Citrus Sinensis ID: 020781

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINATANAD
Secondary Structure (PSIPRED)
ccccccccccHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHccccEEEEcccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccEEccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEcccccHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEEEEcccccccHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHEEEEcccccccccHHHHHHHHHHHHccccEEEEEcccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcHHHccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHccccccHHHccccccccccccccccccccccccccccEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHcccccHEEEEEEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEcccEEEcccHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mdfgpgskknknkkiANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVhdstgtaiysPLRQTIIAMADAAYGAinlethsgahprlgvvddivfhplARASLDEAAWLAKAVAAdigsrfqvPVFLyaaahptgkpldTIRRElgyyrpnsmgnqwagwtmpeilperpnegpiqvspargiamigarpwvalynipimstDVAATRRIARMVSarggglptvqtlglvhgedsTEIACMllepnqvgadRVQNRVEKLAAEegldvekgyftdfspEMIVEKYMNLINATANAD
Flexible Loop (DISEMBL)
mdfgpgskknknkkianqSILVCCKLFISESRNLAALDAIEraarldtetvivnkfedriynrARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYaaahptgkpldTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVsarggglptvQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLaaeegldvekgyfTDFSPEMIVEKYMNLINATANAD
Low Complexity Region (SEG)
MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINATANAD
Disordered region (IsUnstruct)
******************SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEIL********IQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLIN******
Disordered Region (DISOPRED)
*********************VCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYY**************PEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINAT****
Disordered Region (DISEMBL)
*************KIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINATANAD
Disordered Region (DISPRO)
*DFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINA*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINATANAD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
O88618	541	Formimidoyltransferase-cy	yes	no	0.666	0.395	0.300	2e-14
Q91XD4	541	Formimidoyltransferase-cy	yes	no	0.666	0.395	0.300	4e-14
P53603	541	Formimidoyltransferase-cy	yes	no	0.666	0.395	0.296	2e-13
Q54JL3	537	Formimidoyltransferase-cy	yes	no	0.641	0.383	0.275	5e-13
O95954	541	Formimidoyltransferase-cy	yes	no	0.657	0.390	0.292	1e-11
Q9YH58	541	Formimidoyltransferase-cy	yes	no	0.710	0.421	0.267	2e-10

>sp|O88618|FTCD_RAT Formimidoyltransferase-cyclodeaminase OS=Rattus norvegicus GN=Ftcd PE=1 SV=4

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE  N   +DAI +A       V+++       NR  YT V        G
Sbjct: 2   SQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      ++ A  A   I++  H G HPR+G +D   F P+   S+DE    AKA 
Sbjct: 62  A----------LSAARTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAF 111

Query: 139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
              +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct: 112 GQRLAEELNVPVYLYGEAAQMPSRQTLPAIRA--GEYEALPEKLKQAEWV--------PD 161

Query: 197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQ 250
            GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ
Sbjct: 162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220

Query: 251 TLG 253
            +G
Sbjct: 221 GIG 223

Binds and promotes bundling of vimentin filaments originating from the Golgi.
Rattus norvegicus (taxid: 10116)
EC: 4EC: .EC: 3EC: .EC: 1EC: .EC: 4

>sp|Q91XD4|FTCD_MOUSE Formimidoyltransferase-cyclodeaminase OS=Mus musculus GN=Ftcd PE=1 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 101/243 (41%), Gaps = 29/243 (11%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE  N   +DAI RA       V+++       NR  YT V        G
Sbjct: 2   SQLVECVPNFSEGNNQEVIDAISRAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      +  A  A   I++  H G HPR+G +D   F P+   S++E    AKA 
Sbjct: 62  A----------LHAARTASQLIDMSKHKGEHPRMGALDVCPFIPVRGVSMEECVLCAKAF 111

Query: 139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
              +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct: 112 GQRLAEELNVPVYLYGEAAQTPSRQTLPAIRA--GEYEALPEKLKQAEWV--------PD 161

