Citrus Sinensis ID: 020715

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MCSALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHcccccEEEEcccEEEEEEcccccccEEEEEccccEEEEEEEccccccccccEEEEEEEEcccccccccccccccccEEcccccHHHccccccccHHHHHcccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccHEEccHHHHHccHHHHHHHHcccEEEEcccEEEEEccccccccEEEEccccccEEHHHHHHccccccccEEEEEEEEEccccHHHHHHHccccEEEccHHHHHHHccccccHHHHHHcccccHHHEEEEEcccccccccccccHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccHHHccccccHHcccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHcccc
Coil and Loop (DISEMBL)
mcsalqfnarsesvtekasfrrllpksRCLAAVEGFYEWkkdgskkqpyyvhfkdgrpLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHdrmpvilgdkessdawlngsssskydtilkpyeesdlvwypvtpamgklsfdgpecikeiplktegknpisnffLKKEIKKEQeskmdekssfdesvktnlpkrmkgepikeikeepvsgleekysfdttaqtnlpksvkdeavtaddirtqssvekgdpdtksvasvlsdedtkKELQKRDYKEfladskpvidgnnkletsplkrkgnvkdagekqptlfsyyskk
Flexible Loop (DISEMBL)
mcsalqfnarsesvtekasfrrllpksRCLAAVEGFyewkkdgskkqPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEiplktegknpisnffLKKEIKKeqeskmdekssfdesvktnlpkrmkgepikeikeepvsglEEKYSfdttaqtnlpksvkdeavtaddirtqssvekgdpdtksvasvlsdedtkkelqkrdykefladskpvidgnnkletsplkrkgnvkdagekqptlfsyyskk
Low Complexity Region (SEG)
MCSALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGepikeikeepVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Disordered region (IsUnstruct)
********************RRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDK****AWL******KYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKT*****ISNFFL*********************************************************************************************************************************************************
Disordered Region (DISOPRED)
*CSALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI********************************************************************************************************************************************************************FSYYSK*
Disordered Region (DISEMBL)
*******************FRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIK****************VKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ*************************LQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Disordered Region (DISPRO)
****LQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL************************************************************************************************************************************************************PT********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCSALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	322	2.2.26 [Sep-21-2011]
Q04471	368	Uncharacterized protein Y	yes	no	0.751	0.657	0.327	9e-25
Q6P7N4	335	UPF0361 protein C3orf37 h	yes	no	0.496	0.477	0.333	3e-23
O64131	224	UPF0361 protein yoqW OS=B	yes	no	0.453	0.651	0.38	2e-22
O31916	224	UPF0361 protein YoqW OS=B	yes	no	0.453	0.651	0.38	2e-22
Q6IND6	336	UPF0361 protein C3orf37 h	N/A	no	0.481	0.461	0.337	6e-22
O34915	219	UPF0361 protein YobE OS=B	no	no	0.406	0.598	0.4	4e-21
O34906	227	UPF0361 protein YoaM OS=B	no	no	0.406	0.577	0.392	2e-20
Q5ZJT1	336	UPF0361 protein C3orf37 h	yes	no	0.472	0.452	0.312	1e-19
Q8R1M0	353	UPF0361 protein C3orf37 h	yes	no	0.462	0.422	0.301	3e-19
Q5XIJ1	353	UPF0361 protein C3orf37 h	yes	no	0.462	0.422	0.307	4e-19

>sp|Q04471|YM04_YEAST Uncharacterized protein YMR114C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR114C PE=1 SV=1

 Score =  114 bits (285), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 141/275 (51%), Gaps = 33/275 (12%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNAR E++ E   + R   K RC   + G++EWK  G KK PY++  +DGR +  A +YD
Sbjct: 101 FNARLENLQESKMWMRPCEKKRCAVLMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYD 160

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILG-DKESSDAWLNGS----SSSKYDT 121
                E + LYTFTI+T      L+WLH+RMP +L    ES DAW++      S+ +   
Sbjct: 161 Y---VEKDDLYTFTIITAQGPRELEWLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVK 217

Query: 122 ILKP-YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESK 180
           +LKP Y+ES L +Y VT  +GK +  G   IK  PL  E     S+ F  K  K+E   +
Sbjct: 218 LLKPDYDESKLQFYQVTDDVGKTTNTGERLIK--PLLKED----SDMFSVKREKEEALLE 271

Query: 181 MDEKSSFD-ESVKTNLPKRMKGEPI----KEIKEEPVSGLEEKYSFDTTAQTNLPKSVKD 235
            D +   D   VK +  K +KGE +    K +K     GL++    +   +T LP    +
Sbjct: 272 NDNEQGIDNRGVKGD--KSLKGEDVFNQKKSLKRNSYDGLKKN---EEQEETTLP----E 322

Query: 236 EAVTADDIRTQ----SSVEKGDPDTKSVASVLSDE 266
           E    D ++ +    S   +G+ + +++ ++L ++
Sbjct: 323 EGSIGDRVKREEANLSPKREGNREKRNIVNMLGNQ 357

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q6P7N4|CC037_XENTR UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis GN=TGas027m07.1 PE=2 SV=1

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 23/183 (12%)

Query: 3   SALQF---NARSESVTEKASFRRLLPKS-RCLAAVEGFYEWKKDGSKKQPYYVHF----- 53
           S +Q+   N RS+++TEKA ++  L K  RC+   +GFYEW++  S+KQPYY++F     
Sbjct: 90  SKMQYKTNNCRSDTMTEKALYKASLFKGKRCVVLADGFYEWQRQNSEKQPYYIYFPQIKA 149

Query: 54  ------------KDGRPLVFAALYDTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVI 100
                          R L  A L+D W+  + GE LY++T++T  SS  + W+HDRMP I
Sbjct: 150 EKSPAEQDITDWNGQRLLTMAGLFDCWEPPNGGETLYSYTVITVDSSKTMNWIHDRMPAI 209

Query: 101 LGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEG 160
           L   E+   WL+       D +   +   ++ ++PV+  +     + PEC+  I L T+ 
Sbjct: 210 LDGDEAVRKWLDFGEVPTKDALKLIHPIENITYHPVSTVVNNSRNNTPECMAAIIL-TQK 268

Query: 161 KNP 163
           K P
Sbjct: 269 KGP 271

Xenopus tropicalis (taxid: 8364)

>sp|O64131|YOQW_BPSPB UPF0361 protein yoqW OS=Bacillus phage SPbeta GN=yoqW PE=3 SV=1

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
             NAR+E+++EK SFR+ L   RC+   + FYEWK+ D   K P  +  K      FA L
Sbjct: 74  MINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133

Query: 65  YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
           Y+ W + EG  LYT TI+TT  +  ++ +HDRMPVIL D E+   WLN   +      ++
Sbjct: 134 YEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTD-ENEKEWLNPKNTDPDYLQSL 192

Query: 123 LKPYEESDLVWYPVTPAMGKLSFDGPECIK 152
           L+PY+  D+  Y V+  +     + PE I+
Sbjct: 193 LQPYDADDMEAYQVSSLVNSPKNNSPELIE 222

Bacillus phage SPbeta (taxid: 66797)

>sp|O31916|YOQW_BACSU UPF0361 protein YoqW OS=Bacillus subtilis (strain 168) GN=yoqW PE=3 SV=1

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
             NAR+E+++EK SFR+ L   RC+   + FYEWK+ D   K P  +  K      FA L
Sbjct: 74  MINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133

Query: 65  YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
           Y+ W + EG  LYT TI+TT  +  ++ +HDRMPVIL D E+   WLN   +      ++
Sbjct: 134 YEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTD-ENEKEWLNPKNTDPDYLQSL 192

Query: 123 LKPYEESDLVWYPVTPAMGKLSFDGPECIK 152
           L+PY+  D+  Y V+  +     + PE I+
Sbjct: 193 LQPYDADDMEAYQVSSLVNSPKNNSPELIE 222

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q6IND6|CC037_XENLA UPF0361 protein C3orf37 homolog OS=Xenopus laevis PE=2 SV=1

 Score =  105 bits (261), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 20/175 (11%)

Query: 8   NARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKKDGSKKQPYYVHF------------- 53
           N RS+++TEKA ++  L K R C+   +GFYEWK+   +KQPYY++F             
Sbjct: 98  NCRSDTITEKALYKAPLFKGRRCVVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQD 157

Query: 54  ----KDGRPLVFAALYDTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSD 108
                  R L  A L+D W+  S GE LY++T++T  SS  +  +HDRMP IL   E+  
Sbjct: 158 MMDWNGQRLLTMAGLFDCWEPPSGGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIR 217

Query: 109 AWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 163
            WL+    S  D +   +   ++ ++PV+  +     +  ECI  + L T+ K P
Sbjct: 218 KWLDFGEVSTQDALKLIHPIENITYHPVSTVVNNSRNNSTECIAAVIL-TQKKGP 271

Xenopus laevis (taxid: 8355)

>sp|O34915|YOBE_BACSU UPF0361 protein YobE OS=Bacillus subtilis (strain 168) GN=yobE PE=3 SV=1

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
             NAR+E++ EK SFR+ L   RC+   + FYEWK+ D   K P  +  K      FA L
Sbjct: 74  MINARAETLAEKPSFRKPLGSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133

Query: 65  YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
           Y+ W + EG +LYT TI+T   S  ++ +HDRMPVIL D E+   WLN   +      ++
Sbjct: 134 YEKWNTLEGNLLYTCTIITIKPSELMEDIHDRMPVILTD-ENKKEWLNPKNTDPDYLQSL 192

Query: 123 LKPYEESDLVWYPVT 137
           L PY+  D+  Y V+
Sbjct: 193 LLPYDADDMEAYQVS 207

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|O34906|YOAM_BACSU UPF0361 protein YoaM OS=Bacillus subtilis (strain 168) GN=yoaM PE=3 SV=1

 Score =  100 bits (249), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
             NAR+E++TEK +FRR L   RC+   + FYEWK+ D   K P  +  K      FA L
Sbjct: 74  MINARAETITEKPAFRRPLVSKRCIIPADSFYEWKRLDSKTKIPMRIKLKSSALFAFAGL 133

Query: 65  YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
           Y+ W + +G  LYT TI+TT  +  ++ +HDRMPVIL      + WLN   +S     ++
Sbjct: 134 YEKWSTHQGYPLYTCTIITTEPNEFMKDIHDRMPVILAHDHEKE-WLNPKNTSPDYLQSL 192

Query: 123 LKPYEESDLVWYPVT 137
           L PY+  D+  Y V+
Sbjct: 193 LLPYDADDMEAYQVS 207

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q5ZJT1|CC037_CHICK UPF0361 protein C3orf37 homolog OS=Gallus gallus GN=RCJMB04_15p13 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 27/179 (15%)

Query: 3   SALQF---NARSESVTEKASFRR-LLPKSRCLAAVEGFYEWKKDGSKKQPYYVHF----- 53
           S +QF   N RS+++  K+S++  LL   RC+   +GFYEW++ G  KQPY+++F     
Sbjct: 88  SKMQFKTSNCRSDTMLSKSSYKGPLLKGKRCVVLADGFYEWQQRGGGKQPYFIYFPQNKK 147

Query: 54  -------------KDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSAALQWLHDRMPV 99
                        +  R L  A ++D W+  + GE LYT+TI+T  +S  + ++H RMP 
Sbjct: 148 HPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKGGEPLYTYTIITVDASEDVSFIHHRMPA 207

Query: 100 ILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL 156
           IL   E+ + WL+ +     +   +++P E  ++ ++PV+  +  +  D PEC+  I L
Sbjct: 208 ILDGDEAIEKWLDFAEVPTREAMKLIRPAE--NIAFHPVSTFVNSVRNDTPECLVPIEL 264

Gallus gallus (taxid: 9031)

>sp|Q8R1M0|CC037_MOUSE UPF0361 protein C3orf37 homolog OS=Mus musculus PE=2 SV=1

 Score = 95.9 bits (237), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 30/179 (16%)

Query: 3   SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
           S LQFN    RS+++ EK SF+  L K R C+   +GFYEW++    +++QPY+++F   
Sbjct: 88  SKLQFNTTNCRSDTIMEKQSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQI 147

Query: 54  ---KDG------------------RPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQW 92
              K G                  R L  A ++D W++  GE LY+++I+T  S   L  
Sbjct: 148 KTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIFDCWEAPGGECLYSYSIITVDSCRGLSD 207

