Citrus Sinensis ID: 020484

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
Protein Sequence
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRNVLW
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHccccccccccccHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccccccccccccccEEEccccccccccccHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mgevsreelplpslferGRKIHQIatesgcdpdavrkgCEVLEKCEDMVgklglfssnetkddistaNLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAqakptaftDQRARKIARFKRQRAAESKLQEIKERKerrgrstraaapsapveageedvldddgeEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQlkggeeefSEVVLDERSKKAESWHRDAAIRaqytkpaqpitcATFAQDVLEGRAKVSqahehkhqpmifgpaslvgggltsERERMAAQVFQPMHRNVLW
Flexible Loop (DISEMBL)
mgevsreelplpslferGRKIHQiatesgcdpdaVRKGCEVLEKCEDMVGKlglfssnetkddistANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAqakptaftdqRARKIARFKrqraaesklqeikerkerrgrstraaapsapveageedvlddDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKErqlkggeeefsevvlderskkaesWHRDAAIraqytkpaqpiTCATFAQDVLEGRAKVSQAHehkhqpmifgpaSLVGGGLTSERERMAaqvfqpmhrnvlw
Low Complexity Region (SEG)
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMelvpeeeleavaQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPveageedvldddgeeereAWLTTISLAVCKAldllemlkkeedmlSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRNVLW
Disordered region (IsUnstruct)
**********************QIAT**GCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEE**************************************************************************AWLTTISLAVCKALDLLEMLK***************************************AAIRAQYTKPAQPITCATFAQDVLEG************************************************
Disordered Region (DISOPRED)
*************LFERGR***************VRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPE*********************************************************************GEEEREAWLTTISLAVCKALDLLEMLKKE*************************************************PITCATFA****************************************AAQVFQPMH*****
Disordered Region (DISEMBL)
********LPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIA*************************************************EREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLK**********************RDAAIRAQYTKPAQPITCATFAQDVLEGR**********HQPMIFGPASLVGGGLTSERERMAAQVFQPMHRNVLW
Disordered Region (DISPRO)
*******ELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVA***PTAFTDQRARKIARFKRQRAAESKLQEIKERKER***********************DDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQL**************RS*KAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRNVLW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRNVLW
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	325	2.2.26 [Sep-21-2011]
Q8LDQ4	405	PP2A regulatory subunit T	yes	no	0.987	0.792	0.725	1e-136
Q9Y7T1	323	Uncharacterized protein C	yes	no	0.698	0.702	0.279	2e-16
P78318	339	Immunoglobulin-binding pr	yes	no	0.584	0.560	0.284	3e-12
Q61249	340	Immunoglobulin-binding pr	yes	no	0.433	0.414	0.298	5e-10
Q9QZ29	343	Immunoglobulin-binding pr	no	no	0.510	0.483	0.276	2e-09
O08836	340	Immunoglobulin-binding pr	no	no	0.6	0.573	0.287	2e-09
Q04372	366	Type 2A phosphatase-assoc	yes	no	0.190	0.169	0.364	4e-05

>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1 SV=2

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/321 (72%), Positives = 276/321 (85%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG ++ EE+PL  LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1   MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE MELVP+EELE
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
           A ++    A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
           + DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE  FS   LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240

Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
           R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300

Query: 301 GGGLTSERERMAAQVFQPMHR 321
           GG L++ERERM AQVFQP HR
Sbjct: 301 GGPLSTERERMIAQVFQPSHR 321

Seems to act as a regulator of PP2A catalytic activity.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y7T1|YCJ5_SCHPO Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC63.05 PE=3 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 38/265 (14%)

Query: 13  SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
           SL E   +  ++   S  D     +  E  EKC  +V +L +FSSNE  D+I T+ L+Y+
Sbjct: 5   SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64

Query: 73  LVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTD 132
           ++ Y L + +E+  + DRL+ ++ ++   + F+S C+   L P      +   KP    D
Sbjct: 65  MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKP------MQDEKPKTEAD 118

Query: 133 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREA 192
            R  KIAR++ ++  E +L+                A S   E  E        E+ER+ 
Sbjct: 119 TRTLKIARYRMRQNLEKELK----------------ALSKDSETNE--------EQERKF 154

Query: 193 WLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGE--EEFSEVVLDERSKKAE--SW 248
           WLT + +AV   LD L  ++ E D+L   +   +K  +  E+  E +  E  K+ E  SW
Sbjct: 155 WLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLRREERKQKEGSSW 214

Query: 249 HRDAAIRAQY----TKPAQPITCAT 269
             D   R +      +P QP T  +
Sbjct: 215 RLDLNTRDKILDKNNRPLQPFTIVS 239

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P78318|IGBP1_HUMAN Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 42/232 (18%)

Query: 8   ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           +LP LP LFE GR++    ++ATE   S    + V KG ++LEK  +M+ +L LFS NE 
Sbjct: 8   QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67

Query: 61  KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC----------- 108
            ++I++ +LKY+LVP F G L ++++    RL  L+ ++     +++ C           
Sbjct: 68  LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELP 127

Query: 109 EIMELVPEEELEAVAQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTR 166
           + M    E      + A P+  A   QR  KI R+K+++  E +L  +K           
Sbjct: 128 KTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMK----------- 176

Query: 167 AAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 218
                + VE+G+      D E  RE +L  +   +  +L+ +E + +E  +L
Sbjct: 177 -----SAVESGQA-----DDERVREYYLLHLQRWIDISLEEIESIDQEIKIL 218

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Homo sapiens (taxid: 9606)

>sp|Q61249|IGBP1_MOUSE Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=1 SV=1

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)

Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 17  FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 76

Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELV-----------PE 116
           LKY++VP   G L ++++    RL  L+ ++     F++ C    +             E
Sbjct: 77  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 136

Query: 117 EELEAVAQAKPT--AFTDQRARKIARFKRQRAAESKLQEIK 155
               + + A P   A   QR  KI R+K+++  E +L  +K
Sbjct: 137 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 177

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Mus musculus (taxid: 10090)

>sp|Q9QZ29|IGB1B_MOUSE Immunoglobulin-binding protein 1b OS=Mus musculus GN=Igbp1b PE=2 SV=1

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 22/188 (11%)

Query: 28  SGCDP--DAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK- 84
           +G  P  + VR+  ++LEK  DM+ +L LFS NE  ++I++A+LKY+++P   G L  K 
Sbjct: 34  TGSKPIQEKVREALKLLEKASDMLSQLDLFSRNEDWEEIASADLKYLMLPALKGALTLKL 93

Query: 85  IAQDDRLQILKASQAKLKEFISFCEIMEL----VPEEELEAVAQAKPTAFTDQRARKIAR 140
           +    RL +L+ ++     F++      +    +P  +  ++ +  P A +D + + +  
Sbjct: 94  VGSSKRLGLLQDAREHFMNFLTQTHSYHVADFQLPWAQSSSM-EGNPAATSDAQEQNLVA 152

Query: 141 FKRQRAAESKLQEIKERK--ERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTIS 198
              QR  ++K+Q  K++K  E+R  S ++A     VE+G+      D E  RE +L  + 
Sbjct: 153 MASQR--QTKIQRYKQKKAVEQRLSSLKSA-----VESGQA-----DDERVREYYLLQLR 200

Query: 199 LAVCKALD 206
             +  +LD
Sbjct: 201 RWISISLD 208

Associated to surface IgM-receptor; may be involved in signal transduction (By similarity). May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Mus musculus (taxid: 10090)

>sp|O08836|IGBP1_RAT Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2 SV=2

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 17/212 (8%)

Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 17  FETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASID 76

Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKP 127
           LKY++VP   G L ++++    RL  L+ ++     F++ C     V E +L    Q K 
Sbjct: 77  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYH-VAEFQL---PQTKN 132

