Citrus Sinensis ID: 020626

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
Protein Sequence
MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccHHHHHHHHHHHccccccccccccccccccccEEEccccccccccccccccccccccccEEEEEEEEccccccccccEEHHHHHHHHHHHcHHHHHHHHHcccEEEEEEccccccccccccccccccccccHHHHHHHHHHccccEEEcccccEEEEEEEEcEEEEccccccEEEEEccccEEEcccccccccccEEEEcccccccHHHHHHHHHHHHHcEEEcccccccEEEEEcccccccccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHccccccHHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHccccccccccccccccccccEEEccccccccccccccHHHcccccccEEEEEEEcccccccccccccHHHHHHHcccccHHHHHHHHHcccEEEEEccccccccccccccHHHHHccccHHHHHHHHHHcccEEEEcccccEEEEEEcccEEEEccccccEEEEEEEEEEcccccccHccccccEEEcccccccHHHHHHHHHHHHHHccccccccccEEEEEHHHHHHcccccccccEEEEEEcc
Coil and Loop (DISEMBL)
MADHFAEIKLAeqksynsipfpwvltpnsttnlSFLTETIRTQKPFLESLLLKAGAVLLrgfdvktandfNDVVeafgyeelpyvggaaprshvvgrvftanessldrnipfhqemallpqfpsklfffcevepvsggdtplVLSHIVYERMKESYPEFVQQLEQDGLIYTRiyqekddltsptgrgwksiFLTEDKSLAEERAANLGlklewmedggvktvlgpipavtydkirqrKIWFNSIVMAYTCwkdtqndpvkavtfgngspypeDIVYNLMKILEEECVaipwqngdvlLIDNLAVLHarrsssrpRHILASLCK
Flexible Loop (DISEMBL)
MADHFAEIKLAeqksynsipfpwvLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQekddltsptgrgWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLharrsssrprhilaslck
Low Complexity Region (SEG)
MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Disordered region (IsUnstruct)
*************KSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHA****************
Disordered Region (DISOPRED)
**********AEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Disordered Region (DISEMBL)
MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Disordered Region (DISPRO)
*****AEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	323	2.2.26 [Sep-21-2011]
Q9LIG0	330	Clavaminate synthase-like	yes	no	0.987	0.966	0.643	1e-126

>sp|Q9LIG0|Y3136_ARATH Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana GN=At3g21360 PE=1 SV=1

 Score =  451 bits (1160), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 209/325 (64%), Positives = 260/325 (80%), Gaps = 6/325 (1%)

Query: 5   FAEIKLAEQKSYNSIPFPWVLTPNSTT------NLSFLTETIRTQKPFLESLLLKAGAVL 58
             E  + +QK Y S PFP V++P S +      +L   T+TI+TQK +L+SLL ++GAVL
Sbjct: 6   LVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVL 65

Query: 59  LRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMAL 118
            RGF V +A+DFNDVVEAFG++ELPYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA 
Sbjct: 66  FRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQ 125

Query: 119 LPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKD 178
           + +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E D
Sbjct: 126 VREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDD 185

Query: 179 DLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRK 238
           D +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK
Sbjct: 186 DPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRK 245

Query: 239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLL 298
           +WFNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLL
Sbjct: 246 VWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLL 305

Query: 299 IDNLAVLHARRSSSRPRHILASLCK 323
           IDN AVLH+RR    PR +LASLCK
Sbjct: 306 IDNWAVLHSRRPFDPPRRVLASLCK 330

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
255549820	322	conserved hypothetical protein [Ricinus	0.996	1.0	0.690	1e-133
224054408	327	predicted protein [Populus trichocarpa]	0.996	0.984	0.698	1e-133
225442460	325	PREDICTED: clavaminate synthase-like pro	0.996	0.990	0.680	1e-129
297743187	355	unnamed protein product [Vitis vinifera]	0.996	0.907	0.680	1e-128
297830838	330	predicted protein [Arabidopsis lyrata su	0.981	0.960	0.653	1e-125
15232542	330	clavaminate synthase-like protein [Arabi	0.987	0.966	0.643	1e-124
359806448	323	uncharacterized protein LOC100797326 [Gl	0.996	0.996	0.663	1e-124
449447823	324	PREDICTED: clavaminate synthase-like pro	0.990	0.987	0.655	1e-122
242056113	328	hypothetical protein SORBIDRAFT_03g00321	0.996	0.981	0.629	1e-118
357454785	325	Clavaminate synthase-like protein [Medic	0.990	0.984	0.626	1e-118

>gi|255549820|ref|XP_002515961.1| conserved hypothetical protein [Ricinus communis] gi|223544866|gb|EEF46381.1| conserved hypothetical protein [Ricinus communis]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/323 (69%), Positives = 274/323 (84%), Gaps = 1/323 (0%)

Query: 1   MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLR 60
           MA  F EI+++ QK +NS+ FP +L+PN +T LS LT++I++ KP+L SLL K+GA+L R
Sbjct: 1   MAKQFKEIEISHQKHFNSLLFPSILSPNPST-LSSLTDSIKSGKPYLTSLLHKSGAILFR 59

Query: 61  GFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLP 120
           GF V TA+DFNDVVEAFG++ELPY+GGAAPR++VVGRVFTANES  D+ IPFH EMA +P
Sbjct: 60  GFSVNTASDFNDVVEAFGFDELPYIGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVP 119

Query: 121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 180
           +FPSKL FFCEVEP SGG+TP+VLSHIVYE+MKE YPEFV++L++ GLIY R+  E DD 
Sbjct: 120 EFPSKLLFFCEVEPGSGGETPIVLSHIVYEKMKEKYPEFVERLDKYGLIYNRVLPEVDDP 179

Query: 181 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW 240
           +SP GRGWKS FLT DK+LAEERAA LG+KLEW+EDGGVKT++GPIPA+ YDK+R RKIW
Sbjct: 180 SSPIGRGWKSTFLTNDKTLAEERAAKLGMKLEWLEDGGVKTIMGPIPAIKYDKLRNRKIW 239

Query: 241 FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 300
           FNS+V AYT WKD +NDPVKAVTFG+G P P DI+Y+ +KILEEE +AIPWQ GD+LLID
Sbjct: 240 FNSMVAAYTGWKDMRNDPVKAVTFGDGKPLPGDIIYDCLKILEEESIAIPWQKGDILLID 299

Query: 301 NLAVLHARRSSSRPRHILASLCK 323
           N AVLHAR+S + PR +LASLCK
Sbjct: 300 NWAVLHARKSFTPPRRVLASLCK 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054408|ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|222845503|gb|EEE83050.1| predicted protein [Populus trichocarpa]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/328 (69%), Positives = 274/328 (83%), Gaps = 6/328 (1%)

Query: 1   MADHFAEIKLAEQKSYNSIP---FPWVLTPN--STTNLSFLTETIRTQKPFLESLLLKAG 55
           M+  F EI++  QK Y++IP   FP VL+PN  S++ LSF T++I  QKPFL+SLLLK G
Sbjct: 1   MSSSFKEIQIQHQKHYSNIPSFPFPSVLSPNPFSSSTLSFFTDSIIAQKPFLDSLLLKTG 60

Query: 56  AVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQE 115
           A+L RGFDV TA DFNDVVEAFG+EELPYVGGAAPR++VVGRVFTANES  D+ IPFH E
Sbjct: 61  AILFRGFDVNTAKDFNDVVEAFGFEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHE 120

Query: 116 MALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQ 175
           MA +P+FPSKLFFFCEVEP SGG+TP+VLSH+VYERMKE YP+FV+++E+ GLIYTR+  
Sbjct: 121 MAQVPEFPSKLFFFCEVEPGSGGETPIVLSHVVYERMKERYPDFVEKIEEHGLIYTRVLG 180

Query: 176 EKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIR 235
           E+DD +SP GRGWKS FLT DKS+AE+RAA LG+ LEW ED GVKT++GPIPA+ YDK R
Sbjct: 181 EEDDPSSPIGRGWKSTFLTNDKSVAEQRAAKLGMTLEWFED-GVKTIMGPIPAIKYDKSR 239

Query: 236 QRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGD 295
            RKIWFNS+V AYT WKD +NDPVKAVTFG+G P P DI+++ +KILEEE +AIPWQ GD
Sbjct: 240 NRKIWFNSMVAAYTGWKDARNDPVKAVTFGDGQPLPGDIIHDCLKILEEESLAIPWQKGD 299

Query: 296 VLLIDNLAVLHARRSSSRPRHILASLCK 323
           VLLIDN AVLHARRS + PR +LASLCK
Sbjct: 300 VLLIDNWAVLHARRSFNPPRRVLASLCK 327

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442460|ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein At3g21360 [Vitis vinifera]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/326 (68%), Positives = 264/326 (80%), Gaps = 4/326 (1%)

Query: 1   MADHFAEIKLAEQKSYNSIPFPWVLTPNS---TTNLSFLTETIRTQKPFLESLLLKAGAV 57
           M   F E  +  QK Y+  PFP VLTP     +  LS LT++I+  KP+L+SLL +AGAV
Sbjct: 1   MLQTFVESSIPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAV 60

Query: 58  LLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMA 117
           LLR F V TA+DFNDVVEAFG+ ELPYVGGAAPR+ VVGRVFT+NES  D+ IPFH EMA
Sbjct: 61  LLRDFPVTTASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMA 120

Query: 118 LLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEK 177
            +P+FPSKLFFFCEVEP +GG+TP+VLSHIVYERMK  YPEFVQ+LE+ GL+YTR+  E 
Sbjct: 121 QVPEFPSKLFFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGED 180

Query: 178 DDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQR 237
           DD +SP GRGWKS FLT+DK+ AE+RAA LG+KLEWMED GVKT++GPIPAV YD+ RQR
Sbjct: 181 DDPSSPIGRGWKSTFLTQDKTTAEKRAAQLGMKLEWMED-GVKTIMGPIPAVKYDESRQR 239

Query: 238 KIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVL 297
           KIWFNS+V AYT W+D +NDPVKAVTFG+G P P DI+Y+ +KILEEECVA+PWQ GDVL
Sbjct: 240 KIWFNSMVAAYTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVL 299

Query: 298 LIDNLAVLHARRSSSRPRHILASLCK 323
           L+DN AVLH+RR    PR +LASLCK
Sbjct: 300 LLDNWAVLHSRRPFDPPRRVLASLCK 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743187|emb|CBI36054.3| unnamed protein product [Vitis vinifera]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/326 (68%), Positives = 264/326 (80%), Gaps = 4/326 (1%)

Query: 1   MADHFAEIKLAEQKSYNSIPFPWVLTPNS---TTNLSFLTETIRTQKPFLESLLLKAGAV 57
           M   F E  +  QK Y+  PFP VLTP     +  LS LT++I+  KP+L+SLL +AGAV
Sbjct: 31  MLQTFVESSIPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAV 90

Query: 58  LLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMA 117
           LLR F V TA+DFNDVVEAFG+ ELPYVGGAAPR+ VVGRVFT+NES  D+ IPFH EMA
Sbjct: 91  LLRDFPVTTASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMA 150

Query: 118 LLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEK 177
            +P+FPSKLFFFCEVEP +GG+TP+VLSHIVYERMK  YPEFVQ+LE+ GL+YTR+  E 
Sbjct: 151 QVPEFPSKLFFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGED 210

Query: 178 DDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQR 237
           DD +SP GRGWKS FLT+DK+ AE+RAA LG+KLEWMED GVKT++GPIPAV YD+ RQR
Sbjct: 211 DDPSSPIGRGWKSTFLTQDKTTAEKRAAQLGMKLEWMED-GVKTIMGPIPAVKYDESRQR 269

Query: 238 KIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVL 297
           KIWFNS+V AYT W+D +NDPVKAVTFG+G P P DI+Y+ +KILEEECVA+PWQ GDVL
Sbjct: 270 KIWFNSMVAAYTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVL 329

Query: 298 LIDNLAVLHARRSSSRPRHILASLCK 323
           L+DN AVLH+RR    PR +LASLCK
Sbjct: 330 LLDNWAVLHSRRPFDPPRRVLASLCK 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830838|ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297329141|gb|EFH59560.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/323 (65%), Positives = 261/323 (80%), Gaps = 6/323 (1%)

Query: 7   EIKLAEQKSYNSIPFPWVLTPNS------TTNLSFLTETIRTQKPFLESLLLKAGAVLLR 60
           E ++ +QK Y S PFP V++P S        +L   T++I+ QKP+L+SLL ++G V+ R
Sbjct: 8   ETRIPQQKHYKSKPFPAVISPPSSSIPIPAVSLPLFTQSIKNQKPYLDSLLHESGTVIFR 67

Query: 61  GFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLP 120
           GF V +A DFNDVVEAFG++E PYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA +P
Sbjct: 68  GFPVNSAEDFNDVVEAFGFDEFPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVP 127

Query: 121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 180
           +FPSKLFF+CE+EP SGG+TP+VLSH+VYERMKE +PEFVQ+LE+ GL+Y R+  E DD 
Sbjct: 128 EFPSKLFFYCEIEPKSGGETPIVLSHVVYERMKEKHPEFVQRLEEHGLLYVRVLGEDDDP 187

Query: 181 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW 240
           +SP GRGWKS FLT DK+LAE+RAANLG+KLEW EDGG KTV+GPIPA+ YD+ R RK+W
Sbjct: 188 SSPIGRGWKSTFLTHDKNLAEQRAANLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVW 247

Query: 241 FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 300
           FNS+V AYT W+D +NDP KAVTFG+G P PEDIV++ ++ILEEECVA+PWQ GDVLLID
Sbjct: 248 FNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPEDIVHDCLRILEEECVAVPWQRGDVLLID 307

Query: 301 NLAVLHARRSSSRPRHILASLCK 323
           N AVLH+RR    PR +LASLCK
Sbjct: 308 NWAVLHSRRPFEPPRRVLASLCK 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232542|ref|NP_188773.1| clavaminate synthase-like protein [Arabidopsis thaliana] gi|73921104|sp|Q9LIG0.1|Y3136_ARATH RecName: Full=Clavaminate synthase-like protein At3g21360 gi|56967335|pdb|1Y0Z|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At3g21360 gi|56967336|pdb|1Y0Z|B Chain B, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At3g21360 gi|150261485|pdb|2Q4A|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of Gene Product From Arabidopsis Thaliana At3g21360 gi|150261486|pdb|2Q4A|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of Gene Product From Arabidopsis Thaliana At3g21360 gi|9294683|dbj|BAB03049.1| syringomycin biosynthesis enzyme-like protein [Arabidopsis thaliana] gi|26450615|dbj|BAC42419.1| unknown protein [Arabidopsis thaliana] gi|182623791|gb|ACB88834.1| At3g21360 [Arabidopsis thaliana] gi|332642979|gb|AEE76500.1| clavaminate synthase-like protein [Arabidopsis thaliana]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/325 (64%), Positives = 260/325 (80%), Gaps = 6/325 (1%)

Query: 5   FAEIKLAEQKSYNSIPFPWVLTPNSTT------NLSFLTETIRTQKPFLESLLLKAGAVL 58
             E  + +QK Y S PFP V++P S +      +L   T+TI+TQK +L+SLL ++GAVL
Sbjct: 6   LVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVL 65

Query: 59  LRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMAL 118
            RGF V +A+DFNDVVEAFG++ELPYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA 
Sbjct: 66  FRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQ 125

Query: 119 LPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKD 178
           + +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E D
Sbjct: 126 VREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDD 185

Query: 179 DLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRK 238
           D +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK
Sbjct: 186 DPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRK 245

Query: 239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLL 298
           +WFNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLL
Sbjct: 246 VWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLL 305

Query: 299 IDNLAVLHARRSSSRPRHILASLCK 323
           IDN AVLH+RR    PR +LASLCK
Sbjct: 306 IDNWAVLHSRRPFDPPRRVLASLCK 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806448|ref|NP_001240991.1| uncharacterized protein LOC100797326 [Glycine max] gi|255635574|gb|ACU18137.1| unknown [Glycine max]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/324 (66%), Positives = 262/324 (80%), Gaps = 2/324 (0%)

Query: 1   MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSF-LTETIRTQKPFLESLLLKAGAVLL 59
           M     EI++  QK  N +PFP V++P   T  +  LT++++TQK FLESLLL++GAVL 
Sbjct: 1   MGSSLVEIQVPGQKFVNGVPFPAVVSPPPATASAVPLTDSVKTQKAFLESLLLQSGAVLF 60

Query: 60  RGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALL 119
           RGF + TA+ FNDVVEAFGY+ELPYVGGAAPR++VVGRVFTANES  D+ IPFH EMA +
Sbjct: 61  RGFPLSTASHFNDVVEAFGYDELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQV 120

Query: 120 PQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDD 179
           PQFPSKL FFCEVEP SGG+TP+VLSH+VY+RMK+ YPEFV++LE+ GL+YTR+  E D+
Sbjct: 121 PQFPSKLLFFCEVEPRSGGETPIVLSHVVYQRMKDKYPEFVERLEKHGLLYTRVLGEDDN 180

Query: 180 LTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKI 239
             SP GRGWKS FLT DK+LA++RAA LG+KLEW+ED GVKTV+GPIP V YD+ RQRKI
Sbjct: 181 PNSPIGRGWKSTFLTTDKTLAQQRAAKLGMKLEWLED-GVKTVMGPIPGVKYDERRQRKI 239

Query: 240 WFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLI 299
           WFNS+V AYT W+D +NDPVKAVTFG+G P P  IVY+ + ILE+E VAIPWQ GD+LLI
Sbjct: 240 WFNSMVAAYTGWEDERNDPVKAVTFGDGLPLPFHIVYDCLHILEDESVAIPWQKGDILLI 299

Query: 300 DNLAVLHARRSSSRPRHILASLCK 323
           DN AVLH+RRS   PR +LASL K
Sbjct: 300 DNWAVLHSRRSFDPPRRVLASLVK 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447823|ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein At3g21360-like [Cucumis sativus]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/322 (65%), Positives = 262/322 (81%), Gaps = 2/322 (0%)

Query: 3   DHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLSFLT-ETIRTQKPFLESLLLKAGAVLLRG 61
           ++  EI++  QK Y +  FP VL+P+S +       + I+ QK  ++SL+L +GA+L RG
Sbjct: 4   ENLMEIQIPHQKHYPASYFPLVLSPSSASFAVSSFAQAIKAQKSTIDSLILNSGAILFRG 63

Query: 62  FDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQ 121
           F V+ A+DFNDVVEAFGYEE PYVGGAAPRS VVGRVFTANES  D+ IPFH E+A +P+
Sbjct: 64  FPVEAASDFNDVVEAFGYEEFPYVGGAAPRSKVVGRVFTANESPPDQKIPFHHELAQVPE 123

Query: 122 FPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLT 181
           FP+KLFF+CEVEP SGG+TP+VLSH+VYER+KE YPEFV++LE+ GLIYTR+  E DD +
Sbjct: 124 FPAKLFFYCEVEPRSGGETPIVLSHVVYERVKEKYPEFVERLEEQGLIYTRVLGEDDDPS 183

Query: 182 SPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWF 241
           SP GRGWKS FLT DKS+AEERAA LG+KLEW++D GVKTV+GPIPA+ +DK+RQRKIWF
Sbjct: 184 SPIGRGWKSTFLTHDKSIAEERAAKLGMKLEWLKD-GVKTVMGPIPAIKHDKVRQRKIWF 242

Query: 242 NSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDN 301
           NS+V AYT W+D +NDPVKAVTFG+G+P P DI+Y  ++ILEEE VAIPWQ GD+LLIDN
Sbjct: 243 NSMVAAYTGWEDARNDPVKAVTFGDGTPLPADIIYGCLRILEEESVAIPWQKGDILLIDN 302

Query: 302 LAVLHARRSSSRPRHILASLCK 323
            AVLH+RR    PR ILASLC+
Sbjct: 303 WAVLHSRRPFLPPRRILASLCR 324

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242056113|ref|XP_002457202.1| hypothetical protein SORBIDRAFT_03g003210 [Sorghum bicolor] gi|241929177|gb|EES02322.1| hypothetical protein SORBIDRAFT_03g003210 [Sorghum bicolor]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/329 (62%), Positives = 251/329 (76%), Gaps = 7/329 (2%)

Query: 1   MADHFAEIKLAEQKSYNSIPFPWVLTPNSTTNLS------FLTETIRTQKPFLESLLLKA 54
           MA  F   +L +Q+    +PFP VL P +           FL      +   LE L+  A
Sbjct: 1   MASFFEGARLPQQRVVEGVPFPAVLVPRAPAGTGAGGVDEFLAAVRSERASRLEPLVRDA 60