Query: 93  LHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
           +H RMP IL  +E+   WL+    +  + +   +   ++ ++PV+P +     + PEC+
Sbjct: 208 IHSRMPAILDGEEAVSKWLDFGEVATQEALKLIHPIDNITFHPVSPVVNNSRNNTPECL 266

Mus musculus (taxid: 10090)

>sp|Q5XIJ1|CC037_RAT UPF0361 protein C3orf37 homolog OS=Rattus norvegicus PE=2 SV=1

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 30/179 (16%)

Query: 3   SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
           S LQFN    RS+++ EK SF+  L K R C+   +GFYEW++    +++QPY+++F   
Sbjct: 88  SKLQFNTSNCRSDTIMEKQSFKAPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQS 147

Query: 54  ---KDG------------------RPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQW 92
              K G                  R L  A ++D W+  +GE LY+++I+T  S   L  
Sbjct: 148 KTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIFDCWEPPKGERLYSYSIITVDSCRGLSD 207

Query: 93  LHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
           +H RMP IL  +E+   WL+    S  + +   +   ++ ++PV+P +     + PEC+
Sbjct: 208 IHSRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPIDNITFHPVSPVVNNSRNNTPECL 266

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
255572628	409	conserved hypothetical protein [Ricinus	0.972	0.765	0.588	2e-98
359496462	392	PREDICTED: UPF0361 protein C3orf37 homol	0.919	0.755	0.604	1e-94
224069904	367	predicted protein [Populus trichocarpa]	0.863	0.757	0.570	2e-88
357504989	354	hypothetical protein MTR_7g052250 [Medic	0.832	0.757	0.560	1e-84
356527296	382	PREDICTED: UPF0361 protein C3orf37 homol	0.913	0.769	0.566	7e-82
147845025	370	hypothetical protein VITISV_026469 [Viti	0.850	0.740	0.546	6e-79
449465298	344	PREDICTED: LOW QUALITY PROTEIN: UPF0361	0.577	0.540	0.737	2e-75
449516117	267	PREDICTED: UPF0361 protein C3orf37 homol	0.540	0.651	0.758	3e-74
30683129	487	uncharacterized protein [Arabidopsis tha	0.602	0.398	0.665	2e-72
2739372	517	hypothetical protein [Arabidopsis thalia	0.602	0.375	0.665	2e-72

>gi|255572628|ref|XP_002527247.1| conserved hypothetical protein [Ricinus communis] gi|223533340|gb|EEF35091.1| conserved hypothetical protein [Ricinus communis]

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 192/326 (58%), Positives = 229/326 (70%), Gaps = 13/326 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSESV EKASFRRLLPKSRCL A EGFYEWKKDGSKKQPYY+HFKDGRPLVFAALYD
Sbjct: 87  FNARSESVGEKASFRRLLPKSRCLVAAEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYD 146

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           +WQ+SEGEILYTFTILTTSSS+AL+WLHDRMPVILGDKES+D WLNGSSSSKYD +L+ Y
Sbjct: 147 SWQNSEGEILYTFTILTTSSSSALEWLHDRMPVILGDKESTDTWLNGSSSSKYDVVLESY 206

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           E SDLVW PVTPAMGK SFDGPEC+KEI +KTE K+ IS FF +KEIK EQE    E S+
Sbjct: 207 ESSDLVWCPVTPAMGKSSFDGPECVKEIHVKTESKSTISKFFSRKEIKGEQELNSRE-ST 265

Query: 187 FDESVKTNLPKRMKGE----------PIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDE 236
           FD+SVK +LP+ +K E          P  +I ++ +         +   +  +P   + +
Sbjct: 266 FDKSVKMDLPESVKEEYESEEKLDIPPSNQINDQDLKSNVSTIPCEDETKCQIPDHDETK 325

Query: 237 AVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLET 296
               D   T+  +   D D  S  S L  ED      KR ++E L D +   DGN KL  
Sbjct: 326 CQIPDHDETKCQIP--DHDLISNVSKLPHEDATLGQPKRHHEEALIDRELNPDGNEKLRR 383

Query: 297 SPLKRKGNVKDAGEKQPTLFSYYSKK 322
           +P ++K N+K  G+KQPTL SY+ KK
Sbjct: 384 NPARKKANLKSGGDKQPTLLSYFRKK 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496462|ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [Vitis vinifera] gi|296090568|emb|CBI40918.3| unnamed protein product [Vitis vinifera]

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/326 (60%), Positives = 230/326 (70%), Gaps = 30/326 (9%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSESV EKASFRRL+PK+RCL AVEGFYEWKKDGSKKQPYY+H KDGRPLVFAAL+D
Sbjct: 85  FNARSESVCEKASFRRLVPKNRCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFD 144

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           +W +SEGEILYT TILTTSSS+ALQWLHDRMPVILGDKES+DAWLNGSSSS+++T+LKPY
Sbjct: 145 SWANSEGEILYTCTILTTSSSSALQWLHDRMPVILGDKESTDAWLNGSSSSQFNTVLKPY 204

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           E+ DLVWYPVT AMGK SF+GPECIKEI LK E + PIS FF  K IK EQ         
Sbjct: 205 EDPDLVWYPVTQAMGKPSFEGPECIKEIQLKNE-QRPISKFFSTKGIKNEQ-------GL 256

Query: 187 FDESVKTNLPKRMKGEPIKE----IKEEPVSGLEEKYSFDTTAQ------TNLPKSVKDE 236
            +E VK+NLP+ +K EP  E    +    V G  +     +  Q      TNLPKS+K E
Sbjct: 257 SNEPVKSNLPQSLKEEPAIENSTGLPSSTVKGDHDSTCSRSIPQEESTWFTNLPKSLKQE 316

Query: 237 AVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLET 296
             T D          GD D+K       DE+  K   KRD++EF ADSKP  D   K   
Sbjct: 317 PETEDKTGLPFP---GDHDSK------CDEEATKLPIKRDFEEFSADSKPNTDTVEK--P 365

Query: 297 SPLKRKGNV-KDAGEKQPTLFSYYSK 321
           SP+ +KG + K+AG+KQPTLFSY+ K
Sbjct: 366 SPVTKKGKLNKNAGDKQPTLFSYFGK 391

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069904|ref|XP_002303080.1| predicted protein [Populus trichocarpa] gi|222844806|gb|EEE82353.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 181/317 (57%), Positives = 215/317 (67%), Gaps = 39/317 (12%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALY 65
            FNARSES++EKASFRRL+PKSRCL AVEGFYEWKKDGSKKQPYY+HFKDGRPLVFAALY
Sbjct: 90  MFNARSESLSEKASFRRLIPKSRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALY 149

Query: 66  DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 125
           D+WQ+SEGEILYTFTI+TT++S+A+QWLH+RMPVILGDKE++D WL+ SS+SK+DT+LKP
Sbjct: 150 DSWQNSEGEILYTFTIVTTAASSAIQWLHERMPVILGDKEATDTWLSVSSNSKFDTVLKP 209

Query: 126 YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKS 185
           YE SDLVWYPVTPAMGK SFDGPECIKEI LK E K  IS FF +KE K+E      E+S
Sbjct: 210 YEHSDLVWYPVTPAMGKPSFDGPECIKEIHLKMEEKGTISKFFSRKEFKEESNP---EES 266

Query: 186 SFDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRT 245
           +  +S+K                                     PKSVK+E  + + + T
Sbjct: 267 THGKSLKLE-----------------------------------PKSVKEENESEEKLET 291

Query: 246 QSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNV 305
             S +  D D KS     S E   K   KRD +E L DSK   D   K   SP K+K N+
Sbjct: 292 PCSAKTVDYDLKSELETFSHEGETKCKTKRD-REELVDSKLKTDEIVKPRASPAKKKANL 350

Query: 306 KDAGEKQPTLFSYYSKK 322
           K   +KQPTL SY+ KK
Sbjct: 351 KSVDDKQPTLLSYFGKK 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357504989|ref|XP_003622783.1| hypothetical protein MTR_7g052250 [Medicago truncatula] gi|355497798|gb|AES79001.1| hypothetical protein MTR_7g052250 [Medicago truncatula]

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/316 (56%), Positives = 218/316 (68%), Gaps = 48/316 (15%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSES+ EKASFRRLLPK+RCL AVEGFYEWKKDGSKKQPYY+HFKDGRPLVFAALYD
Sbjct: 87  FNARSESIDEKASFRRLLPKNRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYD 146

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           +WQ+SEGEILYTFTI+TTSSS+A +WLHDRMPVILGDK+++D WL  SS+S + +++KPY
Sbjct: 147 SWQNSEGEILYTFTIVTTSSSSAFKWLHDRMPVILGDKDTTDTWL--SSASSFKSVMKPY 204

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           EESDLVWYPVTPAMGK SFDGPECIKEI +KTEG  PIS FF KKE + E ++K + K  
Sbjct: 205 EESDLVWYPVTPAMGKPSFDGPECIKEIQIKTEGYIPISKFFSKKEAEVE-DTKPEHKI- 262

Query: 187 FDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ 246
                       +  EP+K                  T QT   K V +EA T       
Sbjct: 263 ------------LSHEPVK------------------TEQT---KDVSEEAKT------- 282

Query: 247 SSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVK 306
              E+GD D KS + +   ++  +   KR+Y    +DSKP +  N+++  +P K+K   K
Sbjct: 283 ---EEGDTDLKS-SGISPSQNVNRFAIKREYDAISSDSKPSLANNDQVSANPAKKKEKAK 338

Query: 307 DAGEKQPTLFSYYSKK 322
            A +KQPTLFSY+ K+
Sbjct: 339 TADDKQPTLFSYFGKR 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527296|ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [Glycine max]

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 179/316 (56%), Positives = 225/316 (71%), Gaps = 22/316 (6%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSES+ EKASFRRLLPKSRCL AVEGFYEWKKDGSKKQPYY+HFKDGRPLVFAALYD
Sbjct: 85  FNARSESIDEKASFRRLLPKSRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYD 144

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           +WQ+SEGE LYTFTI+TTSSS+ALQWLHDRMPVILG KES+D WL+ S+SS   +++KPY
Sbjct: 145 SWQNSEGETLYTFTIVTTSSSSALQWLHDRMPVILGSKESTDIWLSSSASSF-KSVMKPY 203

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           EESDLVWYPVT AMGK SFDGPECIKEI +K +G   IS FF KK   + +++K ++K+S
Sbjct: 204 EESDLVWYPVTSAMGKASFDGPECIKEIQVKAQGNTSISMFFSKKG-DESKDTKPEQKAS 262

Query: 187 FDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ 246
             E VKT        E  +++ E   +  E+K        T+  + VK E    +D+R +
Sbjct: 263 CPEVVKT--------EHTEDLTESKDTKPEQK--------TSSHEFVKTEPT--EDLRER 304

Query: 247 SSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEF-LADSKPVIDGNNKLETSPLKRKGNV 305
           +  E+G  D K   S  S   +   + KR+Y+ F  ADSKP +  ++++  +P K+K   
Sbjct: 305 AKTEEGGNDLKFHGSSHSQNVSMLPI-KREYETFSAADSKPALANHDQISPNPAKKKEKA 363

Query: 306 KDAGEKQPTLFSYYSK 321
           K A +KQPTLFSY+ K
Sbjct: 364 KTANDKQPTLFSYFGK 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845025|emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 178/326 (54%), Positives = 209/326 (64%), Gaps = 52/326 (15%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSESV EKASFRRL+PK+RCL AVEGFYEWKKDGSKKQPYY+H KDGRPLVFAAL+D
Sbjct: 85  FNARSESVCEKASFRRLVPKNRCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFD 144

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           +W +SE                      DRMPVILGDKES+DAWLNGSSSS+++T+LKPY
Sbjct: 145 SWANSE----------------------DRMPVILGDKESTDAWLNGSSSSQFNTVLKPY 182

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           E+ DLVWYPVT AMGK SF+GPECIKEI LK E + PIS FF  K IK EQ         
Sbjct: 183 EDPDLVWYPVTQAMGKPSFEGPECIKEIQLKNE-QRPISKFFSTKGIKNEQ-------GL 234