Query: 128 TAFTDQRARKIARFKRQRAAESKLQ-EIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 186
            +  +  AR    +    A  S+ Q +I+  K+++    R +A  + VE+G+      D 
Sbjct: 133 NSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVESGQA-----DD 187

Query: 187 EEEREAWLTTISLAVCKALDLLEMLKKEEDML 218
           E  RE +L  +   +  +L+ +E + +E  +L
Sbjct: 188 ERVREYYLLHLRRWIGISLEEIESIDQEIKIL 219

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Rattus norvegicus (taxid: 10116)

>sp|Q04372|TAP42_YEAST Type 2A phosphatase-associated protein 42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAP42 PE=1 SV=1

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 12/74 (16%)

Query: 48  MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDD---------RLQILKASQ 98
           +  +L LFS+NET DD+STA++K++ V Y+LG LI +   +D         +L  LK S 
Sbjct: 49  IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKS- 107

Query: 99  AKLKEFISFCEIME 112
             ++ FI+F  +++
Sbjct: 108 --VESFINFLTLLQ 119

Involved in negative regulation of the TOR signaling pathway in response to type of available nitrogen source. Inhibitor of PP2A phosphatase SIT4, which results in inhibition of nuclear export of MSN2, due to lack of dephosphorylation by SIT4. Also required for rapamycin induced activation of expression of many nitrogen discrimination pathway (NDP) genes. In complex with PPH21, required for organization of the actin cytoskeletom during the cell cycle via a Rho GTPase-dependent mechanism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
225455360	403	PREDICTED: PP2A regulatory subunit TAP46	0.987	0.796	0.785	1e-144
356509245	398	PREDICTED: PP2A regulatory subunit TAP46	0.969	0.791	0.768	1e-142
224120846	405	predicted protein [Populus trichocarpa]	0.987	0.792	0.770	1e-142
270267863	403	Tap46 [Nicotiana benthamiana]	0.984	0.794	0.753	1e-140
357463963	404	PP2A regulatory subunit TAP46 [Medicago	0.987	0.794	0.748	1e-139
449461893	398	PREDICTED: PP2A regulatory subunit TAP46	0.963	0.786	0.755	1e-138
356516069	397	PREDICTED: PP2A regulatory subunit TAP46	0.969	0.793	0.756	1e-136
297826027	404	hypothetical protein ARALYDRAFT_901608 [	0.984	0.792	0.735	1e-135
255584076	417	PP2A regulatory subunit TAP46, putative	0.966	0.752	0.777	1e-135
18423459	405	PP2A regulatory subunit TAP46 [Arabidops	0.987	0.792	0.725	1e-134

>gi|225455360|ref|XP_002277330.1| PREDICTED: PP2A regulatory subunit TAP46 [Vitis vinifera] gi|302143911|emb|CBI23016.3| unnamed protein product [Vitis vinifera]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/321 (78%), Positives = 280/321 (87%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE   EE+ L +LFE+ RKIH  A+ESG D DAVRKGCE LEKCE+MV KLGLFSSNET
Sbjct: 1   MGEYKMEEMSLLALFEQARKIHLAASESGADQDAVRKGCEALEKCEEMVSKLGLFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           KDDIST+NLKY+LVP++L EL EKIAQDDR+QILK SQAKLKEFISFCE MELVPEEELE
Sbjct: 61  KDDISTSNLKYLLVPFYLAELTEKIAQDDRIQILKVSQAKLKEFISFCEAMELVPEEELE 120

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
              Q  P +F D+RA+KIARFKRQRAAESKL EIKERKERRGRST+A+A S PV+ G+ED
Sbjct: 121 TSTQGGPNSFADRRAKKIARFKRQRAAESKLLEIKERKERRGRSTKASALSTPVDTGDED 180

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
           VLDDDGEEEREAWLTTISLA+CKA DLLEMLKKEE+MLSA+KE+QL+ G++E S  +LDE
Sbjct: 181 VLDDDGEEEREAWLTTISLALCKAFDLLEMLKKEEEMLSAIKEKQLQEGDKEVSRAILDE 240

Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
           R+K+ E WHRDAA RAQYTKPA PITCATFAQDVLEGRA VSQ HEHKHQPMIFGPASLV
Sbjct: 241 RAKRTEDWHRDAAARAQYTKPAPPITCATFAQDVLEGRATVSQVHEHKHQPMIFGPASLV 300

Query: 301 GGGLTSERERMAAQVFQPMHR 321
           GG LT+ERE MAAQVFQP HR
Sbjct: 301 GGRLTNEREIMAAQVFQPSHR 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509245|ref|XP_003523361.1| PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/315 (76%), Positives = 279/315 (88%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIST 66
           +++PLP+LFE+ RKIH  AT+SG D + V+KGCE L +CEDMV  LGLFS NETK+DIST
Sbjct: 2   DDMPLPALFEQARKIHAAATDSGADQEVVKKGCEALHRCEDMVNNLGLFSPNETKEDIST 61

Query: 67  ANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAK 126
            NLKYILVP++L EL EKIAQDDR+QILK+SQAKLKEFISFCE MELVP+EELE+     
Sbjct: 62  TNLKYILVPFYLAELTEKIAQDDRIQILKSSQAKLKEFISFCEAMELVPKEELESYIDGA 121

Query: 127 PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 186
           P    DQRARKIARFKRQRAAESKL EIKERKERRGRST+AAA S PVEAGEE+VLDDDG
Sbjct: 122 PKTVADQRARKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSTPVEAGEEEVLDDDG 181

Query: 187 EEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAE 246
           EEEREAW+TTISLA+CKALD+L+MLKKEE+MLSAVK+RQ K G++EFS+ VLDER+KKAE
Sbjct: 182 EEEREAWITTISLAICKALDMLDMLKKEEEMLSAVKDRQSKDGDKEFSKDVLDERAKKAE 241

Query: 247 SWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS 306
           +WHRD+A+RAQYT+P+ PITCATFAQDVLEGRAK SQ H+HKHQP+IFGPASLV G +T+
Sbjct: 242 AWHRDSAVRAQYTRPSPPITCATFAQDVLEGRAKASQEHDHKHQPLIFGPASLVNGNITT 301

Query: 307 ERERMAAQVFQPMHR 321
           ERERMAAQVFQP HR
Sbjct: 302 ERERMAAQVFQPSHR 316

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120846|ref|XP_002318432.1| predicted protein [Populus trichocarpa] gi|222859105|gb|EEE96652.1| predicted protein [Populus trichocarpa]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/322 (77%), Positives = 283/322 (87%), Gaps = 1/322 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGC-DPDAVRKGCEVLEKCEDMVGKLGLFSSNE 59
           MGE+  E++PLPSLF+   KIH  ATESG  D + V+KG E LEKCE+M+ KLGLFSSNE
Sbjct: 1   MGEMKTEDMPLPSLFDEASKIHVKATESGSSDQELVKKGIESLEKCEEMISKLGLFSSNE 60

Query: 60  TKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEEL 119
           TK+DIST NLKYILVP++L EL EKI QDDR+QILKASQAKLKEF+SFCE MELVPEEEL
Sbjct: 61  TKEDISTTNLKYILVPFYLAELAEKITQDDRIQILKASQAKLKEFLSFCEAMELVPEEEL 120

Query: 120 EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEE 179
           +A +Q  P  F D+RA KIAR+KRQRAAE+KL+EIKE KERRGRST+AAA S PVEAGEE
Sbjct: 121 QASSQGAPNTFVDRRALKIARYKRQRAAEAKLEEIKEWKERRGRSTKAAAVSTPVEAGEE 180

Query: 180 DVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLD 239
           DVLDDDGEEEREAW+TTISLA+CKA+DLLEMLKKEE+ML AVKERQLK G + FS+ +LD
Sbjct: 181 DVLDDDGEEEREAWITTISLAICKAIDLLEMLKKEEEMLLAVKERQLKEGGKAFSQTILD 240

