Citrus Sinensis ID: 020766


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQMENMDV
ccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccc
ccccHHHHHHHcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccEEcccc
mdlspgelqflsipdilresisiprraARTFYFITLILIFPLSFAILAHSLfthpilrqledhptydptetrhQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLytskpvsfsstmsaIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIAlhdhlggylgeyvplkssiqmenmdv
mdlspgelqflsipdilreSISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTskpvsfsstmsaipKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGeyvplkssiqmenmdv
MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVflsflilliiaiDTQSAllvlfcmlvifllflvvhvYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIgsvfgvvvvhggDRYGVFTRIvvggflvgvlvivnlvgllvQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQMENMDV
********QFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPL***********
******E*QFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQ*ENM**
MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQMENMDV
**LSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQMENM**
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMSAIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGVVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHLGGYLGEYVPLKSSIQMENMDV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
255565325321 conserved hypothetical protein [Ricinus 1.0 1.0 0.838 1e-148
449454766320 PREDICTED: uncharacterized protein LOC10 0.993 0.996 0.812 1e-142
224134442318 predicted protein [Populus trichocarpa] 0.987 0.996 0.787 1e-140
357502779320 hypothetical protein MTR_7g021620 [Medic 0.996 1.0 0.775 1e-138
357476449320 hypothetical protein MTR_4g096890 [Medic 0.996 1.0 0.763 1e-137
224122638318 predicted protein [Populus trichocarpa] 0.987 0.996 0.781 1e-137
225423654318 PREDICTED: uncharacterized protein LOC10 0.990 1.0 0.781 1e-133
30684945321 uncharacterized protein [Arabidopsis tha 1.0 1.0 0.763 1e-131
297791309321 hypothetical protein ARALYDRAFT_917078 [ 1.0 1.0 0.757 1e-129
15241607321 uncharacterized protein [Arabidopsis tha 1.0 1.0 0.750 1e-128
>gi|255565325|ref|XP_002523654.1| conserved hypothetical protein [Ricinus communis] gi|223537106|gb|EEF38740.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/321 (83%), Positives = 299/321 (93%)

Query: 1   MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQL 60
           MDL+P ELQFL+IPDILRESISIP+R+ + FY ITL LIFPLSFAILAHSLFTHP+L QL
Sbjct: 1   MDLAPEELQFLTIPDILRESISIPKRSPKAFYLITLTLIFPLSFAILAHSLFTHPLLSQL 60

Query: 61  EDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMS 120
           EDHP+ DP++TRH+WT LL+FQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSST+S
Sbjct: 61  EDHPSADPSQTRHEWTLLLIFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTIS 120

Query: 121 AIPKVLKRLFITFLWVSLLMIIYNAVFLSFLILLIIAIDTQSALLVLFCMLVIFLLFLVV 180
           AIPKV KRLF+TFLWVSLLM++YN+VFL FL++L+IAID Q+ LLV+F +LVIFLLFLVV
Sbjct: 121 AIPKVFKRLFVTFLWVSLLMVLYNSVFLVFLVILVIAIDAQNPLLVIFSLLVIFLLFLVV 180

Query: 181 HVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFGV 240
           HVYITALWHLASVVSVLEPLYG AAMKKSYELLKG+ R+A +LVFGYLAIC  IG +FG 
Sbjct: 181 HVYITALWHLASVVSVLEPLYGVAAMKKSYELLKGRIRVAVILVFGYLAICGVIGGIFGS 240

Query: 241 VVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKIALHDHL 300
           VVVHGGD YGVFTRIVVGGFLVGVLVI+NLVGLLVQSVFYYVCKSYHHQ IDKIALH+HL
Sbjct: 241 VVVHGGDSYGVFTRIVVGGFLVGVLVIINLVGLLVQSVFYYVCKSYHHQGIDKIALHEHL 300

