeeeeeccCCCcccCcccccCCCCC
Q 020434          209 FVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYST---------HQLHGIFEAASFGGTNIDPTAWEDKKCP  279 (326)
Q Consensus       209 FmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~---------RkLhGIFEAaS~Gg~NIdP~AF~s~~~~  279 (326)
                      +..+-+.-+.+.+..++|++..++.+++++||||.+|.|.-..         +.+.||+|.++++ +-.....|.+.+..
T Consensus         6 ~kss~d~~~~~~~~g~~GVn~~arn~lr~mk~GD~~~fYhs~~~~~~~~~~~~~ivGi~eV~~e~-y~D~t~~~~~~~~~   84 (145)
T 2hd9_A            6 CITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEP-YVDFSRIFKPHRGG   84 (145)
T ss_dssp             EEECHHHHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCC-EECCCCCSCCTTSS
T ss_pred             EeCCHHHHHHHHHcCccccCHHHHHHHHhCCCCCEEEEEEccccccCCCCCCceEEEEEEEcCCc-EeCCCccCCCcccc
Confidence            3333444556666788999888999999999999999999876         6999999999865 55444434333222


Q ss_pred             CCCccCceEEEEeeeeccCCCcccchhhhh
Q 020434          280 GESRFPAQVRVVTRKICEPLEEDSFRPILH  309 (326)
Q Consensus       280 g~t~FPAQVRfki~k~C~PL~Es~FKpiI~  309 (326)
                       ...+|.+|.++++.. .   +..++++++
T Consensus        85 -~~~~p~rv~v~~v~~-~---~i~~~~l~~  109 (145)
T 2hd9_A           85 -KETYPYRVKIKPIKI-G---EINFKPLIN  109 (145)
T ss_dssp             -CCCCCEEEEEEEEEE-E---EEESGGGGG
T ss_pred             -cCCeeEEEeCEEEee-c---cCcHHHHHh
Confidence             458999999988764 3   456666664

>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8

Probab=91.45  E-value=0.22  Score=44.04  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=51.8

Q ss_pred             cCCccc-hhhhhccCCCCcEEEEecc--CceEEeeeeeccCCCcccCcccccCCC-----CCC-CCccCceEEEEeeeec
Q 020434          226 GLPPRY-RDSVRAITPGLPLFLYNYS--THQLHGIFEAASFGGTNIDPTAWEDKK-----CPG-ESRFPAQVRVVTRKIC  296 (326)
Q Consensus       226 GLP~~h-~d~VkkIKPGmpLFLYn~s--~RkLhGIFEAaS~Gg~NIdP~AF~s~~-----~~g-~t~FPAQVRfki~k~C  296 (326)
                      |+--.. +.+++.+++|+.+|+|.-.  ...+.||.|.++.+  -.+|.+|....     +.. ..+-=..|.|+.+..+
T Consensus        46 GVRNyqARN~mr~Mk~GD~vfFYHS~c~~pgIvGi~eVv~e~--ypD~t~fdp~s~YyDpks~~~~prw~~VdV~~v~~~  123 (172)
T 2ar1_A           46 GVRNYAARNNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLA--YDDFTALDKTSEYFDPKATKEKNPWKMVDVKFVARW  123 (172)
T ss_dssp             CCCCHHHHHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEE--EECGGGGCTTSTTCCTTCCSSCCCCEEEEEEEEEEE
T ss_pred             CcCcHHHHHHHHhcCCCCEEEEEecCCCCCEEEEEEEEeeec--cCCcccccccCcccCcccCCCCCCeEEEEEEEeeec
Confidence            665444 5789999999999999988  67999999999975  35777775321     100 1111135666655554


Q ss_pred             -cCCCcccch
Q 020434          297 -EPLEEDSFR  305 (326)
Q Consensus       297 -~PL~Es~FK  305 (326)
                       .||+-++.|
T Consensus       124 ~~pvtL~eLK  133 (172)
T 2ar1_A          124 DTVLTLHELK  133 (172)
T ss_dssp             EEEEEHHHHT
T ss_pred             CCcccHHHHh
Confidence             566655555

>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A

Probab=91.34  E-value=0.24  Score=43.36  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=51.7