Query: 187 FDESVKTNLPKRMKGEPIKE----IKEEPVSGLEEKYSFDTTAQ------TNLPKSVKDE 236
            +E VK+NLP+ MK EP  E    +    V G  +     +  Q      TNLPKS+K E
Sbjct: 235 SNEPVKSNLPQSMKEEPAIENSTGLPSSAVKGDHDSTCSRSVPQEESTWFTNLPKSLKQE 294

Query: 237 AVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLET 296
             T D          GD D+K       DE+  K   KRD++EF ADSKP  D   K   
Sbjct: 295 PETEDKTGLPFP---GDHDSK------CDEEATKLPIKRDFEEFSADSKPNTDTVEK--P 343

Query: 297 SPLKRKGNV-KDAGEKQPTLFSYYSK 321
           SP+ +KG + K+AG+KQPTLFSY+ K
Sbjct: 344 SPVTKKGKLNKNAGDKQPTLFSYFGK 369

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465298|ref|XP_004150365.1| PREDICTED: LOW QUALITY PROTEIN: UPF0361 protein C3orf37 homolog, partial [Cucumis sativus]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/187 (73%), Positives = 153/187 (81%), Gaps = 1/187 (0%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALY 65
            FNARSES+ EKASF RL+PK RCL AVEGFYEWKKDG KKQPYY+HFKDG+PL  AALY
Sbjct: 84  MFNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGXKKQPYYIHFKDGQPLALAALY 143

Query: 66  DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 125
           D W++ EGE+LYTFTILTTSSS AL+WLHDRMPVILGDKE  D WLN SSSSKYD++LKP
Sbjct: 144 DCWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSSSSKYDSVLKP 203

Query: 126 YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKS 185
           YE  DLVWYPVTP+MGK SFDGP+CIKEI LK +G N IS FF  KE KKE  S   EK+
Sbjct: 204 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKEY-SVSQEKT 262

Query: 186 SFDESVK 192
             + SVK
Sbjct: 263 CSNTSVK 269

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516117|ref|XP_004165094.1| PREDICTED: UPF0361 protein C3orf37 homolog [Cucumis sativus]

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/174 (75%), Positives = 146/174 (83%)

Query: 6   QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALY 65
            FNARSES+ EKASF RL+PK RCL AVEGFYEWKKDGSKKQPYY+HFKDG+PL  AALY
Sbjct: 84  MFNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLALAALY 143

Query: 66  DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 125
           D W++ EGE+LYTFTILTTSSS AL+WLHDRMPVILGDKE  D WLN SSSSKYD++LKP
Sbjct: 144 DCWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSSSSKYDSVLKP 203

Query: 126 YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQES 179
           YE  DLVWYPVTP+MGK SFDGP+CIKEI LK +G N IS FF  KE K+   S
Sbjct: 204 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKRNIRS 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30683129|ref|NP_180215.2| uncharacterized protein [Arabidopsis thaliana] gi|26449484|dbj|BAC41868.1| unknown protein [Arabidopsis thaliana] gi|29028900|gb|AAO64829.1| At2g26470 [Arabidopsis thaliana] gi|330252748|gb|AEC07842.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 157/200 (78%), Gaps = 6/200 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSESV EKASFRRLLPK+RCL AV+GFYEWKK+GSKKQPYY+HF+DGRPLVFAAL+D
Sbjct: 86  FNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFD 145

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           TWQ+S GE LYTFTILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PY
Sbjct: 146 TWQNSGGETLYTFTILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPY 205

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           E+SDLVWYPVT A+GK +FDGPECI++IPLKT   + IS FF  K      + K DE   
Sbjct: 206 EKSDLVWYPVTSAIGKPTFDGPECIQQIPLKTSQNSLISKFFSTK------QPKTDEGDK 259

Query: 187 FDESVKTNLPKRMKGEPIKE 206
             +S   N+   +K EP  E
Sbjct: 260 ETKSTDANIIVDLKKEPTAE 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2739372|gb|AAC14496.1| hypothetical protein [Arabidopsis thaliana]

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 157/200 (78%), Gaps = 6/200 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           FNARSESV EKASFRRLLPK+RCL AV+GFYEWKK+GSKKQPYY+HF+DGRPLVFAAL+D
Sbjct: 116 FNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFD 175

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
           TWQ+S GE LYTFTILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PY
Sbjct: 176 TWQNSGGETLYTFTILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPY 235

Query: 127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
           E+SDLVWYPVT A+GK +FDGPECI++IPLKT   + IS FF  K      + K DE   
Sbjct: 236 EKSDLVWYPVTSAIGKPTFDGPECIQQIPLKTSQNSLISKFFSTK------QPKTDEGDK 289

Query: 187 FDESVKTNLPKRMKGEPIKE 206
             +S   N+   +K EP  E
Sbjct: 290 ETKSTDANIIVDLKKEPTAE 309

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2066241	487	AT2G26470 "AT2G26470" [Arabido	0.798	0.527	0.531	2.4e-69
UNIPROTKB|Q74H52	223	GSU0040 "Uncharacterized prote	0.453	0.654	0.452	1.3e-31
TIGR_CMR|GSU_0040	223	GSU_0040 "conserved hypothetic	0.453	0.654	0.452	1.3e-31
ASPGD|ASPL0000013479	388	AN4161 [Emericella nidulans (t	0.515	0.427	0.430	6.1e-31
UNIPROTKB|Q3ABM4	224	CHY_1639 "Putative uncharacter	0.453	0.651	0.402	8.2e-28
TIGR_CMR|CHY_1639	224	CHY_1639 "conserved hypothetic	0.453	0.651	0.402	8.2e-28
SGD|S000004720	368	YMR114C "Protein of unknown fu	0.782	0.684	0.320	5.7e-27
UNIPROTKB|Q0C2F1	224	HNE_1375 "Putative uncharacter	0.459	0.660	0.370	7e-22
UNIPROTKB|Q5LPE7	221	SPO2901 "Uncharacterized prote	0.450	0.656	0.348	2.5e-19
TIGR_CMR|SPO_2901	221	SPO_2901 "conserved hypothetic	0.450	0.656	0.348	2.5e-19

TAIR|locus:2066241 AT2G26470 "AT2G26470" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 145/273 (53%), Positives = 190/273 (69%)

Query:     7 FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
             FNARSESV EKASFRRLLPK+RCL AV+GFYEWKK+GSKKQPYY+HF+DGRPLVFAAL+D
Sbjct:    86 FNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFD 145

Query:    67 TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
             TWQ+S GE LYTFTILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PY
Sbjct:   146 TWQNSGGETLYTFTILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPY 205

Query:   127 EESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSS 186
             E+SDLVWYPVT A+GK +FDGPECI++IPLKT   + IS FF  K+ K ++  K  E  S
Sbjct:   206 EKSDLVWYPVTSAIGKPTFDGPECIQQIPLKTSQNSLISKFFSTKQPKTDEGDK--ETKS 263

Query:   187 FDESVKTNLPKRMKGXXXXXXXXXXVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ 246
              D ++  +L K  +           +  +EE         +N+ K+++ + +    ++ +
Sbjct:   264 TDANIIVDLKK--EPTAEKDTFSDSIKKIEELDG--EKDMSNVAKNLEFQEI----VKAE 315

Query:   247 SSVEKGDPDTKSVASVLSDEDTKKELQKRDYKE 279
               VE    D  +VAS+   E  K ++Q+   +E
Sbjct:   316 PFVE----DNSAVASL--PEPVKNDVQEGTKEE 342

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74H52 GSU0040 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 67/148 (45%), Positives = 96/148 (64%)

Query:     8 NARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT 67
             NARSE+V EK +FR      RCL    GFYEWK +G++KQP Y+H KDG P+VFA L+++
Sbjct:    74 NARSETVAEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWES 133

Query:    68 WQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT-ILKPY 126
             W+S EG I+ + TILTT S++ ++ LHDRMPVILG +   D WL+  ++S+  T + +PY
Sbjct:   134 WKSPEGAIVESCTILTTYSNSLIRPLHDRMPVILG-RSDWDIWLSREATSEELTPLFQPY 192

Query:   127 EESDLVWYPVTPAMGKLSFDGPECIKEI 154
                 L  YPV   +     D P+ ++ +
Sbjct:   193 PSDLLAMYPVGTGVNSPRNDSPDLLEPL 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_0040 GSU_0040 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 67/148 (45%), Positives = 96/148 (64%)

Query:     8 NARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT 67
             NARSE+V EK +FR      RCL    GFYEWK +G++KQP Y+H KDG P+VFA L+++
Sbjct:    74 NARSETVAEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWES 133

Query:    68 WQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT-ILKPY 126
             W+S EG I+ + TILTT S++ ++ LHDRMPVILG +   D WL+  ++S+  T + +PY
Sbjct:   134 WKSPEGAIVESCTILTTYSNSLIRPLHDRMPVILG-RSDWDIWLSREATSEELTPLFQPY 192

Query:   127 EESDLVWYPVTPAMGKLSFDGPECIKEI 154
                 L  YPV   +     D P+ ++ +
Sbjct:   193 PSDLLAMYPVGTGVNSPRNDSPDLLEPL 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000013479 AN4161 [Emericella nidulans (taxid:162425)]

 Score = 313 (115.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 77/179 (43%), Positives = 106/179 (59%)

Query:     8 NARSES-VTEKASFRRLLPKSRCLAAVEGFYEWKKDG--SKKQ-PYYVHFKDGRPLVFAA 63
             N R +S V ++  +  +  K RC+   +G+YEW K G   K + P+Y   KDG  + FA 
Sbjct:   115 NCRDDSLVDDRGMWTSMKRKKRCVVVCQGYYEWLKKGPGGKDRIPHYTRRKDGDLMYFAG 174

Query:    64 LYD--TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDK-ESSDAWLNG---SSSS 117
             L+D  T++ SE E LYTFTI+TTS+  +L WLHDRMPVIL  K E+ DAWL+    S S 
Sbjct:   175 LWDCVTYEGSE-EKLYTFTIITTSARPSLSWLHDRMPVILDPKTEAWDAWLDPKRTSWSK 233

Query:   118 KYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKE 176
             +   +LKPYE  +L  Y V   +GK+  + P  I  +  K E K+ I+NFFL  + K E
Sbjct:   234 ELQAVLKPYE-GELDCYQVPKEVGKVGNNSPNFIVPVDSK-ENKSNIANFFLNAKSKTE 290

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005840 "ribosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q3ABM4 CHY_1639 "Putative uncharacterized protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 60/149 (40%), Positives = 93/149 (62%)

Query:     8 NARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT 67
             NAR+E+V +K SF+ LL + RCL   +GFYEW+K G KK PY +  K+ +P  FA LYD 
Sbjct:    73 NARAENVDQKPSFKNLLIRRRCLVLADGFYEWEKSGGKKIPYRIVLKNRKPFAFAGLYDI 132

Query:    68 WQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN-GSSS-SKYDTILKP 125
             WQ   G ++Y+ TI+TT ++  ++ +HDRMPVIL + E+   WL+ G    +   ++L P
Sbjct:   133 WQDPGGRMVYSCTIITTEANKLIRSIHDRMPVIL-NHEAISIWLDLGIKDVNLIKSLLTP 191

Query:   126 YEESDLVWYPVTPAMGKLSFDGPECIKEI 154
             Y E ++  + V+  +     D P+CI+ +
Sbjct:   192 YPEKEMDIFEVSSLVNSPQVDVPQCIEPV 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1639 CHY_1639 "conserved hypothetical protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 60/149 (40%), Positives = 93/149 (62%)

Query:     8 NARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT 67
             NAR+E+V +K SF+ LL + RCL   +GFYEW+K G KK PY +  K+ +P  FA LYD 
Sbjct:    73 NARAENVDQKPSFKNLLIRRRCLVLADGFYEWEKSGGKKIPYRIVLKNRKPFAFAGLYDI 132

Query:    68 WQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN-GSSS-SKYDTILKP 125
             WQ   G ++Y+ TI+TT ++  ++ +HDRMPVIL + E+   WL+ G    +   ++L P
Sbjct:   133 WQDPGGRMVYSCTIITTEANKLIRSIHDRMPVIL-NHEAISIWLDLGIKDVNLIKSLLTP 191