Query: 240 ERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASL 299
           ER+KKAE+WHRDAA++A+YT+PAQPITCATFAQDVLEGRAKVSQAH+HKH P+ FGPASL
Sbjct: 241 ERAKKAENWHRDAAVKARYTQPAQPITCATFAQDVLEGRAKVSQAHDHKHVPITFGPASL 300

Query: 300 VGGGLTSERERMAAQVFQPMHR 321
           VGG LTSERERM AQVFQP HR
Sbjct: 301 VGGSLTSERERMRAQVFQPGHR 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|270267863|gb|ACZ65511.1| Tap46 [Nicotiana benthamiana]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/321 (75%), Positives = 281/321 (87%), Gaps = 1/321 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE+S +E+PLP+LFE+G KIH  A ES  D D VRKGCE+L +CE+M+GKLGLFS NET
Sbjct: 1   MGELSMQEMPLPALFEQGSKIHASA-ESSVDQDTVRKGCEILRQCEEMIGKLGLFSVNET 59

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           K+DISTANLKYILVPY+L EL EK+A +DR+++LKASQAKLKEFISFCE MELVPEEE+E
Sbjct: 60  KEDISTANLKYILVPYYLAELTEKVADNDRIKVLKASQAKLKEFISFCETMELVPEEEIE 119

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
              Q    +  D+RA+KIARFKRQRAAESKL EIKERKERRGRST+AAA S+PVE  E+D
Sbjct: 120 TSTQGGANSSVDRRAKKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSSPVETEEDD 179

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
           VLDDDGEEEREAWLTTISL +CKA DLLEMLKKEE++LSAVKE+QL+ GE+EFS+ +LDE
Sbjct: 180 VLDDDGEEEREAWLTTISLGLCKAFDLLEMLKKEEEILSAVKEKQLQNGEKEFSQAILDE 239

Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
           R+KK E+WHRDAA RA YTKPA PITCATFAQDV+EGRAKVSQAHEHKHQP+IFGPASLV
Sbjct: 240 RTKKVETWHRDAAARAHYTKPAAPITCATFAQDVIEGRAKVSQAHEHKHQPLIFGPASLV 299

Query: 301 GGGLTSERERMAAQVFQPMHR 321
           G   T+ERE++AAQVFQP +R
Sbjct: 300 GRNPTTEREKIAAQVFQPHYR 320

Source: Nicotiana benthamiana

Species: Nicotiana benthamiana

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463963|ref|XP_003602263.1| PP2A regulatory subunit TAP46 [Medicago truncatula] gi|355491311|gb|AES72514.1| PP2A regulatory subunit TAP46 [Medicago truncatula] gi|388516705|gb|AFK46414.1| unknown [Medicago truncatula]

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/322 (74%), Positives = 278/322 (86%), Gaps = 1/322 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE+  E++PLP+LFE+ RKIH  ATESG D + V+KGCE L KCE+MV +LGLFS+NET
Sbjct: 1   MGEMKMEDMPLPALFEQARKIHATATESGADQELVKKGCEALNKCENMVNRLGLFSANET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           K+DIST +LKYILVPY+L EL EKIA DDR+ ILKASQAKLKEFISFCE MELVP+EELE
Sbjct: 61  KEDISTTDLKYILVPYYLAELTEKIAHDDRIPILKASQAKLKEFISFCEAMELVPKEELE 120

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
           +  Q  P A  DQRA+KIARFKRQ+AAESKL EI ERKERRGRST+AAA S PVEAGEE+
Sbjct: 121 SYMQGVPKAVADQRAKKIARFKRQKAAESKLLEINERKERRGRSTKAAALSTPVEAGEEE 180

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLK-GGEEEFSEVVLD 239
            LDDDGEEEREAW T+ISLA+CKA DLLEM+KKEE+MLSAVK+RQ K  G +EFS+ ++D
Sbjct: 181 QLDDDGEEEREAWNTSISLAICKAFDLLEMIKKEEEMLSAVKDRQSKEDGNQEFSKDIMD 240

Query: 240 ERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASL 299
           ER+KKAE+WHR+AA+RAQYTKP+ PITCATFAQDVLEGRA+ SQAHEHKHQP+IFGP SL
Sbjct: 241 ERAKKAEAWHRNAAVRAQYTKPSPPITCATFAQDVLEGRAQASQAHEHKHQPLIFGPQSL 300

Query: 300 VGGGLTSERERMAAQVFQPMHR 321
           V G  T+ER RMAAQVFQP HR
Sbjct: 301 VNGSFTNERARMAAQVFQPSHR 322

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461893|ref|XP_004148676.1| PREDICTED: PP2A regulatory subunit TAP46-like [Cucumis sativus] gi|449517531|ref|XP_004165799.1| PREDICTED: PP2A regulatory subunit TAP46-like [Cucumis sativus]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/315 (75%), Positives = 275/315 (87%), Gaps = 2/315 (0%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIST 66
           E+LPLPS+FE+GRKIH  ATES  D DAVRKGCE L KCEDM+GKLGLFS+NETK+DIST
Sbjct: 2   EDLPLPSIFEQGRKIHNAATESALDQDAVRKGCEALRKCEDMIGKLGLFSANETKEDIST 61

Query: 67  ANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAK 126
            NLKYILVP++L EL EKI QDDR+ +L+ASQAKLKEFISFCE MELVP+EEL+   +  
Sbjct: 62  GNLKYILVPFYLAELTEKIVQDDRIPLLRASQAKLKEFISFCETMELVPQEELQTFTEG- 120

Query: 127 PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 186
             +  D+RARKIARFKRQ+AAESKL EIKERKERRGRS++A+A SAP+EAGEEDVLDDDG
Sbjct: 121 -NSLADRRARKIARFKRQKAAESKLHEIKERKERRGRSSKASALSAPIEAGEEDVLDDDG 179

Query: 187 EEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAE 246
           EEEREAWLTTI+LA+CKA DLLEMLKKEE+MLS++KE++ K G + FS  +LD+R K+AE
Sbjct: 180 EEEREAWLTTINLAICKAFDLLEMLKKEEEMLSSIKEKEEKDGNKNFSREILDDRMKRAE 239

Query: 247 SWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS 306
           +WHRD  +RA+YTKP+ PITCATFAQDVLEGRA VSQAHEHKHQPMIFGPASLV G LTS
Sbjct: 240 AWHRDGVVRARYTKPSPPITCATFAQDVLEGRANVSQAHEHKHQPMIFGPASLVNGPLTS 299

Query: 307 ERERMAAQVFQPMHR 321
           ERER+AAQVFQP  R
Sbjct: 300 ERERLAAQVFQPGFR 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516069|ref|XP_003526719.1| PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/316 (75%), Positives = 275/316 (87%), Gaps = 1/316 (0%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPD-AVRKGCEVLEKCEDMVGKLGLFSSNETKDDIS 65
           E++PLP+LFE+ RKIH  AT +    D  V+KGCE L +CEDMV  LGLFS NETK+DIS
Sbjct: 2   EDVPLPALFEQARKIHNSATATASAADQVVKKGCEALHRCEDMVNNLGLFSPNETKEDIS 61

Query: 66  TANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQA 125
           T NLKYILVP++L EL EK+AQDDR+ ILKASQAKLKEFISFCE MELVP+EELE+  + 
Sbjct: 62  TTNLKYILVPFYLAELTEKLAQDDRIHILKASQAKLKEFISFCEAMELVPKEELESYIEG 121

Query: 126 KPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDD 185
                 DQRARKIARFKRQRAAESKL EIKE+KERRGRST+AAA S PVEAGEE+VLDDD
Sbjct: 122 ASKTVADQRARKIARFKRQRAAESKLLEIKEQKERRGRSTKAAALSTPVEAGEEEVLDDD 181