Query: 301 GGYLGEYVPLKSSIQMENMDV 321
           GGYLGEYVPLKS+IQMEN+DV
Sbjct: 301 GGYLGEYVPLKSNIQMENLDV 321




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454766|ref|XP_004145125.1| PREDICTED: uncharacterized protein LOC101217213 [Cucumis sativus] gi|449473661|ref|XP_004153945.1| PREDICTED: uncharacterized protein LOC101206734 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224134442|ref|XP_002321825.1| predicted protein [Populus trichocarpa] gi|222868821|gb|EEF05952.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357502779|ref|XP_003621678.1| hypothetical protein MTR_7g021620 [Medicago truncatula] gi|124360801|gb|ABN08773.1| hypothetical protein MtrDRAFT_AC160516g6v2 [Medicago truncatula] gi|217074148|gb|ACJ85434.1| unknown [Medicago truncatula] gi|355496693|gb|AES77896.1| hypothetical protein MTR_7g021620 [Medicago truncatula] gi|388515831|gb|AFK45977.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357476449|ref|XP_003608510.1| hypothetical protein MTR_4g096890 [Medicago truncatula] gi|355509565|gb|AES90707.1| hypothetical protein MTR_4g096890 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224122638|ref|XP_002318888.1| predicted protein [Populus trichocarpa] gi|222859561|gb|EEE97108.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225423654|ref|XP_002276113.1| PREDICTED: uncharacterized protein LOC100252459 isoform 1 [Vitis vinifera] gi|359473069|ref|XP_003631241.1| PREDICTED: uncharacterized protein LOC100252459 isoform 2 [Vitis vinifera] gi|297737990|emb|CBI27191.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30684945|ref|NP_193728.2| uncharacterized protein [Arabidopsis thaliana] gi|50253430|gb|AAT71917.1| At4g19950 [Arabidopsis thaliana] gi|51972070|gb|AAU15139.1| At4g19950 [Arabidopsis thaliana] gi|332658850|gb|AEE84250.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297791309|ref|XP_002863539.1| hypothetical protein ARALYDRAFT_917078 [Arabidopsis lyrata subsp. lyrata] gi|297791311|ref|XP_002863540.1| hypothetical protein ARALYDRAFT_917082 [Arabidopsis lyrata subsp. lyrata] gi|297309374|gb|EFH39798.1| hypothetical protein ARALYDRAFT_917078 [Arabidopsis lyrata subsp. lyrata] gi|297309375|gb|EFH39799.1| hypothetical protein ARALYDRAFT_917082 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15241607|ref|NP_199299.1| uncharacterized protein [Arabidopsis thaliana] gi|2660664|gb|AAC79135.1| unknown protein [Arabidopsis thaliana] gi|10177476|dbj|BAB10867.1| unnamed protein product [Arabidopsis thaliana] gi|21592663|gb|AAM64612.1| unknown [Arabidopsis thaliana] gi|28392933|gb|AAO41902.1| unknown protein [Arabidopsis thaliana] gi|28973591|gb|AAO64120.1| unknown protein [Arabidopsis thaliana] gi|332007786|gb|AED95169.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
TAIR|locus:2119807321 AT4G19950 "AT4G19950" [Arabido 1.0 1.0 0.623 1.5e-97
TAIR|locus:2155307321 AT5G44860 "AT5G44860" [Arabido 1.0 1.0 0.601 8.7e-95
TAIR|locus:2029529321 AT1G31130 "AT1G31130" [Arabido 0.993 0.993 0.591 3.9e-92
TAIR|locus:2007096350 AT1G69430 "AT1G69430" [Arabido 0.395 0.362 0.285 1.3e-09
TAIR|locus:2200590335 AT1G26650 "AT1G26650" [Arabido 0.392 0.376 0.251 3.8e-08
TAIR|locus:2119807 AT4G19950 "AT4G19950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 200/321 (62%), Positives = 222/321 (69%)

Query:     1 MDLSPGELQFLSIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQL 60
             MDL+P ELQFL+   ILRES SIP+ + +TFY ITL LIFPLSFAILAHSLFT PIL Q+
Sbjct:     1 MDLAPEELQFLNKRGILRESTSIPQYSLKTFYLITLTLIFPLSFAILAHSLFTQPILAQI 60