Query:   126 YEESDLVWYPVTPAMGKLSFDGPECIKEI 154
             Y E ++  + V+  +     D P+CI+ +
Sbjct:   192 YPEKEMDIFEVSSLVNSPQVDVPQCIEPV 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000004720 YMR114C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 91/284 (32%), Positives = 147/284 (51%)

Query:     7 FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
             FNAR E++ E   + R   K RC   + G++EWK  G KK PY++  +DGR +  A +YD
Sbjct:   101 FNARLENLQESKMWMRPCEKKRCAVLMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYD 160

Query:    67 TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGD-KESSDAWLNGS----SSSKYDT 121
               +  +   LYTFTI+T      L+WLH+RMP +L    ES DAW++      S+ +   
Sbjct:   161 YVEKDD---LYTFTIITAQGPRELEWLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVK 217

Query:   122 ILKP-YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESK 180
             +LKP Y+ES L +Y VT  +GK +  G   IK  PL  E  +  S   +K+E K+E   +
Sbjct:   218 LLKPDYDESKLQFYQVTDDVGKTTNTGERLIK--PLLKEDSDMFS---VKRE-KEEALLE 271

Query:   181 MDEKSSFDE-SVKTNLPKRMKGXXXXXXXXX----XVSGLEEKYSFDTTAQTNLPK--SV 233
              D +   D   VK +  K +KG                GL++    +   +T LP+  S+
Sbjct:   272 NDNEQGIDNRGVKGD--KSLKGEDVFNQKKSLKRNSYDGLKKN---EEQEETTLPEEGSI 326

Query:   234 KDEAVTADDIRTQSSVEKGDPDTKSVASVLSDE-DT--KKELQK 274
              D  V  ++    S   +G+ + +++ ++L ++ D+  KK+++K
Sbjct:   327 GDR-VKREEANL-SPKREGNREKRNIVNMLGNQKDSRGKKKIKK 368

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q0C2F1 HNE_1375 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 56/151 (37%), Positives = 81/151 (53%)

Query:     4 ALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAA 63
             AL  NAR+E V EK +FR      RCL  V G+YEW   G  K P+    ++ R    A 
Sbjct:    77 ALSINARAEEVAEKPTFRGAYRHKRCLVPVSGYYEWSVQGKSKTPFAFRLRNRRLFCLAG 136

Query:    64 LYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTIL 123
             L+D     +G  + +FTILTT  +     +HDRMPVIL   E  D WL+ +S      + 
Sbjct:   137 LWDA-ALIDGSEIQSFTILTTKPNDFTAGIHDRMPVILRP-EDYDRWLDPASGDP-SGLF 193

Query:   124 KPYEESDLVWYPVTPAMGKLSFDGPECIKEI 154
             +P+   D+  +P+ PA+GK+S + P  + E+
Sbjct:   194 EPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV 224

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5LPE7 SPO2901 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/149 (34%), Positives = 81/149 (54%)

Query:     5 LQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSK-KQPYYVHFKDGRPLVFAA 63
             L  NAR+E++ EK +FR    + RCL    GFYEW + G   + P+Y+H +DG P+ FA 
Sbjct:    72 LLINARAETLAEKPAFRAACRQRRCLIPSTGFYEWTRPGGDVRLPWYIHRRDGAPIAFAG 131

Query:    64 LYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTIL 123
             ++  W   E     T  I+TT+++  L  LH RMP+IL + +    WL G +      ++
Sbjct:   132 IWQDW-GPEAARQPTCAIVTTAANRHLGQLHHRMPLIL-EPDDWPLWL-GEAGHGAARLM 188

Query:   124 KPYEESDLVWYPVTPAMGKLSFDGPECIK 152
             +P  E  L ++ V PA+      GP+ I+
Sbjct:   189 QPGAEEVLDYHRVDPAVNSNRASGPDLIE 217

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_2901 SPO_2901 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/149 (34%), Positives = 81/149 (54%)

Query:     5 LQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSK-KQPYYVHFKDGRPLVFAA 63
             L  NAR+E++ EK +FR    + RCL    GFYEW + G   + P+Y+H +DG P+ FA 
Sbjct:    72 LLINARAETLAEKPAFRAACRQRRCLIPSTGFYEWTRPGGDVRLPWYIHRRDGAPIAFAG 131

Query:    64 LYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTIL 123
             ++  W   E     T  I+TT+++  L  LH RMP+IL + +    WL G +      ++
Sbjct:   132 IWQDW-GPEAARQPTCAIVTTAANRHLGQLHHRMPLIL-EPDDWPLWL-GEAGHGAARLM 188

Query:   124 KPYEESDLVWYPVTPAMGKLSFDGPECIK 152
             +P  E  L ++ V PA+      GP+ I+
Sbjct:   189 QPGAEEVLDYHRVDPAVNSNRASGPDLIE 217

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002557 hypothetical protein (367 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
pfam02586	200	pfam02586, DUF159, Uncharacterized ACR, COG2135	3e-55
COG2135	226	COG2135, COG2135, Uncharacterized conserved protei	9e-48
PRK09951	222	PRK09951, PRK09951, hypothetical protein; Provisio	1e-21

>gnl|CDD|217124 pfam02586, DUF159, Uncharacterized ACR, COG2135

 Score =  178 bits (453), Expect = 3e-55
 Identities = 65/142 (45%), Positives = 83/142 (58%), Gaps = 8/142 (5%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR+E+V EK SFR    + RCL   +GFYEWKK+G  KQPYY+   DG PL FA L++
Sbjct: 67  INARAETVAEKPSFRSAFKRRRCLVPADGFYEWKKEGGGKQPYYISLADGEPLAFAGLWE 126

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPY 126
            W   +GE L +FTILTT ++  L  +HDRMPVIL   E  DAWL+  +           
Sbjct: 127 RWNDPDGEELESFTILTTPANGLLAPIHDRMPVIL-PPEDWDAWLDPENPEADA------ 179

Query: 127 EESDLVWYPVTPAMGKLSFDGP 148
               L  YPV+P +  +  DGP
Sbjct: 180 -LLLLEAYPVSPRVNNVRNDGP 200

Length = 200

>gnl|CDD|225046 COG2135, COG2135, Uncharacterized conserved protein [Function unknown]

 Score =  159 bits (405), Expect = 9e-48
 Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 2/151 (1%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAALY 65
            NAR+E+  EK SFR      RCL   +GFYEW+K    KKQPY++  KDG    FA L+
Sbjct: 76  INARAETAAEKRSFRAAFQSRRCLVPADGFYEWRKEPKKKKQPYFIRRKDGALFFFAGLW 135

Query: 66  DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 125
           +TW  + G+ L +FTILTT ++  L  +HDRMPV+L   E  DAWL+  +  +   +L+P
Sbjct: 136 ETWFEAGGDELESFTILTTEANDLLAPIHDRMPVVL-APEDWDAWLDPKTPPELKELLRP 194

Query: 126 YEESDLVWYPVTPAMGKLSFDGPECIKEIPL 156
               DL  YPV+  +  +  DGPE I+   L
Sbjct: 195 LPADDLSAYPVSTLVNNVKNDGPELIEPASL 225

Length = 226

>gnl|CDD|182162 PRK09951, PRK09951, hypothetical protein; Provisional

 Score = 91.1 bits (226), Expect = 1e-21
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 8   NARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT 67
           NAR E+      F+ L    R +   +G++EWKK+G KKQPY+++  DG+P+  AA+  T
Sbjct: 75  NARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRADGQPIFMAAIGST 134

Query: 68  --WQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSK-YDTILK 124
              +  E E    F I+T ++   L  +HDR P++L   E++  W+    S K    I  
Sbjct: 135 PFERGDEAE---GFLIVTAAADQGLVDIHDRRPLVL-SPEAAREWMRQEISGKEASEIAT 190

Query: 125 --PYEESDLVWYPVTPAMGKLSFDGPECIKEI 154
                 +   W+PV+ A+G +   G E I+ +
Sbjct: 191 SGCVPANQFTWHPVSRAVGNVKNQGAELIQPV 222

Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
COG2135	226	Uncharacterized conserved protein [Function unknow	100.0
KOG2618	366	consensus Uncharacterized conserved protein [Funct	100.0
PRK09951	222	hypothetical protein; Provisional	100.0
PF02586	208	DUF159: Uncharacterised ACR, COG2135; InterPro: IP	100.0

>COG2135 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.4e-48  Score=358.05  Aligned_cols=153  Identities=42%  Similarity=0.766  Sum_probs=143.0

Q ss_pred             CCCceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCC-cccEEEEecCCCcEEEEEeeccccCCCCceeEEEE
Q 020715            2 CSALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSK-KQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFT   80 (322)
Q Consensus         2 ~g~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~k-KqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~Sft   80 (322)
                      -|+++||||+||+.++++|+.+++++||||||+|||||+..+++ |+||||+++||.+|+|||||+.|...+|..+++||
T Consensus        71 ~~~~~~NaR~et~ae~~~Fr~a~~~~RCLVPadgFyEW~~~~~~~k~p~fi~~~dg~lf~fAGlw~~~~~~~~~~~~s~t  150 (226)
T COG2135          71 KGPPLINARAETAAEKRSFRAAFQSRRCLVPADGFYEWRKEPKKKKQPYFIRRKDGALFFFAGLWETWFEAGGDELESFT  150 (226)
T ss_pred             cCCCceEeccccccccccchhhhhcCceEEEcCcceecccCCCcCCCceEEEcCCCCeEEEEEeccccccCCCCccceEE
Confidence            36889999999999999999999999999999999999987555 99999999999999999999999877788999999


Q ss_pred             EEecCCchhhhhcccCceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCccccccccc
Q 020715           81 ILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP  155 (322)
Q Consensus        81 IITt~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~Pi~  155 (322)
                      ||||+||..|++|||||||||. +++++.||++....++.+||+|++.+.|.+|||+..||+++|++++||+|..
T Consensus       151 ilTt~an~~la~iHdRmpvVL~-~e~~~~WLd~~~~~e~~~Llrp~p~~~l~~~~vs~~Vn~~~n~~~el~~p~~  224 (226)
T COG2135         151 ILTTEANDLLAPIHDRMPVVLA-PEDWDAWLDPKTPPELKELLRPLPADDLSAYPVSTLVNNVKNDGPELIEPAS  224 (226)
T ss_pred             EEEccCchhhhhhhhcCceecC-hhHHHHhhCCCCchHHHHhccCCCccceEEEEcccccCCcccCCcccccccc
Confidence            9999999999999999999997 7899999999722368899999999999999999999999999999999975

>KOG2618 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=5.5e-48  Score=367.01  Aligned_cols=168  Identities=46%  Similarity=0.798  Sum_probs=154.4

Q ss_pred             CCceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEEEEE
Q 020715            3 SALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTIL   82 (322)
Q Consensus         3 g~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~SftII   82 (322)
                      +.+|||||+|+|+++.+|+..+.+.||||.|+|||||+..+++||||||+..||++|+|||||+.|.+..|+.+||||||
T Consensus        97 ~f~tfNaRlE~lmEsksfrrpl~KgRCvVl~dGfyEWkt~gskkqpYfI~f~dgRlL~mAglfD~wE~egGD~LYtfTII  176 (366)
T KOG2618|consen   97 TFRTFNARLENLMESKSFRRPLEKGRCVVLMDGFYEWKTVGSKKQPYFISFRDGRLLFMAGLFDYWEKEGGDDLYTFTII  176 (366)
T ss_pred             ceeecccchHHHHhhhhhhccCCCCcEEEEecceeeeeeccccCCceEEEEecCceeEeeeehheecccCCceeEEEEEE
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCchhhhhcccCceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCccccccccccccCCCC
Q 020715           83 TTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKN  162 (322)
Q Consensus        83 Tt~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~Pi~~k~~~k~  162 (322)
                      |+++...|+|||+|||+||.+.+.|+.|||-........|+-+|+.+.|+||+|+..|||++|+||+||+||.+... ..
T Consensus       177 T~qssk~LswlH~RMPaILegees~d~WLDf~~tt~~eaLk~~yp~s~Lq~y~VTs~Vgkstn~geecikpi~l~~s-~~  255 (366)
T KOG2618|consen  177 TAQSSKELSWLHERMPAILEGEESWDAWLDFDKTTWVEALKPDYPESKLQFYQVTSDVGKSTNTGEECIKPILLEDS-ND  255 (366)
T ss_pred             EecCchHhHHHHhhCceeecChhhHHhhhcCcccchhhhhcCCCcchheeEEEehhhhCCCCCCchhhhcccccccc-cc
Confidence            99999999999999999999889999999987665567777789999999999999999999999999999986533 34