Query: 55  GAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQ 114
           GA+LLRGF   TA DF+  V+AFGYEELPYVGGAAPR++VVGRVFTANES  D+ IPFH 
Sbjct: 61  GALLLRGFPATTAADFDRAVDAFGYEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHH 120

Query: 115 EMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIY 174
           EMA +P FPSKLFFFCEVEP SGG+TP+VLSH VY+RMKE +PEFV++LE+DGLIYTR+ 
Sbjct: 121 EMAQVPTFPSKLFFFCEVEPKSGGETPIVLSHYVYKRMKEKFPEFVEKLEKDGLIYTRVL 180

Query: 175 QEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKI 234
            E DD +SP GRGW+S FLT+DK++AEERA  LG+KLEW +D GVKTV+GPIPAV +D+ 
Sbjct: 181 GEGDDPSSPIGRGWQSTFLTKDKAVAEERADKLGMKLEWTDD-GVKTVMGPIPAVKWDES 239

Query: 235 RQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNG 294
           R RKIWFNS+V AYT WKD +NDPVKAVTFG+GSP P D++    ++LEEECVA+PW++G
Sbjct: 240 RGRKIWFNSMVAAYTGWKDARNDPVKAVTFGDGSPLPADVIAACGQVLEEECVAVPWRHG 299

Query: 295 DVLLIDNLAVLHARRSSSRPRHILASLCK 323
           D+LLIDN AVLH+RRS   PR ILASLCK
Sbjct: 300 DILLIDNWAVLHSRRSFEPPRRILASLCK 328

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454785|ref|XP_003597673.1| Clavaminate synthase-like protein [Medicago truncatula] gi|355486721|gb|AES67924.1| Clavaminate synthase-like protein [Medicago truncatula]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/324 (62%), Positives = 260/324 (80%), Gaps = 4/324 (1%)

Query: 1   MADHFAEIKLAEQKSY-NSIPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLL 59
           + +   EI++ EQK   N  PFP ++TP  T  L+  T TI+T KP+ ESLL  +GA+LL
Sbjct: 5   LENALVEIQIPEQKLLPNGTPFPAIVTPR-TLPLN-ATHTIKTHKPYFESLLHHSGAILL 62

Query: 60  RGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALL 119
           R F ++TA+ FN +VEAF Y ELPY+GGAAPR++VVGRVFTANES  D+ IPFH EMA +
Sbjct: 63  RNFSLQTASHFNSLVEAFDYAELPYIGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQV 122

Query: 120 PQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDD 179
           P+FPSKLFFFCE+EP +GG+TP+VLSH+VY+RMK+ YPEFV++LE+ GL+Y R+  E D+
Sbjct: 123 PEFPSKLFFFCEIEPKNGGETPIVLSHVVYDRMKDRYPEFVEKLEKFGLLYVRVLGEDDN 182

Query: 180 LTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKI 239
             SP GRGWKS FLT+DK++A++RA  LG+KLEW+ED GVKT++GPIPAV YD++R+RKI
Sbjct: 183 PNSPIGRGWKSTFLTQDKNIAQQRAGELGMKLEWLED-GVKTIMGPIPAVKYDEVRKRKI 241

Query: 240 WFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLI 299
           WFNS+V AYT WKD +NDPVKAVTFG+GSP P D+VY+ + ILEEE VAIPW+ GDV+L+
Sbjct: 242 WFNSMVAAYTGWKDERNDPVKAVTFGDGSPLPADVVYDCLNILEEESVAIPWRKGDVMLL 301

Query: 300 DNLAVLHARRSSSRPRHILASLCK 323
           DN AVLH+RR    PR +LASL K
Sbjct: 302 DNWAVLHSRRPFDPPRRVLASLVK 325

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
TAIR|locus:2089423	330	AT3G21360 [Arabidopsis thalian	0.981	0.960	0.647	8.2e-115
ASPGD|ASPL0000041251	401	AN2698 [Emericella nidulans (t	0.569	0.458	0.3	3.7e-23

TAIR|locus:2089423 AT3G21360 [Arabidopsis thaliana (taxid:3702)]

 Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
 Identities = 209/323 (64%), Positives = 260/323 (80%)

Query:     7 EIKLAEQKSYNSIPFPWVLTPNSTT------NLSFLTETIRTQKPFLESLLLKAGAVLLR 60
             E  + +QK Y S PFP V++P S +      +L   T+TI+TQK +L+SLL ++GAVL R
Sbjct:     8 ETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVLFR 67

Query:    61 GFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLP 120
             GF V +A+DFNDVVEAFG++ELPYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA + 
Sbjct:    68 GFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVR 127

Query:   121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 180
             +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E DD 
Sbjct:   128 EFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDP 187

Query:   181 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW 240
             +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK+W
Sbjct:   188 SSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVW 247

Query:   241 FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 300
             FNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLLID
Sbjct:   248 FNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLID 307

Query:   301 NLAVLHARRSSSRPRHILASLCK 323
             N AVLH+RR    PR +LASLCK
Sbjct:   308 NWAVLHSRRPFDPPRRVLASLCK 330

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

ASPGD|ASPL0000041251 AN2698 [Emericella nidulans (taxid:162425)]

 Score = 206 (77.6 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
 Identities = 57/190 (30%), Positives = 87/190 (45%)

Query:    20 PFPWVLTPNS----TTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVE 75
             P P  L P+     T NL+  T     +   L SLL + G +L RG  + +A+DF+    
Sbjct:    48 PIPLALQPSGSIKPTLNLAIATVKSLQRTKILTSLLAQHGTLLFRGLPIHSASDFSAFAH 107

Query:    76 AFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPV 135
             AFGY     +G    R  +   V  ANE+  +  I  H E   +P  P  +FF+    P 
Sbjct:   108 AFGYSPHEIIGIVVDRPLLAPNVAPANEAPKEVRIYNHNESPQVPHAPEYVFFYANRAPK 167

Query:   136 SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQ-EKDDLTSPTGR-GWKSIFL 193
              GG+TP+  S  ++ R +   PEF+  L + G+  +  Y  E+  +   T R  +   F+
Sbjct:   168 KGGETPISSSLELFHRARAEIPEFIDLLVEKGVKSSVTYTVERQYVGGSTLRQAFGKEFV 227

Query:   194 TEDKSLAEER 203
              ED   A+ R
Sbjct:   228 DEDDEQAKRR 237

GO:0005575 "cellular_component" evidence=ND

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LIG0	Y3136_ARATH	1, ., -, ., -, ., -	0.6430	0.9876	0.9666	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	323
PLN00139	320	PLN00139, PLN00139, hypothetical protein; Provisio	9e-95
pfam02668	215	pfam02668, TauD, Taurine catabolism dioxygenase Ta	4e-18
COG2175	286	COG2175, TauD, Probable taurine catabolism dioxyge	3e-06
cd00250	262	cd00250, CAS_like, Clavaminic acid synthetase (CAS	0.001
cd00250	262	cd00250, CAS_like, Clavaminic acid synthetase (CAS	0.003

>gnl|CDD|165707 PLN00139, PLN00139, hypothetical protein; Provisional

 Score =  283 bits (726), Expect = 9e-95
 Identities = 137/325 (42%), Positives = 190/325 (58%), Gaps = 13/325 (4%)

Query: 3   DHFAEIKLAEQKSYNSIPFPWVLTPNSTTN--LSFLTETIRTQKPFLESLLLKAGAVLLR 60
             F   K   QK  +    P VL P          L   ++  K + E +L+K  AVLLR
Sbjct: 5   KDFKVGKCEGQKVVDGETMPLVLQPPEPNKSDTESLVSALKQNKDWFEQMLIKNSAVLLR 64

Query: 61  GFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLP 120
           GFDVK A DFND++EAFG++++ YVG  APR+HV  R++TANE  L   I +H EM L+ 
Sbjct: 65  GFDVKNAEDFNDIIEAFGWDDIRYVG-PAPRTHVYKRIWTANEGPLSEFIYYHHEMVLIK 123

Query: 121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 180
           + P K+  FCE+ P  GG TP V S  V ERM E +PE V+++E  GL YT     K+D 
Sbjct: 124 ESPKKVILFCEIPPPEGGQTPFVPSFRVTERMLEEFPEAVEEVEAKGLKYTFTALSKNDT 183

Query: 181 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVT--YDKIRQRK 238
           +S  GRGW+  F T DK+ AE RA  LG+ +EW+ +GGVKT+LGP  ++T  +D  + R+
Sbjct: 184 SSMRGRGWEDAFGTSDKAEAERRAKALGMDMEWLPNGGVKTILGP-RSLTKVFDGRKGRR 242

Query: 239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLL 298
           +WFN++V               +    +G+  PE+ V    +I+EEE +   W+ GDVL 
Sbjct: 243 MWFNTVV-------GMHGKESSSAMLADGTEIPENFVKRCGQIIEEESIQFKWEKGDVLF 295

Query: 299 IDNLAVLHARRSSSRPRHILASLCK 323
           +DNLA+LH RR S  PR +L + CK
Sbjct: 296 LDNLALLHGRRPSLPPRKVLVATCK 320

Length = 320

>gnl|CDD|217174 pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 50/298 (16%), Positives = 83/298 (27%), Gaps = 94/298 (31%)

Query: 25  LTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPY 84
           LTP     ++ +     T     +  L + G +L RG  + +   F  +   F       
Sbjct: 5   LTPAIGAEITGVDLDFATLAELRD-ALAEHGVLLFRGQPL-SPEAFLALARRF------- 55

Query: 85  VGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVL 144
                                      +H +++ L + P      C   P  GG+T    
Sbjct: 56  ---------------------------WHTDLSYLEEPPGIQLLHCLEVPAEGGETLFAD 88

Query: 145 SHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERA 204
               Y  +    PE  ++L  +GL     Y +                   D  L     
Sbjct: 89  GRAAYNALS---PELKERL-AEGLRAVHSYPDGHY----------------DAGLRPPSR 128

Query: 205 ANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTF 264
                                 P V    +  RK+ FN+               +  +  
Sbjct: 129 H---------------------PVVRTHPVTGRKVLFNNPHFTT---------RIVGLPL 158

Query: 265 GNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRS--SSRPRHIL 318
                    ++  L   L   E      WQ GD+++ DN  VLH R +   +  RH+L
Sbjct: 159 AESQA----LLDALDAHLTDPEFTYRHKWQPGDLVIWDNRRVLHGRTAFDPTGRRHLL 212

This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli is a alpha-ketoglutarate-dependent taurine dioxygenase. This enzyme catalyzes the oxygenolytic release of sulfite from taurine. TfdA from Burkholderia sp. is a 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. TfdA from Alcaligenes eutrophus JMP134 is a 2,4-dichlorophenoxyacetate monooxygenase. Also included are gamma-Butyrobetaine hydroxylase enzymes EC:1.14.11.1. Length = 215

>gnl|CDD|225086 COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 64/286 (22%)

Query: 47  LESLLLKAGAVLLRGFDVKTANDFNDVVEAFG----YEELPYVGGAAPRSHVVGRVFTAN 102
           +   +L+   V  R        +   +   FG    +          P   V      A 
Sbjct: 35  IRRAVLEHKVVFFRDQAHLDDAEQLALARRFGELHIHPTPAVHLEGHPEILVYD---NAE 91

Query: 103 ESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQ 162
            + +  N  +H ++  L   P+         P +GGDT    +   YE + E   E ++ 
Sbjct: 92  GNGMPDNAVWHTDVTFLETPPAGSILQAVELPSTGGDTLFADTAAAYETLPEPLRELLRG 151

Query: 163 LEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTV 222
           L      ++   +                F  E  S  E   A              + +
Sbjct: 152 L---PAHHSNEER----------------FPRERPSKTERPHAR------------FREI 180

Query: 223 LGPIPAVTYDKIR------QRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVY 276
           +   P   +  +R      ++ ++ N          +     +  +      P   + + 
Sbjct: 181 VRKNPPTEHPVVRTHPETGEKALFVN----------EGFTTRIVGL-----PPKESEALL 225

Query: 277 -NLMKILE--EECVAIPWQNGDVLLIDNLAVLHARR--SSSRPRHI 317
             L   L   E      WQ GD+++ DN A LHA     + + R +
Sbjct: 226 AELQAHLTDPENQYRHRWQPGDIVIWDNRATLHAATAFYADQRRIL 271

Length = 286

>gnl|CDD|238154 cd00250, CAS_like, Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 283 EEECVAIPWQNGDVLLIDNLAVLHARRSSS----RPRHIL 318
            +  + +  + GD+L+ DN  VLH R + S      R + 
Sbjct: 216 PDNQLTVKLEPGDLLIFDNRRVLHGRTAFSPRYGGDRWLK 255

In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2. Length = 262

>gnl|CDD|238154 cd00250, CAS_like, Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 91  RSHVVGRVFT-------ANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLV 143
           R  + G V          N +  +  +P H ++A     P      C     +GG T LV
Sbjct: 70  RGTLYGDVVPVPGKENAQNGAYTNTLLPLHTDLAYHEYRPGLQILHCLRNTATGGATLLV 129

Query: 144 LSHIVYERMKESYPEF 159
               V  ++    PE 
Sbjct: 130 DGFRVALKLLREDPEA 145

In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2. Length = 262

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	323
PLN00139	320	hypothetical protein; Provisional	100.0
PRK09553	277	tauD taurine dioxygenase; Reviewed	100.0
TIGR02409	366	carnitine_bodg gamma-butyrobetaine hydroxylase. Me	100.0
TIGR02410	362	carnitine_TMLD trimethyllysine dioxygenase. Member	100.0
PF02668	258	TauD: Taurine catabolism dioxygenase TauD, TfdA fa	100.0
COG2175	286	TauD Probable taurine catabolism dioxygenase [Seco	100.0
cd00250	262	CAS_like Clavaminic acid synthetase (CAS) -like; C	100.0
KOG3888	407	consensus Gamma-butyrobetaine,2-oxoglutarate dioxy	99.93
KOG3889	371	consensus Predicted gamma-butyrobetaine,2-oxogluta	99.91
PRK02963	316	carbon starvation induced protein; Validated	99.87
PF08943	297	CsiD: CsiD; InterPro: IPR015038 This group of prot	98.31

>PLN00139 hypothetical protein; Provisional

Probab=100.00  E-value=9.4e-66  Score=469.12  Aligned_cols=313  Identities=43%  Similarity=0.764  Sum_probs=278.7

Q ss_pred             cccccccccccccCCCCCCceEEecCCC--CChhhHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCC
Q 020626            3 DHFAEIKLAEQKSYNSIPFPWVLTPNST--TNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYE   80 (323)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~   80 (323)
                      .+|+..++++++++++.++|++|+|..+  .+..+|.+|..+.+++|+++|.+||+|+||||++.+.++|.+|+++||..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~p~vi~~~~~~~~~~~~l~~~~~~~~~~l~~~L~~hGavlfRG~~i~~~~~f~~~a~~fg~~   84 (320)
T PLN00139          5 KDFKVGKCEGQKVVDGETMPLVLQPPEPNKSDTESLVSALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDFNDIIEAFGWD   84 (320)
T ss_pred             cceeeccccCcccCCCCCCCeEEecCcccccchhhHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHhCcc
Confidence            3578889999999999999999999864  24446899999999999999999999999999997789999999999997


Q ss_pred             CCCCccCCCCceeecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHH
Q 020626           81 ELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFV  160 (323)
Q Consensus        81 ~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~  160 (323)
                      .++|.+ ..+|..+.+.|+++++.|....+.||+|++|.+.||.+++|||+++|+.||+|.|||+++||+.|++..|+++
T Consensus        85 ~~~y~~-~~~r~~v~~~v~t~te~P~~~~i~~H~E~sy~~~pP~~~~f~C~~~p~~GGeT~~aD~~~v~~~L~~~~p~~~  163 (320)
T PLN00139         85 DIRYVG-PAPRTHVYKRIWTANEGPLSEFIYYHHEMVLIKESPKKVILFCEIPPPEGGQTPFVPSFRVTERMLEEFPEAV  163 (320)
T ss_pred             ccccCC-CCCcccccccEecCCCCCccccccccccccCccCCCceEEEEecccCCCCCCCeeecHHHHHHHhhhhCHHHH
Confidence            777877 4677777788999888888888999999999999999999999999999999999999999999998889999


Q ss_pred             HHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEec-CCCCcee
Q 020626          161 QQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYD-KIRQRKI  239 (323)
Q Consensus       161 ~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~h-P~TG~~~  239 (323)
                      +.|+++|+.|.|+++...+..++.+.+|+.+|+|+|++++|++|+..|+.++|.+||.+.+.....|+++.| |.||+++
T Consensus       164 e~l~~~gv~y~r~~~~~~~~~~~~~~sWq~~F~t~d~~eve~~~~~~g~~~eW~~dg~l~~~~~~~~~~~~~~~~tg~~~  243 (320)
T PLN00139        164 EEVEAKGLKYTFTALSKNDTSSMRGRGWEDAFGTSDKAEAERRAKALGMDMEWLPNGGVKTILGPRSLTKVFDGRKGRRM  243 (320)
T ss_pred             HHHHhcCceEEEeccccccccccccchHHHHhCCCCHHHHHHHHHHcCCeEEEcCCCcEEEEEeeccceeccCCCCCCEE
Confidence            999999999999876543333456789999999999999999999999999999999733333556777775 5999999


Q ss_pred             eeeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCCCceeee
Q 020626          240 WFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILA  319 (323)
Q Consensus       240 lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g~Rr~l~  319 (323)
                      |||+++.+|..       .+..++||||++|+++.+++|.+++++.++.+.||+|||+++||.+++|||.+|+|+||+++
T Consensus       244 wFN~~~~~h~~-------~~~~~~fGDGs~i~~~~l~~i~~~~~~~~~~~~Wq~GDvl~iDN~~~~HGR~pf~g~Rrvlv  316 (320)
T PLN00139        244 WFNTVVGMHGK-------ESSSAMLADGTEIPENFVKRCGQIIEEESIQFKWEKGDVLFLDNLALLHGRRPSLPPRKVLV  316 (320)
T ss_pred             Eeechhhhhcc-------CCCCceecCCCcCCHHHHHHHHHHHHHhhccCCCCCCCEEEEeChhhhcCCCCCCCCceEEE
Confidence            99998877742       23457899999999999999999999999999999999999999999999999999999999


Q ss_pred             cccC
Q 020626          320 SLCK  323 (323)
Q Consensus       320 ~~~~  323 (323)
                      +|++
T Consensus       317 ~m~~  320 (320)
T PLN00139        317 ATCK  320 (320)
T ss_pred             EecC
Confidence            9985

>PRK09553 tauD taurine dioxygenase; Reviewed

Probab=100.00  E-value=6.6e-42  Score=309.01  Aligned_cols=242  Identities=20%  Similarity=0.219  Sum_probs=166.8

Q ss_pred             hhHHHH-HHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCcee---ecCCCCCCCC
Q 020626           34 SFLTET-IRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVF---TANESSLDRN  109 (323)
Q Consensus        34 ~~l~~~-~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~---~~~~~~~~~~  109 (323)
                      .+|.++ .++.+++|+++|.+||+++||||++ +++++.+|+++||.+...+..+..++.   ..|+   +++..+.+..
T Consensus        19 ~dl~~~l~~~~~~~l~~~l~~~Gvlvfr~q~l-~~~~~~~~~~~~G~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~   94 (277)
T PRK09553         19 IDLTRPLSDNQFEQLYHALLRHQVLFFRDQPI-TPQQQRDLAARFGDLHIHPVYPHAEGV---PEIIVLDTHNDNPPDND   94 (277)
T ss_pred             cccCCcCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCCccCCCCCCCCCC---CeEEEEeccCCCCCCCC
Confidence            356555 4667999999999999999999999 799999999999986522222122221   1122   2222222222


Q ss_pred             ccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcc
Q 020626          110 IPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWK  189 (323)
Q Consensus       110 ~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~  189 (323)
                       .||+|++|.+.||.+++|||++.|+.||+|.|||+++||+.|+   ++++++|+++.+.|.  +...          +.
T Consensus        95 -~wHtD~sy~~~pp~~~~L~~~~~p~~GG~T~fad~~~ay~~L~---~~~~~~l~~l~~~h~--~~~~----------~~  158 (277)
T PRK09553         95 -NWHTDVTFIETPPLGAILAAKQLPSTGGDTLWASGIAAYEALS---APFRQLLSGLTAEHD--FRKS----------FP  158 (277)
T ss_pred             -CCeecccCeeCCCceeEEEEEecCCCCCccHhhhHHHHHHhCC---HHHHHHhcCcEEEEc--chhh----------cc
Confidence             6999999999999999999999999999999999999999999   899999997665552  2110          00