Query:    61 EDHPTYDPTETRHQWTRLLVFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTMS 120
             + +P  D ++ +H+WT LLVFQFCY+IFLFAFSLLSTAAVVFTVASLYT KPVSFSSTMS
Sbjct:    61 DTYPQADQSQLQHEWTVLLVFQFCYIIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTMS 120

Query:   121 AIPKVLKRLFITFLWVSLLMIIYNAVXXXXXXXXXXXXDTQSAXXXXXXXXXXXXXXXXX 180
             AIP VLKRLFITFLWVSLLM+ YN V            D Q+                  
Sbjct:   121 AIPLVLKRLFITFLWVSLLMLAYNTVFLIFLVTLIVAVDLQNVVLAVFSLVVIFVLFLVV 180

Query:   181 XXYITALWHLASVVSVLEPLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIXXXXXX 240
               Y+TALWHLASVVSVLEP+YG AAMKKSYELLKGKT MA  +VF YL  C  I      
Sbjct:   181 HVYMTALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMVFIYLVHCGFIAGVFGA 240

Query:   241 XXXXXXDRYGVFTRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQEIDKIALHDHL 300
                   D YG+F RI                    QSVFYYVCKS+HHQEIDK ALHDHL
Sbjct:   241 VVVRGGDDYGIFARIVAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFHHQEIDKSALHDHL 300

Query:   301 GGYLGEYVPLKSSIQMENMDV 321
             GGYLGEYVPLKS+IQMEN +V
Sbjct:   301 GGYLGEYVPLKSNIQMENFEV 321




GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2155307 AT5G44860 "AT5G44860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029529 AT1G31130 "AT1G31130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007096 AT1G69430 "AT1G69430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200590 AT1G26650 "AT1G26650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00151045
hypothetical protein (319 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
PF06161243 DUF975: Protein of unknown function (DUF975); Inte 99.19
PF10110149 GPDPase_memb: Membrane domain of glycerophosphoryl 99.1
PF06790248 UPF0259: Uncharacterised protein family (UPF0259); 99.04
PRK02868245 hypothetical protein; Provisional 98.75
PF10110149 GPDPase_memb: Membrane domain of glycerophosphoryl 89.44
COG4781340 Membrane domain of membrane-anchored glycerophosph 88.77
PF04515334 Choline_transpo: Plasma-membrane choline transport 84.95
PF13197169 DUF4013: Protein of unknown function (DUF4013) 83.51
>PF06161 DUF975: Protein of unknown function (DUF975); InterPro: IPR010380 This is a family of uncharacterised bacterial proteins Back     alignment and domain information
Probab=99.19  E-value=1.8e-08  Score=91.62  Aligned_cols=230  Identities=17%  Similarity=0.254  Sum_probs=127.1

Q ss_pred             ChHHHHHHhhhhcccChhhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhcCCCCCCCccchhhhHHHHHHHHHHHHHHHH
Q 020766           12 SIPDILRESISIPRRAARTFYFITLILIFPLSFAILAHSLFTHPILRQLEDHPTYDPTETRHQWTRLLVFQFCYLIFLFA   91 (321)
Q Consensus        12 ~~~~Il~ea~~i~~~n~~~f~~l~~~l~lpls~~~l~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   91 (321)
                      +-.|+=++|.+.++.|++....+.+...+..+....        ..+..++.       ..+.....       .+..++
T Consensus         2 ~~kelK~~Ak~~L~gn~~~~vl~~l~~~li~~~~~~--------~~~~~~~~-------~~~~~~~~-------ii~~lv   59 (243)
T PF06161_consen    2 TRKELKRQAKEQLKGNWGKAVLICLLIILISSLISF--------LISIIGSI-------GVSSFISI-------IIVSLV   59 (243)
T ss_pred             CHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH--------HHHHHhHH-------HHHHHHHH-------HHHHHH
Confidence            446788999999999999877776666542222111        00000000       00000000       223333