Q ss_pred             ccccccccc
Q 020715          163 PISNFFLKK  171 (322)
Q Consensus       163 ~i~~fF~~k  171 (322)
                      .++.+|...
T Consensus       256 ~~s~~~~t~  264 (366)
T KOG2618|consen  256 MFSVKRETE  264 (366)
T ss_pred             ccccccccc
Confidence            566666554

>PRK09951 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-47  Score=352.47  Aligned_cols=149  Identities=30%  Similarity=0.567  Sum_probs=133.2

Q ss_pred             CceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEEEEEe
Q 020715            4 ALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILT   83 (322)
Q Consensus         4 ~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~SftIIT   83 (322)
                      ..+||||+|||.++++|+.+++++||||||+|||||++.+++|+||||+++|+.+|+|||||+.|.. .|+.+.||||||
T Consensus        71 ~~~~NAR~Et~~~k~~Fr~~~~~~RClIPa~GfyEW~~~~~~k~p~~i~~~d~~~l~~AGl~~~~~~-~~~~~~tftIlT  149 (222)
T PRK09951         71 PPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRADGQPIFMAAIGSTPFE-RGDEAEGFLIVT  149 (222)
T ss_pred             CCceeeeccccccCHhHHHHHHcCcEEEEccceEEcccCCCCccceEEEeCCCCcEEEEEecccccC-CCCeeeEEEEEe
Confidence            4789999999999999999999999999999999999877789999999999999999999986533 366788999999


Q ss_pred             cCCchhhhhcccCceeecCChhhHhhhcCCCCch-HHH--HhcCCCCCCCceEeEcCCCCCCCCCCcccccccc
Q 020715           84 TSSSAALQWLHDRMPVILGDKESSDAWLNGSSSS-KYD--TILKPYEESDLVWYPVTPAMGKLSFDGPECIKEI  154 (322)
Q Consensus        84 t~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~~-~~~--~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~Pi  154 (322)
                      ++||+.|++|||||||||. +++++.||+++... ++.  .++.+++.+.|++|||++.|||++|++|+||+|+
T Consensus       150 ~~a~~~~~~iH~RmPviL~-~~~~~~WL~~~~~~~~~~~~~~~~~~~~~~l~~~pVs~~Vn~~~~~~p~~i~p~  222 (222)
T PRK09951        150 AAADQGLVDIHDRRPLVLS-PEAAREWMRQEISGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV  222 (222)
T ss_pred             CCCCcccccccCCCceEeC-HhHHHHhcCCCCCchhhhHHhhccCCCccceEEEECCCccCCcCCCChHHhcCC
Confidence            9999999999999999997 78999999997542 233  2456677789999999999999999999999985

>PF02586 DUF159: Uncharacterised ACR, COG2135; InterPro: IPR003738 This entry describes proteins of unknown function

Probab=100.00  E-value=1.1e-44  Score=327.47  Aligned_cols=140  Identities=42%  Similarity=0.802  Sum_probs=116.9

Q ss_pred             CCceeeeecCCccCChhhhhhcCCCeeEEeecceeeee--cCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEEE
Q 020715            3 SALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWK--KDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFT   80 (322)
Q Consensus         3 g~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~--~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~Sft   80 (322)
                      +..+||||+|+|.++|+|+++++++||||||+|||||+  ..+++|+||||+++|+++|+|||||+.|.+.+|+.+.+||
T Consensus        67 ~~~~~NAR~Etl~~k~~fr~~~~~~RClVp~~gfyEW~~~~~~~~k~py~i~~~d~~~~~~AGl~~~~~~~~~~~~~~f~  146 (208)
T PF02586_consen   67 KPPTINARSETLAEKPMFRDAFKRRRCLVPADGFYEWQPKKEKGKKQPYYIHRKDGEPFALAGLWDRWRDPDGEELYSFA  146 (208)
T ss_dssp             CCCBSEEEHCCCTTSTTTHHHHCCGEEEEEESEEEEEEECCCTSSEEEEEEEETTSCCEEEEEEEEEEECTTSTCEEEEE
T ss_pred             CcccceeecchHhhhhhHhheecCcEEEEEeeeEEEeeeccccCCceeEEEEcCCCCeEEEEEEeeccccccccccceEE
Confidence            36899999999999999999999999999999999999  6778999999999999999999999999998887789999


Q ss_pred             EEecCCchhhhhcccCceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCcc
Q 020715           81 ILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGP  148 (322)
Q Consensus        81 IITt~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~p  148 (322)
                      |||++||+.|++|||||||||. +++++.||+++.......++..++..     ||++.|||++||||
T Consensus       147 ilT~~a~~~~~~iH~RmPviL~-~e~~~~WL~~~~~~~~~~~~~~~~~~-----~Vs~~Vn~~~n~~p  208 (208)
T PF02586_consen  147 ILTTPANPEMAPIHDRMPVILP-PEDWDRWLDPDIPEEDALLLLLLPAE-----PVSTRVNNPRNNGP  208 (208)
T ss_dssp             EEEEEGCTCGCCTTSEEE-EES-HHHHHHHHHTTCHHHHHHHHHC---H-----E--CGCGSCT----
T ss_pred             EEecCCChhhhhccCCeeEEEC-HHHHHHhcCCCCChHHHHHhcccCCC-----CcccccCCcccCCC
Confidence            9999999999999999999997 89999999998763222222222211     99999999999987

; PDB: 2F20_A 1ZN6_A 2BDV_A 2ICU_B 2AEG_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	322
2f20_A	240	X-Ray Crystal Structure Of Protein Bt_1218 From Bac		5e-17
2icu_A	229	Crystal Structure Of Hypothetical Protein Yedk From		5e-15
2bdv_A	231	X-ray Crystal Structure Of Phage-related Protein Bb		4e-09
1zn6_A	227	X-Ray Crystal Structure Of Protein Q7wlm8 From Bord		1e-05

>pdb|2F20|A Chain A, X-Ray Crystal Structure Of Protein Bt_1218 From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr8. Length = 240

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR++++ EK SFR  + K RC+    G++EW+ +G+ K PYY++ KD      A +YD
Sbjct: 81  LNARADTIFEKPSFREPIXKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSXAGIYD 140
Query: 67  TWQSSE-GEILYTFTILTTSSSAALQWLHD---RMPVILGDKESSDAWLNGS-SSSKYDT 121
            W   + GE   TF+I+TT +++   ++ +   R P IL  +E  + WLN S S ++  +
Sbjct: 141 RWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRXPAILT-QEEEEKWLNPSLSKAEIAS 199
Query: 122 ILKPYE 127
           +LKP++
Sbjct: 200 LLKPFD 205

>pdb|2ICU|A Chain A, Crystal Structure Of Hypothetical Protein Yedk From Escherichia Coli Length = 229

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR E+      F+ L    R +   +G++EWKK+G KKQP++++  DG+P+  AA+  
Sbjct: 81  INARVETAATSRXFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFXAAIGS 140
Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP- 125
           T     G+    F I+T ++   L  +HDR P++L   E++  W     S K  + +   
Sbjct: 141 T-PFERGDEAEGFLIVTAAADQGLVDIHDRRPLVL-SPEAAREWXRQEISGKEASEIAAS 198
Query: 126 --YEESDLVWYPVTPAMGKLSFDGPECIKEI 154
                +   W+PV+ A+G +   G E I+ +
Sbjct: 199 GCVPANQFSWHPVSRAVGNVKNQGAELIQPV 229

>pdb|2BDV|A Chain A, X-ray Crystal Structure Of Phage-related Protein Bb2244 From Bordetella Bronchiseptica. Northeast Structural Genomics Consortium Target Bor24 Length = 231

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 3   SALQFNARSESVTEKA-SFRRLLPKSRCLAAVEGFYEWKK--DGSK--KQPYYVHFKDGR 57
           S    NA+ E++      ++  +   R L   +G+YEWK    G K  KQPYY+H     
Sbjct: 68  SFFXINAKLETIERHGWPWKLXIGTGRILVPADGWYEWKALDSGPKPAKQPYYIH--GDA 125
Query: 58  PLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSS- 116
           PL+FA L    + +E +  + F I+T  +   +  +HDR PV L   E +  W++ ++  
Sbjct: 126 PLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMVDVHDRRPVAL-PPELAREWVDPATPV 184
Query: 117 SKYDTILKP-YEESDLVWYPVTPAMGKLSFDGPECIKEI 154
           ++   IL+    E+   WYPV   +G   +  P+ +  +
Sbjct: 185 ARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPDAVDPL 223

>pdb|1ZN6|A Chain A, X-Ray Crystal Structure Of Protein Q7wlm8 From Bordetella Bronchiseptica. Northeast Structural Genomics Consortium Target Bor19 Length = 227

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 8   NARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
           NARSE+  +  +FR    K++ C+   +  YE      K  P      DG PL  A L+D
Sbjct: 84  NARSETAHQLWTFRNAWAKAQHCIIPADAIYEPDWRSGKAVPTRFTRADGAPLGIAGLWD 143
Query: 67  TWQSSEGEILYTFTILTTSS--SAALQWLHD-----RMPVILGDKESSDAWLNGSSSSKY 119
            ++++ GE + ++T LT ++      +  H      R  VIL D    D WL   ++   
Sbjct: 144 RYRNAAGEWIDSYTXLTINADDDPLFRDYHQAGKEKRXVVILPDGAYGD-WLTAPATDTR 202
Query: 120 DTILKPYEESDLV 132
           D +L PY    LV
Sbjct: 203 DFLL-PYPADRLV 214

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	322
2icu_A	229	Hypothetical protein YEDK; structural genomics, PS	2e-66
2f20_A	240	Conserved hypothetical protein, with conserved dom	4e-65
2bdv_A	231	Phage-related conserved hypothetical protein, BB2;	3e-62
1zn6_A	227	Phage-related conserved hypothetical protein; nove	1e-53
2aeg_A	268	Hypothetical protein AGR_PAT_140; alpha-beta prote	1e-32
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2icu_A Hypothetical protein YEDK; structural genomics, PSI, protein structure initiative, southeast collaboratory for structura genomics, secsg, riken; 1.60A {Escherichia coli} Length = 229

 Score =  206 bits (527), Expect = 2e-66
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 5/151 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR E+      F+ L    R +   +G++EWKK+G KKQP++++  DG+P+  AA+  
Sbjct: 81  INARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGS 140

Query: 67  TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT---IL 123
           T     G+    F I+T ++   L  +HDR P++L   E++  W+    S K  +     
Sbjct: 141 TP-FERGDEAEGFLIVTAAADQGLVDIHDRRPLVL-SPEAAREWMRQEISGKEASEIAAS 198

Query: 124 KPYEESDLVWYPVTPAMGKLSFDGPECIKEI 154
                +   W+PV+ A+G +   G E I+ +
Sbjct: 199 GCVPANQFSWHPVSRAVGNVKNQGAELIQPV 229

>2f20_A Conserved hypothetical protein, with conserved domain; Q8A8E9_bactin, NESG, BTR8, structural genomics, PSI; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.303.1.1 Length = 240

 Score =  204 bits (520), Expect = 4e-65
 Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 6/161 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR++++ EK SFR  + K RC+    G++EW+ +G+ K PYY++ KD      A +YD
Sbjct: 81  LNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYD 140

Query: 67  TWQSSE-GEILYTFTILTTSSSAALQWL---HDRMPVILGDKESSDAWLNGSSSSK-YDT 121
            W   + GE   TF+I+TT +++   ++     RMP IL  +E  + WLN S S     +
Sbjct: 141 RWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRMPAIL-TQEEEEKWLNPSLSKAEIAS 199

Query: 122 ILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKN 162
           +LKP++   +  Y +     K S + P  ++         +
Sbjct: 200 LLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQRALEHHHHHH 240

>2bdv_A Phage-related conserved hypothetical protein, BB2; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.20A {Bordetella bronchiseptica} SCOP: d.303.1.1 Length = 231

 Score =  196 bits (501), Expect = 3e-62
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 7   FNARSESVTEKA-SFRRLLPKSRCLAAVEGFYEWKKDGS----KKQPYYVHFKDGRPLVF 61
            NA+ E++      ++ ++   R L   +G+YEWK   S     KQPYY+H     PL+F
Sbjct: 72  INAKLETIERHGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIHGDA--PLLF 129