Query: 197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQ 250
            GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ
Sbjct: 162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220

Query: 251 TLG 253
            +G
Sbjct: 221 GIG 223

Binds and promotes bundling of vimentin filaments originating from the Golgi.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

>sp|P53603|FTCD_PIG Formimidoyltransferase-cyclodeaminase OS=Sus scrofa GN=FTCD PE=1 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE +N   +DAI RA       V+++       NR  YT V        G
Sbjct: 2   SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRPEDVVEG 61

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      +  A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct: 62  A----------LNAARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 111

Query: 139 AADIGSRFQVPVFLYAAAHPTG--KPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
              +     VPV+LY  A  T   + L  +R   G Y       + A W         P+
Sbjct: 112 GQRLAEELGVPVYLYGEAARTAGRQSLPALR--AGEYEALPEKLKQAEWA--------PD 161

Query: 197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQ 250
            GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ
Sbjct: 162 FGPSAFVPSWGATVAGARKFLLAFNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQ 220

Query: 251 TLG 253
            +G
Sbjct: 221 AIG 223

Binds and promotes bundling of vimentin filaments originating from the Golgi.

Sus scrofa (taxid: 9823)

EC: 4

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

>sp|Q54JL3|FTCD_DICDI Formimidoyltransferase-cyclodeaminase OS=Dictyostelium discoideum GN=ftcd PE=3 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 19/225 (8%)

Query: 21  LVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTA 80
           LV C    SE R+   +DAI +A R      +++    +  NR  YT V     DS    
Sbjct: 4   LVECVPNFSEGRDQTIIDAISKAIRDTAGCTLLDVDPGKSTNRTVYTFVG--CPDS---- 57

Query: 81  IYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAA 140
               +    I     A+  I++  H G HPR+G +D   F P+   +++E    +K    
Sbjct: 58  ----IVNGAINATKVAFKLIDMTKHHGEHPRMGALDVCPFVPVRNVTMEECVNCSKEFGK 113

Query: 141 DIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPI 200
            I     VP+FLY  A        + R++L   R    G         +    +P+ GP 
Sbjct: 114 RISEEIGVPIFLYEEAST-----QSYRKQLKQIR---QGEYEGLEEKLKEEKWKPDFGPA 165

Query: 201 QVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG 245
           +  P+ G ++ GAR ++  YN+ I+ T   A  RIA  V   G G
Sbjct: 166 KFIPSYGASVTGARSFLIAYNVNILGTKEQA-HRIALNVREAGRG 209

Folate-dependent enzyme, that displays both transferase and deaminase activity. Serves to channel one-carbon units from formiminoglutamate to the folate pool.

Dictyostelium discoideum (taxid: 44689)

EC: 4

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

>sp|O95954|FTCD_HUMAN Formimidoyltransferase-cyclodeaminase OS=Homo sapiens GN=FTCD PE=1 SV=2

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 100/246 (40%), Gaps = 35/246 (14%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLV---SYVVHD 75
           S LV C    SE +N   +DAI  A       V+++       NR  YT V     VV  
Sbjct: 2   SQLVECVPNFSEGKNQEVIDAISGAITQTPGCVLLDVDAGPSTNRTVYTFVGPPECVVEG 61

Query: 76  STGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLA 135
           +             +  A  A   I++  H G HPR+G +D   F P+   S+DE    A
Sbjct: 62  A-------------LNAARVASRLIDMSRHQGEHPRMGALDVCPFIPVRGVSVDECVLCA 108

Query: 136 KAVAADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPE 193
           +A    +     VPV+LY  AA   + + L  IR   G Y       Q A W        
Sbjct: 109 QAFGQRLAEELDVPVYLYGEAARMDSRRTLPAIR--AGEYEALPKKLQQADWA------- 159

Query: 194 RPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLP 247
            P+ GP    P+ G    GAR ++  +NI ++ T   A  RIA  +  +G      G L 
Sbjct: 160 -PDFGPSSFVPSWGATATGARKFLIAFNINLLGTKEQA-HRIALNLREQGRGKDQPGRLK 217

