Citrus Sinensis ID: 020583


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
cccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHEEccccccccccccccccccccHHHHcccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHcHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEEccccHHHHHHHccccccccccEEEEEccccccccccHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHcc
ccccHHHHHHHHHccccccccccccccHHHHEEEEHHHHHHHHHHEEcccccEEcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEccccccccccccccEEccccccEccccccccccccccccEEEEEEEcHcHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHcccEEccccccccccEEEEEEEEccccEEEEEEEccccccccccccccHHHHHEcccHccHHHHHHHHHHHcc
MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIgvsfptlsltkltlpssllptveyvedqrsglstqrflnvfnplnrnngsstraqvlndtskiwvptnprgaerlppkivraESDFYLRrlwgnpnedltsqpkYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHydgrttewnefewsKRAIHVSVRKQTKWwyakrflhpdivasyDYIFiwdedlgvehfNAEEYIKLVRKHgleisqpglepnkgltwqmtkrrgdrevhketeekpgwcsnphlppcaaFVEIMAPVFSRDAWRCVWHMIQV
mlrscenqkilnkmgtaarssinrktnesMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFnplnrnngsstraqvlndtskiwvptnprgaerlppkivRAESDFYLRRLWgnpnedltsqpKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGleisqpglepnkgltwqmtkRRGDREVHKeteekpgwcsnphLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
MLRSCENQKILNKMGTAARSSINRKTNESMRLivttfvgvvfgffigvSFptlsltkltlpssllptVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
*****************************MRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPL***************TSKIWVPT*********PKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEI*********************************WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMI**
********************************IVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQR**LSTQRFL****************************************IVRAESDFYL****************YLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTK****************WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQM******************WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
***SCE*QK**NK****ARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNR************DTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
359473149 491 PREDICTED: uncharacterized protein LOC10 0.929 0.613 0.810 1e-146
356567576399 PREDICTED: uncharacterized protein LOC10 0.941 0.764 0.788 1e-145
356540241399 PREDICTED: uncharacterized protein LOC10 0.941 0.764 0.788 1e-145
356525441397 PREDICTED: uncharacterized protein LOC10 0.935 0.763 0.782 1e-145
356512666397 PREDICTED: uncharacterized protein LOC10 0.935 0.763 0.778 1e-144
296081357385 unnamed protein product [Vitis vinifera] 0.898 0.755 0.817 1e-143
357463241399 hypothetical protein MTR_3g086610 [Medic 0.938 0.761 0.766 1e-141
255578345395 conserved hypothetical protein [Ricinus 0.929 0.762 0.75 1e-141
388518623399 unknown [Medicago truncatula] 0.938 0.761 0.766 1e-140
449450058402 PREDICTED: uncharacterized protein LOC10 0.950 0.766 0.769 1e-140
>gi|359473149|ref|XP_002282407.2| PREDICTED: uncharacterized protein LOC100243914 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/306 (81%), Positives = 271/306 (88%), Gaps = 5/306 (1%)

Query: 20  SSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVE--YVEDQRSG 77
           S I RK NE+MRLIVT  VGVVFGF IG+SFPTLS+TKL LPSSLLP V+  Y+ D+ SG
Sbjct: 97  SVIVRKPNETMRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLLPNVDIAYIRDKSSG 156

Query: 78  LSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRL 137
            STQ  L+  +    N    T+AQ LN TSKIW P+NPRGAERLPP IV AESDFYLRRL
Sbjct: 157 FSTQALLDALSSAKYNR---TQAQNLNGTSKIWAPSNPRGAERLPPGIVAAESDFYLRRL 213

Query: 138 WGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSK 197
           WG P+EDLT +PKYLVTFTVGYDQK N++AA+KKFS++FTI+LFHYDGRTTEW+EFEWSK
Sbjct: 214 WGKPSEDLTIKPKYLVTFTVGYDQKKNVDAAVKKFSEDFTILLFHYDGRTTEWDEFEWSK 273

Query: 198 RAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEIS 257
           RAIHVSVR+QTKWWYAKRFLHPDIVA YDYIFIWDEDLGVEHFNAEEYI+LVRK+GLEIS
Sbjct: 274 RAIHVSVRRQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIRLVRKYGLEIS 333

Query: 258 QPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRC 317
           QPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWC NPHLPPCAAFVEIMAPVFSRDAWRC
Sbjct: 334 QPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCPNPHLPPCAAFVEIMAPVFSRDAWRC 393