Q ss_pred             cCCccc-hhhhhccCCCCcEEEEecc--CceEEeeeeeccCCCcccCcccccCCC-----CCC-CCccCceEEEEeeeec
Q 020434          226 GLPPRY-RDSVRAITPGLPLFLYNYS--THQLHGIFEAASFGGTNIDPTAWEDKK-----CPG-ESRFPAQVRVVTRKIC  296 (326)
Q Consensus       226 GLP~~h-~d~VkkIKPGmpLFLYn~s--~RkLhGIFEAaS~Gg~NIdP~AF~s~~-----~~g-~t~FPAQVRfki~k~C  296 (326)
                      |+--.. +.+++.+++|+.+|+|.-.  .+.+.||.|.++++  -.||.+|....     +.. +.+-=..|.|+.+..+
T Consensus        28 GVRNyqArN~mr~Mk~GD~~ffYHS~c~~pgIvGi~eVv~e~--ypD~t~fdp~s~YyDpks~~~~prw~~VdV~~v~~~  105 (157)
T 2eve_A           28 GVRNYQARNFLRTMAEGDEFFFYHSSCPEPGIAGIGKIVKTA--YPDPTALDPDSHYHDAKATTEKNPWSALDIGFVDIF  105 (157)
T ss_dssp             CCCCHHHHHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEE--EECGGGGCTTSTTCCTTCCSSCCCCEEEEEEEEEEE
T ss_pred             CcccHHHHHHHHhcCCCCEEEEEecCCCCCEEEEEEEEeEcc--CCCcccccccCcCcCcccCCCCCCEEEEEEEEeeec
Confidence            655433 5789999999999999988  67999999999975  35777775321     100 1111135666655444


Q ss_pred             -cCCCcccchh
Q 020434          297 -EPLEEDSFRP  306 (326)
Q Consensus       297 -~PL~Es~FKp  306 (326)
                       .||+-++.|.
T Consensus       106 ~~pv~L~elK~  116 (157)
T 2eve_A          106 KNVLGLGYLKQ  116 (157)
T ss_dssp             EEEEEHHHHHT
T ss_pred             CCccCHHHHhc
Confidence             4666555553

>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8

Probab=86.97  E-value=0.63  Score=40.55  Aligned_cols=71  Identities=23%  Similarity=0.319  Sum_probs=48.4

Q ss_pred             cCCccc-hhhhhccCCCCcEEEEecc-CceEEeeeeeccCCCcccCcccccCCCCCCCCccCceEEEEeeeec-cCCCcc
Q 020434          226 GLPPRY-RDSVRAITPGLPLFLYNYS-THQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKIC-EPLEED  302 (326)
Q Consensus       226 GLP~~h-~d~VkkIKPGmpLFLYn~s-~RkLhGIFEAaS~Gg~NIdP~AF~s~~~~g~t~FPAQVRfki~k~C-~PL~Es  302 (326)
                      |+--.. +.+++.+++|+.+|+|.-. .+.+.||.|.++++  -.||.+|..+      ++ ..|.|+....+ .||+-+
T Consensus        31 GVRNyqArN~mr~Mk~GD~~fFYHS~~~~gIvGi~eVv~e~--ypD~t~~d~P------rw-~~VdV~~v~~~~~pvtL~  101 (155)
T 1zce_A           31 GVRNYQARNNMRAMKIGDKGFFYHSNEGLDVVGIVEVCALS--HPDSTAEGDL------KW-DCVDIRAVCDMPQPVSLK  101 (155)
T ss_dssp             CCCCHHHHHHHHTCCTTCEEEEEETTTTCEEEEEEEEEEEE--EECTTSTTCS------SC-EEEEEEEEEEEEEEEEHH
T ss_pred             CcccHHHHHHHHhccCCCEEEEEEeCCCCceEEEEEEeeec--cCCCCcCCCC------Ce-EEEEEEEccccCCcccHH
Confidence            655444 6789999999999999877 33799999999986  2367777521      11 34555555443 566655


Q ss_pred             cch
Q 020434          303 SFR  305 (326)
Q Consensus       303 ~FK  305 (326)
                      +.|
T Consensus       102 eLK  104 (155)
T 1zce_A          102 DVK  104 (155)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	326
d2hd9a1	145	Hypothetical protein PH1033 {Pyrococcus horikoshii	98.38
d2evea1	148	Hypothetical protein PSPTO5229 {Pseudomonas syring	86.81

>d2hd9a1 b.122.1.8 (A:1-145) Hypothetical protein PH1033 {Pyrococcus horikoshii [TaxId: 53953]}

class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: Atu2648/PH1033-like
domain: Hypothetical protein PH1033
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.38  E-value=6.1e-07  Score=73.78  Aligned_cols=97  Identities=20%  Similarity=0.428  Sum_probs=80.0