Query: 62  AALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSK--Y 119
           A L    + +E +  + F I+T  +   +  +HDR PV L   E +  W++ ++      
Sbjct: 130 AGLSAWRRGAELDEAHGFAIVTNDALGGMVDVHDRRPVAL-PPELAREWVDPATPVARAK 188

Query: 120 DTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP 155
           + +     E+   WYPV   +G   +  P+ +  + 
Sbjct: 189 EILRAGLPETAFSWYPVRQEVGSSKYQLPDAVDPLL 224

>1zn6_A Phage-related conserved hypothetical protein; novel, structural genomics, PSI; 1.80A {Bordetella bronchiseptica} SCOP: d.303.1.1 Length = 227

 Score =  174 bits (443), Expect = 1e-53
 Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 7   FNARSESVTEKASFRRLLPKS-RCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALY 65
            NARSE+  +  +FR    K+  C+   +  YE      K  P      DG PL  A L+
Sbjct: 83  SNARSETAHQLWTFRNAWAKAQHCIIPADAIYEPDWRSGKAVPTRFTRADGAPLGIAGLW 142

Query: 66  DTWQSSEGEIL--YTFTILTTSSSAALQWLHD-----RMPVILGDKESSDAWLNGSSSSK 118
           D ++++ GE +  YT   +        +  H      RM VIL    +   WL    ++ 
Sbjct: 143 DRYRNAAGEWIDSYTMLTINADDDPLFRDYHQAGKEKRMVVIL-PDGAYGDWLTA-PATD 200

Query: 119 YDTILKPYEESDLVWYPVTPAMG 141
               L PY    LV   V     
Sbjct: 201 TRDFLLPYPADRLVAAAVKLEHH 223

>2aeg_A Hypothetical protein AGR_PAT_140; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Agrobacterium tumefaciens str} SCOP: d.303.1.1 Length = 268

 Score =  121 bits (303), Expect = 1e-32
 Identities = 30/172 (17%), Positives = 63/172 (36%), Gaps = 20/172 (11%)

Query: 7   FNARSESVTEKASF----RRLLPKSRCLAAVEGFYEW-----KKDGSKKQPYYVHFKDGR 57
              R  +   K +     R    + RCL  V  F E      ++ G+    ++   +   
Sbjct: 92  EPDRGVTNVRKLNLPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARDEAKS 151

Query: 58  PLVFAALY-DTWQSSEG-----EILYTFTILTTSSSAALQWLHDR-MPVILGDKESSDAW 110
            + FA ++   W+S             +  LTT  +  ++ +H++ MPV+L  +E ++ W
Sbjct: 152 LMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTTDPNDLVKPIHEKAMPVLLLTREETEIW 211

Query: 111 LNGSSSSKYDTILKPYEESDLV---WYPVTPAMGKLSFDGPECIKEIPLKTE 159
           +          + +P     L+     P   ++   S +  E  + +    E
Sbjct: 212 MRAPWDEA-KHLARPLPNDALIILSREPYGSSIVSKSGESEEQGRLLAAALE 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 34/249 (13%), Positives = 67/249 (26%), Gaps = 86/249 (34%)

Query: 110 WLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTE-GKNPISNFF 168
           WLN  + +  +T+L+  +   L  Y + P          +    I L+    +  +    
Sbjct: 186 WLNLKNCNSPETVLEMLQ--KL-LYQIDPNWTSR----SDHSSNIKLRIHSIQAELRRLL 238

Query: 169 LKKEIKKE-------QESKMDEKSSFDESVKT-------NLPKRMKGEPIKEIK-EEPVS 213
             K  +         Q +K     +F+ S K         +   +       I  +    
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWN--AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 214 GLEEKYSFDTTAQ------TNLPK---------------SVKDEAVTADDIRT------- 245
            L          +       +LP+               S++D   T D+ +        
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 246 ---QSSVEKGDPDT------------KSV---ASVLS---------------DEDTKKEL 272
              +SS+   +P               S      +LS               ++  K  L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 273 QKRDYKEFL 281
            ++  KE  
Sbjct: 417 VEKQPKEST 425

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	322
2f20_A	240	Conserved hypothetical protein, with conserved dom	100.0
2icu_A	229	Hypothetical protein YEDK; structural genomics, PS	100.0
2bdv_A	231	Phage-related conserved hypothetical protein, BB2;	100.0
1zn6_A	227	Phage-related conserved hypothetical protein; nove	100.0
2aeg_A	268	Hypothetical protein AGR_PAT_140; alpha-beta prote	100.0

>2f20_A Conserved hypothetical protein, with conserved domain; Q8A8E9_bactin, NESG, BTR8, structural genomics, PSI; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.303.1.1

Probab=100.00  E-value=9.4e-51  Score=375.38  Aligned_cols=153  Identities=33%  Similarity=0.667  Sum_probs=144.6

Q ss_pred             CCceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCC-CceeEEEEE
Q 020715            3 SALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTI   81 (322)
Q Consensus         3 g~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~-Ge~l~SftI   81 (322)
                      ++++||||+|||.+||+||.+++++||||||+|||||+..+++||||||+++||++|+|||||+.|.+++ |+.+.||||
T Consensus        77 ~~~~~NAR~Etl~~kp~fr~~~~~~RClVPa~gfyEw~~~~g~k~p~~i~~~d~~~~~~AGlw~~w~~~~~g~~~~sfti  156 (240)
T 2f20_A           77 RKMTLNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSI  156 (240)
T ss_dssp             GGGCSEEEGGGTTTCTTTTTHHHHCEEEEEESEEEEEEEETTEEEEEEEEETTCSSEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred             CCcceEecccccccchhHHHHhhCCeEEEEeceeEEcccCCCCceEEEEEcCCCCcEEEEEEeeeccCCCCCcccceEEE
Confidence            4678999999999999999999999999999999999988889999999999999999999999999877 888999999


Q ss_pred             EecCCchhhhhccc---CceeecCChhhHhhhcCCCCc-hHHHHhcCCCCCCCceEeEcCCCCCCCCCCcccccccccc
Q 020715           82 LTTSSSAALQWLHD---RMPVILGDKESSDAWLNGSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL  156 (322)
Q Consensus        82 ITt~An~~ls~IHd---RMPVIL~~~E~~d~WLdp~~~-~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~Pi~~  156 (322)
                      |||+||+.|++||+   ||||||. +++++.||++... .++..||+|++.+.|.+|||++.||+++|++|+||+|+..
T Consensus       157 iTt~an~~~~~iH~~~KRmPviL~-~e~~~~WL~~~~~~~~~~~ll~p~p~~~l~~~pVs~~Vn~~~n~~p~~i~p~~~  234 (240)
T 2f20_A          157 ITTDTNSLTDYIDNTKHRMPAILT-QEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQRALE  234 (240)
T ss_dssp             EEEECCHHHHHHSTTTCEEECEEC-GGGHHHHTCTTCCHHHHHHTCCCCCGGGEEEEEBCGGGGGSCTTCGGGGCBCCC
T ss_pred             EEccCChhhhhccCCcceeEEEeC-HHHHHHhcCCCCcHHHHHHHcccCCCCcEEEEECCCccCCcCCCChhHhchhhh
Confidence            99999999999999   9999996 7899999999865 4688999999989999999999999999999999999863

>2icu_A Hypothetical protein YEDK; structural genomics, PSI, protein structure initiative, southeast collaboratory for structura genomics, secsg, riken; 1.60A {Escherichia coli}

Probab=100.00  E-value=1.5e-50  Score=371.63  Aligned_cols=149  Identities=30%  Similarity=0.568  Sum_probs=132.3

Q ss_pred             CceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEEEEEe
Q 020715            4 ALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILT   83 (322)
Q Consensus         4 ~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~SftIIT   83 (322)
                      .++||||+|||.+||+||.+++++||||||+|||||+..+++||||||+++|+++|+|||||+.|.+ +|+.+.||||||
T Consensus        78 ~~~~NAR~Et~~~kp~fr~~~~~~RClVPa~gfyEw~~~~~~k~p~~i~~~d~~~~~~AGlw~~w~~-~g~~~~sftilT  156 (229)
T 2icu_A           78 PPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFE-RGDEAEGFLIVT  156 (229)
T ss_dssp             CCBCEEEHHHHTTCTTTHHHHHHCEEEEEESEEEEEC------CEEEEEETTCCCEEEEEEECSCGG-GCCSSBCEEEEE
T ss_pred             ccceeechhhccCchhHHhhhcCCcEEEEcceEEEcccCCCCceEEEEEecCCCcEEEEEeeecccC-CCCcCceEEEEe
Confidence            5789999999999999999999999999999999999888899999999999999999999999876 566778999999


Q ss_pred             cCCchhhhhcccCceeecCChhhHhhhcCCCCc-hHHHHhc--CCCCCCCceEeEcCCCCCCCCCCcccccccc
Q 020715           84 TSSSAALQWLHDRMPVILGDKESSDAWLNGSSS-SKYDTIL--KPYEESDLVWYPVTPAMGKLSFDGPECIKEI  154 (322)
Q Consensus        84 t~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~-~~~~~LL--~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~Pi  154 (322)
                      |+||+.|++|||||||||. +++++.||+++.. .++..||  .+++.+.|++|||++.|||++||+|+||+|+
T Consensus       157 t~an~~~~~iH~RmPviL~-~~~~~~WL~~~~~~~~a~~ll~~~~~p~~~l~~~pVs~~Vn~~~n~~p~li~p~  229 (229)
T 2icu_A          157 AAADQGLVDIHDRRPLVLS-PEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQPV  229 (229)
T ss_dssp             EECCGGGGGTCSEEECEEC-HHHHHHHHCTTCCHHHHHHHHHHHBCCGGGEEEEECCGGGGSTTCCCGGGGSCC
T ss_pred             ecCchhhhcccCceeEecC-HHHHHHhcCCCCCHHHHHHHHHhcCCCcccEEEEECCCCCCCcCCCChhhhcCC
Confidence            9999999999999999997 7899999998754 4566777  5778889999999999999999999999985

>2bdv_A Phage-related conserved hypothetical protein, BB2; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.20A {Bordetella bronchiseptica} SCOP: d.303.1.1

Probab=100.00  E-value=1.4e-49  Score=365.98  Aligned_cols=146  Identities=29%  Similarity=0.596  Sum_probs=130.7

Q ss_pred             CCceeeeecCCccCChh-hhhhcCCCeeEEeecceeeee---cCCCC-cccEEEEecCCCcEEEEEeeccccCC-CCcee
Q 020715            3 SALQFNARSESVTEKAS-FRRLLPKSRCLAAVEGFYEWK---KDGSK-KQPYYVHFKDGRPLVFAALYDTWQSS-EGEIL   76 (322)
Q Consensus         3 g~~t~NARsETL~ekp~-Fr~a~~~rRCLVPa~GFYEW~---~~g~k-KqPy~I~~kdg~~f~~AGLwd~w~~~-~Ge~l   76 (322)
                      ++++||||+|||.+||+ ||.+++++||||||+|||||+   ..+++ ||||||++  |.+|+|||||+ |.++ +|+.+
T Consensus        68 ~~~~iNAR~Et~~~kp~~Fr~~~~~~RClVPa~gfyEW~~~~~~~g~~k~p~~i~~--~~~~~~AGlw~-w~~~~~g~~~  144 (231)
T 2bdv_A           68 SFFMINAKLETIERHGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIHG--DAPLLFAGLSA-WRRGAELDEA  144 (231)
T ss_dssp             CCCBCEEEHHHHHTTCTTGGGTTTTCEEEEEEEEEEEEEECSCSSSCCEEEEEEEE--EEEEEEEEEEC-CCTTCCSSGG
T ss_pred             CCcceEeehhhhccCchhhhHHhhcCeEEEEeccEEeccccccCCCCcceEEEEEC--CCceEEEEEeE-ecCCCCCcee
Confidence            57899999999999999 999999999999999999999   77778 99999999  78999999999 9987 78888