Q ss_pred             -cccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeec-cchhccccccCCCCCCcceecCCC
Q 020626          190 -SIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNS-IVMAYTCWKDTQNDPVKAVTFGNG  267 (323)
Q Consensus       190 -~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~-~~~~~~~~~~~~~~~~~~~~~~dg  267 (323)
                       ..+......           ...+.+... ..+...||+|++||+||++++|.+ .....+.++              .
T Consensus       159 ~~~~~~~~~~-----------~~~~~~~~~-~~~~~~hPlVr~hp~tG~k~L~~n~~~~~~i~gl--------------~  212 (277)
T PRK09553        159 EYKYRKTEEE-----------HQRWEEAVA-KNPPLLHPVVRTHPVSGRQALFVNEGFTTRIVDL--------------S  212 (277)
T ss_pred             cccccccccc-----------ccccccccc-cCCCCCCCeEEeCCCCCceeEEeccccccEeCCC--------------C
Confidence             000000000           000000000 112356999999999999998744 344444322              2


Q ss_pred             CCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCC-CCCceeeecc
Q 020626          268 SPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSS-SRPRHILASL  321 (323)
Q Consensus       268 ~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f-~g~Rr~l~~~  321 (323)
                      .+.++++++.|.+.+  ++++|+|+|++||+|||||++++|+++++ .+.+|++.+.
T Consensus       213 ~~es~~ll~~L~~~~~~p~~~~~~~w~~GD~viwDNr~~~H~a~~~~~~~~R~~~R~  269 (277)
T PRK09553        213 EKESEALLGFLFAHITKPEFQVRWRWQPNDVAIWDNRVTQHYANADYLPQRRIMHRA  269 (277)
T ss_pred             HHHHHHHHHHHHHHhcCcCeEEEEecCCCCEEEEcCcceeEecccCCCCCceEEEEE
Confidence            234567777776654  67999999999999999999999999865 4566777654

>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase

Probab=100.00  E-value=4.9e-35  Score=274.27  Aligned_cols=225  Identities=19%  Similarity=0.234  Sum_probs=160.0

Q ss_pred             hHHHHH--HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccC-CCCceeecCceeecCCCCCCCCcc
Q 020626           35 FLTETI--RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGG-AAPRSHVVGRVFTANESSLDRNIP  111 (323)
Q Consensus        35 ~l~~~~--~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~-~~~r~~~~~~v~~~~~~~~~~~~~  111 (323)
                      ++.+.+  ++....+.++|.+||+++|||+++ +++++.+|+++||++.....|. ..++....    ..+..++...++
T Consensus       114 d~~~~~~~~~~~~~~~~~l~~~G~v~~rg~~~-~~~~~~~~~~~~G~~~~~~~g~~~~v~~~~~----~~~~~yt~~~l~  188 (366)
T TIGR02409       114 DHEAVMKDDSVLLDWLSAVRDVGIAVLKGAPT-KPGAVEKLGKRIGFIRETNYGLLFEVRLKAD----ANNLAYTNGGLP  188 (366)
T ss_pred             eHHHHhCCHHHHHHHHHHHHhccEEEEeCCCC-CHHHHHHHHHHhccccccCCCCeEEEEecCC----cccccccccccc
Confidence            344444  234667788999999999999998 8999999999999875433332 12222111    111223346789


Q ss_pred             ccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccc
Q 020626          112 FHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSI  191 (323)
Q Consensus       112 ~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~  191 (323)
                      ||||++|.+.||++++|+|+++|..||+|.|+|+.+||+.|+++.|+.++.|....+.|... ..               
T Consensus       189 ~HtD~~y~~~pP~~~~L~c~~~~~~GG~T~~~d~~~~~~~L~~~~p~~~~~L~~~~~~~~~~-~~---------------  252 (366)
T TIGR02409       189 FHTDNPYRDHPPGLQLLHCLESTVEGGDSLFVDGFAVAEALRVENPEAFRILTSTPVEFREE-GD---------------  252 (366)
T ss_pred             ccccCCccCCCCceeeeeecccCCCCcceeeeeHHHHHHHHhHhCHHHHHHHhcCccceEEc-CC---------------
Confidence            99999999999999999999999999999999999999999999999999999755444321 00               


Q ss_pred             cccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCc--eeeeeccchhccccccCCCCCCcceecCCCCC
Q 020626          192 FLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQR--KIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSP  269 (323)
Q Consensus       192 f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~--~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~  269 (323)
                                              +.  ......||+|..||. |+  .+.|++.....+.+++              ..
T Consensus       253 ------------------------~~--~~~~~~~Pvi~~~~~-g~~~~~~~~~~~~~~~~~~~--------------~~  291 (366)
T TIGR02409       253 ------------------------DV--HDLRARHPVIELDDD-GEVVKIRFNNASRDWFFDVP--------------PS  291 (366)
T ss_pred             ------------------------Cc--eeeEeccCEEEECCC-CCEEEEEeCCcccCccCCCC--------------HH
Confidence                                    00  112357999999995 76  5566653221111110              01


Q ss_pred             CCH---HHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC---CCceeeecc
Q 020626          270 YPE---DIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS---RPRHILASL  321 (323)
Q Consensus       270 ~~~---~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~---g~Rr~l~~~  321 (323)
                      ..+   ++++.|.+.+  ++++++|+|+|||+|||||+++||||++|+   |.|.+.++.
T Consensus       292 ~~~~~~~al~~l~~~~~~p~~~~~~~l~pGd~vi~DN~rvlH~R~af~~~~~~R~L~g~Y  351 (366)
T TIGR02409       292 RVQDFYAAYRRFTELIEQPRFKFTFKLEPGDLVLFDNTRLLHARDAFSNPEGKRHLQGCY  351 (366)
T ss_pred             HHHHHHHHHHHHHHHHcCcccEEEEEcCCCcEEEEeceEEeecCCCcCCCCCceEEEEEE
Confidence            112   3344555543  478999999999999999999999999996   577776653

Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.

>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase

Probab=100.00  E-value=7.4e-35  Score=272.20  Aligned_cols=228  Identities=18%  Similarity=0.184  Sum_probs=161.6

Q ss_pred             hhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCC-CceeecCceeecCCCCCCCCccccCCCCCCC
Q 020626           42 TQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAA-PRSHVVGRVFTANESSLDRNIPFHQEMALLP  120 (323)
Q Consensus        42 ~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~-~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~  120 (323)
                      +....+.++|.+||+++|||+++ +++++++|+++||++...+.|... ......    ..+...++..++||||++|.+
T Consensus       115 ~~l~~~l~~l~~~G~v~~~g~~~-~~~~~~~~a~riG~~r~t~~g~~~~v~~~~~----~~~~ayt~~~l~~HtD~~y~~  189 (362)
T TIGR02410       115 STLKSFSKNIYKYGFTFVDNVPV-TPEATEKLCERISIIRPTHYGGFWDFTSDLS----KNDTAYTSLAIDMHTDGTYWD  189 (362)
T ss_pred             HHHHHHHHHHHhhCEEEEcCCCC-CHHHHHHHHHHhccceecCCCCeEEEEecCC----CcccccccCCccccccCCCCC
Confidence            34667788999999999999998 899999999999997544444211 111100    111223345789999999999


Q ss_pred             CCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHH
Q 020626          121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLA  200 (323)
Q Consensus       121 ~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~  200 (323)
                      .||++++|+|+++|..||+|+|+|+.+||+.|+++.|+.++.|.+..+.|......                        
T Consensus       190 ~pp~~~~L~c~~~~~~GG~t~~~d~~~~~~~L~~~~pe~~~~L~~~~~~~~~~~~~------------------------  245 (362)
T TIGR02410       190 ETPGLQLFHCLTHDGTGGETVLVDGFYCAEQLRKEAPEDFELLTKVPIPHHYSGES------------------------  245 (362)
T ss_pred             CCCcceeEeeeecCCCCCceeeeeHHHHHHHHhhhChHHHHHHhcCccceEEccCc------------------------
Confidence            99999999999999999999999999999999999999999999766555321000                        


Q ss_pred             HHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCC--CCHHHHHHH
Q 020626          201 EERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSP--YPEDIVYNL  278 (323)
Q Consensus       201 ~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~--~~~~~l~~l  278 (323)
                                     +.........||+|+.||.+|+...++........ ++       .+.++....  ...+++..|
T Consensus       246 ---------------~~~~~~~~~~~Pvi~~~p~~G~~~~ir~~~~~r~~-~~-------~~~~~~~~~~~~~~~Al~~l  302 (362)
T TIGR02410       246 ---------------DSVFIHPDYPQPVLTLDPSTGELTQIRWNNSDRAV-MD-------CLNWSSPYDVPKFYKAIRRF  302 (362)
T ss_pred             ---------------CceeeeeccCCCEEEecCCCCcEEEEEcCCCcccc-cc-------cCCCCCHHHHHHHHHHHHHH
Confidence                           00001223468999999999997654321111100 00       000000000  012566666


Q ss_pred             HHHH--HHhcccccccCCCEEEEecccccccCCCCCCCceeeecc
Q 020626          279 MKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASL  321 (323)
Q Consensus       279 ~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g~Rr~l~~~  321 (323)
                      .+.+  ++++++|+|+|||+|||||+++||||++|+|.|++.++.
T Consensus       303 ~~~~~~p~~~~~~~l~pGd~vi~DN~rvLHgRtaf~g~R~L~G~Y  347 (362)
T TIGR02410       303 NKIITDPDNEIEFKLRPGTVLIFDNWRVLHSRTSFTGYRRMCGCY  347 (362)
T ss_pred             HHHhcChhcEEEEEcCCccEEEEeeEEEeecCCCcCCceEEEEEE
Confidence            6655  469999999999999999999999999999998887764

Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.

>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases

Probab=100.00  E-value=9.5e-35  Score=259.88  Aligned_cols=225  Identities=24%  Similarity=0.365  Sum_probs=159.2

Q ss_pred             HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC----CCccCC-CCceeecCceeecCCCC--CCCCcccc
Q 020626           41 RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL----PYVGGA-APRSHVVGRVFTANESS--LDRNIPFH  113 (323)
Q Consensus        41 ~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~----~~~g~~-~~r~~~~~~v~~~~~~~--~~~~~~~H  113 (323)
                      ++..++|+++|.++|+|+|||+++ +.+++.+|++.||.+..    ...|.. ..+.... .++.....+  +...++||
T Consensus        23 ~~~~~~~~~~l~~~G~vvlrg~~~-~~~~~~~~~~~~G~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~~~~~~l~~H  100 (258)
T PF02668_consen   23 DEELEELREALAEYGFVVLRGFPL-DPEQFEALASRLGPLMSHPRSTFYGDIWDVRSVIP-EVEDSSYTPSSSNGELPWH  100 (258)
T ss_dssp             HCHHHHHHHHHHHHSEEEEESCTS-SHHHHHHHHHHHSEBEEESSSSECCSCEEEEEECT-TEETTTTSTTT-SSGEEEE
T ss_pred             HHHHHHHHHHHhcccEEEEcCCCC-CHHHHHHHHHhhCcccccccccccccccccccccc-cccccccCChhhhcccccc
Confidence            357888999999999999999998 89999999999996521    111210 0111111 222222222  24579999


Q ss_pred             CCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccc
Q 020626          114 QEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFL  193 (323)
Q Consensus       114 tD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~  193 (323)
                      ||++|.+.||++++|+|+++|..||+|.|+|+.++|+.|+   |++++.|+ .++.|.+.....         ..     
T Consensus       101 tD~~~~~~~p~~~~L~c~~~~~~GG~T~~~d~~~~~~~L~---pe~~~~L~-~~~~~~~~~~~~---------~~-----  162 (258)
T PF02668_consen  101 TDGSYWPYPPDYLALYCLRPAEEGGETTFADARAVYERLS---PELLERLQ-EPVRYIRRFPSS---------RY-----  162 (258)
T ss_dssp             -TTTTSTTEESEEEEEEEEEESSSSEEEEEEHHHHHHCSH---HHHHHHHC-TTEEEEEECGGS---------SG-----
T ss_pred             cccCcccCCcceeEEEeeccCCCCCccccccHHHHHhhCC---HHHHhhhh-ceeeEeeccccc---------cc-----
Confidence            9999999999999999999999999999999999999999   99999998 488887654321         00     


Q ss_pred             cCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCCCCHH
Q 020626          194 TEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPED  273 (323)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~  273 (323)
                       .                    .   ......+|+|..||.||++++|++.......++             ...+...+
T Consensus       163 -~--------------------~---~~~~~~~Piv~~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~  205 (258)
T PF02668_consen  163 -E--------------------E---LRPSQSHPIVRTHPETGRKILYSSPFASRFQGP-------------PDLEESQE  205 (258)
T ss_dssp             -S--------------------C---CSEEEEEESEEEETTTTCEEECESTTEEEETTS-------------CEHHHHHH
T ss_pred             -c--------------------c---cCCceEeeEEEEcCcccceeEecccceeeecCc-------------CChHHHHH
Confidence             0                    0   123567999999999999999877611111000             00112345


Q ss_pred             HHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCC--CCCceeeeccc
Q 020626          274 IVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSS--SRPRHILASLC  322 (323)
Q Consensus       274 ~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f--~g~Rr~l~~~~  322 (323)
                      +++.|.+.+  .++++.|+|++||++||||+++||||++|  .+.+|+|.++|
T Consensus       206 ~~~~l~~~l~~~~~~~~~~~~~GDlli~dN~~~lHgR~~~~~~~~~R~L~R~~  258 (258)
T PF02668_consen  206 ALAALDALLKDPEYTYRHRWQPGDLLIWDNHRVLHGRTAFDDPDGDRHLLRVW  258 (258)
T ss_dssp             HHHHHHHHHTSGGGEEEEE--TTEEEEEETTTEEEEE--E-STTSSEEEEEEE
T ss_pred             HHHHHHHHHhChhhcccccCCCceEEEEcCCeeEecCCCCCCCCCCEEEEEeC
Confidence            667777655  58999999999999999999999999999  34566666554

The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....

>COG2175 TauD Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=8.5e-34  Score=252.71  Aligned_cols=252  Identities=18%  Similarity=0.178  Sum_probs=170.2

Q ss_pred             CCCceEEecCCCCChhhHHHHHHhhHHHHHHHHhhccEEEEecC-CCCChhHHHHHHHHhCCCCCCCccC----CCCcee
Q 020626           19 IPFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGF-DVKTANDFNDVVEAFGYEELPYVGG----AAPRSH   93 (323)
Q Consensus        19 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~-~~~~~e~~~~~~~~~G~~~~~~~g~----~~~r~~   93 (323)
                      +.+.+.|++.....  +|.   +...++|++++.++|+|+||+| .+ +++++.+++.+||.....+...    ..+...
T Consensus        12 ~~~Ga~i~~l~~~~--~l~---~~~~~~i~~~~~~~~vv~fR~q~~~-d~a~q~~~~~~fG~~~~~~~~~~~~~~~~ei~   85 (286)
T COG2175          12 PRLGAEIEGLDLPA--PLS---DATVDAIRRAVLEHKVVFFRDQAHL-DDAEQLALARRFGELHIHPTPAVHLEGHPEIL   85 (286)
T ss_pred             CccceEEeccCCCC--ccC---hhhHHHHHHHHHHcCEEEEcCCCCC-ChHHHHhhhhhceeeEeeccCcccccCCCcee
Confidence            45777887776431  222   2368999999999999999999 77 7888888999999763211110    111111


Q ss_pred             ecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEE-
Q 020626           94 VVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTR-  172 (323)
Q Consensus        94 ~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~-  172 (323)
                      ...+. ..+..| +. ..||+|.+|.+.||.+.+|+|++.|..||+|+|+|+.+||+.|++   .+++.+.+....|.. 
T Consensus        86 ~~~~~-~~~~~p-~~-~~wH~D~~f~~~~p~~~~l~~v~~P~~gg~T~f~d~~~A~~~L~~---~~r~~~~gl~~~h~~~  159 (286)
T COG2175          86 VYDNA-EGNGMP-DN-AVWHTDVTFLETPPAGSILQAVELPSTGGDTLFADTAAAYETLPE---PLRELLRGLPAHHSNE  159 (286)
T ss_pred             Eeccc-ccCCCC-cc-ccCcccceeecCCCceeEEEEeecCCCCCCceeechHHHHHhccH---HHHHHHhcchhccccc
Confidence            11110 011122 33 679999999999999999999999999999999999999999995   568888865554431 


Q ss_pred             -EecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeec-cchhccc
Q 020626          173 -IYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNS-IVMAYTC  250 (323)
Q Consensus       173 -~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~-~~~~~~~  250 (323)
                       .+...     ....++...      ..+.+        +.+      ..+...||+|++||+||++++|.+ .....+.
T Consensus       160 ~~~~~~-----~~~~~~~p~------~~~~~--------~~~------~~~~~~~Pvvr~hP~~g~~~l~~n~~~~~~i~  214 (286)
T COG2175         160 ERFPRE-----RPSKTERPH------ARFRE--------IVR------KNPPTEHPVVRTHPETGEKALFVNEGFTTRIV  214 (286)
T ss_pred             cccccc-----ccCcCcCcc------chhhh--------hhc------cCCcccCceEEeCCCcCceeeeecCCcceecc
Confidence             11110     001111110      00000        000      234568999999999999998744 3555543


Q ss_pred             cccCCCCCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeecc
Q 020626          251 WKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILASL  321 (323)
Q Consensus       251 ~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~~  321 (323)
                      +.+              ...++++++.|.+..  ++++|+++||+||||||||+++||+|++|.+ .||++.+.
T Consensus       215 g~~--------------~~~~~~ll~~L~~~~~~pe~~~r~~wq~gDivIwDNr~~lH~a~~~~~~~~R~l~R~  274 (286)
T COG2175         215 GLP--------------PKESEALLAELQAHLTDPENQYRHRWQPGDIVIWDNRATLHAATAFYADQRRILHRC  274 (286)
T ss_pred             CCC--------------HHHHHHHHHHHHHhhcChhhEEEEecCCCCEEEEeCcceeeccccCCccceEEEEEe
Confidence            322              223457888887764  6899999999999999999999999999875 47766543

>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases

Probab=100.00  E-value=2.8e-32  Score=244.90  Aligned_cols=220  Identities=18%  Similarity=0.203  Sum_probs=158.1

Q ss_pred             hHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCCCCCCCCccccCCCCCCCCC
Q 020626           43 QKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQF  122 (323)
Q Consensus        43 ~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~p  122 (323)
                      ...++..++.++|+++|+|++. +.+++.+++.+||.....+.+...+-.... +  ..+...++..++||||++|.+.|
T Consensus        33 ~~~~~l~~~~~~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~-~--~~~~~~t~~~l~~HtD~~y~~~p  108 (262)
T cd00250          33 PLGKLLLASAGVGFAELEGAPL-DPAALLGLAERIGFIRGTLYGDVVPVPGKE-N--AQNGAYTNTLLPLHTDLAYHEYR  108 (262)
T ss_pred             HHHHHHHHHHHhcEEEEeCCCC-CHHHHHHHHHHhcccccccCCCeEEeccCC-C--ccccccccCCcCccccCCCCCCC
Confidence            4666778999999999999998 899999999999976544444221111000 0  11223456788999999999999


Q ss_pred             CcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHHHH
Q 020626          123 PSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEE  202 (323)
Q Consensus       123 P~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~  202 (323)
                      |++++|+|+++|..||+|.|+|+.++|+.|.++.|++++.|++..+.|.......                         
T Consensus       109 p~~~~L~cl~~~~~GG~T~~vd~~~~~~~L~~~~pe~~~~L~~~~~~~~~~~~~~-------------------------  163 (262)
T cd00250         109 PGLQILHCLRNTATGGATLLVDGFRVALKLLREDPEAFELLSRVPVRHAYPGSSG-------------------------  163 (262)
T ss_pred             CceEEEEEeccCCCCCcceeeeHHHHHHHHHhhCHHHHHHHhCCCeeEEEcCCCc-------------------------
Confidence            9999999999999999999999999999998777999999998777775321100                         