Query: 248 TVQTLG 253
            VQ +G
Sbjct: 218 KVQGIG 223

Binds and promotes bundling of vimentin filaments originating from the Golgi.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

>sp|Q9YH58|FTCD_CHICK Formimidoyltransferase-cyclodeaminase OS=Gallus gallus GN=FTCD PE=2 SV=1

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 30/258 (11%)

Query: 21  LVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTA 80
           LV C    SE  N   ++A+ RA        +++       NR  YT V       T  A
Sbjct: 4   LVECVPNFSEGCNKEVIEALGRAISQTPGCTLLDVDAGASTNRTVYTFVG------TPEA 57

Query: 81  IYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAA 140
           +     +  ++ A  A+  I++  H G HPR+G +D   F P+   S++E    A     
Sbjct: 58  VV----EGALSAARMAWELIDMSRHKGEHPRMGALDVCPFVPVMNISMEECVICAHVFGQ 113

Query: 141 DIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEG 198
            +     VPV+LY  AA   + + L  IR   G Y       +   W         P+ G
Sbjct: 114 RLSEELGVPVYLYGEAARQESRRTLPAIRA--GEYEALPKKLEKPEWV--------PDFG 163

Query: 199 PIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTL 252
           P    P  G  + GAR ++  YNI ++ T   A  RIA  +  +G      G L  VQ +
Sbjct: 164 PPAFVPQWGATVTGARTFLIAYNINLLCTKELA-HRIALNIREQGRGADQPGSLKKVQGI 222

Query: 253 G-LVHGEDSTEIACMLLE 269
           G  +  E+  +++  LL+
Sbjct: 223 GWYLEEENIAQVSTNLLD 240

Binds and promotes bundling of vimentin filaments originating from the Golgi.

Gallus gallus (taxid: 9031)

EC: 4

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
255553875	300	formiminotransferase-cyclodeaminase, put	0.928	0.993	0.855	1e-150
297739270	345	unnamed protein product [Vitis vinifera]	0.975	0.907	0.775	1e-141
225447252	317	PREDICTED: formimidoyltransferase-cyclod	0.975	0.987	0.775	1e-141
224127011	300	predicted protein [Populus trichocarpa]	0.925	0.99	0.794	1e-137
449444392	324	PREDICTED: formimidoyltransferase-cyclod	0.965	0.956	0.713	1e-132
224126753	300	predicted protein [Populus trichocarpa]	0.925	0.99	0.784	1e-131
363807050	318	uncharacterized protein LOC100784302 [Gl	0.978	0.987	0.753	1e-131
125544634	318	hypothetical protein OsI_12376 [Oryza sa	0.956	0.965	0.553	1e-101
115453915	318	Os03g0582000 [Oryza sativa Japonica Grou	0.956	0.965	0.553	1e-101
357121259	320	PREDICTED: formimidoyltransferase-cyclod	0.956	0.959	0.558	1e-100

>gi|255553875|ref|XP_002517978.1| formiminotransferase-cyclodeaminase, putative [Ricinus communis] gi|223542960|gb|EEF44496.1| formiminotransferase-cyclodeaminase, putative [Ricinus communis]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/298 (85%), Positives = 277/298 (92%)

Query: 20  ILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGT 79
           +L+CCKLFISESRN  ALD+IERAARL+ ETVIVNKFEDR YNR RYTLVSYVV DS GT
Sbjct: 1   MLLCCKLFISESRNRTALDSIERAARLNPETVIVNKFEDRAYNRIRYTLVSYVVLDSIGT 60

Query: 80  AIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVA 139
           AIYSPL+QT++ M +AAYGAINLE+H GAHPRLGVVDDIVFHPL+ ASLDEA+WLAKAVA
Sbjct: 61  AIYSPLQQTVLVMVEAAYGAINLESHCGAHPRLGVVDDIVFHPLSWASLDEASWLAKAVA 120