Query: 186 GEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKA 245
           GEEEREAW+TTISLA+CKALDLL+MLKKEE+MLSAVK+RQ K G++EFS+ VLDER+KKA
Sbjct: 182 GEEEREAWITTISLAICKALDLLDMLKKEEEMLSAVKDRQSKDGDKEFSKDVLDERAKKA 241

Query: 246 ESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLT 305
           E+WH D+A+RA+YTKP+ PITCATFAQDVLEGRAK SQAH+HKHQP+IFGPASLV G +T
Sbjct: 242 EAWHHDSAVRARYTKPSSPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLVNGNIT 301

Query: 306 SERERMAAQVFQPMHR 321
           +ERERMAAQVFQP HR
Sbjct: 302 TERERMAAQVFQPSHR 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826027|ref|XP_002880896.1| hypothetical protein ARALYDRAFT_901608 [Arabidopsis lyrata subsp. lyrata] gi|297326735|gb|EFH57155.1| hypothetical protein ARALYDRAFT_901608 [Arabidopsis lyrata subsp. lyrata]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/321 (73%), Positives = 280/321 (87%), Gaps = 1/321 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG +S EELPL +LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKLGLFSSNET
Sbjct: 1   MGGLSMEELPLSALFEQARKIHLAASESGTDQDVVKKGCEMFQKCEDMIGKLGLFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE MELVP+EELE
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
           A +++   A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GEED
Sbjct: 121 ASSRSS-GAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEED 179

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
           + DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE+ FS   LD+
Sbjct: 180 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEDGFSRDALDD 239

Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
           R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ H+HK+QP+IFGPAS+V
Sbjct: 240 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHDHKNQPLIFGPASIV 299

Query: 301 GGGLTSERERMAAQVFQPMHR 321
           GG L++ERERM AQVFQP HR
Sbjct: 300 GGPLSTERERMIAQVFQPSHR 320

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584076|ref|XP_002532781.1| PP2A regulatory subunit TAP46, putative [Ricinus communis] gi|223527469|gb|EEF29600.1| PP2A regulatory subunit TAP46, putative [Ricinus communis]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/314 (77%), Positives = 276/314 (87%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIST 66
           E+LPLP+LFE+  KIH  ATESG D + V+KGCE L KCE+M+ KLGLFS NETKDDIST
Sbjct: 2   EDLPLPALFEQAHKIHAAATESGADQEMVKKGCEALHKCEEMINKLGLFSVNETKDDIST 61

Query: 67  ANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAK 126
           +NLKY LVPY+L EL EKIAQDDR+QILKASQAKLKEF+SFCE MELVP+EEL+A +Q  
Sbjct: 62  SNLKYTLVPYYLAELTEKIAQDDRIQILKASQAKLKEFLSFCEAMELVPQEELQASSQGG 121

Query: 127 PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 186
             +F ++RA+KIARF RQRAA++KL EIKERKERRGRS RA A S PVEAGEEDVLDDDG
Sbjct: 122 SNSFAERRAQKIARFNRQRAAQAKLLEIKERKERRGRSNRATALSTPVEAGEEDVLDDDG 181

Query: 187 EEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAE 246
           EEEREAWLTTISLA+CKA DLLE+LK+EE+MLSAVKERQLK G++EFS+ VLD+R+K AE
Sbjct: 182 EEEREAWLTTISLAICKAFDLLELLKREEEMLSAVKERQLKEGDKEFSQAVLDDRTKNAE 241

Query: 247 SWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS 306
           +WHR AA RA YTKPA PITCATFAQDVLEGRA+VSQAH+HKHQPMIFGPASLVGG LTS
Sbjct: 242 AWHRGAATRALYTKPAPPITCATFAQDVLEGRAQVSQAHDHKHQPMIFGPASLVGGSLTS 301

Query: 307 ERERMAAQVFQPMH 320
           ERERM AQVFQP H
Sbjct: 302 ERERMVAQVFQPTH 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423459|ref|NP_568783.1| PP2A regulatory subunit TAP46 [Arabidopsis thaliana] gi|83305913|sp|Q8LDQ4.2|TAP46_ARATH RecName: Full=PP2A regulatory subunit TAP46; AltName: Full=2A phosphatase-associated protein of 46 kDa gi|5107033|gb|AAD39930.1|AF133708_1 PP2A regulatory subunit [Arabidopsis thaliana] gi|28393350|gb|AAO42099.1| putative PP2A regulatory subunit [Arabidopsis thaliana] gi|29824349|gb|AAP04135.1| putative PP2A regulatory subunit [Arabidopsis thaliana] gi|332008905|gb|AED96288.1| PP2A regulatory subunit TAP46 [Arabidopsis thaliana]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/321 (72%), Positives = 276/321 (85%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG ++ EE+PL  LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1   MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE MELVP+EELE
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
           A ++    A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180

Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
           + DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE  FS   LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240

Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
           R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300

Query: 301 GGGLTSERERMAAQVFQPMHR 321
           GG L++ERERM AQVFQP HR
Sbjct: 301 GGPLSTERERMIAQVFQPSHR 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
TAIR|locus:2168392	405	TAP46 "2A phosphatase associat	0.987	0.792	0.623	7.9e-101
UNIPROTKB|P78318	339	IGBP1 "Immunoglobulin-binding	0.467	0.448	0.317	8.7e-12
MGI|MGI:1346500	340	Igbp1 "immunoglobulin (CD79A)	0.464	0.444	0.308	6.5e-11
RGD|62011	340	Igbp1 "immunoglobulin (CD79A)	0.476	0.455	0.314	8.9e-11
UNIPROTKB|O08836	340	Igbp1 "Immunoglobulin-binding	0.476	0.455	0.314	8.9e-11
POMBASE|SPCC63.05	323	SPCC63.05 "TAP42 family protei	0.455	0.458	0.272	4.1e-10
UNIPROTKB|E2QS55	345	IGBP1 "Uncharacterized protein	0.464	0.437	0.290	5e-10
UNIPROTKB|K7GLH9	174	IGBP1 "Uncharacterized protein	0.310	0.580	0.330	6.2e-10
UNIPROTKB|F6UMY5	390	IGBP1 "Uncharacterized protein	0.464	0.387	0.290	6.9e-10
UNIPROTKB|K7GQ35	339	IGBP1 "Uncharacterized protein	0.464	0.445	0.284	1.4e-09

TAIR|locus:2168392 TAP46 "2A phosphatase associated protein of 46 kD" [Arabidopsis thaliana (taxid:3702)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 200/321 (62%), Positives = 235/321 (73%)

Query:     1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
             MG ++ EE+PL  LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct:     1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60

Query:    61 KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMXXXXXXXXX 120
             K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE M         
Sbjct:    61 KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query:   121 XXXQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPXXXXXXX 180
                +    A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S P       
Sbjct:   121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180

Query:   181 XXXXXXXXXXXAWLTTISLAVCKAXXXXXXXXXXXXXXSAVKERQLKGGEEEFSEVVLDE 240
                        AWL++I+LA+CKA              SA+KERQLK GE  FS   LD+
Sbjct:   181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240

Query:   241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
             R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct:   241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300

Query:   301 GGGLTSERERMAAQVFQPMHR 321
             GG L++ERERM AQVFQP HR
Sbjct:   301 GGPLSTERERMIAQVFQPSHR 321

GO:0005737 "cytoplasm" evidence=ISM

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=ISS

GO:0009408 "response to heat" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

UNIPROTKB|P78318 IGBP1 "Immunoglobulin-binding protein 1" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 55/173 (31%), Positives = 90/173 (52%)

Query:     8 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
             +LP LP LFE GR++    ++ATE   S    + V KG ++LEK  +M+ +L LFS NE 
Sbjct:     8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67

Query:    61 KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC--------EI- 110
              ++I++ +LKY+LVP F G L ++++    RL  L+ ++     +++ C        E+ 
Sbjct:    68 LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELP 127