Q ss_pred             HHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHHHH
Q 020626          203 RAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKI  281 (323)
Q Consensus       203 ~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~  281 (323)
                                    .. ......||+|..||  |.+++ |+......         .+    . ++.+...++++.|.+.
T Consensus       164 --------------~~-~~~~~~~Pii~~~~--~~~~~r~~~~~~~~---------~p----~-~~~~~~~~al~~l~~~  212 (262)
T cd00250         164 --------------TM-FSSYQLAPVLELDP--EDPVLRYNNYDNFS---------VP----F-DEVKEAYEALAELVAL  212 (262)
T ss_pred             --------------cc-eeeecccCEEEeCC--CccEEEEeCCCCCC---------CC----H-HHHHHHHHHHHHHHHH
Confidence                          00 12345699999999  55544 33221000         00    0 0001234667777776


Q ss_pred             HH--HhcccccccCCCEEEEecccccccCCCCCC---Cceeeeccc
Q 020626          282 LE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR---PRHILASLC  322 (323)
Q Consensus       282 ~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g---~Rr~l~~~~  322 (323)
                      +.  +++++|+|++||+|||||+++||||++|++   .+|+|.+++
T Consensus       213 ~~~~~~~~~~~l~~Gdivi~DN~r~lHgR~~f~~~~~~~R~L~r~~  258 (262)
T cd00250         213 IEDPDNQLTVKLEPGDLLIFDNRRVLHGRTAFSPRYGGDRWLKGCY  258 (262)
T ss_pred             HcChhhEEEEEcCCCCEEEEechhhhcCCCCCCCCCCCceEEEEEE
Confidence            54  489999999999999999999999999975   456665543

In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2

>KOG3888 consensus Gamma-butyrobetaine,2-oxoglutarate dioxygenase [Lipid transport and metabolism]

Probab=99.93  E-value=5.5e-25  Score=195.18  Aligned_cols=224  Identities=21%  Similarity=0.254  Sum_probs=147.8

Q ss_pred             hHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccC-CCCceeecCceeecCCCCCCCCccccCCCCCCCC
Q 020626           43 QKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGG-AAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQ  121 (323)
Q Consensus        43 ~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~-~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~  121 (323)
                      ..++|. +|..+|+++++|-|. +.....++++++|++..+..|. ..++.+..    ++|-++....+++|||+.|...
T Consensus       153 l~qwLq-aL~~~GiA~lkGAP~-~~~~v~kl~~RiG~irrT~yGe~F~V~ak~~----asn~Ay~~~~LPlHTD~P~le~  226 (407)
T KOG3888|consen  153 LFQWLQ-ALAKYGIAFLKGAPL-DSGVVRKLGERIGFIRRTTYGETFEVQAKPD----ASNYAYLAGPLPLHTDLPYLEY  226 (407)
T ss_pred             HHHHHH-HHHhheeEEEecCCC-CchHHHHHHhhhcceeeeeccceEEEeecCC----cccceeecCCCCcccCCccccc
Confidence            355555 889999999999998 7789999999999987655552 22222222    2233344578999999999999


Q ss_pred             CCcEEEeecccCCCC-CCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHH
Q 020626          122 FPSKLFFFCEVEPVS-GGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLA  200 (323)
Q Consensus       122 pP~~~~L~c~~~p~~-GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~  200 (323)
                      ||++++|+|+...++ ||.++|+|++.|.+.|.+++||.++.|....+-|..-.... +          ..+      +.
T Consensus       227 ~PgvqiLH~l~qtes~gg~n~lvDgF~Va~~lr~~~pE~FeiL~~~pVd~~dig~D~-~----------~~~------~f  289 (407)
T KOG3888|consen  227 PPGVQILHCLVQTESPGGMNLLVDGFYVAEQLRESHPEAFEILSSVPVDWIDIGSDG-D----------YYI------EF  289 (407)
T ss_pred             CCcceeeeeehhccCCCCcceehhhHHHHHHHHhhCHHHHHHHhhcceeeEeecCCc-c----------ccc------ch
Confidence            999999999998887 99999999999999999999999999998777765321111 0          000      00


Q ss_pred             HHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCCCC---HHHHHH
Q 020626          201 EERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYP---EDIVYN  277 (323)
Q Consensus       201 ~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~---~~~l~~  277 (323)
                      ...                    ..||++.-+-+ |+-.-.|........            .|....+.-   -+.++.
T Consensus       290 h~i--------------------~r~~vI~ld~e-gr~~rIN~s~~~Rds------------~fdvp~e~v~~~y~a~~~  336 (407)
T KOG3888|consen  290 HNI--------------------WRAPVICLDDE-GRVVRINFSNPQRDS------------IFDVPVEQVQPWYRALKL  336 (407)
T ss_pred             hhh--------------------hcCceEEEccc-ceEEEEecCCccccc------------cccCCHHHHHHHHHHHHH
Confidence            001                    12333333222 322111110000000            010000000   145555


Q ss_pred             HHHHHH--HhcccccccCCCEEEEecccccccCCCCCC----Cceeeeccc
Q 020626          278 LMKILE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR----PRHILASLC  322 (323)
Q Consensus       278 l~~~~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g----~Rr~l~~~~  322 (323)
                      +.+.+.  .++++|+.++||+++|||+|++|||++|++    .|.+.++.+
T Consensus       337 F~~~~~~~~n~~~fk~~~gdvv~FnN~RlLHgr~gy~~~~en~R~L~GaY~  387 (407)
T KOG3888|consen  337 FVELANSFSNQFRFKTPPGDVVTFNNLRLLHGRTGYEDTPENQRHLVGAYF  387 (407)
T ss_pred             HHHHHhCcccceEEECCCCCEEEEcceeeeccccccccCccccceeeeeEe
Confidence            555544  456999999999999999999999999964    577777654

>KOG3889 consensus Predicted gamma-butyrobetaine,2-oxoglutarate dioxygenase [Lipid transport and metabolism]

Probab=99.91  E-value=3.3e-24  Score=183.87  Aligned_cols=217  Identities=19%  Similarity=0.215  Sum_probs=153.9

Q ss_pred             HHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCCCCCCCCccccCCCCCCCCCC
Q 020626           44 KPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFP  123 (323)
Q Consensus        44 ~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP  123 (323)
                      ...+-+-|.+||++++.|.+. +.+.-+.+++++-++..++.|....-++-..   -.+.+++...++.|||.+|...+|
T Consensus       127 l~sf~~nlv~YGi~fvd~V~p-T~e~TEkl~~r~~pv~~TffG~mW~Fsd~p~---~~DTAYtkl~lg~HTD~TYF~~~~  202 (371)
T KOG3889|consen  127 LQSFSKNLVKYGIIFVDGVEP-TSEATEKLCQRLVPVHDTFFGQMWVFSDEPA---YEDTAYTKLELGPHTDGTYFDQTP  202 (371)
T ss_pred             HHHHHHHHHheeEEEEcCCCc-hhHHHHHHHHHhhHHHHhhhheeEEecCCCc---cccccceeeeecccCCCceeccCC
Confidence            344555788999999999997 8899999999987654444442211000000   011223456789999999999999


Q ss_pred             cEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHHHHH
Q 020626          124 SKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEER  203 (323)
Q Consensus       124 ~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~  203 (323)
                      ++++|+|+..+.+||+|.|+|+..+.+.|.++.|+-++.|++..+...  +-.+.                         
T Consensus       203 GiQvfHCl~h~gtGG~t~lVDgfy~ae~l~~~~Pe~feiLc~v~i~he--YiE~~-------------------------  255 (371)
T KOG3889|consen  203 GIQVFHCLTHAGTGGDTVLVDGFYCAEKLRNESPEDFEILCNVKISHE--YIEGS-------------------------  255 (371)
T ss_pred             CceEEEeecccCCCCceEEEehHHHHHHHHhhChHhhhHhhcCccchh--hhcCC-------------------------
Confidence            999999999999999999999999999999999999999997655432  11110                         


Q ss_pred             HHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee--eeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHHHH
Q 020626          204 AANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW--FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKI  281 (323)
Q Consensus       204 ~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l--f~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~  281 (323)
                                  .+........-|+|...|-+|+...  ||..-..-                  -..++.+.+.+++++
T Consensus       256 ------------ge~h~H~v~~~p~v~~~p~~~e~~qiR~N~YDRAv------------------fnt~p~ae~~~fY~a  305 (371)
T KOG3889|consen  256 ------------GESHIHSVSLEPPVIERPSFGEITQIRFNPYDRAV------------------FNTLPAAETIKFYEA  305 (371)
T ss_pred             ------------CcccceeeccCCceEecCCCCceEEEEecccchhh------------------hccCCHHHHHHHHHH
Confidence                        0000111123488888898887653  44321111                  123555555555543


Q ss_pred             H---------HHhcccccccCCCEEEEecccccccCCCCCCCceeeecc
Q 020626          282 L---------EEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASL  321 (323)
Q Consensus       282 ~---------~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g~Rr~l~~~  321 (323)
                      +         +++.+.++++||-++++||+|+||||+.|+|.|.+.++.
T Consensus       306 ~r~l~~i~r~p~n~~~ikL~PGsvifiDNwRvLHgRe~ftGyRqmcGcY  354 (371)
T KOG3889|consen  306 YRKLSKICRNPDNSIEIKLRPGSVIFIDNWRVLHGRESFTGYRQMCGCY  354 (371)
T ss_pred             HHHHHHHhcCccceEEEEecCceEEEEeceeEecCcccccchhhhccee
Confidence            3         468899999999999999999999999999999887653

>PRK02963 carbon starvation induced protein; Validated

Probab=99.87  E-value=1.9e-21  Score=173.74  Aligned_cols=195  Identities=17%  Similarity=0.202  Sum_probs=126.7

Q ss_pred             hccEEEEecCCCC---ChhHHHHHHHHhCC-CCCCCccCCCC----ceeecCceeecCCC-C-CCCCccccCCCCCCCCC
Q 020626           53 KAGAVLLRGFDVK---TANDFNDVVEAFGY-EELPYVGGAAP----RSHVVGRVFTANES-S-LDRNIPFHQEMALLPQF  122 (323)
Q Consensus        53 ~~Gvvl~rg~~~~---~~e~~~~~~~~~G~-~~~~~~g~~~~----r~~~~~~v~~~~~~-~-~~~~~~~HtD~sy~~~p  122 (323)
                      ++|..++--..++   ++++++++++++|. +..++.|+...    +-.+... ..++.. . ....+++|||++|...|
T Consensus        85 ~~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~I~~t~fg~m~g~~ya~F~Vk~~-~~~~~ya~~a~t~L~lHTD~pY~e~p  163 (316)
T PRK02963         85 AEGAFLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNV-DNSDSYLRQPHRVMELHNDGTYVEEI  163 (316)
T ss_pred             ccCceEeecccCCccCCHHHHHHHHHHhhhccCCCCccccccceeeEEEEEec-CCccchhhhhccCCCCcCCCCCccCC
Confidence            5777777655553   68999999999998 55555543220    1111100 001111 0 11248999999999999


Q ss_pred             CcEEEeecccC-CCCCCCcccc--cHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHH
Q 020626          123 PSKLFFFCEVE-PVSGGDTPLV--LSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSL  199 (323)
Q Consensus       123 P~~~~L~c~~~-p~~GGeT~~a--d~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~  199 (323)
                      |++++|+|... ...||+|.|+  |+.++.+.|.+ +|     |.+.++.|.....                   +    
T Consensus       164 PGlQlLl~~~~~~~~GGeS~lVhvDGF~vAe~Lr~-~P-----Lt~~pV~~~~~~~-------------------~----  214 (316)
T PRK02963        164 TDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHFFR-HP-----LARRPMRWAAPPS-------------------K----  214 (316)
T ss_pred             CCceeeeeeccCCCCCcCeeeEcCCcHHHHHHHHh-Cc-----CcCCceeeeecCC-------------------C----
Confidence            99976777654 4789999997  99999999996 67     7877776642110                   0    


Q ss_pred             HHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCcceecCCCCC---CCHHHH
Q 020626          200 AEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSP---YPEDIV  275 (323)
Q Consensus       200 ~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~~---~~~~~l  275 (323)
                                       .  ......+|++..++ .|+..+ ||...                     ..|   .....+
T Consensus       215 -----------------~--~~~~~~~PVI~lD~-~G~l~ir~nd~~---------------------~~P~~~~~~~Y~  253 (316)
T PRK02963        215 -----------------N--VSKDVFHPVFDVDQ-QGRPVMRYIDQF---------------------VQPKDFEEGVWL  253 (316)
T ss_pred             -----------------c--cceeeecceEEECC-CCCEEEEEcCCC---------------------CCChHHHHHHHH
Confidence                             0  11234689888886 587753 33110                     011   112234


Q ss_pred             HHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC---Cceee
Q 020626          276 YNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR---PRHIL  318 (323)
Q Consensus       276 ~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g---~Rr~l  318 (323)
                      ..+.+.+  +++++.++++|||++++||+|+||||++|++   .+|+|
T Consensus       254 ~~f~~~L~~p~~~~~fkL~pGd~vvfDN~RVLHGR~aF~~~~g~~R~L  301 (316)
T PRK02963        254 SELSDALETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL  301 (316)
T ss_pred             HHHHHHHhCchhEEEEecCCceEEEEeCeEEeeCCCCcCCCCCCceEE
Confidence            4444443  4688999999999999999999999999963   44544

>PF08943 CsiD: CsiD; InterPro: IPR015038 This group of proteins consists of various bacterial proteins pertaining to the non-haem Fe(II)-dependent oxygenase family

Probab=98.31  E-value=2.4e-06  Score=74.05  Aligned_cols=195  Identities=16%  Similarity=0.211  Sum_probs=81.9

Q ss_pred             hccEEEEecCCCC---ChhHHHHHHHHh----CCCCC-CCccCCCCceeecCceeecCCC--CCCCCccccCCCCCCCCC
Q 020626           53 KAGAVLLRGFDVK---TANDFNDVVEAF----GYEEL-PYVGGAAPRSHVVGRVFTANES--SLDRNIPFHQEMALLPQF  122 (323)
Q Consensus        53 ~~Gvvl~rg~~~~---~~e~~~~~~~~~----G~~~~-~~~g~~~~r~~~~~~v~~~~~~--~~~~~~~~HtD~sy~~~p  122 (323)
                      ++|..++--+.+.   ..+.+++|+.++    |...+ ...|..-.|-.+. |+=.++.+  .....+.+|||++|....
T Consensus        72 ~~G~f~i~~~g~~~~~q~d~~Vk~sTAi~HLiG~pNfDaMsGkYYARF~Vk-n~DnSDSYLRqa~r~meLHnDGTyV~E~  150 (297)
T PF08943_consen   72 NTGAFLIGPEGLDQVEQADDMVKFSTAISHLIGRPNFDAMSGKYYARFVVK-NTDNSDSYLRQAYRRMELHNDGTYVDER  150 (297)
T ss_dssp             T--EEEEEETT--SGGGHHHHHHHHHHHHHHHEEE---TTTSSSSEEEEEE---------TT-TT--EEEE-S-TTSSS-
T ss_pred             ccCceEeccccccchhchhhhHhHHHHHHHHhCCCchhhcCceeEEEEEEe-cCCCchhhhhcccceeeeecCCceeccc
Confidence            5888888777663   356777777665    43322 1122222233221 11111111  234567899999999999


Q ss_pred             CcEEEeecc-cCCCCCCCcccccHHHHHHHhhhhChHHH-HHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHH
Q 020626          123 PSKLFFFCE-VEPVSGGDTPLVLSHIVYERMKESYPEFV-QQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLA  200 (323)
Q Consensus       123 P~~~~L~c~-~~p~~GGeT~~ad~~~a~~~L~~~~pe~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~  200 (323)
                      -+++++.=. +.-..||+|.+-..-. |++|.    .+. .-|.+..+.+..  +.+                 +     
T Consensus       151 TD~vLMmKidEqN~~GG~S~lLHLDD-We~ld----~f~~hplak~~~~w~a--P~S-----------------K-----  201 (297)
T PF08943_consen  151 TDWVLMMKIDEQNMEGGESLLLHLDD-WEDLD----KFYNHPLAKQPFVWGA--PPS-----------------K-----  201 (297)
T ss_dssp             --EEEEEEEEEES--B--EEEEEGGG--TTHH----HHHTSGGGGS-EEE----SS------------------T-----
T ss_pred             cceeeeeeehhhhccCcceeeeeccc-HHHHH----HHhcCcccccceeecC--CCC-----------------c-----
Confidence            999877765 3455899999764321 23332    111 223433333321  100                 0     


Q ss_pred             HHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHH
Q 020626          201 EERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLM  279 (323)
Q Consensus       201 ~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~  279 (323)
                                       . +.....||++..--..|+|+. |......           |.+  +     ..-..|..|-
T Consensus       202 -----------------N-v~~~v~hpvFF~~d~~g~P~m~fIDQF~q-----------P~n--~-----eeg~~L~~ls  245 (297)
T PF08943_consen  202 -----------------N-VSYDVEHPVFFEEDSNGKPHMSFIDQFVQ-----------PKN--M-----EEGLYLNELS  245 (297)
T ss_dssp             -----------------T-----EEE-S-EEE-TTS-EEE---TTTEE-------------S--H-----HHHHHHHHHH
T ss_pred             -----------------c-ccceeeccccccccCCCCeeEEEeeccCC-----------CCc--H-----HHHHHHHHHH
Confidence                             0 223456888433334588864 3221100           000  0     0113556666


Q ss_pred             HHHH--HhcccccccCCCEEEEecccccccCCCCCC
Q 020626          280 KILE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR  313 (323)
Q Consensus       280 ~~~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g  313 (323)
                      +..+  +.+..++.-+|++|+++|+..||||.+|+.
T Consensus       246 ~slE~s~~~~~v~vpvG~~lv~NN~fwLHGR~~F~~  281 (297)
T PF08943_consen  246 ESLENSKNKFSVPVPVGSFLVINNHFWLHGRDKFEP  281 (297)
T ss_dssp             HHHHT-TT-EEE---TT-EEEEETTTEEEEE--B--
T ss_pred             HHHhcCCCeEEEEcCCCcEEEEeeEEEEeccCCCCC
Confidence            5554  578999999999999999999999999963

CsiD of Escherichia coli is induced on carbon starvation. Its expression is sigma-S dependent and additionally requires activation by cAMP-CRP []. The exact function and role of CsiD is unknown, but a putative role may involve the control of utilisation of gamma-aminobutyric acid and glutamate accumulation in general stress adaption []. ; GO: 0005506 iron ion binding; PDB: 2R6S_A 1JR7_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	323
1y0z_A	330	X-Ray Structure Of Gene Product From Arabidopsis Th		1e-127

>pdb|1Y0Z|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At3g21360 Length = 330

Iteration: 1
 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 209/325 (64%), Positives = 260/325 (80%), Gaps = 6/325 (1%)
Query: 5   FAEIKLAEQKSYNSIPFPWVLTPNSTT------NLSFLTETIRTQKPFLESLLLKAGAVL 58
             E  + +QK Y S PFP V++P S +      +L   T+TI+TQK +L+SLL ++GAVL
Sbjct: 6   LVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVL 65
Query: 59  LRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMAL 118
            RGF V +A+DFNDVVEAFG++ELPYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA 
Sbjct: 66  FRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQ 125
Query: 119 LPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKD 178
           + +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E D
Sbjct: 126 VREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDD 185
Query: 179 DLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRK 238
           D +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK
Sbjct: 186 DPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRK 245
Query: 239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLL 298
           +WFNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLL
Sbjct: 246 VWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLL 305
Query: 299 IDNLAVLHARRSSSRPRHILASLCK 323
           IDN AVLH+RR    PR +LASLCK
Sbjct: 306 IDNWAVLHSRRPFDPPRRVLASLCK 330

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	323
2q4a_A	330	Clavaminate synthase-like protein AT3G21360; ensem	4e-92
2og5_A	357	Putative oxygenase; non-ribosomal peptide synthesi	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1ds1_A	324	Clavaminate synthase 1; oxygenase, trifunctional e	2e-05
2wbq_A	358	L-arginine beta-hydroxylase; oxidoreductase, non-h	3e-05

>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A* Length = 357

 Score = 45.6 bits (107), Expect = 1e-05
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 5/48 (10%)

Query: 276 YNLMKILEEECVAIPWQNGDVLLIDNLAVLHAR-----RSSSRPRHIL 318
             L    +   V      G++ ++DN   +H R     R     R + 
Sbjct: 281 RELQAHFDATAVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQ 328