Q ss_pred             EEEEEEecCCchhhhhcccCceeecCChhhHhhhcCCCCc-----hHHHHhcCCCCCCCceEeEcCCCCCCCCCCccccc
Q 020715           77 YTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSS-----SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI  151 (322)
Q Consensus        77 ~SftIITt~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~-----~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I  151 (322)
                      .|||||||+||+.|++||+||||||. +++++.||++...     .++ .||+|  .+.|.+|||++.|||++|++|+||
T Consensus       145 ~sftiiTt~an~~~~~iH~RmPviL~-~e~~~~WL~~~~~~~~~~~~~-~ll~p--~~~l~~~pVs~~Vn~~~n~~p~li  220 (231)
T 2bdv_A          145 HGFAIVTNDALGGMVDVHDRRPVALP-PELAREWVDPATPVARAKEIL-RAGLP--ETAFSWYPVRQEVGSSKYQLPDAV  220 (231)
T ss_dssp             GCEEEEECGGGCCSSCTTSCCBCBCC-HHHHHHHHCTTSCHHHHHHHH-TCCCC--GGGCEEEECCSCSCSBTTBCCC--
T ss_pred             eeEEEEecccChhhhcccCceeeecC-HHHHHHhcCCCCCCcchhhHH-HhcCC--cccEEEEECCCcCCCcCCCChHHh
Confidence            99999999999999999999999997 8999999999764     446 89999  678999999999999999999999


Q ss_pred             cccc
Q 020715          152 KEIP  155 (322)
Q Consensus       152 ~Pi~  155 (322)
                      +|+.
T Consensus       221 ~p~~  224 (231)
T 2bdv_A          221 DPLL  224 (231)
T ss_dssp             ----
T ss_pred             hhhh
Confidence            9986

>1zn6_A Phage-related conserved hypothetical protein; novel, structural genomics, PSI; 1.80A {Bordetella bronchiseptica} SCOP: d.303.1.1

Probab=100.00  E-value=3.4e-43  Score=322.23  Aligned_cols=133  Identities=30%  Similarity=0.514  Sum_probs=122.9

Q ss_pred             CCceeeeecCCccCChhhhhhcCC-CeeEEeecceee--eecCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEE
Q 020715            3 SALQFNARSESVTEKASFRRLLPK-SRCLAAVEGFYE--WKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF   79 (322)
Q Consensus         3 g~~t~NARsETL~ekp~Fr~a~~~-rRCLVPa~GFYE--W~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~Sf   79 (322)
                      ++++||||+|||.+||+||.++++ +||||||+||||  |..  ++||||||+++||++|+|||||+.|.+++|+.+.||
T Consensus        79 ~~~~iNAR~Etv~~kp~Fr~a~~~~~RClVPa~gFyE~~w~~--g~k~p~~i~~~d~~~l~~AGLw~~w~~~~g~~~~sf  156 (227)
T 1zn6_A           79 KKNTSNARSETAHQLWTFRNAWAKAQHCIIPADAIYEPDWRS--GKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSY  156 (227)
T ss_dssp             HSCCSEEETTTTTTSTTTHHHHHTTCEEEEEEEEEEEEECTT--SSCEEEEEEETTSCCEEEEEEEEEEECTTSCEEEEE
T ss_pred             CCcceEecccccccCchHHHHHhhCceEEEEeceeEeecccC--CCccceEEecCCCCcEEEEEEeeeccCCCCCeeeEE
Confidence            467899999999999999999986 999999999999  754  589999999999999999999999999888889999


Q ss_pred             EEEecCCch--hhhhccc-----CceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCC
Q 020715           80 TILTTSSSA--ALQWLHD-----RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA  139 (322)
Q Consensus        80 tIITt~An~--~ls~IHd-----RMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~  139 (322)
                      |||||+||.  .|++||+     ||||||. +++++.||++... ++..||+|++.+.|.+|||+..
T Consensus       157 tiiTt~an~~~~~~~iH~p~~~~RmPviL~-~e~~~~WL~~~~~-~~~~ll~p~p~~~l~~~pV~~~  221 (227)
T 1zn6_A          157 TMLTINADDDPLFRDYHQAGKEKRMVVILP-DGAYGDWLTAPAT-DTRDFLLPYPADRLVAAAVKLE  221 (227)
T ss_dssp             EEEEEECTTCTTGGGCSCTTSCCEEECBCC-GGGHHHHHHCCGG-GHHHHCCCCCGGGEEEEECCC-
T ss_pred             EEEeccCCCCchhhhccCCCCCceeeEEeC-HHHHHHHcCCChH-HHHHHcccCCccccEEEECCHH
Confidence            999999997  9999998     9999997 7899999998764 5889999999999999999875

>2aeg_A Hypothetical protein AGR_PAT_140; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Agrobacterium tumefaciens str} SCOP: d.303.1.1

Probab=100.00  E-value=8.1e-42  Score=320.36  Aligned_cols=139  Identities=20%  Similarity=0.364  Sum_probs=124.8

Q ss_pred             CCceeeeecCCccCChhhhhhc-CCCeeEEeecceeeeec---CCCCccc-EEEEecCCC-cEEEEEeec-cccCC----
Q 020715            3 SALQFNARSESVTEKASFRRLL-PKSRCLAAVEGFYEWKK---DGSKKQP-YYVHFKDGR-PLVFAALYD-TWQSS----   71 (322)
Q Consensus         3 g~~t~NARsETL~ekp~Fr~a~-~~rRCLVPa~GFYEW~~---~g~kKqP-y~I~~kdg~-~f~~AGLwd-~w~~~----   71 (322)
                      +++|||||+   .++|+||.++ +++||||||+|||||..   .+++|+| |||+++|++ +|+|||||+ .|.++    
T Consensus        94 ~~~~~NAR~---~~kp~fr~a~~~~~RCLVPa~GFyEW~~~~~~~g~K~P~~~i~~~d~~pl~~~AGLw~~~w~~~~~~~  170 (268)
T 2aeg_A           94 DRGVTNVRK---LNLPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVR  170 (268)
T ss_dssp             CCCBCEECC---TTCGGGGGGCSGGGEEEEEESEEEEECTTSCCTTSCCCEEEEESSTTCCCEEEEEEEEEEEEECSSGG
T ss_pred             CCcceEEec---CCChHHHHHHhhCCeEEEEccEEEeecCccCCCCCcCccEEEEecCCCceEEEEEEeecccccccccc
Confidence            567899999   7899999999 69999999999999997   6778999 999999998 699999999 99875    


Q ss_pred             CCc-eeEEEEEEecCCchhhhhccc-CceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCC
Q 020715           72 EGE-ILYTFTILTTSSSAALQWLHD-RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSF  145 (322)
Q Consensus        72 ~Ge-~l~SftIITt~An~~ls~IHd-RMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n  145 (322)
                      +|+ .+.|||||||+||+.|++||+ ||||||..+++++.||+++. .++..||+|++.+.|.+|||++.||++..
T Consensus       171 ~g~~~~~sftIiTt~an~~~~~iH~kRMPVIL~~~e~~~~WL~~~~-~~~~~Ll~p~p~~~l~~~pV~~~v~~~~~  245 (268)
T 2aeg_A          171 DGLTTDDLYGFLTTDPNDLVKPIHEKAMPVLLLTREETEIWMRAPW-DEAKHLARPLPNDALIILSREPYGSSIVS  245 (268)
T ss_dssp             GCSEEEEEEEEEEECCCTTTTTTCSSCEECEECSHHHHHHHHHSCH-HHHGGGCSCCCTTSCEEEEEECTTCCCC-
T ss_pred             ccccccceEEEEeCCchHhhhhhCCCceeEEeCCHHHHHHHcCCCh-HHHHHHcCCCCCccEEEEECCccCCCCcc
Confidence            466 589999999999999999999 99999933789999999853 46889999999999999999999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	322
d2aega1	243	d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {	3e-34
d2f20a1	231	d.303.1.1 (A:2-232) Hypothetical protein BT1218 {B	6e-33
d2bdva1	217	d.303.1.1 (A:2-218) Phage-related hypothetical pro	3e-28
d1zn6a1	218	d.303.1.1 (A:2-219) Phage-related hypothetical pro	7e-26

>d2aega1 d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {Agrobacterium tumefaciens [TaxId: 358]} Length = 243

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein Atu5096
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  123 bits (309), Expect = 3e-34
 Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 17/153 (11%)

Query: 3   SALQFNARSESVTEKASFR----RLLPKSRCLAAVEGFYEW-----KKDGSKKQPYYVHF 53
                  R  +   K +          + RCL  V  F E      ++ G+    ++   
Sbjct: 87  LIRMEPDRGVTNVRKLNLPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARD 146

Query: 54  KDGRPLVFAALYDTWQSSE------GEILYTFTILTTSSSAALQWLHDR-MPVILGDKES 106
           +    + FA ++     S             +  LTT  +  ++ +H++ MPV+L  +E 
Sbjct: 147 EAKSLMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTTDPNDLVKPIHEKAMPVLLLTREE 206

Query: 107 SDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 139
           ++ W+          + +P     L+     P 
Sbjct: 207 TEIWMRAPWDEAKH-LARPLPNDALIILSREPY 238

>d2f20a1 d.303.1.1 (A:2-232) Hypothetical protein BT1218 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 231

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein BT1218
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score =  119 bits (299), Expect = 6e-33
 Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 7   FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
            NAR++++ EK SFR  + K RC+    G++EW+ +G+ K PYY++ KD      A +YD
Sbjct: 80  LNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYD 139

Query: 67  TWQSS----EGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGS-SSSKYDT 121
            W       E E     T  T S +  +     RMP I   +E  + WLN S S ++  +
Sbjct: 140 RWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRMPAI-LTQEEEEKWLNPSLSKAEIAS 198

Query: 122 ILKPYEESDLVWYPVTPAMGKLSFDGPECIK 152
           +LKP++   +  Y +     K S + P  ++
Sbjct: 199 LLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQ 229

>d2bdva1 d.303.1.1 (A:2-218) Phage-related hypothetical protein BB2244 {Bordetella bronchiseptica [TaxId: 518]} Length = 217

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB2244
species: Bordetella bronchiseptica [TaxId: 518]

 Score =  106 bits (265), Expect = 3e-28
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 6   QFNARSESVTEKASFRRLLPK-SRCLAAVEGFYEWKKD--GSKKQPYYVHFKDGRPLVFA 62
             NA+ E++       +L+    R L   +G+YEWK    G K      +     PL+FA
Sbjct: 70  MINAKLETIERHGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIHGDAPLLFA 129

Query: 63  ALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKY--D 120
            L    + +E +  + F I+T  +   +  +HDR PV L   E +  W++ ++      +
Sbjct: 130 GLSAWRRGAELDEAHGFAIVTNDALGGMVDVHDRRPVAL-PPELAREWVDPATPVARAKE 188

Query: 121 TILKPYEESDLVWYPVTPAMGKLSFDGPE 149
            +     E+   WYPV   +G   +  P+
Sbjct: 189 ILRAGLPETAFSWYPVRQEVGSSKYQLPD 217

>d1zn6a1 d.303.1.1 (A:2-219) Phage-related hypothetical protein BB1717 {Bordetella bronchiseptica [TaxId: 518]} Length = 218

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB1717
species: Bordetella bronchiseptica [TaxId: 518]

 Score =  100 bits (249), Expect = 7e-26
 Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 10/138 (7%)

Query: 7   FNARSESVTEKASFRRLLPKS-RCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALY 65
            NARSE+  +  +FR    K+  C+   +  YE      K  P      DG PL  A L+
Sbjct: 82  SNARSETAHQLWTFRNAWAKAQHCIIPADAIYEPDWRSGKAVPTRFTRADGAPLGIAGLW 141

Query: 66  DTWQSSEGEILYTFTILTTSSSAA-------LQWLHDRMPVILGDKESSDAWLNGSSSSK 118
           D ++++ GE + ++T+LT ++                RM VIL    +   WL   ++  
Sbjct: 142 DRYRNAAGEWIDSYTMLTINADDDPLFRDYHQAGKEKRMVVIL-PDGAYGDWLTAPATDT 200

Query: 119 YDTILKPYEESDLVWYPV 136
            D  L PY    LV   V
Sbjct: 201 RD-FLLPYPADRLVAAAV 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	322
d2f20a1	231	Hypothetical protein BT1218 {Bacteroides thetaiota	100.0
d2bdva1	217	Phage-related hypothetical protein BB2244 {Bordete	100.0
d1zn6a1	218	Phage-related hypothetical protein BB1717 {Bordete	100.0
d2aega1	243	Hypothetical protein Atu5096 {Agrobacterium tumefa	100.0