Query: 318 VWHMIQ 323
           VWHM+Q
Sbjct: 394 VWHMLQ 399




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567576|ref|XP_003551994.1| PREDICTED: uncharacterized protein LOC100811265 [Glycine max] Back     alignment and taxonomy information
>gi|356540241|ref|XP_003538598.1| PREDICTED: uncharacterized protein LOC100778486 [Glycine max] Back     alignment and taxonomy information
>gi|356525441|ref|XP_003531333.1| PREDICTED: uncharacterized protein LOC100805311 [Glycine max] Back     alignment and taxonomy information
>gi|356512666|ref|XP_003525038.1| PREDICTED: uncharacterized protein LOC100785650 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|296081357|emb|CBI16790.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357463241|ref|XP_003601902.1| hypothetical protein MTR_3g086610 [Medicago truncatula] gi|355490950|gb|AES72153.1| hypothetical protein MTR_3g086610 [Medicago truncatula] Back     alignment and taxonomy information
>gi|255578345|ref|XP_002530039.1| conserved hypothetical protein [Ricinus communis] gi|223530455|gb|EEF32339.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|388518623|gb|AFK47373.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449450058|ref|XP_004142781.1| PREDICTED: uncharacterized protein LOC101219968 [Cucumis sativus] gi|449483793|ref|XP_004156693.1| PREDICTED: uncharacterized LOC101219968 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
TAIR|locus:2008640404 AT1G67850 "AT1G67850" [Arabido 0.947 0.759 0.647 5.9e-112
TAIR|locus:2205140382 AT1G08040 [Arabidopsis thalian 0.666 0.565 0.810 3.9e-108
TAIR|locus:2057557374 AT2G28310 "AT2G28310" [Arabido 0.666 0.577 0.805 9.2e-107
TAIR|locus:2086721398 AT3G27470 "AT3G27470" [Arabido 0.780 0.635 0.715 1.1e-103
TAIR|locus:2031905401 AT1G13000 [Arabidopsis thalian 0.947 0.765 0.566 1.4e-96
TAIR|locus:2079291396 AT3G26440 [Arabidopsis thalian 0.703 0.575 0.737 1.6e-95
TAIR|locus:504956279381 AT1G24570 [Arabidopsis thalian 0.635 0.540 0.772 1e-91
TAIR|locus:2124608 389 AT4G18530 "AT4G18530" [Arabido 0.716 0.596 0.443 7.2e-52
TAIR|locus:2008425 425 AT1G61240 [Arabidopsis thalian 0.620 0.472 0.483 1.9e-51
TAIR|locus:2202124 438 AT1G11170 [Arabidopsis thalian 0.626 0.463 0.483 4e-51
TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
 Identities = 202/312 (64%), Positives = 240/312 (76%)

Query:    14 MGTAARSSINRKTNESMRLXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXX--XXXVEYV 71
             MG  +RSSI+RK+ + M++                SF                   + Y+
Sbjct:     1 MGIFSRSSISRKSKDGMKIIATAFFGVTFGFLIGISFPSLSITKVSLPTNFLPSNDLSYI 60

Query:    72 EDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESD 131
             E++ S ++T      ++  ++ N SS+   +  D SKIWVP+NPRGAE LPP +V AESD
Sbjct:    61 EEKGSKIATPESHKAWSS-SKGNDSSSSTPI--DKSKIWVPSNPRGAEMLPPGMVAAESD 117

Query:   132 FYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWN 191
             FYLRRLWG P+EDL S+P+YL TFTVG +QK NI+A +KKFS+NFTIVLFHYDGR TEW+
Sbjct:   118 FYLRRLWGLPHEDLKSEPRYLATFTVGINQKANIDACVKKFSENFTIVLFHYDGRVTEWD 177

Query:   192 EFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRK 251
             EFEWSK AIH+SVRKQTKWWYAKRFLHPDIVA YDYIF+WDEDLGVEHFNAEEY+K+V+K
Sbjct:   178 EFEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKK 237

Query:   252 HGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFS 311
             HGLEISQPGLEPN+GLTWQMTKRRGD EVHK TEE+PGWCS+PHLPPCAAFVEIMAPVFS
Sbjct:   238 HGLEISQPGLEPNQGLTWQMTKRRGDMEVHKITEERPGWCSDPHLPPCAAFVEIMAPVFS 297

Query:   312 RDAWRCVWHMIQ 323
             R+AWRCVWH+IQ
Sbjct:   298 RNAWRCVWHVIQ 309




GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
pfam05212294 pfam05212, DUF707, Protein of unknown function (DU 1e-156
>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707) Back     alignment and domain information
 Score =  438 bits (1128), Expect = e-156
 Identities = 167/216 (77%), Positives = 193/216 (89%), Gaps = 1/216 (0%)

Query: 109 IWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAA 168
           IWVPTNPRGAERLPP IV +ESDFYLRRLWG+P ED+ S+PKYL+ FTVGY QK N++A 
Sbjct: 1   IWVPTNPRGAERLPPGIVVSESDFYLRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDAC 60