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 56/331 (16%), Positives = 103/331 (31%), Gaps = 120/331 (36%)

Query: 13  QKSYNSIPFPWVLTPNSTTNLSFLTETIRT-------QKPFLESLLLKAGAVLLRGFDVK 65
           QK    I   W    + ++N+     +I+         KP+   LL+      L   +V+
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV------LL--NVQ 254

Query: 66  TANDFNDVVEAFG----------YEELPYVGGAAPRSHVV----GRVFTANES-SLDRNI 110
            A        AF           ++++     AA  +H+         T +E  SL    
Sbjct: 255 NAK----AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 111 PFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKE--SYPEFVQQLEQDGL 168
                   LP+         EV   +    P  LS I+ E +++  +  +  + +  D L
Sbjct: 311 -LDCRPQDLPR---------EVLTTN----PRRLS-IIAESIRDGLATWDNWKHVNCDKL 355

Query: 169 IYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPA 228
             T I +   ++  P           E + + +     L +   +            IP 
Sbjct: 356 --TTIIESSLNVLEPA----------EYRKMFDR----LSV---FPPS--AH-----IPT 389

Query: 229 VTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMK--ILE--- 283
           +    I     WF+ I          ++D                +V  L K  ++E   
Sbjct: 390 ILLSLI-----WFDVI----------KSDV-------------MVVVNKLHKYSLVEKQP 421

Query: 284 -EECVAIPWQNGDVLL-----IDNLAVLHAR 308
            E  ++IP     + L     ++N   LH  
Sbjct: 422 KESTISIP----SIYLELKVKLENEYALHRS 448

>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A* Length = 324

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 32/233 (13%), Positives = 58/233 (24%), Gaps = 65/233 (27%)

Query: 93  HVVGRVFTANESSL--DRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYE 150
            V       + SS   +  + FH EMA     P+ +   C           LV S     
Sbjct: 122 DVYPSPGAHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKAL 181

Query: 151 RMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLK 210
            + +       +L    +                                          
Sbjct: 182 PLLD--ERTRARLLDRRMPCCVDV------------------------------------ 203

Query: 211 LEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPY 270
             +         +  +  +  D       +   ++                       P 
Sbjct: 204 -AFRGGVDDPGAIAQVKPLYGDADDPFLGYDRELLAPED-------------------PA 243

Query: 271 PEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHAR-----RSSSRPRHIL 318
            ++ V  L K L+E   A+  + GD+L++DN    HAR     R   + R + 
Sbjct: 244 DKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLH 296

>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A* Length = 358

 Score = 44.6 bits (104), Expect = 3e-05
 Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 50/224 (22%)

Query: 100 TANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEF 159
           T   SS  + + +H E A  P     +       P     T      +    + +     
Sbjct: 155 TLVSSSSRQELGWHTEDAFSPYRADYVGLLSLRNPDGVATT------LAGVPLDDLDERT 208

Query: 160 VQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGV 219
           +  L Q+     R       + + T +  +  F    ++                     
Sbjct: 209 LDVLFQE-RFLIRPDDSHLQVNNSTAQQGRVEFEGIAQAADRPE---------------- 251

Query: 220 KTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLM 279
                P+  +T  +     +  +    A                   G       +  L 
Sbjct: 252 -----PVAILTGHRAAPH-LRVDGDFSAPA----------------EGDEEAAAALGTLR 289

Query: 280 KILEEECVAIPWQNGDVLLIDNLAVLHAR-----RSSSRPRHIL 318
           K+++     +    GDV  IDN   +H R     R   R R + 
Sbjct: 290 KLIDASLYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLK 333

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	323
2q4a_A	330	Clavaminate synthase-like protein AT3G21360; ensem	100.0
1oih_A	301	Putative alkylsulfatase ATSK; non-heme Fe(II) alph	100.0
3pvj_A	277	Alpha-ketoglutarate-dependent taurine dioxygenase;	100.0
1otj_A	283	Alpha-ketoglutarate-dependent taurine dioxygenase;	100.0
3r1j_A	301	Alpha-ketoglutarate-dependent taurine dioxygenase;	100.0
3eat_X	293	Pyoverdine biosynthesis protein PVCB; paerucumarin	100.0
1nx8_A	273	CARC, carbapenem synthase; jelly roll, unknown fun	100.0
3o2g_A	388	Gamma-butyrobetaine dioxygenase; gamma-butyrobetai	100.0
2og5_A	357	Putative oxygenase; non-ribosomal peptide synthesi	99.97
1ds1_A	324	Clavaminate synthase 1; oxygenase, trifunctional e	99.97
2wbq_A	358	L-arginine beta-hydroxylase; oxidoreductase, non-h	99.96
1jr7_A	311	GABT protein, hypothetical 37.4 kDa protein in ILE	99.9

>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*

Probab=100.00  E-value=1.8e-44  Score=328.98  Aligned_cols=258  Identities=14%  Similarity=0.144  Sum_probs=175.9

Q ss_pred             CceEEecCCCC-----ChhhHHHHH-HhhHHHHHHHHhhccEEEEecCC-CCChhHHHHHHHHhCCCCCCCccCCCCcee
Q 020626           21 FPWVLTPNSTT-----NLSFLTETI-RTQKPFLESLLLKAGAVLLRGFD-VKTANDFNDVVEAFGYEELPYVGGAAPRSH   93 (323)
Q Consensus        21 ~p~~~~~~~~~-----~~~~l~~~~-~~~~~~l~~~l~~~Gvvl~rg~~-~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~   93 (323)
                      .++-|+|.++.     ...+|.+++ ++..++|+++|.+||+|+||||+ + +++++.+|+++||.+...+..+..+.  
T Consensus        13 ~~~~i~~l~~~~Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l-~~~~~~~~~~~fG~l~~~~~~~~~~~--   89 (301)
T 1oih_A           13 LELDVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHL-DDQSQEGFAKLLGEPVAHPTVPVVDG--   89 (301)
T ss_dssp             CCCEEEESSSSSCEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHTTSCBCC----CCCTT--
T ss_pred             CceEEEECCCCcceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHHhCCCccCcCCCCCCC--
Confidence            34556665541     222455555 56789999999999999999999 9 79999999999998643322211111  


Q ss_pred             ecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEE
Q 020626           94 VVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRI  173 (323)
Q Consensus        94 ~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~  173 (323)
                       .+.|+.....++...+.||+|++|.+.||.+++|+|+++|+.||+|.|||+++||+.|+   ++++++|+++.+.|...
T Consensus        90 -~~~v~~v~~~~~~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad~~~ay~~L~---~~~~~~~~~l~~~~~~~  165 (301)
T 1oih_A           90 -TRYLLQLDGAQGQRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELP---EPLRELADKLWAVHSNE  165 (301)
T ss_dssp             -CSSCEEEC-----CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHHHCEEEEECC
T ss_pred             -CCceEEEecCCCCcCcCCEecccCcCCCCceEEEEEeecCCCCCccccccHHHHHHhCC---HHHHHHHhcCEEEEccc
Confidence             13455442222356788999999999999999999999999999999999999999999   78889998776666432


Q ss_pred             ecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhcccccc
Q 020626          174 YQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKD  253 (323)
Q Consensus       174 ~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~  253 (323)
                      +.        ....|+..  +++  +++.++       +|..++.   +...||+|++||+||+++||++....++.++ 
T Consensus       166 ~~--------~~~~~~~~--~~~--~~~~~~-------~~~~~~~---~~~~hPvV~~hP~tG~~~l~~~~~~~~i~gl-  222 (301)
T 1oih_A          166 YD--------YASLKPDI--DPA--KLERHR-------KVFTSTV---YETEHPVVRVHPISGERALQLGHFVKRIKGY-  222 (301)
T ss_dssp             --------------------------------------------C---CEEEEESEEECTTTCCEEECCSTTEEEETTS-
T ss_pred             cc--------cccccccc--ccc--hhhhhh-------hhhhccC---CceECCCEEecCCCCcEEEEeccCcccccCC-
Confidence            11        11234322  111  222222       2443332   3567999999999999999987444444222 


Q ss_pred             CCCCCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeecc
Q 020626          254 TQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILASL  321 (323)
Q Consensus       254 ~~~~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~~  321 (323)
                                   ..+.++++++.|.+.+  ++++|+|+|++||||||||++++|+|++|.| .+|+|.+.
T Consensus       223 -------------~~~e~~~ll~~l~~~~~~~~~~~~~~w~~GDvvi~DNr~~lH~r~~f~~~~~R~l~R~  280 (301)
T 1oih_A          223 -------------SLADSQHLFAVLQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRV  280 (301)
T ss_dssp             -------------CHHHHHHHHHHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEE
T ss_pred             -------------CHHHHHHHHHHHHHHHhCccceEEEEEcCCCEEEEEccceeecccCCCCCCceEEEEE
Confidence                         1234567888888766  7899999999999999999999999999976 46666554

>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*

Probab=100.00  E-value=9.2e-42  Score=306.91  Aligned_cols=241  Identities=17%  Similarity=0.201  Sum_probs=167.7

Q ss_pred             hHHHH-HHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCC--CCCCc
Q 020626           35 FLTET-IRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESS--LDRNI  110 (323)
Q Consensus        35 ~l~~~-~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~--~~~~~  110 (323)
                      +|.++ .++..++|+++|.+||||+||||++ +++++.+|+++||.+.. ++.+ ..+.   .+.|+.....+  ....+
T Consensus        20 dl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l-~~~~~~~fa~~fG~l~~~p~~~-~~~~---~~~i~~i~~~~~~~~~~~   94 (277)
T 3pvj_A           20 DISRDISAEERDAIEQALLQHQVLFLRDQPI-NPEQQARFAARFGDLHIHPIYP-NVPD---TPQVLVLDTAVTDVRDNA   94 (277)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHSEEEESSCCC-CHHHHHHHHGGGSCEECCSSSC-EETT---EEEEEEEETTTSCCGGGS
T ss_pred             CccccCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCCcccCccC-CCCC---CCeEEEEecCCCCCCcCC
Confidence            44443 3567899999999999999999999 89999999999998643 2222 1111   11233221111  23467


Q ss_pred             cccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccc
Q 020626          111 PFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKS  190 (323)
Q Consensus       111 ~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~  190 (323)
                      .||+|++|.+.||.+++|+|+++|+.||+|.|||+++||+.|+   +++++.|++  +...+.....          +..
T Consensus        95 ~wH~D~sy~~~pp~~~~l~~~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~--l~a~h~~~~~----------~~~  159 (277)
T 3pvj_A           95 VWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALS---APLREMLDG--LTATHDFTKS----------FPL  159 (277)
T ss_dssp             SCBCTTTTSSSCCCEEEEEEEECCSSCCCEEEEEHHHHHHHSC---HHHHHHHTT--CEEEECGGGT----------SCG
T ss_pred             CceeeCCCcCCCCceEEEEeeccCCCCCCcEeeeHHHHHHhCC---HHHHHHHhc--cEEEeCcHHH----------hhh
Confidence            8999999999999999999999999999999999999999999   889999984  4554433111          110


Q ss_pred             -ccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeec-cchhccccccCCCCCCcceecCCCC
Q 020626          191 -IFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNS-IVMAYTCWKDTQNDPVKAVTFGNGS  268 (323)
Q Consensus       191 -~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~-~~~~~~~~~~~~~~~~~~~~~~dg~  268 (323)
                       .+. ...++...+.....           ..+...||+|++||+||++++|.+ .+..++.++              ..
T Consensus       160 ~~~~-~~~~~~~~~~~~~~-----------~~~~~~hPvVr~hP~TG~k~L~vn~~~~~~i~gl--------------~~  213 (277)
T 3pvj_A          160 ERFG-TTPQDLARWEATRR-----------NNPPLSHPVVRTHPVSGRKALFVNEGFTTRINEL--------------SE  213 (277)
T ss_dssp             GGTC-SSHHHHHHHHHHHH-----------HSCCEEEESEEECTTTCCEEECCCTTTEEEETTS--------------CH
T ss_pred             hhcc-CCchhccchhhhhc-----------cCCCCcCCeEEecCCCCCEEEEeccccceeecCC--------------CH
Confidence             000 01111111100000           012356999999999999998754 444454332              12


Q ss_pred             CCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC-CCceeeecc
Q 020626          269 PYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS-RPRHILASL  321 (323)
Q Consensus       269 ~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~-g~Rr~l~~~  321 (323)
                      +.++++|+.|.+.+  ++++|+|+|++||++||||++++|+|+++. +.+|++.+.
T Consensus       214 ~es~~ll~~L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~  269 (277)
T 3pvj_A          214 LESDALLRLLFAHATRPEFSIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRA  269 (277)
T ss_dssp             HHHHHHHHHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEeeCCCCEEEEeCCceeeeccCCCCCCccEEEEE
Confidence            34567888887754  689999999999999999999999999864 456666553

>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A

Probab=100.00  E-value=3.3e-41  Score=304.89  Aligned_cols=242  Identities=19%  Similarity=0.164  Sum_probs=166.1

Q ss_pred             hHHHHH-HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCC--CCCCc
Q 020626           35 FLTETI-RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESS--LDRNI  110 (323)
Q Consensus        35 ~l~~~~-~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~--~~~~~  110 (323)
                      +|.+++ ++..++|+++|.+||+|+||||++ +++++.+|+++||.+.. ++.+. .+..   +.++..+..+  .....
T Consensus        22 dl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~-~~~~~~~~~~~~G~~~~~~~~~~-~~~~---~~i~~v~~~~~~~~~~~   96 (283)
T 1otj_A           22 DLTRPLSDNQFEQLYHAVLRHQVVFLRDQAI-TPQQQRALAQRFGELHIHPVYPH-AEGV---DEIIVLDTHNDNPPDND   96 (283)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHSEEEECSCCC-CHHHHHHHHHTTSCBCCCSSSCE-ETTE---EEEEEEEEBTTBCCCCC
T ss_pred             CcCccCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCCCcCCCCCC-CCCC---CeEEEEeCCCCCCCcCC
Confidence            344433 557899999999999999999998 89999999999998643 23331 1111   1222221111  12456


Q ss_pred             cccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccc
Q 020626          111 PFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKS  190 (323)
Q Consensus       111 ~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~  190 (323)
                      .||||++|.+.||++++|+|+++|+.||+|.|||+++||+.|+   +++++.|+.+...|...+.          ..|+.
T Consensus        97 ~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~l~~~~~~~~~----------~~~~~  163 (283)
T 1otj_A           97 NWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALS---VPFRQLLSGLRAEHDFRKS----------FPEYK  163 (283)
T ss_dssp             SCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHTTCEEEECHHHH----------SCGGG
T ss_pred             CcEeeccCccCCCceEEEEEEecCCCCCcceeeeHHHHHHhCC---HHHHHHHhCcEEEEcchhh----------cchhh
Confidence            8999999999999999999999999999999999999999999   7888888865544421111          11222


Q ss_pred             ccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeee-eccchhccccccCCCCCCcceecCCCCC
Q 020626          191 IFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWF-NSIVMAYTCWKDTQNDPVKAVTFGNGSP  269 (323)
Q Consensus       191 ~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf-~~~~~~~~~~~~~~~~~~~~~~~~dg~~  269 (323)
                      .++.+  .+.+.+....        +   ..+...||+|++||.||++++| |+....++.+++              .+
T Consensus       164 ~~g~~--~~~~~~~~~~--------~---~~~~~~~Pvv~~hp~tG~~~l~~n~~~~~~i~g~~--------------~~  216 (283)
T 1otj_A          164 YRKTE--EEHQRWREAV--------A---KNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVS--------------EK  216 (283)
T ss_dssp             SCSSH--HHHHHHHHHH--------H---HCCCEEEESEEECTTTCCEEECCCTTTEEEESSSC--------------HH
T ss_pred             cccCc--cccccccccc--------c---cCCCccCCeEEeCCCCCcEEEEecccccccCCCCC--------------HH
Confidence            22210  0111111100        0   1123579999999999999865 544444443221              22


Q ss_pred             CCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC-CCceeeecc
Q 020626          270 YPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS-RPRHILASL  321 (323)
Q Consensus       270 ~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~-g~Rr~l~~~  321 (323)
                      .++++++.|.+.+  ++++|+|+|++||+|||||++++|+|++|. +.+|+|.+.
T Consensus       217 e~~~ll~~l~~~~~~~~~~~~~~w~~GDv~i~DN~~~lH~r~~f~~~~~R~l~R~  271 (283)
T 1otj_A          217 ESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRA  271 (283)
T ss_dssp             HHHHHHHHHHHHTTCGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCcEEEeeEcCCCEEEEECcceeecccCCCCCCceEEEEE
Confidence            3456777776653  578999999999999999999999999985 456666654

>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A

Probab=100.00  E-value=1.1e-40  Score=302.82  Aligned_cols=237  Identities=12%  Similarity=0.114  Sum_probs=157.8

Q ss_pred             HHhhHHHHHHHHhhccEEEEecC-CCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCCCCCCccccCCCC
Q 020626           40 IRTQKPFLESLLLKAGAVLLRGF-DVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMA  117 (323)
Q Consensus        40 ~~~~~~~l~~~l~~~Gvvl~rg~-~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~s  117 (323)
                      .++..++|+++|.+||||+|||| ++ +++++.+|+++||.+.. ++.+... .. ..+.++...... +..+.||+|++
T Consensus        32 ~d~~~~~l~~al~~~gvv~fR~q~~l-~~~~~~~fa~~fG~l~~hp~~~~~~-~~-~~pei~~i~~~~-~~~~~wH~D~s  107 (301)
T 3r1j_A           32 DDATVEQIRRALLTHKVIFFRHQHHL-DDSRQLEFARLLGTPIGHPAASALA-AK-HLPVITPIDSEY-GKATRWHTDVT  107 (301)
T ss_dssp             CHHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHHHSCBBC---------------------------CCSCBCTTT
T ss_pred             CHHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHhcCCccccccccCCC-CC-CCCcEEEEeCCC-CCCCCCccccC
Confidence            35678999999999999999999 88 89999999999998742 3212110 00 011222211111 24678999999


Q ss_pred             CCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCCh
Q 020626          118 LLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDK  197 (323)
Q Consensus       118 y~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~  197 (323)
                      |.+.||.+++|+|+++|+.||+|.|||+++||+.|+   +++++.|+++.+.+.  ....          +.......  
T Consensus       108 ~~~~pp~~~~l~~~~~p~~GG~T~fad~~~ay~~L~---~~~~~~~~~l~a~h~--~~~~----------~~~~~~~~--  170 (301)
T 3r1j_A          108 FAANYPAASILRAVTLPSYGGSTLWASTVAAYQQLP---EPLRHLTENLWALHT--NRYD----------YVRNDPMN--  170 (301)
T ss_dssp             TSSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTCC---HHHHHHHTTCEEEEE--CC----------------------
T ss_pred             CccCCCceeEEEEeecCCCCCCCeeEcHHHHHHhCC---HHHHHHHhcCEEEEc--chhh----------hhhhcccc--
Confidence            999999999999999999999999999999999999   899999986544443  2110          00000000  


Q ss_pred             HHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCCCCHHHHHH
Q 020626          198 SLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYN  277 (323)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~  277 (323)
                      ...+....      .+.  +  ..+...||+|++||+||+++||.+.+..++.++              ..+.++++|+.
T Consensus       171 ~~~~~~~~------~~~--~--~~~~~~hPvVr~hP~TG~k~L~v~~~~~~i~gl--------------~~~Es~~lL~~  226 (301)
T 3r1j_A          171 DTQRAFRQ------AFE--K--PDFRTEHPVVRVHPETGERALLAGDFVRGFVGL--------------DGHESSVLLEL  226 (301)
T ss_dssp             ----------------------CCCEEEEESEEECTTTCCEEECCSTTEEEETTS--------------CHHHHHHHHHH
T ss_pred             ccchhhcc------ccc--c--cCCccccceEEECCCCCCeEEEeccccccccCC--------------CHHHHHHHHHH
Confidence            00000000      000  0  113457999999999999998764444444322              22345678888


Q ss_pred             HHHHH--HHhcccccccCCCEEEEecccccccCCC-CCCCceeeecc
Q 020626          278 LMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRS-SSRPRHILASL  321 (323)
Q Consensus       278 l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~-f~g~Rr~l~~~  321 (323)
                      |.+.+  ++++|+|+|++||++||||+++||+|+. |.+.+|+|.+.
T Consensus       227 L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~  273 (301)
T 3r1j_A          227 LQRRITMPENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRI  273 (301)
T ss_dssp             HHHHHTCGGGEEEECCCTTCEEEEETTSEEEEECCCSTTCCCEEEEE
T ss_pred             HHHHhcCCCeEEEeeeCCCCEEEEEcCceeecccCCCCCCCeEEEEE
Confidence            87754  6899999999999999999999999986 44556666553