Q ss_pred             EEEEecCcChHHHHhhhhccCCccchhhhhccCCCCcEEEEeccCc---------eEEeeeeeccCCCcccCcccccCCC
Q 020434          207 YIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTH---------QLHGIFEAASFGGTNIDPTAWEDKK  277 (326)
Q Consensus       207 fIFmCN~~Tk~ECf~r~LFGLP~~h~d~VkkIKPGmpLFLYn~s~R---------kLhGIFEAaS~Gg~NIdP~AF~s~~  277 (326)
                      .|.+++.+..+.+.++.++|++.+++..+++|+|||.|+.|.-..+         ..+||+|++|+. ...+...|.+. 
T Consensus         4 Wi~v~s~e~~~~~~~~g~~~~~~~k~~~~~rikpGD~li~Y~~~~~~~~~~~~~q~f~ai~~V~~~~-~~d~t~i~~~~-   81 (145)
T d2hd9a1           4 WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEP-YVDFSRIFKPH-   81 (145)
T ss_dssp             EEEEECHHHHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCC-EECCCCCSCCT-
T ss_pred             EEEeCCHHHHHHHHhCCEEeccCCchhhHhhCCCCCEEEEEeCccccCCCcccccEEEEEEEEeccc-eeccccccccc-
Confidence            4677888889999999999999999999999999999999987643         599999999876 55555567655 


Q ss_pred             CCCCCccCceEEEEeeeeccCCCcccchhhhh
Q 020434          278 CPGESRFPAQVRVVTRKICEPLEEDSFRPILH  309 (326)
Q Consensus       278 ~~g~t~FPAQVRfki~k~C~PL~Es~FKpiI~  309 (326)
                      .++...||.+|+++... |   .|..++|+++
T Consensus        82 ~~~~~~~P~R~~v~~~~-~---~ev~i~~l~~  109 (145)
T d2hd9a1          82 RGGKETYPYRVKIKPIK-I---GEINFKPLIN  109 (145)
T ss_dssp             TSSCCCCCEEEEEEEEE-E---EEEESGGGGG
T ss_pred             ccCCceEEEEEEeEEee-c---ccccHHHHHh
Confidence            34678899999999865 3   3588999886

>d2evea1 b.122.1.8 (A:2-149) Hypothetical protein PSPTO5229 {Pseudomonas syringae [TaxId: 317]}

class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: Atu2648/PH1033-like
domain: Hypothetical protein PSPTO5229
species: Pseudomonas syringae [TaxId: 317]

Probab=86.81  E-value=0.38  Score=39.52  Aligned_cols=72  Identities=21%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             hhhhhccCCCCcEEEEecc--CceEEeeeeeccCCCcccCcccccCCC------CCCCCccCceEEEEeeeecc-CCCcc
Q 020434          232 RDSVRAITPGLPLFLYNYS--THQLHGIFEAASFGGTNIDPTAWEDKK------CPGESRFPAQVRVVTRKICE-PLEED  302 (326)
Q Consensus       232 ~d~VkkIKPGmpLFLYn~s--~RkLhGIFEAaS~Gg~NIdP~AF~s~~------~~g~t~FPAQVRfki~k~C~-PL~Es  302 (326)
                      +.+++..+.|+.+|+|.-.  ...+.||-|.++++  -.+|.||....      ...+.+--.-|.++....+. ||+-+
T Consensus        34 rn~lr~M~~GD~~~fYHS~~~~~~IvGia~V~~~a--ypDpt~~d~~s~y~D~ks~~e~prw~~Vdv~~~~~~~~~vtL~  111 (148)
T d2evea1          34 RNFLRTMAEGDEFFFYHSSCPEPGIAGIGKIVKTA--YPDPTALDPDSHYHDAKATTEKNPWSALDIGFVDIFKNVLGLG  111 (148)
T ss_dssp             HHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEE--EECGGGGCTTSTTCCTTCCSSCCCCEEEEEEEEEEEEEEEEHH
T ss_pred             HHHHHhcccCCEEEEEecCCCCCceEEEEEEEEec--cccCccccCCCceeccccccCCCCeeEEEEEeccccCCcccHH
Confidence            4678999999999999875  57899999999886  46778776432      11223334567777665554 66544


Q ss_pred             cch
Q 020434          303 SFR  305 (326)
Q Consensus       303 ~FK  305 (326)
                      +.|
T Consensus       112 elK  114 (148)
T d2evea1         112 YLK  114 (148)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            444