Query: 140 ADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGP 199
           A+IGSRFQVPVFLYAAAH TGK LDTIRRELGYYRPN MGNQWAGWTMP+IL E+P+EGP
Sbjct: 121 AEIGSRFQVPVFLYAAAHSTGKALDTIRRELGYYRPNFMGNQWAGWTMPDILLEKPDEGP 180

Query: 200 IQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGED 259
            QVS ARGI MIGARPWVALYN+PIMSTDV+ATR+IARMVSARGGGLPTVQTLGLVHGED
Sbjct: 181 QQVSRARGITMIGARPWVALYNVPIMSTDVSATRQIARMVSARGGGLPTVQTLGLVHGED 240

Query: 260 STEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINAT 317
           STEIACMLLEPNQ+GADRVQ RVE LAA+EGLD EKGYFTDFSPEMIVEKYMNLI+A+
Sbjct: 241 STEIACMLLEPNQIGADRVQTRVEMLAAQEGLDAEKGYFTDFSPEMIVEKYMNLISAS 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739270|emb|CBI28921.3| unnamed protein product [Vitis vinifera]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/316 (77%), Positives = 276/316 (87%), Gaps = 3/316 (0%)

Query: 1   MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRI 60
           MD  PG K   +KK   QS+L+CCKL+ISESRN  ALD+IERAARLD ETVIVNKF+DR 
Sbjct: 29  MDLNPGCK---DKKSIKQSMLLCCKLYISESRNHTALDSIERAARLDGETVIVNKFQDRA 85

Query: 61  YNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVF 120
           YNR  YTLVSY+VHDSTG  IYSPL+QT+++M +AAY AINLE H GAHPRLGVVDDIVF
Sbjct: 86  YNRIGYTLVSYIVHDSTGNIIYSPLQQTLLSMVEAAYEAINLELHHGAHPRLGVVDDIVF 145

Query: 121 HPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGN 180
           HPLARASL+EAAW AK  AADIG++FQVPVFLY AAHP GKPLD IRRELGYYRPN MGN
Sbjct: 146 HPLARASLEEAAWFAKMAAADIGNKFQVPVFLYDAAHPMGKPLDIIRRELGYYRPNFMGN 205

Query: 181 QWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVS 240
           QW+GW MPE+L E+P+EGP  VS ARGI MIGARPWV++YNIPI+STD++A RRIAR VS
Sbjct: 206 QWSGWDMPEVLSEKPDEGPTMVSRARGIVMIGARPWVSMYNIPIVSTDISAARRIARTVS 265

Query: 241 ARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTD 300
           ARGGGLPTVQTLGL HGEDSTEIACMLLEPN++GADRVQN+VE LAA+EGLDVEKGYFTD
Sbjct: 266 ARGGGLPTVQTLGLFHGEDSTEIACMLLEPNRIGADRVQNQVEMLAAQEGLDVEKGYFTD 325

Query: 301 FSPEMIVEKYMNLINA 316
           FSPEMI+EKY+ LI+ 
Sbjct: 326 FSPEMIIEKYLKLISG 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447252|ref|XP_002278962.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Vitis vinifera]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/316 (77%), Positives = 276/316 (87%), Gaps = 3/316 (0%)

Query: 1   MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRI 60
           MD  PG K   +KK   QS+L+CCKL+ISESRN  ALD+IERAARLD ETVIVNKF+DR 
Sbjct: 1   MDLNPGCK---DKKSIKQSMLLCCKLYISESRNHTALDSIERAARLDGETVIVNKFQDRA 57

Query: 61  YNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVF 120
           YNR  YTLVSY+VHDSTG  IYSPL+QT+++M +AAY AINLE H GAHPRLGVVDDIVF
Sbjct: 58  YNRIGYTLVSYIVHDSTGNIIYSPLQQTLLSMVEAAYEAINLELHHGAHPRLGVVDDIVF 117