>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.9e-40  Score=299.54  Aligned_cols=246  Identities=17%  Similarity=0.221  Sum_probs=165.7

Q ss_pred             CCceEEecCCCCChhhHHHHHHhhHHHHHHHHhhccEEEEecCC-CCChhHHHHHHHHhCCCCCCCccCCCCceeecCce
Q 020626           20 PFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFD-VKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRV   98 (323)
Q Consensus        20 ~~p~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~-~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v   98 (323)
                      .|+..|+...-..  .|   .++..++|+++|.+||||+||||+ +.+++++.+|+++||.+.....+... .....++ 
T Consensus        26 ~~GaeI~gvdl~~--~l---~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~~~~~~a~~fG~l~~~~~g~~~-~v~~~~~-   98 (293)
T 3eat_X           26 RFGLLLEPGRPGM--HV---GELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVL-ELVEQEG-   98 (293)
T ss_dssp             SSCEEEEESSTTC--BG---GGSCHHHHHHHHHHHSEEEECSCBCCSSHHHHHHHHHHHSCBCCBTTBSCE-EEEECTT-
T ss_pred             CCceEEECCCCCc--Cc---CHHHHHHHHHHHHHhCEEEECCCCCCCCHHHHHHHHHHhCCCccccccCeE-EEEeCCC-
Confidence            4666666643210  12   234789999999999999999998 55899999999999987543333210 0000000 


Q ss_pred             eecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCC--CCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecC
Q 020626           99 FTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPV--SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQE  176 (323)
Q Consensus        99 ~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~--~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~  176 (323)
                       ..+....+..+.||+|++|.+.||.+++|+|+++|+  .||+|.|||+++||+.|+   |+++++|+++.+.|...  .
T Consensus        99 -~~~~~yt~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~ay~~L~---~~~~~~l~~~~~~~~~~--~  172 (293)
T 3eat_X           99 -AEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLAD---SSELELWRRASGRYQRS--A  172 (293)
T ss_dssp             -CCCTTTSCSCEEEECTTTTSSEEEEEEEEEEEECCSCCSBCCEEEEEHHHHHHHCC---HHHHHHHHHCEEEEECC---
T ss_pred             -cccccccCCCccceECCCCcCCCCceEEEEeEeCCCCCCCCceEEeeHHHHHHhCC---HHHHHHHhhCceEEEec--c
Confidence             001112344688999999999999999999999997  899999999999999999   89999999887776511  0


Q ss_pred             CCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEe-cCCCCceeeeeccchhccccccCC
Q 020626          177 KDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTY-DKIRQRKIWFNSIVMAYTCWKDTQ  255 (323)
Q Consensus       177 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~-hP~TG~~~lf~~~~~~~~~~~~~~  255 (323)
                      .         .+......              ..++       ..+...||+|++ ||+||+++||.+.++.++.++   
T Consensus       173 ~---------~~~~~~~~--------------p~~~-------~~~~~~hp~Vr~~hP~tG~k~L~v~~~~~~i~g~---  219 (293)
T 3eat_X          173 A---------HYSSRSAA--------------PIVE-------RHPRREFPILRFCEPPVEGDASFINPSEFHYDGI---  219 (293)
T ss_dssp             -------------CEEEE--------------ESEE-------ECTTTCCEEECCCCCC----------CCEEEESS---
T ss_pred             c---------cccCccCC--------------ceEE-------ECCCCCcceEEecCCCCcccceecCccccccCCC---
Confidence            0         00000000              0000       011246999999 899999999865554444332   


Q ss_pred             CCCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeeccc
Q 020626          256 NDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILASLC  322 (323)
Q Consensus       256 ~~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~~~  322 (323)
                                 ..+.++++++.|.+.+  ++++|+|+|++||||||||+++||+|++|.+ .+|+|.+.+
T Consensus       220 -----------~~~es~~ll~~L~~~~~~p~~~~~~~w~~GDlviwDNr~vlH~r~~~~~~~~R~l~R~~  278 (293)
T 3eat_X          220 -----------APEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVH  278 (293)
T ss_dssp             -----------CTTTHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCBSSCCCEEEEEEE
T ss_pred             -----------CHHHHHHHHHHHHHHHhCcccEEEEEcCCCCEEEEeCCceEEcccCCCCCCceEEEEEE
Confidence                       2456678888888765  5799999999999999999999999999964 677776643

>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*

Probab=100.00  E-value=1.7e-39  Score=292.23  Aligned_cols=230  Identities=18%  Similarity=0.230  Sum_probs=163.9

Q ss_pred             hhhHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCC---CC--CC
Q 020626           33 LSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANE---SS--LD  107 (323)
Q Consensus        33 ~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~---~~--~~  107 (323)
                      ..+|.++ +  .++|+++|.+||+++||||++ +++++.+|+++||.+.. +.....++....+.|+..+.   .+  +.
T Consensus        21 g~dl~~~-~--~~~l~~~l~~~G~v~~rg~~~-~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~~~~   95 (273)
T 1nx8_A           21 HRDFLEA-K--TETIKNLLMRQGFVVVKNLDI-DSDTFRDIYSAYGTIVE-YADEKIGVGFGYRDTLKLEGEKGKIVTGR   95 (273)
T ss_dssp             HHHHHHS-C--HHHHHHHHHHHCEEEECSCCC-CHHHHHHHHHTTSEECC-C-----------CCSEEECCCTTCSTTSS
T ss_pred             CCCcccC-C--HHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCccc-cccccccCCCCCCceEEecCCCCCccccc
Confidence            4477777 3  899999999999999999998 89999999999997532 11100011111122332211   11  34


Q ss_pred             CCccccCCCCCCCCCCcEEEeecccCCC--CCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCC
Q 020626          108 RNIPFHQEMALLPQFPSKLFFFCEVEPV--SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTG  185 (323)
Q Consensus       108 ~~~~~HtD~sy~~~pP~~~~L~c~~~p~--~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~  185 (323)
                      ..+.||||++|.+.||++++|+|+++|+  .||+|.|||+++||+.|+   ++.++.|+++...+...  .         
T Consensus        96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~a~~~L~---~~~~~~l~~l~~~~~~~--~---------  161 (273)
T 1nx8_A           96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMP---AHLLRVLEEETFEVRVL--E---------  161 (273)
T ss_dssp             SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEHHHHHHHSC---HHHHHHHHHSCEEEEEC------------
T ss_pred             cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhHHHHHHhCC---HHHHHHHhhcEEEEech--h---------
Confidence            5788999999999999999999999999  999999999999999999   67788888766555211  0         


Q ss_pred             CCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeee-------cc-chhccccccCCCC
Q 020626          186 RGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFN-------SI-VMAYTCWKDTQND  257 (323)
Q Consensus       186 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~-------~~-~~~~~~~~~~~~~  257 (323)
                      .+|+..++.                     +     ....||+ ++||+||+++||+       +. +..++.+      
T Consensus       162 ~~~~~~~~~---------------------~-----~~~~~Pv-~~hp~tG~~~l~~~r~~~~~~~~~~~~i~~------  208 (273)
T 1nx8_A          162 RGYYVDVSP---------------------D-----GWFKVPV-FTDLGWVRKMLIYFPFDEGQPASWEPRIVG------  208 (273)
T ss_dssp             -------------------------------------CEECCS-EEECSSCEEECCBCCCCTTSCCSEEEEETT------
T ss_pred             cccccCCCc---------------------c-----cccCCCC-ccCCCCCceeEEeeeeccccCccccccCCC------
Confidence            012110000                     0     0235899 9999999999876       43 3222211      


Q ss_pred             CCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC--Cceeeeccc
Q 020626          258 PVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR--PRHILASLC  322 (323)
Q Consensus       258 ~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g--~Rr~l~~~~  322 (323)
                              ...+.++++|+.|.+.+  ++++++|+|++||+|||||++++|||++|++  .+|+|.+++
T Consensus       209 --------~~~~e~~~~l~~l~~~~~~~~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R~~  269 (273)
T 1nx8_A          209 --------FTDHETQAFFQELGAFLKQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQ  269 (273)
T ss_dssp             --------CCHHHHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEEEE
T ss_pred             --------CCHHHHHHHHHHHHHHhcCCceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEEee
Confidence                    11234567888888877  7899999999999999999999999999975  577777654

>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A

Probab=100.00  E-value=7.8e-37  Score=287.17  Aligned_cols=228  Identities=20%  Similarity=0.253  Sum_probs=163.5

Q ss_pred             hHHHHH--HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCCCCCCCCccc
Q 020626           35 FLTETI--RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPF  112 (323)
Q Consensus        35 ~l~~~~--~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~  112 (323)
                      ++.+++  ++...+|.++|.+||||+||||++ +++++.+|+++||.+..++.|...   .+.......+..+.+..+.|
T Consensus       127 ~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~-~~~~~~~~a~~~G~l~~~~~g~~~---~v~~~~~~~~~~yt~~~l~~  202 (388)
T 3o2g_A          127 DFEDVLRYDEHAYKWLSTLKKVGIVRLTGASD-KPGEVSKLGKRMGFLYLTFYGHTW---QVQDKIDANNVAYTTGKLSF  202 (388)
T ss_dssp             EHHHHHHCHHHHHHHHHHHHHHSEEEEECCCS-STTHHHHHHHHHSCCCCBTTBSSE---EESCCTTCSSGGGSSSCEEE
T ss_pred             CHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCC-CHHHHHHHHHHhCCCccccCCCce---EEeecCCcCcccCccCCccc
Confidence            456665  356788899999999999999999 799999999999987654444211   11110001122234567899


Q ss_pred             cCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccccc
Q 020626          113 HQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIF  192 (323)
Q Consensus       113 HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f  192 (323)
                      |||++|.+.||++++|+|+++|..||+|+|+|+.+||+.|+++.|+.++.|....+.|......                
T Consensus       203 HtD~sy~~~pp~~~~L~c~~~~~~GG~T~~~d~~~a~~~L~~~~p~~~~~L~~~~~~~~~~~~~----------------  266 (388)
T 3o2g_A          203 HTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVD----------------  266 (388)
T ss_dssp             ECSCTTSSSCCSEEEEEEEECCSSSCCEEEEEHHHHHHHHHHHCHHHHHHHTTCEEEEEEEEES----------------
T ss_pred             ccCCCccCCCCcEEEEEEEecCCCCCcCeeecHHHHHHHhhhhCHHHHHHHhcCCcccEEecCC----------------
Confidence            9999999999999999999999999999999999999999999999999999765555321100                


Q ss_pred             ccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCc-eee-eeccchhccccccCCCCCCcceecCCCCCC
Q 020626          193 LTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQR-KIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPY  270 (323)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~-~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~~~  270 (323)
                                             ... ..+...||+|++||. |+ +.+ ||......+.              +.....
T Consensus       267 -----------------------~~~-~~~~~~~Pvv~~hp~-g~~~~l~~~~~~~~~i~--------------~l~~~~  307 (388)
T 3o2g_A          267 -----------------------YCD-FSVQSKHKIIELDDK-GQVVRINFNNATRDTIF--------------DVPVER  307 (388)
T ss_dssp             -----------------------SSE-EEEEEEEESEEECTT-SCEEEECCCTTTBCSCC--------------CSCHHH
T ss_pred             -----------------------CCC-cceeeccCEEEEcCC-CCEEEEEeCcccccccC--------------CCCHHH
Confidence                                   001 234567999999995 55 444 3432211111              100011


Q ss_pred             CH---HHHHHHHHHHH--HhcccccccCCCEEEEecccccccCCCCCC---Cceeeecc
Q 020626          271 PE---DIVYNLMKILE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR---PRHILASL  321 (323)
Q Consensus       271 ~~---~~l~~l~~~~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g---~Rr~l~~~  321 (323)
                      .+   ++|+.|.+.+.  +++++|+|+|||++||||+++||||++|++   .+|+|.+.
T Consensus       308 ~~~~~~al~~l~~~~~~p~~~~~~~~~pGd~vi~DNr~~lH~R~~f~~~~~~~R~L~r~  366 (388)
T 3o2g_A          308 VQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISRHLEGA  366 (388)
T ss_dssp             HHHHHHHHHHHHHHHHSTTTCEEECCCTTCEEEEETTTEEEEECCCCCCSSCSCEEEEE
T ss_pred             HHHHHHHHHHHHHHhcChhhEEEEEcCCCcEEEEeCcEEeeCCCCcCCCCCCCEEEEEE
Confidence            12   46777777664  789999999999999999999999999973   35555543

>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*

Probab=99.97  E-value=2.1e-31  Score=248.04  Aligned_cols=215  Identities=15%  Similarity=0.188  Sum_probs=146.5

Q ss_pred             hhHHHHHHHHh---hccEEEEecCCCCChhH---------------------HHHHHHHhCCCCCCCccCCCCceeecCc
Q 020626           42 TQKPFLESLLL---KAGAVLLRGFDVKTAND---------------------FNDVVEAFGYEELPYVGGAAPRSHVVGR   97 (323)
Q Consensus        42 ~~~~~l~~~l~---~~Gvvl~rg~~~~~~e~---------------------~~~~~~~~G~~~~~~~g~~~~r~~~~~~   97 (323)
                      +..++|++++.   ++||++|||+++ +.++                     +..|++.||... .+.....  .....+
T Consensus        82 ~l~~~L~~~~~~~~~~Gvl~~rg~p~-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~~--~~~~~~  157 (357)
T 2og5_A           82 TLRRDLAGFRRDSGPDGAIVLRGLPV-DSMGLPPTPRVNGSVQREASLGAAVLLMTACGLGDPG-AFLPEKN--GALVQD  157 (357)
T ss_dssp             HHHHHHHHHHHCCTTTTEEEEECCCC-CTTTCCSCCCSTTCBCCSCCHHHHHHHHHHHHHSEEE-EETTSGG--GCSSEE
T ss_pred             HHHHHHHHHHhcCCCCcEEEEcCCCC-chhhcCCCCCCccccccccchHHHHHHHHHHhhCCcc-cccccCC--CceEEE
Confidence            45778888877   599999999998 5444                     457888888642 2110000  000011


Q ss_pred             eeec------CCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHH-HHHHHhhhhChHHHHHHHhCCeEE
Q 020626           98 VFTA------NESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSH-IVYERMKESYPEFVQQLEQDGLIY  170 (323)
Q Consensus        98 v~~~------~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~-~a~~~L~~~~pe~~~~L~~~~~~~  170 (323)
                      |+..      +.......+.||||++|.+.||++++|+|+++|..||+|+|+|+. ++|+.|+   |++++.|++..  |
T Consensus       158 V~~~~~~~~~~~~~~~~~l~~HtD~sy~~~pP~~~~L~cl~~~~~GG~t~~~~~~~~al~~l~---p~~~~~L~~~~--~  232 (357)
T 2og5_A          158 VVPVPGMEEFQGNAGSTLLTFHNENAFHEHRPDFVMLLCLRADPTGRAGLRTACVRRVLPLLS---DSTVDALWAPE--F  232 (357)
T ss_dssp             ECCCTTCTTCSSTTCCSCEEEECTTTTCTTCCSEEEEEEEECCTTSCCCEEEEEHHHHGGGSC---HHHHHHHTSSC--E
T ss_pred             EeeCCCcccccccccCccccccccCCCCCCCCCeEEEEEEccCCCCCccEEEeeHHHHHHhCC---HHHHHHHcCCC--e
Confidence            2211      111223678899999999999999999999999999999998865 7777777   99999999643  3


Q ss_pred             EEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccc
Q 020626          171 TRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTC  250 (323)
Q Consensus       171 ~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~  250 (323)
                      .....          .+|..    ..                  .      ....||+|..||. |+.++||.....   
T Consensus       233 ~~~~~----------~~~~~----~~------------------~------~~~~~pvv~~~~~-g~~l~~~~~~~~---  270 (357)
T 2og5_A          233 RTAPP----------PSFQL----SG------------------P------EEAPAPVLLGDRS-DPDLRVDLAATE---  270 (357)
T ss_dssp             ECCCC----------GGGC----------------------------------CCBCSEEECSS-SEEECCBTTTCE---
T ss_pred             EecCC----------ccccc----cc------------------C------CCCcceEEEeCCC-CCeEEEchhhcC---
Confidence            21110          11110    00                  0      0235899999998 755556643211   


Q ss_pred             cccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCC----CCceeeeccc
Q 020626          251 WKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS----RPRHILASLC  322 (323)
Q Consensus       251 ~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~----g~Rr~l~~~~  322 (323)
                                     ..++.+.++|+.|.+.+.+.+++|+|++||||||||+++||||++|+    +.+|+|.+++
T Consensus       271 ---------------~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDivi~DN~~vlH~R~~f~d~~~~~~R~L~R~~  331 (357)
T 2og5_A          271 ---------------PVTERAAEALRELQAHFDATAVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQRTF  331 (357)
T ss_dssp             ---------------ESSHHHHHHHHHHHHHHHHHCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCSCEEEEEE
T ss_pred             ---------------CCCHHHHHHHHHHHHHHhhceEEEeeCCCCEEEEeCCccccCCCCCCCCCCCCCcEEEEEE
Confidence                           11245678888998888778999999999999999999999999995    3466665543

>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*

Probab=99.97  E-value=8.3e-31  Score=241.06  Aligned_cols=215  Identities=18%  Similarity=0.193  Sum_probs=143.1

Q ss_pred             HHHHHHHHhhccEEEEecCCCCCh----------------------hHHHHHHHHhCCCCCCCccCCCCceeecCceeec
Q 020626           44 KPFLESLLLKAGAVLLRGFDVKTA----------------------NDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTA  101 (323)
Q Consensus        44 ~~~l~~~l~~~Gvvl~rg~~~~~~----------------------e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~  101 (323)
                      ...|++.+.++|+++|||++++..                      ..+..++..+|... .|....  ......+|++.
T Consensus        50 l~~i~~~~~~~G~~llrG~p~~~~~~~~~Tp~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~~~~--~~~~~~~V~~~  126 (324)
T 1ds1_A           50 LDTFNAEGSEDGHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHT-GYRELR--SGTVYHDVYPS  126 (324)
T ss_dssp             HHHHHHHCCTTSEEEEESCCCCCGGGSCCCCCSSSCCTTCCCCHHHHHHHHHHHHHCEEE-EETTSG--GGCSSEEECCC
T ss_pred             HHHHhccCCCCCEEEEcCCCCCccccCCCCCCCccccccccccHHHHHHHHHHHhcCCcc-cccccC--CCcEEEEEEEC
Confidence            444555566999999999998421                      23445577777531 111000  00011123222


Q ss_pred             C------CCCCCCCccccCCCCCCCCCCcEEEeecccCCCC-CCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEe
Q 020626          102 N------ESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVS-GGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIY  174 (323)
Q Consensus       102 ~------~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~-GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~  174 (323)
                      .      ..+++..+.||||++|.+.||++++|+|+++|.. ||+|.|+|+++||+.|+   |++++.|.+.  .+...+
T Consensus       127 ~~~~~~~~~~t~~~l~~HtD~sy~~~pP~~~~L~c~~~~~~GGg~T~~~~~~~a~~~L~---~~~~~~l~~~--~~~~~~  201 (324)
T 1ds1_A          127 PGAHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKALPLLD---ERTRARLLDR--RMPCCV  201 (324)
T ss_dssp             TTCCTTSTTCCSSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHHHHGGGSC---HHHHHHHBTC--CEEECC
T ss_pred             CCCcccccccccCcccccccCCCCCCCCCeEEEEEeecCccCCceEEEeeHHHHHHhCC---HHHHHHHhcc--CccccC
Confidence            1      1355678999999999999999999999999998 89999999999999999   8888888753  232211


Q ss_pred             cCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhcccccc
Q 020626          175 QEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKD  253 (323)
Q Consensus       175 ~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~  253 (323)
                                    ...|..                      +. ......||+|..+...+.+.+ |+....       
T Consensus       202 --------------~~~~~~----------------------~~-~~~~~~hPvv~~~g~~~~~~~~~~~~~~-------  237 (324)
T 1ds1_A          202 --------------DVAFRG----------------------GV-DDPGAIAQVKPLYGDADDPFLGYDRELL-------  237 (324)
T ss_dssp             --------------CGGGCC----------------------CC-CSGGGSEEECSEESCTTSCEECCBTTTB-------
T ss_pred             --------------Chhhcc----------------------CC-cCccccCCeEEEeCCCCCceEEECCccC-------
Confidence                          111110                      00 001235787766665555444 332110       