Q ss_pred             HHHHHHHHHHHHHHHHhcC-CCCchhhhhhhh-hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH-Hhcc---
Q 020766           92 FSLLSTAAVVFTVASLYTS-KPVSFSSTMSAI-PKVLKRLFITFLWVSLLMIIYNAVFLSFLILLI----IA-IDTQ---  161 (321)
Q Consensus        92 ~~ll~~a~i~~av~~~~~G-~~~t~~~~~~~~-~~~~~~ll~T~l~~~li~~a~~~~~~~~~~~~~----~~-~~~~---  161 (321)
                      .+.+..+ ..+..-+.+.| +++++++....- ++++++.+.+.+...+..+....++.+......    .. .+..   
T Consensus        60 ~~~l~~G-~~~~~L~~~r~~~~~~~~d~f~~F~~~~f~k~~~~~ll~~l~~~Lw~ll~~i~~~i~~~~~~~~~~~~~~~~  138 (243)
T PF06161_consen   60 SGPLSAG-YSFFYLDIVRGKEEPSFSDLFYGFKKKRFGKSFLLYLLISLFIFLWSLLFIIGFFIFFISFFIFLVGSMNSR  138 (243)
T ss_pred             HHHHHHH-HHHHHHHHHhCCCCCCHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence            3444444 44555567777 899999998775 467777777777776666555544332221111    11 0111   


Q ss_pred             hhHH-HHHHHHHHHHHHHHHHHHHHHHhhccceeeeeC-CcchhhHhhhhHHhhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 020766          162 SALL-VLFCMLVIFLLFLVVHVYITALWHLASVVSVLE-PLYGFAAMKKSYELLKGKTRMAGVLVFGYLAICAAIGSVFG  239 (321)
Q Consensus       162 ~~~~-~~~~~~l~~~~~~~~~~yl~v~~~la~vvsVlE-~~~g~~Al~rS~~L~rG~~~~~l~l~ll~~l~~~~i~~~~~  239 (321)
                      .... .........+...+..++.....++++-+..-+ |.+..+|+++|+++|||++|+.+.+.+-+--      +   
T Consensus       139 ~~~~~~~~~~~~~~l~~~i~~i~~~~~y~~~~yil~d~~~~~~~~al~~S~~lmkg~k~~~f~l~Lsfig------w---  209 (243)
T PF06161_consen  139 SSIISLLLLLVLLLLLLIIPGIIVSYSYSMVPYILADNPELGAFEALKRSRKLMKGNKWRLFLLDLSFIG------W---  209 (243)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHH------H---
Confidence            1111 111111222333444556666666655543322 2689999999999999999999988875521      1   


Q ss_pred             hhheeccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhHHhhccCcc
Q 020766          240 VVVVHGGDRYGVFTRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYH  287 (321)
Q Consensus       240 ~~v~~~~~~~g~~~~~~~g~v~~~l~~~~~l~~~vv~tV~Y~~CK~~~  287 (321)
                                    ..+..+.+....-.+.|+..++++.||.|+|+|+
T Consensus       210 --------------~~L~~~t~gi~~l~~~pY~~~~~a~fY~~l~~~~  243 (243)
T PF06161_consen  210 --------------YILGLLTFGIGLLWVIPYINTAQAEFYEELRKRK  243 (243)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                          0110111112223355999999999999999875



>PF10110 GPDPase_memb: Membrane domain of glycerophosphoryl diester phosphodiesterase; InterPro: IPR018476 Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase [] Back     alignment and domain information
>PF06790 UPF0259: Uncharacterised protein family (UPF0259); InterPro: IPR009627 This is a group of proteins of unknown function Back     alignment and domain information
>PRK02868 hypothetical protein; Provisional Back     alignment and domain information
>PF10110 GPDPase_memb: Membrane domain of glycerophosphoryl diester phosphodiesterase; InterPro: IPR018476 Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase [] Back     alignment and domain information
>COG4781 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase [Energy production and conversion] Back     alignment and domain information
>PF04515 Choline_transpo: Plasma-membrane choline transporter; InterPro: IPR007603 This entry represents a family of proteins probably involved in transport through the plasma membrane [] Back     alignment and domain information
>PF13197 DUF4013: Protein of unknown function (DUF4013) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00