>d2f20a1 d.303.1.1 (A:2-232) Hypothetical protein BT1218 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein BT1218
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=100.00  E-value=2.8e-47  Score=347.40  Aligned_cols=149  Identities=34%  Similarity=0.678  Sum_probs=138.6

Q ss_pred             CceeeeecCCccCChhhhhhcCCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCC-CceeEEEEEE
Q 020715            4 ALQFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTIL   82 (322)
Q Consensus         4 ~~t~NARsETL~ekp~Fr~a~~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~-Ge~l~SftII   82 (322)
                      ..+||||+|||.++|+||.+++++||||||+|||||+..+++|+||||+++|+++|+|||||+.|.+.+ |+.+.+|+||
T Consensus        77 ~~~iNAR~Etl~~kp~fr~a~~~~RClIPa~GfyEW~~~~~~k~py~~~~~d~~~~~~AGl~~~~~~~~~g~~~~t~~ii  156 (231)
T d2f20a1          77 KMTLNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSII  156 (231)
T ss_dssp             GGCSEEEGGGTTTCTTTTTHHHHCEEEEEESEEEEEEEETTEEEEEEEEETTCSSEEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred             CcceEeecCccccCHhHHhhhhcCcEEEEeeeEEeecccCCccceeEEeccCCCceEEEEEeecccccccccccceeEEE
Confidence            468999999999999999999999999999999999998899999999999999999999999998864 7888999999


Q ss_pred             ecCCchh---hhhcccCceeecCChhhHhhhcCCCCc-hHHHHhcCCCCCCCceEeEcCCCCCCCCCCccccccc
Q 020715           83 TTSSSAA---LQWLHDRMPVILGDKESSDAWLNGSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKE  153 (322)
Q Consensus        83 Tt~An~~---ls~IHdRMPVIL~~~E~~d~WLdp~~~-~~~~~LL~p~~~~~L~~yPVs~~Vnn~~n~~pe~I~P  153 (322)
                      |+.+++.   |++|||||||||. +++++.||+++.+ .++..||+|++.+.|.+|||++.||+++||+|+||++
T Consensus       157 T~~a~~~~~~i~~iH~RmPviL~-~~~~~~WL~~~~~~~~~~~ll~~~~~~~l~~~~Vs~~Vn~~~nn~p~lI~~  230 (231)
T d2f20a1         157 TTDTNSLTDYIDNTKHRMPAILT-QEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQR  230 (231)
T ss_dssp             EEECCHHHHHHSTTTCEEECEEC-GGGHHHHTCTTCCHHHHHHTCCCCCGGGEEEEEBCGGGGGSCTTCGGGGCB
T ss_pred             ecccchhhhhhccccCCCceecC-HHHHHHHcCCCCCHHHHHHHhccCCccceEEEECchhhCCCCCCCHHHhcc
Confidence            9999975   5666999999997 7899999999865 4688999999999999999999999999999999987

>d2bdva1 d.303.1.1 (A:2-218) Phage-related hypothetical protein BB2244 {Bordetella bronchiseptica [TaxId: 518]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB2244
species: Bordetella bronchiseptica [TaxId: 518]

Probab=100.00  E-value=4.5e-44  Score=322.75  Aligned_cols=144  Identities=28%  Similarity=0.573  Sum_probs=127.5

Q ss_pred             CCceeeeecCCccCCh-hhhhhcCCCeeEEeecceeeeecCC----CCcccEEEEecCCCcEEEEEeeccccCCCCceeE
Q 020715            3 SALQFNARSESVTEKA-SFRRLLPKSRCLAAVEGFYEWKKDG----SKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILY   77 (322)
Q Consensus         3 g~~t~NARsETL~ekp-~Fr~a~~~rRCLVPa~GFYEW~~~g----~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~   77 (322)
                      ..++||||+|||.+++ +|+.+++++||||||+|||||+..+    +.|+||||+  ++.+++|||||..|.+.+|+.++
T Consensus        67 ~~~~~NAR~Etl~~k~~~f~~~~~~~RClVP~~gfyEW~~~~~~~~~~k~p~~~~--~~~~~~~ag~~~~~~~~~~~~~~  144 (217)
T d2bdva1          67 SFFMINAKLETIERHGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIH--GDAPLLFAGLSAWRRGAELDEAH  144 (217)
T ss_dssp             CCCBCEEEHHHHHTTCTTGGGTTTTCEEEEEEEEEEEEEECSCSSSCCEEEEEEE--EEEEEEEEEEECCCTTCCSSGGG
T ss_pred             cccccceechhhccCccccccccccceEEEEeeeEEEecccccCCccceeeeeee--ccchhheeeeeeccccccccccc
Confidence            3578999999999998 5999999999999999999998643    357888886  45689999999988888888899


Q ss_pred             EEEEEecCCchhhhhcccCceeecCChhhHhhhcCCCCc-hHHHH-hcCCCCCCCceEeEcCCCCCCCCCCccc
Q 020715           78 TFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSS-SKYDT-ILKPYEESDLVWYPVTPAMGKLSFDGPE  149 (322)
Q Consensus        78 SftIITt~An~~ls~IHdRMPVIL~~~E~~d~WLdp~~~-~~~~~-LL~p~~~~~L~~yPVs~~Vnn~~n~~pe  149 (322)
                      ||||||++|++.|++||+||||||. +++++.|||++.. .++.. |+.|++...|.+|||++.||+++||+||
T Consensus       145 sfailT~~a~~~~~~iH~RmPviL~-~~~~~~WL~~~~~~~~~~~~l~~~~~~~~l~~~pVs~~Vn~~~n~~pe  217 (217)
T d2bdva1         145 GFAIVTNDALGGMVDVHDRRPVALP-PELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPD  217 (217)
T ss_dssp             CEEEEECGGGCCSSCTTSCCBCBCC-HHHHHHHHCTTSCHHHHHHHHTCCCCGGGCEEEECCSCSCSBTTBCCC
T ss_pred             eeEEEeccccchhhhhhcccCEEEC-HHHHHHHcCCCCCHHHHHHHhcCCCCcccEEEEECCchhCCCCCCCCC
Confidence            9999999999999999999999997 7899999999865 34444 5577888899999999999999999986

>d1zn6a1 d.303.1.1 (A:2-219) Phage-related hypothetical protein BB1717 {Bordetella bronchiseptica [TaxId: 518]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB1717
species: Bordetella bronchiseptica [TaxId: 518]

Probab=100.00  E-value=5.8e-43  Score=316.81  Aligned_cols=132  Identities=29%  Similarity=0.448  Sum_probs=121.1

Q ss_pred             CceeeeecCCccCChhhhhhc-CCCeeEEeecceeeeecCCCCcccEEEEecCCCcEEEEEeeccccCCCCceeEEEEEE
Q 020715            4 ALQFNARSESVTEKASFRRLL-PKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTIL   82 (322)
Q Consensus         4 ~~t~NARsETL~ekp~Fr~a~-~~rRCLVPa~GFYEW~~~g~kKqPy~I~~kdg~~f~~AGLwd~w~~~~Ge~l~SftII   82 (322)
                      +.+||||+|||.+||+|++++ ++|||||||+|||||+..+++|+||||+++|+++|+|||||+.|.+++|+.+.|||||
T Consensus        79 ~~~iNAR~Et~~~k~~fr~a~~~~~RClVPa~gfyEw~~~~~~k~p~~i~~~d~~~~~~AGl~~~~~~~~g~~~~s~~il  158 (218)
T d1zn6a1          79 KNTSNARSETAHQLWTFRNAWAKAQHCIIPADAIYEPDWRSGKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSYTML  158 (218)
T ss_dssp             SCCSEEETTTTTTSTTTHHHHHTTCEEEEEEEEEEEEECTTSSCEEEEEEETTSCCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred             cceeecccCccccCchhhhhhhccceEEEEecEEEEcccCCCcceeeeeeecCCcceEEEEEEEeeeCCCCCeeeeEEEE
Confidence            468999999999999999986 7899999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCch--hhhhcc-----cCceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcC
Q 020715           83 TTSSSA--ALQWLH-----DRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVT  137 (322)
Q Consensus        83 Tt~An~--~ls~IH-----dRMPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs  137 (322)
                      |++|+.  .|+.||     +||||||. +++++.||++... ++..||+|++++.|++|||.
T Consensus       159 t~~a~~~~~~~~iH~~~~h~RmPviL~-~~~~~~WL~~~~~-~~~~ll~p~p~~~l~a~pV~  218 (218)
T d1zn6a1         159 TINADDDPLFRDYHQAGKEKRMVVILP-DGAYGDWLTAPAT-DTRDFLLPYPADRLVAAAVK  218 (218)
T ss_dssp             EEECTTCTTGGGCSCTTSCCEEECBCC-GGGHHHHHHCCGG-GHHHHCCCCCGGGEEEEECC
T ss_pred             eecccccchhhhhccccccCCCcEEeC-HHHHHHhCCCCcc-cHHHHcccCCccceEEEEcC
Confidence            997765  566666     79999997 7899999998765 57889999999999999993

>d2aega1 d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein Atu5096
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.8e-37  Score=282.76  Aligned_cols=136  Identities=18%  Similarity=0.340  Sum_probs=112.0

Q ss_pred             eeeecCCccC---Chhhhhhc-CCCeeEEeecceeeeecCC-----CCcccEEEEecCCCcEEEEEeec-cccCC-----
Q 020715            7 FNARSESVTE---KASFRRLL-PKSRCLAAVEGFYEWKKDG-----SKKQPYYVHFKDGRPLVFAALYD-TWQSS-----   71 (322)
Q Consensus         7 ~NARsETL~e---kp~Fr~a~-~~rRCLVPa~GFYEW~~~g-----~kKqPy~I~~kdg~~f~~AGLwd-~w~~~-----   71 (322)
                      +|+|.|+..+   ++.|+.++ .+|||||||+|||||...+     ..++||||+..|+.+|+|||||+ .|.+.     
T Consensus        91 ~~~r~~~~a~~~~~~~~~~~~~~~rRClIPa~gfyEW~~~~~~~~~~~k~p~~i~~~d~~~~~~AGlw~~~w~~~~~~~~  170 (243)
T d2aega1          91 EPDRGVTNVRKLNLPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVRD  170 (243)
T ss_dssp             CCCCCBCEECCTTCGGGGGGCSGGGEEEEEESEEEEECTTSCCTTSCCCEEEEESSTTCCCEEEEEEEEEEEEECSSGGG
T ss_pred             cchhhhhhhcccccHhHhhhhccCCcEEEEeceEEEecccccccCCCCCCCEEEECCCCceeEEeeeeeecccCcccccc
Confidence            4445444433   35566655 4799999999999997532     35789999999999999999996 45432     


Q ss_pred             CCceeEEEEEEecCCchhhhhcccC-ceeecCChhhHhhhcCCCCchHHHHhcCCCCCCCceEeEcCCCCCCC
Q 020715           72 EGEILYTFTILTTSSSAALQWLHDR-MPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKL  143 (322)
Q Consensus        72 ~Ge~l~SftIITt~An~~ls~IHdR-MPVIL~~~E~~d~WLdp~~~~~~~~LL~p~~~~~L~~yPVs~~Vnn~  143 (322)
                      .|+.++||||||++||+.|++|||| |||||.++++++.||+++.. ++..||+|++.+.|.+|+|++.||++
T Consensus       171 ~~~~~~sftIiT~~An~~l~~iHdR~MPvIL~~~e~~~~WL~~~~~-e~~~ll~P~p~~~l~~~~vsp~vn~~  242 (243)
T d2aega1         171 GLTTDDLYGFLTTDPNDLVKPIHEKAMPVLLLTREETEIWMRAPWD-EAKHLARPLPNDALIILSREPYGSSI  242 (243)
T ss_dssp             CSEEEEEEEEEEECCCTTTTTTCSSCEECEECSHHHHHHHHHSCHH-HHGGGCSCCCTTSCEEEEEECTTCCC
T ss_pred             CCcceeEEEEEeccCcHHHHhhcCCCCceEECCHHHHHHHcCCCHH-HHHHHhccCCccceEEEeCCCCccCC
Confidence            3578999999999999999999999 99999547889999998543 68889999999999999999999986