Q ss_pred             CCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCC----Cceeeecc
Q 020626          254 TQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSR----PRHILASL  321 (323)
Q Consensus       254 ~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g----~Rr~l~~~  321 (323)
                                 ...++.+.++|+.|.+++.+++++|+|++||||||||+++||||++|++    .+|+|.++
T Consensus       238 -----------~~~~~~~~~al~~l~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~  298 (324)
T 1ds1_A          238 -----------APEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRV  298 (324)
T ss_dssp             -----------CCCSHHHHHHHHHHHHHHHHTCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHhccEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEE
Confidence                       0123456789999998888999999999999999999999999999975    35666554

>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*

Probab=99.96  E-value=2e-30  Score=241.67  Aligned_cols=229  Identities=17%  Similarity=0.157  Sum_probs=143.3

Q ss_pred             HHHHHHHhhc------cEEEEecCCCCChhH----------------------HHHHHHHhCCCCCCCccCCCCceeecC
Q 020626           45 PFLESLLLKA------GAVLLRGFDVKTAND----------------------FNDVVEAFGYEELPYVGGAAPRSHVVG   96 (323)
Q Consensus        45 ~~l~~~l~~~------Gvvl~rg~~~~~~e~----------------------~~~~~~~~G~~~~~~~g~~~~r~~~~~   96 (323)
                      +.|+++|.++      |+++|||+++ +.++                      +..++..+|... .|....  ...+..
T Consensus        69 ~~l~~~L~~~~~~~~~G~ll~RGl~v-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~--~g~~~~  144 (358)
T 2wbq_A           69 KRLRTFMARARLDAWPHALVVRGNPV-DDAALGSTPVHWRTARTPGSRPLSFLLMLYAGLLGDVF-GWATQQ--DGRVVT  144 (358)
T ss_dssp             HHHHHHHHHHTTCSSCSEEEEECCCC-CHHHHCSCCSSSTTCCCGGGHHHHHHHHHHHHTTCEEE-EETTSG--GGCSSE
T ss_pred             HHHHHHHHHhhcCCCCCEEEEeCCCc-chhhcCCCCCCCccccccccchHHHHHHHHHHhcCCce-EEeecC--CCCEEE
Confidence            4677777777      9999999998 4432                      345556666531 121100  111112


Q ss_pred             ceeecC-------CCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeE
Q 020626           97 RVFTAN-------ESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLI  169 (323)
Q Consensus        97 ~v~~~~-------~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~  169 (323)
                      +|+...       ..+++..+.||||++|.+.||++++|+|+++|. ||+|.|||+..+  .|+   |++++.|++..  
T Consensus       145 ~V~~~~~~~~~~~~~~t~~~l~~HtD~sy~~~pp~~~~L~cl~~p~-gG~T~~ad~~~~--~l~---p~~~~~L~~~~--  216 (358)
T 2wbq_A          145 DVLPIKGGEHTLVSSSSRQELGWHTEDAFSPYRADYVGLLSLRNPD-GVATTLAGVPLD--DLD---ERTLDVLFQER--  216 (358)
T ss_dssp             EECCCTTCTTSSSTTCCSSCEEEECTTTTCTTCCSEEEEEEEECTT-CCEEEEEECCTT--TCC---HHHHHHHTSSC--
T ss_pred             eeeeCCCCccccccCCCCCCccccccCCCCCCCCCeEEEEeEecCC-CCCceEEechhh--hCC---HHHHHHHhCCC--
Confidence            233221       123445789999999999999999999999999 999999998864  666   99999999644  


Q ss_pred             EEEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhcc
Q 020626          170 YTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYT  249 (323)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~  249 (323)
                      |.+.....       ...+...+...+..+.+...       +|..++      ..||++..||  |++.++.+.....+
T Consensus       217 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~hpvv~~~~--~~~~l~~~~~~~~~  274 (358)
T 2wbq_A          217 FLIRPDDS-------HLQVNNSTAQQGRVEFEGIA-------QAADRP------EPVAILTGHR--AAPHLRVDGDFSAP  274 (358)
T ss_dssp             EECCCCGG-------GSGGGCC-----CTHHHHHH-------HHHHSC------CCBCSEEEET--TEEEECCBTTTCEE
T ss_pred             eEEcCCcc-------cccccccccccchhhhhhhh-------hhccCC------CcceeeeCCC--CCCcEEECcccccc
Confidence            33221100       00111111111111111000       111222      2589998887  77776432211111


Q ss_pred             ccccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCC----CCceeeeccc
Q 020626          250 CWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS----RPRHILASLC  322 (323)
Q Consensus       250 ~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~----g~Rr~l~~~~  322 (323)
                                     ...++.+.++|+.|.+.+.+++++|+|++|||+||||+++||+|++|+    +.+|+|.+++
T Consensus       275 ---------------~~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDv~i~DNr~vlH~R~~f~~~~~~~~R~L~R~~  336 (358)
T 2wbq_A          275 ---------------AEGDEEAAAALGTLRKLIDASLYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLKRIN  336 (358)
T ss_dssp             ---------------STTCHHHHHHHHHHHHHHHHHCEEEECCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEE
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHHhhceEEeecCCCEEEEeCcccccCCCCCCCCCCCCCceEEEEE
Confidence                           122356678999999888889999999999999999999999999995    4466666553

>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*

Probab=99.90  E-value=3.9e-24  Score=191.25  Aligned_cols=202  Identities=17%  Similarity=0.233  Sum_probs=133.4

Q ss_pred             HHHHHHHHhh--ccEEEEecCCC---CChhHHHHHHHHhCCC-CCCC----ccCCCCceeecCceeecCCC---CCCCCc
Q 020626           44 KPFLESLLLK--AGAVLLRGFDV---KTANDFNDVVEAFGYE-ELPY----VGGAAPRSHVVGRVFTANES---SLDRNI  110 (323)
Q Consensus        44 ~~~l~~~l~~--~Gvvl~rg~~~---~~~e~~~~~~~~~G~~-~~~~----~g~~~~r~~~~~~v~~~~~~---~~~~~~  110 (323)
                      .+++...+..  +|++++.+.++   .+.+++.+++++||.+ ..+.    .|..-.+-.+.... .++..   +-+ .+
T Consensus        66 ~~~l~~i~~~r~~G~~~i~~~~~~~~~~~~~~~~l~~riG~i~r~t~~D~~yG~~~a~f~V~~~~-~~~~~l~~AYT-~L  143 (311)
T 1jr7_A           66 QPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVD-NSDSYLRQPHR-VM  143 (311)
T ss_dssp             HHHHHHHHHCTTCCEEEEEETTCCSGGGHHHHHHHHHHHHHHHEEECCBTTTTBSSEEEEECCC------CTTCTTC-CE
T ss_pred             HHHHHHHHHHhceeEEEEEccCCCCCCCHHHHHHHHHHheeccccCCcccCCCceEeeEEEEecC-Cccccchhhcc-CC
Confidence            4555555543  89888877763   3678899999999987 4443    34221111111111 11111   112 89


Q ss_pred             cccCCCCCCCCCCcEEEee-cccCCCCCCCcccccHHHHHHHhhhhChHHHHH-----HHhCCeEEEEEecCCCCCCCCC
Q 020626          111 PFHQEMALLPQFPSKLFFF-CEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQ-----LEQDGLIYTRIYQEKDDLTSPT  184 (323)
Q Consensus       111 ~~HtD~sy~~~pP~~~~L~-c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~-----L~~~~~~~~~~~~~~~~~~~~~  184 (323)
                      +||||++|.+.+|++++|+ |++.+.+||+|.|         |.+++||.++.     |.+..+.|..  +.+       
T Consensus       144 ~lHTDg~Y~~~~pg~qlLH~Cl~~~~~GGeS~l---------Lr~~dPe~f~~~~~~~L~~~~v~~~~--~~~-------  205 (311)
T 1jr7_A          144 ELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLL---------LHLDDWEHLDNYFRHPLARRPMRFAA--PPS-------  205 (311)
T ss_dssp             EEECSCTTSSSCCCEEEEEEEEEESCCBCCEEE---------EEGGGCTTHHHHHTSGGGGSCEEECC--SSC-------
T ss_pred             CcccCCCCCCCCccHHHHHHHHhccCCCceeee---------chhhCHHHHhcccccCceeceEEeec--cCC-------
Confidence            9999999999999999999 9999999999999         99999999999     8877766641  010       


Q ss_pred             CCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCccee
Q 020626          185 GRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVT  263 (323)
Q Consensus       185 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~  263 (323)
                                                     ++  ......+|+|..++. |+..+ ||....                 
T Consensus       206 -------------------------------~~--~~~~~~~PVi~ld~~-G~l~IRyn~~~r-----------------  234 (311)
T 1jr7_A          206 -------------------------------KN--VSKDVFHPVFDVDQQ-GRPVMRYIDQFV-----------------  234 (311)
T ss_dssp             -------------------------------TT--CCCCEEECSEEECTT-SCEEECCCTTTE-----------------
T ss_pred             -------------------------------Cc--eeeEeecCEEEECCC-CCEEEEeCCCCC-----------------
Confidence                                           00  112345799998875 77653 332110                 


Q ss_pred             cCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC---CC-cee
Q 020626          264 FGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS---RP-RHI  317 (323)
Q Consensus       264 ~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~---g~-Rr~  317 (323)
                       ..........+..+.+.+  +++++.|+|+|||+||+||+++||||++|+   |. |++
T Consensus       235 -~p~~~~~~~Yl~~f~~~l~dp~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L  293 (311)
T 1jr7_A          235 -QPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL  293 (311)
T ss_dssp             -ECCSHHHHHHHHHHHHHHHTCTTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEE
T ss_pred             -CCHHHHHHHHHHHHHHHhcCcccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEE
Confidence             000111122355555543  468999999999999999999999999997   44 555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	323
d1y0za_	327	b.82.2.8 (A:) Clavaminate synthase-like protein At	3e-82
d1ds1a_	323	b.82.2.2 (A:) Clavaminate synthase {Streptomyces c	5e-17
d1nx4a_	271	b.82.2.8 (A:) Carbapenem synthase, CarC {Erwinia c	4e-16

>d1y0za_ b.82.2.8 (A:) Clavaminate synthase-like protein At3g21360 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 327

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: gamma-Butyrobetaine hydroxylase
domain: Clavaminate synthase-like protein At3g21360
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  250 bits (638), Expect = 3e-82
 Identities = 209/323 (64%), Positives = 259/323 (80%), Gaps = 6/323 (1%)

Query: 7   EIKLAEQKSYNSIPFPWVLTPNS------TTNLSFLTETIRTQKPFLESLLLKAGAVLLR 60
           E  + +QK Y S PFP V++P S        +L   T+TI+TQK +L+SLL ++GAVL R
Sbjct: 5   ETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVLFR 64

Query: 61  GFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLP 120
           GF V +A+DFNDVVEAFG++ELPYVGGAAPR+ VVGRVFTANES  D+ IPFH EMA + 
Sbjct: 65  GFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVR 124

Query: 121 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 180
           +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E DD 
Sbjct: 125 EFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDP 184

Query: 181 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW 240
           +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK+W
Sbjct: 185 SSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVW 244

Query: 241 FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 300
           FNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLLID
Sbjct: 245 FNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLID 304

Query: 301 NLAVLHARRSSSRPRHILASLCK 323
           N AVLH+RR    PR +LASLCK
Sbjct: 305 NWAVLHSRRPFDPPRRVLASLCK 327

>d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 323

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Clavaminate synthase
domain: Clavaminate synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 78.3 bits (192), Expect = 5e-17
 Identities = 38/294 (12%), Positives = 68/294 (23%), Gaps = 88/294 (29%)

Query: 55  GAVLLRGFDVKTANDFNDVVEAFGYEE-----------------LPYVGGAAPRSH---- 93
           G +LLRG  V+   D      +    E                 L    G          
Sbjct: 60  GHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHTGYRELRSGTVY 119

Query: 94  ----VVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVY 149
                       +  + +  + FH EMA     P+ +   C           LV S    
Sbjct: 120 HDVYPSPGAHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKA 179

Query: 150 ERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGL 209
             + +       +L    +                                         
Sbjct: 180 LPLLD--ERTRARLLDRRMPCCVDV----------------------------------- 202

Query: 210 KLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSP 269
              +         +  +  +  D      + ++                          P
Sbjct: 203 --AFRGGVDDPGAIAQVKPLYGDADDPF-LGYDR------------------ELLAPEDP 241

Query: 270 YPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRS-----SSRPRHIL 318
             ++ V  L K L+E   A+  + GD+L++DN    HAR         + R + 
Sbjct: 242 ADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLH 295

>d1nx4a_ b.82.2.8 (A:) Carbapenem synthase, CarC {Erwinia carotovora [TaxId: 554]} Length = 271

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: gamma-Butyrobetaine hydroxylase
domain: Carbapenem synthase, CarC
species: Erwinia carotovora [TaxId: 554]

 Score = 74.8 bits (183), Expect = 4e-16
 Identities = 35/287 (12%), Positives = 84/287 (29%), Gaps = 55/287 (19%)

Query: 40  IRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVF 99
           +  +   +++LL++ G V+++  D+  ++ F D+  A+G                   + 
Sbjct: 24  LEAKTETIKNLLMRQGFVVVKNLDI-DSDTFRDIYSAYGTIVEYADEKIGVGFGYRDTLK 82

Query: 100 TANESS----LDRNIPFHQEMALLPQFPSKLFFFCEVEPVS--GGDTPLVLSHIVYERMK 153
              E          +PFH +  LL     ++F +          G T +    +  + M 
Sbjct: 83  LEGEKGKIVTGRGQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMP 142

Query: 154 ESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEW 213
                 +     +   +     E+      +  GW  + +  D     +           
Sbjct: 143 AHLLRVL-----EEETFEVRVLERGYYVDVSPDGWFKVPVFTDLGWVRK----------- 186

Query: 214 MEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPED 273
                          + +     +   +   ++    + D +                  
Sbjct: 187 -------------MLIYFPFDEGQPASWEPRIVG---FTDHETQAFF------------Q 218

Query: 274 IVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRS---SSRPRHI 317
            +   +K          W++GD+L++DN  V+H R         R +
Sbjct: 219 ELGAFLKQ-PRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRL 264

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	323
d1y0za_	327	Clavaminate synthase-like protein At3g21360 {Thale	100.0
d1oiha_	288	Putative alkylsulfatase AtsK {Pseudomonas putida [	100.0
d1otja_	281	Taurine/alpha-ketoglutarate dioxygenase TauD {Esch	100.0
d1nx4a_	271	Carbapenem synthase, CarC {Erwinia carotovora [Tax	100.0
d1ds1a_	323	Clavaminate synthase {Streptomyces clavuligerus [T	99.96
d1jr7a_	311	Gab protein (hypothetical protein YgaT) {Escherich	99.78

>d1y0za_ b.82.2.8 (A:) Clavaminate synthase-like protein At3g21360 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: gamma-Butyrobetaine hydroxylase
domain: Clavaminate synthase-like protein At3g21360
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.8e-66  Score=474.25  Aligned_cols=319  Identities=66%  Similarity=1.156  Sum_probs=292.2

Q ss_pred             cccccccccccCCCCCCceEEecCCC------CChhhHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhC
Q 020626            5 FAEIKLAEQKSYNSIPFPWVLTPNST------TNLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFG   78 (323)
Q Consensus         5 ~~~~~~~~~~~~~~~~~p~~~~~~~~------~~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G   78 (323)
                      +-+-++..++.+++.+||++|+|.++      .+.+.+.++..+++++|+++|.+||||+||||+++++++|.+|++.||
T Consensus         3 ~~~~~~~~~~~~~~~~~p~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~GvvlfRg~~l~~~~~f~~f~~~fG   82 (327)
T d1y0za_           3 LVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVLFRGFPVNSADDFNDVVEAFG   82 (327)
T ss_dssp             CEECCCSSCEEETTEEESEEEECC------CCCCHHHHHHHHHHTHHHHHHHHHHHSEEEECSSCCCSHHHHHHHHHHHC
T ss_pred             cccCCCCchhccCCCCCCeEEecCCCCCCccccChhhhhHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHhC
Confidence            34567889999999999999999874      267778889999999999999999999999999977899999999999


Q ss_pred             CCCCCCccCCCCceeecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChH
Q 020626           79 YEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPE  158 (323)
Q Consensus        79 ~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe  158 (323)
                      ....+|.++..+|..+.++|+++++.|....+.||+|++|.+.||.+++|||+++|..||+|.|||+++||+.|+++.|+
T Consensus        83 ~~~~~~~~~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~l~c~~~p~~GGeT~f~d~~~ay~~L~~~~~~  162 (327)
T d1y0za_          83 FDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPE  162 (327)
T ss_dssp             CCBCCCCSSSCCEEEEETTEEEECCSCTTSCEEEECTTTTSSSCCSEEEEEEEECCSEECCCCEEEHHHHHHHHHHHCHH
T ss_pred             CcccCccCCCCCccccCCceecCCCCCCccceecccCCccccCCCceEEEEeeecCCCCCCCEEEeHHHHHHhcChhchh
Confidence            87788888788899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCce
Q 020626          159 FVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRK  238 (323)
Q Consensus       159 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~  238 (323)
                      +++.|+..++.|.+++....++....+.+|+..|++++..+++.+++..++.++|..++........||+|++||.||++
T Consensus       163 ~~~~l~~~~v~y~~~~~~~~~~~~~~~~~~~~~f~t~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~p~v~~hP~tg~k  242 (327)
T d1y0za_         163 FVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRK  242 (327)
T ss_dssp             HHHHHHHHCEEEEEEECSSBCTTSTTCCCHHHHTTCSCHHHHHHHHHHTTCEEEECTTSCEEEEEEEECSCEEETTTTEE
T ss_pred             hhhhceecceeeEeecccccccccccccchhhhcccccHHHHHHHhhhccccccccccccccceeeccccEEeCCCCccc
Confidence            99999999999999987766666667789999999999999999999999999999998756667789999999999999


Q ss_pred             eeeeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCCCceee
Q 020626          239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHIL  318 (323)
Q Consensus       239 ~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g~Rr~l  318 (323)
                      +|||+....+..+.......+..++||||+++++++++++.+++++++|+|+||+||||||||+++||||++|+|+||++
T Consensus       243 ~~f~~~~~~~~~~~~~~~~~~~~~~fgDG~~i~~~ll~~i~~~~~~~~~~~~Wq~GDlvi~DN~~~lHgR~~f~g~Rrv~  322 (327)
T d1y0za_         243 VWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVL  322 (327)
T ss_dssp             ECCSCHHHHHHHCCBTTBCGGGTEEETTSCCCCHHHHHHHHHHHHHHCBCCCCCTTCEEEEETTTEEEEECCEESCCEEE
T ss_pred             eeeccceeEEeecccccccchhhccccCCccchHHHHHHHHHhCcceEEEeecCCCCEEEEecchhhhCCCCCCCCceEE
Confidence            99999887777777666666788999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccC
Q 020626          319 ASLCK  323 (323)
Q Consensus       319 ~~~~~  323 (323)
                      ++|++
T Consensus       323 ~~l~~  327 (327)
T d1y0za_         323 ASLCK  327 (327)
T ss_dssp             EEEEC
T ss_pred             EEecC
Confidence            99975

>d1oiha_ b.82.2.5 (A:) Putative alkylsulfatase AtsK {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: TauD/TfdA-like
domain: Putative alkylsulfatase AtsK
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=1.9e-41  Score=305.04  Aligned_cols=238  Identities=14%  Similarity=0.137  Sum_probs=162.0