Query: 121 HPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGN 180
           HPLARASL+EAAW AK  AADIG++FQVPVFLY AAHP GKPLD IRRELGYYRPN MGN
Sbjct: 118 HPLARASLEEAAWFAKMAAADIGNKFQVPVFLYDAAHPMGKPLDIIRRELGYYRPNFMGN 177

Query: 181 QWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVS 240
           QW+GW MPE+L E+P+EGP  VS ARGI MIGARPWV++YNIPI+STD++A RRIAR VS
Sbjct: 178 QWSGWDMPEVLSEKPDEGPTMVSRARGIVMIGARPWVSMYNIPIVSTDISAARRIARTVS 237

Query: 241 ARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTD 300
           ARGGGLPTVQTLGL HGEDSTEIACMLLEPN++GADRVQN+VE LAA+EGLDVEKGYFTD
Sbjct: 238 ARGGGLPTVQTLGLFHGEDSTEIACMLLEPNRIGADRVQNQVEMLAAQEGLDVEKGYFTD 297

Query: 301 FSPEMIVEKYMNLINA 316
           FSPEMI+EKY+ LI+ 
Sbjct: 298 FSPEMIIEKYLKLISG 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127011|ref|XP_002329361.1| predicted protein [Populus trichocarpa] gi|222870411|gb|EEF07542.1| predicted protein [Populus trichocarpa]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 236/297 (79%), Positives = 261/297 (87%)

Query: 20  ILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGT 79
           +LV C L+ISE+RN A LD IERAARLD E+VIVNKFEDR+YNR R+T+VSYVV DSTG+
Sbjct: 1   MLVSCMLYISEARNRAVLDLIERAARLDPESVIVNKFEDRVYNRIRFTIVSYVVVDSTGS 60

Query: 80  AIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVA 139
            IYSPL QT++AM +AAYGAINLE HSGAHPRLGVVDDIVFHPLARASLDEAAWLAK VA
Sbjct: 61  PIYSPLHQTVLAMVEAAYGAINLELHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKTVA 120

Query: 140 ADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGP 199
           ADIGSRFQVPVFLYAAAHPTG+  DTIRRELGYY PN MGNQWAGWT+PEILP  P+EGP
Sbjct: 121 ADIGSRFQVPVFLYAAAHPTGRAPDTIRRELGYYTPNFMGNQWAGWTIPEILPGAPDEGP 180

Query: 200 IQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGED 259
             VS  RGI MIGARPWVALYNIP++ TDV+  R+IARMV AR GGLPTVQ L LVHG+D
Sbjct: 181 THVSRTRGIVMIGARPWVALYNIPVVCTDVSTARQIARMVRARDGGLPTVQALALVHGDD 240

Query: 260 STEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINA 316
           S EIAC+LLEPNQVGA+RVQ  VE LAA+EGL+VEKGYFTDF PEMIVEKYMNLI++
Sbjct: 241 SFEIACILLEPNQVGAERVQAEVEMLAAQEGLEVEKGYFTDFPPEMIVEKYMNLISS 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444392|ref|XP_004139959.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Cucumis sativus] gi|449475735|ref|XP_004154537.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Cucumis sativus]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 222/311 (71%), Positives = 264/311 (84%), Gaps = 1/311 (0%)

Query: 7   SKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARY 66
           + K+K + + +Q +L+CCK ++SESRN + L+AIE AAR D ++VIVNKFED  YNR RY
Sbjct: 6   TAKDKKRSL-DQKVLLCCKYYVSESRNRSVLEAIEGAAREDPDSVIVNKFEDGAYNRTRY 64

Query: 67  TLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARA 126
           T+VSYVVHD+TG AIYSPL QT+++M   A+  INLE+HSG HPRLGVVDDIVFHPLARA
Sbjct: 65  TIVSYVVHDTTGNAIYSPLLQTVLSMTQVAFSHINLESHSGTHPRLGVVDDIVFHPLARA 124