Query:   111 --MXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
               M             A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   128 KTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180

GO:0042113 "B cell activation" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005737 "cytoplasm" evidence=NAS

GO:0007165 "signal transduction" evidence=NAS

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IDA

GO:0060632 "regulation of microtubule-based movement" evidence=IMP

GO:0070555 "response to interleukin-1" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0034612 "response to tumor necrosis factor" evidence=IMP

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IMP

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1346500 Igbp1 "immunoglobulin (CD79A) binding protein 1" [Mus musculus (taxid:10090)]

 Score = 172 (65.6 bits), Expect = 6.5e-11, P = 6.5e-11
 Identities = 53/172 (30%), Positives = 83/172 (48%)

Query:     9 LP-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC-----------E 109
             ++I++ +LKY++VP   G L ++++    RL  L+ ++     F++ C           +
Sbjct:    70 EEIASTDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQ 129

Query:   110 IMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                            A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKTNSAENNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=ISO

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IPI

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=ISO

GO:0034612 "response to tumor necrosis factor" evidence=ISO

GO:0035306 "positive regulation of dephosphorylation" evidence=IMP

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IDA

GO:0042113 "B cell activation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0060632 "regulation of microtubule-based movement" evidence=ISO

GO:0070555 "response to interleukin-1" evidence=ISO

RGD|62011 Igbp1 "immunoglobulin (CD79A) binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 171 (65.3 bits), Expect = 8.9e-11, P = 8.9e-11
 Identities = 56/178 (31%), Positives = 86/178 (48%)

Query:     5 SREEL--P-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLF 55
             S EEL  P LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LF
Sbjct:     4 SEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLF 63

Query:    56 SSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC------ 108
             S NE  ++I++ +LKY++VP   G L ++++    RL  L+ ++     F++ C      
Sbjct:    64 SRNEDLEEIASIDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVA 123

Query:   109 -----EIMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                  +               A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   124 EFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA;ISO

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA;ISO

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IEA;ISO

GO:0034612 "response to tumor necrosis factor" evidence=IEA;ISO

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA;ISO

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA;ISO

GO:0042113 "B cell activation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA;ISO

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0060632 "regulation of microtubule-based movement" evidence=IEA;ISO

GO:0070555 "response to interleukin-1" evidence=IEA;ISO

UNIPROTKB|O08836 Igbp1 "Immunoglobulin-binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 171 (65.3 bits), Expect = 8.9e-11, P = 8.9e-11
 Identities = 56/178 (31%), Positives = 86/178 (48%)

Query:     5 SREEL--P-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLF 55
             S EEL  P LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LF
Sbjct:     4 SEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLF 63

Query:    56 SSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC------ 108
             S NE  ++I++ +LKY++VP   G L ++++    RL  L+ ++     F++ C      
Sbjct:    64 SRNEDLEEIASIDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVA 123

Query:   109 -----EIMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                  +               A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   124 EFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IEA

GO:0034612 "response to tumor necrosis factor" evidence=IEA

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0060632 "regulation of microtubule-based movement" evidence=IEA

GO:0070555 "response to interleukin-1" evidence=IEA

POMBASE|SPCC63.05 SPCC63.05 "TAP42 family protein involved in TOR signalling (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 165 (63.1 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 42/154 (27%), Positives = 75/154 (48%)

Query:    13 SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
             SL E   +  ++   S  D     +  E  EKC  +V +L +FSSNE  D+I T+ L+Y+
Sbjct:     5 SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64

Query:    73 LVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMXXXXXXXXXXXXQAKPTAFTD 132
             ++ Y L + +E+  + DRL+ ++ ++   + F+S C+                KP    D
Sbjct:    65 MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICD------DYGLKPMQDEKPKTEAD 118

Query:   133 QRARKIARFKRQRAAESKLQEIKERKERRGRSTR 166
              R  KIAR++ ++  E +L+ + +  E      R
Sbjct:   119 TRTLKIARYRMRQNLEKELKALSKDSETNEEQER 152

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0031929 "TOR signaling cascade" evidence=ISO

UNIPROTKB|E2QS55 IGBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 50/172 (29%), Positives = 86/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVSKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMXXX------ 114
             ++I++ +LKY++VP F G L ++++    RL  L+ ++     +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGALTMKQVNPSKRLDHLEWAREHFLNYLTQCQYYHVAEFELPK 129

Query:   115 -----XXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKNNSTDNNTASSSMAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|K7GLH9 IGBP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 146 (56.5 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 36/109 (33%), Positives = 66/109 (60%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:     3 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVVKGLDLLKKAAEMLSQLDLFSRNEDL 62

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCE 109
             ++I++ +LKY++VP F G   ++++    RL+ L+ ++     +++ C+
Sbjct:    63 EEIASTDLKYLMVPAFQGAFALKQVNLSKRLEHLQWAREHFSNYLTQCQ 111

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|F6UMY5 IGBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 50/172 (29%), Positives = 86/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVSKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMXXX------ 114
             ++I++ +LKY++VP F G L ++++    RL  L+ ++     +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGALTMKQVNPSKRLDHLEWAREHFLNYLTQCQYYHVAEFELPK 129

Query:   115 -----XXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKNNSTDNNTASSSMAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|K7GQ35 IGBP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 161 (61.7 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 49/172 (28%), Positives = 86/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVVKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIM--------- 111
             ++I++ +LKY++VP F G   ++++    RL+ L+ ++     +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGAFALKQVNLSKRLEHLQWAREHFSNYLTQCQYYHVAEFELPK 129

Query:   112 --XXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 159
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKTNSAENNTANSSVAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LDQ4	TAP46_ARATH	No assigned EC number	0.7258	0.9876	0.7925	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037249001 SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (403 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	325
pfam04177	335	pfam04177, TAP42, TAP42-like family	4e-61

>gnl|CDD|217940 pfam04177, TAP42, TAP42-like family

 Score =  197 bits (504), Expect = 4e-61
 Identities = 93/327 (28%), Positives = 151/327 (46%), Gaps = 68/327 (20%)

Query: 10  PLPSLFERGRKIH----QIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIS 65
            L  LF+   K+     + A++S    D V+K  E+LEK   +V +L LFSSNET +DIS
Sbjct: 1   SLSELFDEALKLFDELEESASDSEEYQDKVKKTIELLEKATRLVSQLSLFSSNETLEDIS 60

Query: 66  TANLKYILVPYFLGELIEK-IAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQ 124
           T++LKY+L+PY+LGEL ++ I   DRL+IL+A++  LK+F+S  +  EL+ +E  + + +
Sbjct: 61  TSSLKYLLLPYYLGELTQRLINNSDRLKILEAAKQYLKDFLSRLDDYELLDKELKKLLER 120

Query: 125 AK---------PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVE 175
            +          +    +R  KIARFKR++  E KL+E+K+R ER               
Sbjct: 121 YESASESSSLELSDPALRRQEKIARFKREKELEEKLKELKKRVERAQD------------ 168

Query: 176 AGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSE 235
                   DD E  RE +L  ++LA+ K+ + LE + +E ++L     R+          
Sbjct: 169 -------SDDEELVRELYLAQLNLAILKSFEELESISQELELLKNRPARKESPESPPAE- 220

Query: 236 VVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFG 295
                                        I   T   D LEG           ++P++  
Sbjct: 221 ------------------------PERLSIDDPTGYTDRLEG---------PLNKPLLSK 247

Query: 296 PASLVGG-GLTSERERMAAQVFQPMHR 321
           P   +    + S R+ +  +VF P + 
Sbjct: 248 PGKPLQPFTILSTRQELQKKVFGPGYP 274