Q ss_pred             HHhhHHHHHHHHhhccEEEEecCC-CCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCCCCCCCCccccCCCCC
Q 020626           40 IRTQKPFLESLLLKAGAVLLRGFD-VKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMAL  118 (323)
Q Consensus        40 ~~~~~~~l~~~l~~~Gvvl~rg~~-~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy  118 (323)
                      .++..++|+++|.+||||+||||. + +++++.+|++.||.+..........   ....+...+.........||+|++|
T Consensus        26 ~~~~~~~i~~al~~~~vlvfr~Q~~l-~~e~~~~fa~~fG~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~WHtD~s~  101 (288)
T d1oiha_          26 DAATVEAIQAALVRHKVIFFRGQTHL-DDQSQEGFAKLLGEPVAHPTVPVVD---GTRYLLQLDGAQGQRANSWHTDVTF  101 (288)
T ss_dssp             CHHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHTTSCBCC----CCCT---TCSSCEEEC-----CCCSCBCTTTT
T ss_pred             CHHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHhcCcccccccccccc---ccccccccccccccccccccccccc
Confidence            456789999999999999999996 6 8999999999999864321111110   1112333344444566789999999


Q ss_pred             CCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChH
Q 020626          119 LPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKS  198 (323)
Q Consensus       119 ~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~  198 (323)
                      .+.||.+++|||+++|+.||+|.|||+.+||+.|+   ++++++|+++.+.+...+..            .......+..
T Consensus       102 ~~~pp~~t~L~~~~~p~~GG~T~f~d~~~aye~L~---~~~k~~l~~l~~~hs~~~~~------------~~~~~~~~~~  166 (288)
T d1oiha_         102 VEAYPKASILRSVVAPASGGDTVWANTAAAYQELP---EPLRELADKLWAVHSNEYDY------------ASLKPDIDPA  166 (288)
T ss_dssp             SSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHHHCEEEEECC-------------------------
T ss_pred             ccccccceeEEEEeccCccCccccccchhhhhhcc---ccccceeecceEEecchhhh------------hhhcCCCChh
Confidence            99999999999999999999999999999999999   89999999765544321110            0000000011


Q ss_pred             HHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCCCCHHHHHHH
Q 020626          199 LAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNL  278 (323)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l  278 (323)
                      ..+.          +........+...||+|++||.||++++|++.....+.+              .....+.++++.|
T Consensus       167 ~~~~----------~~~~~~~~~~~~~hplV~~hp~tg~~~ly~~~~~~~i~~--------------~~~~e~~~~l~~L  222 (288)
T d1oiha_         167 KLER----------HRKVFTSTVYETEHPVVRVHPISGERALQLGHFVKRIKG--------------YSLADSQHLFAVL  222 (288)
T ss_dssp             ----------------------CCEEEEESEEECTTTCCEEECCSTTEEEETT--------------SCHHHHHHHHHHH
T ss_pred             hhhh----------hccccccccccceeeEEEeeccccceeeecccccccccc--------------cchhhhhhHHHHH
Confidence            1110          000000012346799999999999999987654444322              2223456778877


Q ss_pred             HHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeec
Q 020626          279 MKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILAS  320 (323)
Q Consensus       279 ~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~  320 (323)
                      .+.+  ++++|+|+|++||||||||+++||+|++|.+ .+|+|.+
T Consensus       223 ~~~~~~~~~~y~h~W~~GDlviwDNr~vlH~a~~~~~~~~R~m~R  267 (288)
T d1oiha_         223 QGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRR  267 (288)
T ss_dssp             HHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEE
T ss_pred             HHHhCCcCeEEEEEecCCCEEEEeCCceeEecccCCCCCceEEEE
Confidence            7654  6799999999999999999999999999864 4555544

>d1otja_ b.82.2.5 (A:) Taurine/alpha-ketoglutarate dioxygenase TauD {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: TauD/TfdA-like
domain: Taurine/alpha-ketoglutarate dioxygenase TauD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-40  Score=293.73  Aligned_cols=253  Identities=17%  Similarity=0.175  Sum_probs=169.1

Q ss_pred             CCceEEecCCCCChhhHHH-HHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCc
Q 020626           20 PFPWVLTPNSTTNLSFLTE-TIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGR   97 (323)
Q Consensus        20 ~~p~~~~~~~~~~~~~l~~-~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~   97 (323)
                      .|...|+-..      |.+ ..++..++|.++|.+||||+||||++ |++++.+|+++||.... ++.. ......... 
T Consensus        12 ~~Ga~I~gvD------l~~~l~~~~~~~i~~~l~~~gvlvfr~q~l-s~~~~~~f~~~fG~~~~~~~~~-~~~~~~~~~-   82 (281)
T d1otja_          12 YIGAQISGAD------LTRPLSDNQFEQLYHAVLRHQVVFLRDQAI-TPQQQRALAQRFGELHIHPVYP-HAEGVDEII-   82 (281)
T ss_dssp             SSCEEEESCC------SSSCCCHHHHHHHHHHHHHHSEEEECSCCC-CHHHHHHHHHTTSCBCCCSSSC-EETTEEEEE-
T ss_pred             ceEEEEECcc------cCCcCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCccccCccc-cccccccee-
Confidence            4666666543      221 12346789999999999999999999 99999999999998642 2211 111111000 


Q ss_pred             eeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCC
Q 020626           98 VFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEK  177 (323)
Q Consensus        98 v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~  177 (323)
                      ..............||+|++|.+.||.+++|||+++|..||+|.|||+++||+.|+   +++++.+++..+.|  ++...
T Consensus        83 ~~~~~~~~~~~~~~wH~D~s~~~~P~~~~~l~~~~~p~~GG~T~f~d~~~ay~~L~---~~~k~~~~~l~~~h--~~~~~  157 (281)
T d1otja_          83 VLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALS---VPFRQLLSGLRAEH--DFRKS  157 (281)
T ss_dssp             EEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHTTCEEEE--CHHHH
T ss_pred             eecccccccccccccccccccccCcceeeEEEEEeeccCCCcceecchHHHHHhhc---hhhhcccceeEEEE--chhhh
Confidence            11111122233457999999999999999999999999999999999999999999   89999999654433  22110


Q ss_pred             CCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeecc-chhccccccCCC
Q 020626          178 DDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSI-VMAYTCWKDTQN  256 (323)
Q Consensus       178 ~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~-~~~~~~~~~~~~  256 (323)
                                ...........+........       .    ..+...||+|++||.||+++||.+. ....+.+     
T Consensus       158 ----------~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~hPlV~~hp~tg~k~l~~~~~~~~~i~g-----  211 (281)
T d1otja_         158 ----------FPEYKYRKTEEEHQRWREAV-------A----KNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVD-----  211 (281)
T ss_dssp             ----------SCGGGSCSSHHHHHHHHHHH-------H----HCCCEEEESEEECTTTCCEEECCCTTTEEEESS-----
T ss_pred             ----------cchhcccccchhhhccchhh-------h----cccceecceEEecCcCCccceecccccceeecc-----
Confidence                      00000011111111000000       0    1123579999999999999998653 3333322     


Q ss_pred             CCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC-CCceeeecc
Q 020626          257 DPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS-RPRHILASL  321 (323)
Q Consensus       257 ~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~-g~Rr~l~~~  321 (323)
                               .....+.++|+.|.+.+  ++++|+|+|++||||||||+++||+|++|. +.+|+|.+.
T Consensus       212 ---------~~~~e~~~~l~~l~~~~~~~~~~y~h~W~~GDlviwDN~~vlH~~~~~~~~~~R~m~R~  270 (281)
T d1otja_         212 ---------VSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRA  270 (281)
T ss_dssp             ---------SCHHHHHHHHHHHHHHTTCGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEE
T ss_pred             ---------CChhHHHHHHHHHHHHHcCCCEEEEEEEECCCEEEECCCceeECCcCCCCCCceEEEEE
Confidence                     22334567777777653  679999999999999999999999999874 456766553

>d1nx4a_ b.82.2.8 (A:) Carbapenem synthase, CarC {Erwinia carotovora [TaxId: 554]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: gamma-Butyrobetaine hydroxylase
domain: Carbapenem synthase, CarC
species: Erwinia carotovora [TaxId: 554]

Probab=100.00  E-value=5.6e-35  Score=260.21  Aligned_cols=238  Identities=15%  Similarity=0.184  Sum_probs=149.8

Q ss_pred             hHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeec----CCCCCCCCc
Q 020626           35 FLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTA----NESSLDRNI  110 (323)
Q Consensus        35 ~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~----~~~~~~~~~  110 (323)
                      +..++.....++|+++|.+||+++||||++ +.+++.+|+.+||.......+...........+...    ....+...+
T Consensus        19 ~~~d~~~~~~~~i~~~l~~~G~vv~r~~~l-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   97 (271)
T d1nx4a_          19 DHRDFLEAKTETIKNLLMRQGFVVVKNLDI-DSDTFRDIYSAYGTIVEYADEKIGVGFGYRDTLKLEGEKGKIVTGRGQL   97 (271)
T ss_dssp             CHHHHHHSCHHHHHHHHHHHCEEEECSCCC-CHHHHHHHHHTTSEECC------------CCSEEECCCTTCSSSSSSCE
T ss_pred             ECccccccCHHHHHHHHHHcCEEEECCCCC-CHHHHHHHHHHhCCccccccccCCCCCCCceEEEccCcccccccCCCCC
Confidence            344556667899999999999999999999 899999999999975321100000000000001111    112345678


Q ss_pred             cccCCCCCCCCCCcEEEeecccCC--CCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCc
Q 020626          111 PFHQEMALLPQFPSKLFFFCEVEP--VSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGW  188 (323)
Q Consensus       111 ~~HtD~sy~~~pP~~~~L~c~~~p--~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w  188 (323)
                      .||+|++|.+.||++++|||++.|  ..||+|.|||+.+||+.|+   +++++.++...+.+.......           
T Consensus        98 ~~HtD~~~~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~a~~~L~---~~~~~~~~~~~~~~~~~~~~~-----------  163 (271)
T d1nx4a_          98 PFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMP---AHLLRVLEEETFEVRVLERGY-----------  163 (271)
T ss_dssp             EEECSSSSSSCCCCEEEEEEEEEESCSSSSCEEEEEHHHHHHHSC---HHHHHHHHHSCEEEEEC---------------
T ss_pred             CcccCCCCCCCCCceEEEEEEecCCCCCCcceeeeeHHHHHHhcC---HHHHHHHhcCEEEEccccccc-----------
Confidence            999999999999999999999855  4699999999999999999   788888887766554221100           


Q ss_pred             ccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCC
Q 020626          189 KSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGS  268 (323)
Q Consensus       189 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~  268 (323)
                         +...+                       ......+|++..|+.+++++++...........       ..-..+...
T Consensus       164 ---~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~  210 (271)
T d1nx4a_         164 ---YVDVS-----------------------PDGWFKVPVFTDLGWVRKMLIYFPFDEGQPASW-------EPRIVGFTD  210 (271)
T ss_dssp             ----------------------------------CEECCSEEECSSCEEECCBCCCCTTSCCSE-------EEEETTCCH
T ss_pred             ---cccCC-----------------------ccceecCceeccCCCcccceEEECCCCceeccc-------ccccCCCCH
Confidence               00000                       001123444555555444443322111000000       000011122


Q ss_pred             CCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC--Cceeeec
Q 020626          269 PYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR--PRHILAS  320 (323)
Q Consensus       269 ~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g--~Rr~l~~  320 (323)
                      +.+.++++.|.+.+  ++++|+|+|++|||+||||++++|||++|++  .+|+|.|
T Consensus       211 ~e~~~~l~~l~~~~~~~~~~~~~~w~~GDili~DN~~vlH~R~~f~~~~~~R~L~R  266 (271)
T d1nx4a_         211 HETQAFFQELGAFLKQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYR  266 (271)
T ss_dssp             HHHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEEEecCCCEEEEecCeeeECCcccCCCCCcEEEEE
Confidence            23456777777654  5789999999999999999999999999964  4577665

>d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces clavuligerus [TaxId: 1901]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Clavaminate synthase
domain: Clavaminate synthase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=99.96  E-value=3.1e-29  Score=228.23  Aligned_cols=216  Identities=19%  Similarity=0.220  Sum_probs=136.1

Q ss_pred             HHHHHhhccEEEEecCCCCChh----------------------HHHHHHHHhCCCCCCCc----cCCCCceeecCceee
Q 020626           47 LESLLLKAGAVLLRGFDVKTAN----------------------DFNDVVEAFGYEELPYV----GGAAPRSHVVGRVFT  100 (323)
Q Consensus        47 l~~~l~~~Gvvl~rg~~~~~~e----------------------~~~~~~~~~G~~~~~~~----g~~~~r~~~~~~v~~  100 (323)
                      ++....++|++||||+|+.+.+                      .+..++..+|.. .+|.    |.........++..+
T Consensus        52 f~~~~~~~G~~llrGlpvd~~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-~~~~~~~~G~l~~~v~p~~~~~~  130 (323)
T d1ds1a_          52 FNAEGSEDGHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLH-TGYRELRSGTVYHDVYPSPGAHH  130 (323)
T ss_dssp             HHHHCCTTSEEEEESCCCCCGGGSCCCCCSSSCCTTCCCCHHHHHHHHHHHHHCEE-EEETTSGGGCSSEEECCCTTCCT
T ss_pred             HHHhcCCCcEEEECCCCcccccccCCCccccccccccchhHHHHHHHHHHhhcCCc-eeeecccCCceeeeccccCCccc
Confidence            3444578899999999984332                      244567777853 2221    111100111112223


Q ss_pred             cCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCC-cccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCC
Q 020626          101 ANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGD-TPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDD  179 (323)
Q Consensus       101 ~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGe-T~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~  179 (323)
                      .+...++..+.||||++|.+.||++++|+|+++|+.||+ |.++|++.+++.|+   |+.++.|.+..+.+....     
T Consensus       131 ~~~~~s~~~L~~HtD~ay~~~~Pd~v~L~Clr~~~~GG~st~v~~~~~~~~~L~---~~~~~~L~~~~~~~~~~~-----  202 (323)
T d1ds1a_         131 LSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKALPLLD---ERTRARLLDRRMPCCVDV-----  202 (323)
T ss_dssp             TSTTCCSSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHHHHGGGSC---HHHHHHHBTCCEEECCCG-----
T ss_pred             cccCCCCccccccccCCCCCCCCceeEEEEeeeCCCCCcceechhHHHHHHhCC---HHHHHHHHhCCEEecccc-----
Confidence            333456778999999999999999999999999988877 66778899999998   899999986443332111     


Q ss_pred             CCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCC
Q 020626          180 LTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPV  259 (323)
Q Consensus       180 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~  259 (323)
                                 .|.....                  ...   .....+. ..++..+..+.|+...              
T Consensus       203 -----------~~~~~~~------------------~~~---~~~~~~~-l~~~~~~~~~r~~~~~--------------  235 (323)
T d1ds1a_         203 -----------AFRGGVD------------------DPG---AIAQVKP-LYGDADDPFLGYDREL--------------  235 (323)
T ss_dssp             -----------GGCCCCC------------------SGG---GSEEECS-EESCTTSCEECCBTTT--------------
T ss_pred             -----------ccccCCC------------------ccc---ceeeeee-EeCCCCeEEEEecchh--------------
Confidence                       1110000                  000   0011121 2222222233343321              


Q ss_pred             cceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCC----Cceeeeccc
Q 020626          260 KAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSR----PRHILASLC  322 (323)
Q Consensus       260 ~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g----~Rr~l~~~~  322 (323)
                          ....++...++++.|.++++++++.|+|++|||+||||+++||||++|++    ..|+|.++|
T Consensus       236 ----~~~~~~~~~~al~~L~~~~~~~~~~~~l~pGDili~DN~rvlHgR~~F~~~~dg~dR~L~R~~  298 (323)
T d1ds1a_         236 ----LAPEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRVY  298 (323)
T ss_dssp             ----BCCCSHHHHHHHHHHHHHHHHTCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEE
T ss_pred             ----ccCCCHHHHHHHHHHHHHHHhheEEEecCCCCEEEEecCceeECCCCCCCCCCCCceEEEEEE
Confidence                11223455688889999889999999999999999999999999999963    456665554

>d1jr7a_ b.82.2.3 (A:) Gab protein (hypothetical protein YgaT) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Gab protein (hypothetical protein YgaT)
domain: Gab protein (hypothetical protein YgaT)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2.1e-19  Score=159.54  Aligned_cols=205  Identities=18%  Similarity=0.232  Sum_probs=120.8

Q ss_pred             HHHHHHHh--hccEEEEecCCCC---ChhHHHHHHHHhCC----CCC-CCccCCCCceeecCceeecCCC--CCCCCccc
Q 020626           45 PFLESLLL--KAGAVLLRGFDVK---TANDFNDVVEAFGY----EEL-PYVGGAAPRSHVVGRVFTANES--SLDRNIPF  112 (323)
Q Consensus        45 ~~l~~~l~--~~Gvvl~rg~~~~---~~e~~~~~~~~~G~----~~~-~~~g~~~~r~~~~~~v~~~~~~--~~~~~~~~  112 (323)
                      .-|.+.+.  .+|.+++.-..+.   +.+.+++|+.+++.    +.+ +..|....|-.+. +.-.++.+  .+...+.|
T Consensus        67 ~~l~~i~~dr~~g~~ii~~~~~~~~~~~~~~vkl~t~~~~~~g~pn~d~m~g~~~~~f~vk-~~d~sdsy~~~AytnL~l  145 (311)
T d1jr7a_          67 PLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVK-NVDNSDSYLRQPHRVMEL  145 (311)
T ss_dssp             HHHHHHHHCTTCCEEEEEETTCCSGGGHHHHHHHHHHHHHHHEEECCBTTTTBSSEEEEEC-CC-----CTTCTTCCEEE
T ss_pred             HHHHHHHhhccceeEEEecCCCCcchhhhHHHHHhhhhhhcccCCcccccccccceEEEee-cCCCchhhhhccccCccc
Confidence            34444443  5898999776652   33567777776643    222 1112111122221 11111111  12345889


Q ss_pred             cCCCCCCCCCCcEEEeeccc-CCCCCCCccc--ccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcc
Q 020626          113 HQEMALLPQFPSKLFFFCEV-EPVSGGDTPL--VLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWK  189 (323)
Q Consensus       113 HtD~sy~~~pP~~~~L~c~~-~p~~GGeT~~--ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~  189 (323)
                      |||++|...||++++|+|++ .+..||+|.|  +|+.++++.|....|      ....+.+.  .+            +.
T Consensus       146 HTDgtY~~e~Pg~qlLhcL~E~~~~GGESlll~vD~~e~le~L~~~~~------~~~~~~~~--~p------------~~  205 (311)
T d1jr7a_         146 HNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPL------ARRPMRFA--AP------------PS  205 (311)
T ss_dssp             ECSCTTSSSCCCEEEEEEEEEESCCBCCEEEEEGGGCTTHHHHHTSGG------GGSCEEEC--CS------------SC
T ss_pred             ccCCCCCCchhhhhhhheeeecccCCCceEEeccchHHHHHHhhhccc------ccceeEEc--cC------------CC
Confidence            99999999999999999996 5779999999  899888888874322      22222221  00            00


Q ss_pred             cccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCcceecCCCC
Q 020626          190 SIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGS  268 (323)
Q Consensus       190 ~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~  268 (323)
                      .                         +   ......||++..++. |++.. |+..   ..                  .
T Consensus       206 ~-------------------------~---~~~~~~~pi~~~d~~-g~~~iry~d~---~~------------------~  235 (311)
T d1jr7a_         206 K-------------------------N---VSKDVFHPVFDVDQQ-GRPVMRYIDQ---FV------------------Q  235 (311)
T ss_dssp             T-------------------------T---CCCCEEECSEEECTT-SCEEECCCTT---TE------------------E
T ss_pred             c-------------------------c---cccceeeeeeccccC-Cceeeccchh---cc------------------c
Confidence            0                         0   112345788876654 55432 2110   00                  1


Q ss_pred             CCC---HHHHHHHHHHHH--HhcccccccCCCEEEEecccccccCCCCCC---Cceeeec
Q 020626          269 PYP---EDIVYNLMKILE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR---PRHILAS  320 (323)
Q Consensus       269 ~~~---~~~l~~l~~~~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g---~Rr~l~~  320 (323)
                      +..   ..+++.|.+.+.  ++++.++|+|||+||+||+|+||||++|++   .+|+|.+
T Consensus       236 p~~~~q~~al~~Lsd~L~~p~~~~~fkL~pGd~lI~DN~RvLHGR~aF~~~~~~~R~LlR  295 (311)
T d1jr7a_         236 PKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMR  295 (311)
T ss_dssp             CCSHHHHHHHHHHHHHHHTCTTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEEEE
T ss_pred             ccchhHHHHHHHHHHHHhCcccEEEEEcCCCCEEEEeCCEEeeCCCCCCCCCCCceEEEE
Confidence            111   235666666553  589999999999999999999999999964   4565544