Query: 127 SLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWT 186
           SL EAAWLAKAVA DI + FQVPVFLY+AAHP+GK  D +RRELGY+RPN  GNQWAGW+
Sbjct: 125 SLHEAAWLAKAVAKDIAAMFQVPVFLYSAAHPSGKAPDDLRRELGYFRPNYKGNQWAGWS 184

Query: 187 MPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGL 246
           MPE LPE P+EGP  VS  RGI MIGARPW A+YNIPI+STDV+ATRRIARMVS RGGGL
Sbjct: 185 MPETLPENPDEGPNTVSRERGITMIGARPWTAMYNIPILSTDVSATRRIARMVSGRGGGL 244

Query: 247 PTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMI 306
           PTVQT+GL+H +++TEIAC+LLEPNQVGADRVQ  VE +AA+ GL+VE GYFTD+SPEMI
Sbjct: 245 PTVQTIGLLHDDETTEIACVLLEPNQVGADRVQRHVEIVAAQFGLEVENGYFTDYSPEMI 304

Query: 307 VEKYMNLINAT 317
           VEKY+NLI+ T
Sbjct: 305 VEKYLNLISGT 315

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126753|ref|XP_002319918.1| predicted protein [Populus trichocarpa] gi|222858294|gb|EEE95841.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/297 (78%), Positives = 262/297 (88%)

Query: 20  ILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGT 79
           +L+CC LFISE+RN AALD IER+AR+D E+VIVNKFEDR+YNR R+T+VSYVV DSTG+
Sbjct: 1   MLICCMLFISEARNRAALDLIERSARIDPESVIVNKFEDRVYNRIRFTIVSYVVVDSTGS 60

Query: 80  AIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVA 139
            IYSPL QT++A+ +AAYGAINLE HSGAHPRLGVVDDI FHPLA ASLDEAAWLAKAVA
Sbjct: 61  PIYSPLHQTVLAIVEAAYGAINLELHSGAHPRLGVVDDIAFHPLAEASLDEAAWLAKAVA 120

Query: 140 ADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGP 199
           ADIGSRFQVPVFLYAAAHPTG+  DTIRRELGYYRPN MG+QWAGW +PEILPE P+ GP
Sbjct: 121 ADIGSRFQVPVFLYAAAHPTGRAPDTIRRELGYYRPNFMGSQWAGWNIPEILPENPDHGP 180

Query: 200 IQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGED 259
             VS  RG+ +IGAR WV LYNIPIM TDV+  RRIARMVSARGGGLPTVQ+L L HG+D
Sbjct: 181 NHVSRTRGVTLIGARSWVTLYNIPIMCTDVSTARRIARMVSARGGGLPTVQSLALFHGDD 240

Query: 260 STEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLINA 316
           S EIACMLLEPN++G DRVQ +VE LAA+EGLDVEKGYFTD SPEMIV+KYMNLI+A
Sbjct: 241 SAEIACMLLEPNRIGPDRVQAQVEMLAAQEGLDVEKGYFTDLSPEMIVQKYMNLISA 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807050|ref|NP_001242582.1| uncharacterized protein LOC100784302 [Glycine max] gi|255640979|gb|ACU20769.1| unknown [Glycine max]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/316 (75%), Positives = 264/316 (83%), Gaps = 2/316 (0%)

Query: 1   MDFGPGSKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRI 60
           M+F   + K + KK  +QSIL+CCK F+SESRN A L+AIERAAR + ETVIVN F DR 
Sbjct: 1   MNFNCTANKEQ-KKTVDQSILLCCKFFVSESRNNATLNAIERAARSNPETVIVNMFHDRA 59

Query: 61  YNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVF 120
           YNRARY LVSYV+HD TG  IYSPL QT+IAMA+A + A+NLE H GAHPRLG VDDIVF
Sbjct: 60  YNRARYDLVSYVLHDCTGNPIYSPLHQTVIAMAEATFNAVNLEFHEGAHPRLGAVDDIVF 119

Query: 121 HPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGN 180
           HPL  ASLDEAAWLAKAVAADIG+RF VPVFLYAAAHPTGK LD IRRELGYYRPNS G+
Sbjct: 120 HPLGHASLDEAAWLAKAVAADIGNRFSVPVFLYAAAHPTGKELDAIRRELGYYRPNSRGS 179