The TOR signalling pathway activates a cell-growth program in response to nutrients. TIP41 (pfam04176) interacts with TAP42 and negatively regulates the TOR signaling pathway. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	325
PF04177	340	TAP42: TAP42-like family; InterPro: IPR007304 The	100.0
KOG2830	324	consensus Protein phosphatase 2A-associated protei	100.0
KOG2830	324	consensus Protein phosphatase 2A-associated protei	94.8
PF04177	340	TAP42: TAP42-like family; InterPro: IPR007304 The	93.43

>PF04177 TAP42: TAP42-like family; InterPro: IPR007304 The TOR signalling pathway activates a cell-growth program in response to nutrients []

Probab=100.00  E-value=1e-60  Score=463.42  Aligned_cols=264  Identities=34%  Similarity=0.475  Sum_probs=173.5

Q ss_pred             CHHHHHHHHHHHhh------hhccCCCcHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhhHhhc
Q 020484           10 PLPSLFERGRKIHQ------IATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIE   83 (325)
Q Consensus        10 sL~~lF~~a~~~~~------~~~~s~~~Q~~l~~~i~~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg~L~~   83 (325)
                      ||+++|..|+++|.      .+.+|+++|+.|+++|+.|+.|+.+|+++||||+||++|||+|++|+||+||||||.|+.
T Consensus         1 ~L~~lf~~~~~~~~~le~~~~~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~ledIsT~~LkyLllpy~Lg~L~~   80 (340)
T PF04177_consen    1 SLSELFDEALKLYDELENSSLPSSSPEYQEKVKSAIADLEKAQKMVSQLSLFSSNEELEDISTSDLKYLLLPYYLGELTL   80 (340)
T ss_dssp             -HHHHHHHHHHHHHHCCC-SS-TTSHHHHHHHHHHHHHHHHHHHHHCCCTCCHCSSSCCCS-CCCHGGGGHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccccchhHHHHHHHHHHHHH
Confidence            69999999999996      366788999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChhHHHHHhhc----------CCcchHHHHHHHHHHHHHHHHHHHHHH
Q 020484           84 K-IAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQA----------KPTAFTDQRARKIARFKRQRAAESKLQ  152 (325)
Q Consensus        84 k-~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~----------~~~~~a~~R~~KIarfK~eKel~~kL~  152 (325)
                      + ....+|+.+|+.|+.||.+||++|++|||+++++...+...          .+.+|+.+|+.||+|||++|+|+++|.
T Consensus        81 k~~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~KI~r~K~eKel~~~L~  160 (340)
T PF04177_consen   81 KLSNPEDRLEILKRAKEYYIEFLKRCEDYGLLDKDDPKLLESYQDNPSSSSSSSLSDPAARRNEKIARFKREKELEQKLK  160 (340)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHCCHHHTT-S-HHHHHHHHT-HHS---SSCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             hhcCchhHHHHHHHHHHHHHHHHHHHHHCCCCChhHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9 56789999999999999999999999999999988766533          467999999999999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcccCCCCc
Q 020484          153 EIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEE  232 (325)
Q Consensus       153 ~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l~~~~a~~~Lesi~~ElemL~~~~~~~~~~~~~~  232 (325)
                      .|++....                   +.+++|||++|++||++|++|+++|+++|+||.+|++||+++++++.......
T Consensus       161 ~l~~~~~~-------------------~~~~~DEE~~Re~~l~~L~~~~~~s~~~l~si~~El~mL~~~~~~~~~~~~~~  221 (340)
T PF04177_consen  161 ELEKRRES-------------------DDDDDDEEIEREYYLLLLKLWVLKSLEELESIEQELEMLEMRPKMKEAPESEP  221 (340)
T ss_dssp             HHHHHHHT-------------------TTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTT----------
T ss_pred             HHHHhhcc-------------------cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcc
Confidence            99986541                   12467899999999999999999999999999999999999998876642211


Q ss_pred             chhhhhhhhhhhhhhhhhhhHHhhhcCCCCCCcchhhhhhhhhhccccccccccccCCCccccCccccCCCCchHHHHHH
Q 020484          233 FSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMA  312 (325)
Q Consensus       233 ~~~~~~d~r~~~~~~~~rd~~~~~~~~~p~~P~t~~~~~q~v~~g~~~~~~~~~~~~~p~~~~P~~~~~~~~~~~R~~l~  312 (325)
                      ......+........|+.+.                        +..+++..  ..|+|+  +||||+     +.|++++
T Consensus       222 ~~~~~~~~~~~~~~~~~l~~------------------------~~~~pl~~--~~~~~l--~pfti~-----~~R~~~~  268 (340)
T PF04177_consen  222 SQDERDDEPDADGYSDRLES------------------------PKPGPLLS--KPGKPL--KPFTIT-----STREQLQ  268 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccc------------------------cCCCCCCC--CCCCCC--CCcccH-----HHHHHHH
Confidence            00000000000123333222                        22223322  337887  999986     7999999


Q ss_pred             hccCCCCCCCCCC
Q 020484          313 AQVFQPMHRNVLW  325 (325)
Q Consensus       313 ~~VF~p~h~LPT~  325 (325)
                      ++||+|||+||||
T Consensus       269 ~~VFgpg~~LPTM  281 (340)
T PF04177_consen  269 KKVFGPGHPLPTM  281 (340)
T ss_dssp             -------------
T ss_pred             HHhcCCCCCCCcC
Confidence            9999999999999

TIP41 interacts with TAP42 and negatively regulates the TOR signalling pathway [].; GO: 0009966 regulation of signal transduction; PDB: 3QC1_A 2V0P_A.

>KOG2830 consensus Protein phosphatase 2A-associated protein [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-42  Score=322.27  Aligned_cols=258  Identities=32%  Similarity=0.441  Sum_probs=214.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhhH
Q 020484            1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGE   80 (325)
Q Consensus         1 ~~~~~~~~~sL~~lF~~a~~~~~~~~~s~~~Q~~l~~~i~~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg~   80 (325)
                      |+++++...++..||+...+.+.....+..+|..+.+.|..+..|+.||++|+|||+||++|||||++||||+||||||.
T Consensus         1 Ma~~~e~~~~~~~L~d~~~~~~~~~~E~~~~~~~~~~~i~q~~~~t~m~~ql~lFSsNE~iedIsT~sLkyLlVpyflg~   80 (324)
T KOG2830|consen    1 MASLDELELPLQKLYDLSLKGKQLRDESEVATEPVLKRIKQLKVATEMVNQLALFSSNETIEDISTNSLKYLLVPYFLGK   80 (324)
T ss_pred             CcchhhhccchhhhHHHHHHhHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhccccccchhhhHHHHHH
Confidence            78889999999999888888777777888999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChhHH---------HHH----hhcCCcchHHHHHHHHHHHHHHHHH
Q 020484           81 LIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEEL---------EAV----AQAKPTAFTDQRARKIARFKRQRAA  147 (325)
Q Consensus        81 L~~k~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~---------~~~----~~~~~~~~a~~R~~KIarfK~eKel  147 (325)
                      |++|+.+.+|+..|+.|..+|..||.+|+.|+|++....         .+.    .......++..|..||+||+++||+
T Consensus        81 Lt~k~~~~~~~~~lk~a~~~f~~~ls~c~~y~L~~~~~~k~~~~~~~~~~~~s~~~~~~l~~~~~~r~~Kier~~r~kEl  160 (324)
T KOG2830|consen   81 LTEKQINEDRLDHLKLAEEHFINFLSRCQDYHLAPFELPKTKNNAADRALKISRMAEKSLVEAALKRQKKIERYKRKKEL  160 (324)
T ss_pred             HHHHhhcCchHHHHHHHHHHHHHHHHHHhccCccchhhccccCchhHHHHHHhhhccchhHHHHHHHHhHHHHHHHHHHH
Confidence            999988888899999999999999999999999654322         111    2245678999999999999999999