Query: 169 IKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYI 228
           +KKFSDNFTIVLFHYDGRTTEW+E EWSK+AIHVS +KQTKWW+AKRFLHPDIVA Y+YI
Sbjct: 61  VKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYI 120

Query: 229 FIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKG-LTWQMTKRRGDREVHKETEEK 287
           F+WDEDLGV++F+AEEYIK+V+KHGLEISQPGL+P++G +TW++TKRRGD EVHK+T EK
Sbjct: 121 FLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREK 180

Query: 288 PGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQ 323
              C N   PPC  FVEIMAPVFSRDAWRCVWHMIQ
Sbjct: 181 GRCCDNSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQ 216


This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 324
PF05212294 DUF707: Protein of unknown function (DUF707); Inte 100.0
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana Back     alignment and domain information
Probab=100.00  E-value=2.3e-105  Score=752.25  Aligned_cols=215  Identities=68%  Similarity=1.283  Sum_probs=211.2

Q ss_pred             eeeeCCCCCCCCCCCceeecCCcccccccCCCCCCCCCCCCceEEEEEecccccccHHHHHhhcccCcEEEEEEecCCcc
Q 020583          109 IWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTT  188 (324)
Q Consensus       109 i~~~~~p~g~e~LP~giv~~~Sd~~lr~Lwg~p~~~~~~~~kyLla~aVG~kqk~~Vd~~vkKFs~nF~vmLFHYDG~vd  188 (324)
                      ||+|++|+|+|+||+|||+++|||+||||||+|.+|...++|||||||||+|||++||++|+||++|||||||||||+||
T Consensus         1 ~~~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd   80 (294)
T PF05212_consen    1 IWVPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVD   80 (294)
T ss_pred             CCcCCCCCccccCCCCccccCCCceeeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccceEEEEEeecccceeeccccCccccccceEEEeecCccccCCCCHHHHHHHHHHhCCcccCCCccCCCC-c
Q 020583          189 EWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKG-L  267 (324)
Q Consensus       189 ~W~dleWS~~AIHvsa~kQtKWwfaKRFLHPDiVa~YDYIFLwDEDL~vd~f~~~rY~~Ivk~~gLeISQPALd~~s~-i  267 (324)
                      +|+|||||++||||+++|||||||||||||||||++|||||||||||+||||+|+|||+|||+|||||||||||++++ +
T Consensus        81 ~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~  160 (294)
T PF05212_consen   81 EWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEI  160 (294)
T ss_pred             chhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCcee
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999875 9


Q ss_pred             ceeeeeecCCceeEeeeccCCCCCCCCCCCCccceEEEeccccchhhHHhhhhhhc
Q 020583          268 TWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQ  323 (324)
Q Consensus       268 ~h~iT~R~~~~~vHr~~~~~~g~C~~~~~pPCTgFVEiMAPVFSR~AWRCvWhmIQ  323 (324)
                      ||+||+|+++++|||.+.+++++|+++++||||||||||||||||+||||||||||
T Consensus       161 ~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miq  216 (294)
T PF05212_consen  161 HHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQ  216 (294)
T ss_pred             eeeEEeecCCceeEeccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhccc
Confidence            99999999999999988888888999999999999999999999999999999999




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 48/339 (14%), Positives = 93/339 (27%), Gaps = 107/339 (31%)

Query: 31  RLIVTT-------FVGVVFGFFIGVSFPTLSLTK----------LTLPSSLLPTVEYV-- 71
           ++++TT       F+       I +   +++LT           L      LP  E +  
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-REVLTT 325

Query: 72  ---------EDQRSGLST-QRFLNV-FNPLNRNNGSSTRAQ-------------VLNDTS 107
                    E  R GL+T   + +V  + L     SS                 V   ++
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 108 KI--------WVPTNPRGAERLPPKIVR--------AES-----DFYLRRLWGNPNEDLT 146
            I        W          +  K+ +         ES       YL        E+  
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK--VKLENEY 443

Query: 147 SQPKYLVT---FTVGYDQKNNINAAIKKFSDNFTIVLFHYDG-------RTTEWNEFE-- 194
           +  + +V        +D     +  I  + D +    + + G              F   
Sbjct: 444 ALHRSIVDHYNIPKTFDS----DDLIPPYLDQY---FYSHIGHHLKNIEHPERMTLFRMV 496

Query: 195 -----WSKRAIHVSVRKQTKWWYAKRFLHPDI--VASY-DYIFIWDEDL-----GVEHF- 240
                + ++ I    R  +  W A   +   +  +  Y  YI   D         +  F 
Sbjct: 497 FLDFRFLEQKI----RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552

Query: 241 -NAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDR 278
              EE   L+     ++ +  L       ++   ++  R
Sbjct: 553 PKIEE--NLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00