Q ss_pred             HHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 020484          148 ESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISL-AVCKALDLLEMLKKEEDMLSAVKERQL  226 (325)
Q Consensus       148 ~~kL~~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l-~~~~a~~~Lesi~~ElemL~~~~~~~~  226 (325)
                      +.+|..++..                |+++     .+||+.+|++|++++.. |+-.+++++++|.+|+.+|+.....+-
T Consensus       161 ~~~l~~~~~a----------------ve~~-----~~Dde~lrelyl~~l~~~~~d~~lee~E~i~~e~r~lkE~~s~r~  219 (324)
T KOG2830|consen  161 KHRLTRMQSA----------------VEDG-----QDDDEHLRELYLLQLQRGWIDISLEEEESIDQEERLLKEGESSRD  219 (324)
T ss_pred             HHHHHHHHHh----------------hhcC-----CCchHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHhccccccc
Confidence            9999999852                4443     45677799999999999 999999999999999999994433321


Q ss_pred             cCCCCcchhhhhhhhhhhhhhhhhhhHHhhhcCC--CCCCc-chhh-hhhhhhhccccc
Q 020484          227 KGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTK--PAQPI-TCAT-FAQDVLEGRAKV  281 (325)
Q Consensus       227 ~~~~~~~~~~~~d~r~~~~~~~~rd~~~~~~~~~--p~~P~-t~~~-~~q~v~~g~~~~  281 (325)
                      .. .+..+.....+ +.+|||++|++.+++|||.  |..|| ||+| |.|.+..|..+.
T Consensus       220 ~s-t~~t~~~e~~p-~~~~fi~~r~~~q~kVfG~Gyp~lPtMsvdE~~~~~~~~g~a~~  276 (324)
T KOG2830|consen  220 PS-TSNTSRGETRP-PLFPFIITRNETQKKVFGLGYPGLPTMTVDEFLDQEFEEGIAKA  276 (324)
T ss_pred             cc-cCccccccCCC-CcchHHHHHHHHhhhhhhcCCCCCccccHHHHHHHHHHhhhccc
Confidence            11 10111111122 3379999999999999987  98899 9999 999998885443

>KOG2830 consensus Protein phosphatase 2A-associated protein [Signal transduction mechanisms]

Probab=94.80  E-value=0.13  Score=49.90  Aligned_cols=30  Identities=27%  Similarity=0.339  Sum_probs=25.3

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020484          127 PTAFTDQRARKIARFKRQRAAESKLQEIKE  156 (325)
Q Consensus       127 ~~~~a~~R~~KIarfK~eKel~~kL~~L~~  156 (325)
                      ...++..|..||++|+...-+...+....+
T Consensus       121 ~~~~~~~~~~~~s~~~~~~l~~~~~~r~~K  150 (324)
T KOG2830|consen  121 TKNNAADRALKISRMAEKSLVEAALKRQKK  150 (324)
T ss_pred             ccCchhHHHHHHhhhccchhHHHHHHHHhH
Confidence            457899999999999999888887776654

>PF04177 TAP42: TAP42-like family; InterPro: IPR007304 The TOR signalling pathway activates a cell-growth program in response to nutrients []

Probab=93.43  E-value=0.059  Score=52.74  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=0.0

Q ss_pred             hhhhh--hhhhHHhhhcCC--CCCCc-chhh-hhhhhhhcccccc
Q 020484          244 KAESW--HRDAAIRAQYTK--PAQPI-TCAT-FAQDVLEGRAKVS  282 (325)
Q Consensus       244 ~~~~~--~rd~~~~~~~~~--p~~P~-t~~~-~~q~v~~g~~~~~  282 (325)
                      +||+|  +|+..++.|||.  | +|| ||+| |.+.+..|..+..
T Consensus       256 ~pfti~~~R~~~~~~VFgpg~~-LPTMTveE~~e~E~~~g~~~~~  299 (340)
T PF04177_consen  256 KPFTITSTREQLQKKVFGPGHP-LPTMTVEEFLEQEMREGNIPQG  299 (340)
T ss_dssp             ---------------------------------------------
T ss_pred             CCcccHHHHHHHHHHhcCCCCC-CCcCcHHHHHHHHHHhccCccc
Confidence            89999  999999999987  5 888 9999 7888888876543

TIP41 interacts with TAP42 and negatively regulates the TOR signalling pathway [].; GO: 0009966 regulation of signal transduction; PDB: 3QC1_A 2V0P_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	325
3qc1_A	243	Protein Phosphatase Subunit: Alpha4 Length = 243		5e-10
2v0p_A	234	The Structure Of Tap42 Alpha4 Subunit Length = 234		9e-06

>pdb|3QC1|A Chain A, Protein Phosphatase Subunit: Alpha4 Length = 243

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 37  FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 96
Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC-----------EIMXXXXX 116
           LKY++VP   G L ++++    RL  L+ ++     F++ C           +       
Sbjct: 97  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 156
Query: 117 XXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIK 155
                   A P   A   QR  KI R+K+++  E +L  +K
Sbjct: 157 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 197

>pdb|2V0P|A Chain A, The Structure Of Tap42 Alpha4 Subunit Length = 234

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 12/73 (16%)
Query: 48  MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDD---------RLQILKASQ 98
           +  +L LFS+NET DD+STA++K++ V Y+LG LI +   +D         +L  LK S 
Sbjct: 49  IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSXKLIYLKKS- 107
Query: 99  AKLKEFISFCEIM 111
             ++ FI+F  ++
Sbjct: 108 --VESFINFLTLL 118

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	325
3qc1_A	243	Immunoglobulin-binding protein 1; PP2A, signaling	1e-41
2v0p_A	234	TAP42, type 2A phosphatase-associated protein 42;	3e-33

>3qc1_A Immunoglobulin-binding protein 1; PP2A, signaling protein; 2.35A {Mus musculus} Length = 243

 Score =  143 bits (362), Expect = 1e-41
 Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 17/228 (7%)

Query: 1   MGEVSREELP--LPSLFERGRKIHQ------IATESGCDPDAVRKGCEVLEKCEDMVGKL 52
           M     E L   LP LFE  +K+ +        T S    D V KG E+LEK   M+ +L
Sbjct: 21  MAASEDELLLPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQL 80

Query: 53  GLFSSNETKDDISTANLKYILVPYFLGELIEKI-AQDDRLQILKASQAKLKEFISFCEIM 111
            LFS NE  ++I++ +LKY++VP   G L  K      RL  L+ ++     F++ C   
Sbjct: 81  DLFSRNEDLEEIASTDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCY 140

Query: 112 ELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPS 171
            +   +  +    +      +  +  +A       A  +  +I+  K+++    R +A  
Sbjct: 141 HVAEFQLPQTKTNSAE---NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 197

Query: 172 APVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLS 219
           + VE+G+      D E  RE  L  +   +  +L+ LE + +E  +L 
Sbjct: 198 SAVESGQA-----DDERVREYHLLHLRRWIAVSLEELESIDQEIKILK 240

>2v0p_A TAP42, type 2A phosphatase-associated protein 42; phosphorylation, signal transduction inhibitor, hydrolase in; 1.80A {Saccharomyces cerevisiae} Length = 234

 Score =  121 bits (305), Expect = 3e-33
 Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 54/245 (22%)

Query: 11  LPSLFERGRKIHQIATESGCDP-------DAVRKGCEVLEKC-EDMVGKLGLFSSNETKD 62
           +   F     ++    E              +    + L      +  +L LFS+NET D
Sbjct: 4   VTEQFNDIISLYSTKLEHTSLRQDSPEYQGLLLSTIKKLLNLKTAIFDRLALFSTNETID 63

Query: 63  DISTANLKYILVPYFLGELIEKIAQDD---------RLQILKASQAKLKEFISFCEIMEL 113
           D+STA++K++ V Y+LG LI +   +D         +L  LK S      F++  +  +L
Sbjct: 64  DVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKSVESFINFLTLLQDYKL 123

Query: 114 VPEEELEAV-------------------AQAKPTAFTDQRARKIARFKRQRAAESKLQEI 154
           +     E +                        +    +R  KI  F+R +   +KL  +
Sbjct: 124 LDPLVGEKLGNFKDRYNPQLSELYAQPKNNKDLSGAQLKRKEKIELFQRNKEISTKLHCL 183

Query: 155 KERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKE 214
           +                  ++  +ED   D  E  RE +L  +       ++ +E    E
Sbjct: 184 ELE----------------LKNNDEDHDHD--ELLRELYLMRLHHFSLDTINNIEQNLFE 225

Query: 215 EDMLS 219
            +MLS
Sbjct: 226 CEMLS 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	325
2v0p_A	234	TAP42, type 2A phosphatase-associated protein 42;	100.0
3qc1_A	243	Immunoglobulin-binding protein 1; PP2A, signaling	100.0

>2v0p_A TAP42, type 2A phosphatase-associated protein 42; phosphorylation, signal transduction inhibitor, hydrolase in; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.4e-52  Score=382.94  Aligned_cols=197  Identities=24%  Similarity=0.284  Sum_probs=168.0

Q ss_pred             CCCHHHHHHHHHHHhh-h------hccCCCcHHHHHHHHH-HHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhh
Q 020484            8 ELPLPSLFERGRKIHQ-I------ATESGCDPDAVRKGCE-VLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLG   79 (325)
Q Consensus         8 ~~sL~~lF~~a~~~~~-~------~~~s~~~Q~~l~~~i~-~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg   79 (325)
                      +.||+++|..|+++|. .      +.+|++||++|+++|+ .|+.|+.+|+++||||+||++|||||++|+||+||||||
T Consensus         1 ~~~L~~lF~~a~~~~~~~le~~~~~~~s~~~Q~~v~~~i~~~le~~~~~v~~l~LFS~NE~leDIsT~~L~yLlvpy~Lg   80 (234)
T 2v0p_A            1 MASVTEQFNDIISLYSTKLEHTSLRQDSPEYQGLLLSTIKKLLNLKTAIFDRLALFSTNETIDDVSTASIKFLAVDYYLG   80 (234)
T ss_dssp             CCCHHHHHHHHHHHHHHHTSSCSSCTTCHHHHHHHHHHHHHHHHHHHHHHTTSCC-----CGGGSCGGGGGGGGHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccccchHHHhHHHHHH
Confidence            3699999999999987 3      4577889999999999 999999999999999999999999999999999999999


Q ss_pred             Hhhcccch---------hhHHHHHHHHHHHHHHHHHHhhhcCCCChhHHHHHhhc-------------------CCcchH
Q 020484           80 ELIEKIAQ---------DDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQA-------------------KPTAFT  131 (325)
Q Consensus        80 ~L~~k~~~---------~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~-------------------~~~~~a  131 (325)
                      +|++|+.+         .+|+.+|+.|+.||.+||++|++|||+++++...+...                   .+.+|+
T Consensus        81 ~L~~k~~~~~~~~~~~~~~R~~~L~~A~~~~~~FL~~l~~y~ll~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~a  160 (234)
T 2v0p_A           81 LLISRRQSNDSDVAQRQSMKLIYLKKSVESFINFLTLLQDYKLLDPLVGEKLGNFKDRYNPQLSELYAQPKNNKDLSGAQ  160 (234)
T ss_dssp             HHHTTCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHTCSSTTSCCHHHHSCCCSSTTCHHHHH
T ss_pred             HHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHhhhccccchhhhhccccccccccccHH
Confidence            99999875         78999999999999999999999999999988766431                   145899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020484          132 DQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEML  211 (325)
Q Consensus       132 ~~R~~KIarfK~eKel~~kL~~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l~~~~a~~~Lesi  211 (325)
                      .+|+.||+|||++|||+++|+.|+.+.                +++.+  +++|||++|++||++|++|+++|+++|+||
T Consensus       161 ~~R~~KI~rfK~eKel~~kL~~L~~~~----------------~~~~~--D~~deE~~Re~~l~~L~~~~~~s~~~Lesi  222 (234)
T 2v0p_A          161 LKRKEKIELFQRNKEISTKLHCLELEL----------------KNNDE--DHDHDELLRELYLMRLHHFSLDTINNIEQN  222 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hcccc--CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998742                22222  345789999999999999999999999999


Q ss_pred             HHHHHHHHhhH
Q 020484          212 KKEEDMLSAVK  222 (325)
Q Consensus       212 ~~ElemL~~~~  222 (325)
                      .+|++||++++
T Consensus       223 ~~ElemL~~~~  233 (234)
T 2v0p_A          223 LFECEMLSNFL  233 (234)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHhcc
Confidence            99999999875

>3qc1_A Immunoglobulin-binding protein 1; PP2A, signaling protein; 2.35A {Mus musculus}

Probab=100.00  E-value=3.9e-52  Score=384.67  Aligned_cols=195  Identities=30%  Similarity=0.448  Sum_probs=167.5

Q ss_pred             CCCCCHHHHHHHHHHHhhh------hccCCCcHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhh
Q 020484            6 REELPLPSLFERGRKIHQI------ATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLG   79 (325)
Q Consensus         6 ~~~~sL~~lF~~a~~~~~~------~~~s~~~Q~~l~~~i~~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg   79 (325)
                      ..+.+|+++|..|+++|..      +++|++||++|+++|+.|+.|+.+|+++||||+||++|||+|++|+||+||||||
T Consensus        28 ~~~~~L~~lF~~a~~~~~~le~~~~~~~S~~~Q~~v~~~i~~le~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg  107 (243)
T 3qc1_A           28 LLLPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTDLKYLMVPALQG  107 (243)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHCCSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSSCSTTSCTTTGGGGGHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccccccccchHhhHHHHHH
Confidence            4467999999999999863      6688899999999999999999999999999999999999999999999999999


Q ss_pred             Hhhcccchh-hHHHHHHHHHHHHHHHHHHhhhcCCCChh----HHHHHhh---------cCCcchHHHHHHHHHHHHHHH
Q 020484           80 ELIEKIAQD-DRLQILKASQAKLKEFISFCEIMELVPEE----ELEAVAQ---------AKPTAFTDQRARKIARFKRQR  145 (325)
Q Consensus        80 ~L~~k~~~~-~R~~~L~~A~~~~~~FL~~~~~y~ll~~~----~~~~~~~---------~~~~~~a~~R~~KIarfK~eK  145 (325)
                      +|+.|+.+. .|+.+|+.|+.||.+||++|++|||++++    .....+.         ..+.+|+.+|+.||+|||++|
T Consensus       108 ~L~~k~~~~~~Rl~~L~~A~~~~~~FL~~l~~Y~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~rR~~KI~rfK~eK  187 (243)
T 3qc1_A          108 ALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAENNTASSSMAYPNLVAMASQRQAKIERYKQKK  187 (243)
T ss_dssp             HHHTTCCCGGGHHHHHHHHHHHHHHHHTTCCCCC-----------------------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcccchhhhcccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence            999998755 59999999999999999999999999652    1111111         124589999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 020484          146 AAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAV  221 (325)
Q Consensus       146 el~~kL~~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l~~~~a~~~Lesi~~ElemL~~~  221 (325)
                      ||++||+.|++..+                +     +++|||.+|++||++|++|+++|+++|+||++|++||+++
T Consensus       188 eLe~kL~~L~~~~e----------------~-----~~~DeE~~Re~yL~~L~l~~~~s~~~Lesi~~EleiL~~r  242 (243)
T 3qc1_A          188 EVEHRLSALKSAVE----------------S-----GQADDERVREYHLLHLRRWIAVSLEELESIDQEIKILKEK  242 (243)
T ss_dssp             HHHHHHHHHHHHHH----------------H-----TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHh----------------c-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999987643                1     2468999999999999999999999999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00