Query: 181 QWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVS 240
           QWAGW MPE LP  P+EGP  VS A+GI MIGARPWV LYN+PI+ TDV+  RRIAR VS
Sbjct: 180 QWAGWAMPETLPLSPDEGPNVVSRAKGITMIGARPWVTLYNVPILCTDVSVARRIARKVS 239

Query: 241 ARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTD 300
           ARGGGLPTVQT+ LVH EDSTEIACMLL+  QVGADRVQNRVE LAA+EGLD+E+GYFTD
Sbjct: 240 ARGGGLPTVQTIALVH-EDSTEIACMLLDSKQVGADRVQNRVEMLAAQEGLDIEQGYFTD 298

Query: 301 FSPEMIVEKYMNLINA 316
            SPEMIVEKYM LIN+
Sbjct: 299 ISPEMIVEKYMKLINS 314

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125544634|gb|EAY90773.1| hypothetical protein OsI_12376 [Oryza sativa Indica Group]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/309 (55%), Positives = 231/309 (74%), Gaps = 2/309 (0%)

Query: 7   SKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARY 66
           + K K K    +S ++CCKL+ISES+N   +DAI R  + D E V+++KFED  YNR RY
Sbjct: 7   TDKAKAKLSMLKSKVICCKLYISESQNAKVVDAITRIGQKDPEVVLLSKFEDDHYNRVRY 66

Query: 67  TLVSYVVHD-STGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLAR 125
           TL SY++++ STG   +SP+R+ ++ M + A+  INLETH+G HPR+GV+DD+ FHPL +
Sbjct: 67  TLASYIINENSTGEVKFSPMRRVLLEMIEKAFSTINLETHTGTHPRIGVIDDMSFHPLNQ 126

Query: 126 ASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGW 185
           A++++AA LAK VA+DIG+  QVPVFLY AAHPTGKP+  +RRELGY++PN MG QW G 
Sbjct: 127 ATMEDAAQLAKTVASDIGNFLQVPVFLYGAAHPTGKPVTAVRRELGYFQPNYMGIQWMGQ 186

Query: 186 TMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG 245
            +P+ILP +P+EGP  VS  RG  MIGA P    YN+P++S D+   RRI R V+ RGGG
Sbjct: 187 VLPDILPVKPDEGPDHVSRERGAIMIGAAPLPLSYNVPVLSKDIPTIRRITRRVTGRGGG 246

Query: 246 LPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEM 305
           LPTVQ L L HG+D TEIAC  L+P+ V AD+VQ +VE++AAE+GL+VEKGYFTDFS + 
Sbjct: 247 LPTVQALALSHGDDCTEIAC-FLDPDHVSADQVQQQVEQIAAEQGLEVEKGYFTDFSKDA 305

Query: 306 IVEKYMNLI 314
           ++EKY  ++
Sbjct: 306 MLEKYFKIV 314

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115453915|ref|NP_001050558.1| Os03g0582000 [Oryza sativa Japonica Group] gi|41469312|gb|AAS07168.1| expressed protein [Oryza sativa Japonica Group] gi|108709512|gb|ABF97307.1| formiminotransferase-cyclodeaminase, putative, expressed [Oryza sativa Japonica Group] gi|113549029|dbj|BAF12472.1| Os03g0582000 [Oryza sativa Japonica Group] gi|125586936|gb|EAZ27600.1| hypothetical protein OsJ_11547 [Oryza sativa Japonica Group]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/309 (55%), Positives = 231/309 (74%), Gaps = 2/309 (0%)

Query: 7   SKKNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARY 66
           + K K K    +S ++CCKL+ISES+N   +DAI R  + D E V+++KFED  YNR RY
Sbjct: 7   TDKAKAKLSMLKSKVICCKLYISESQNAKVVDAITRIGQKDPEVVLLSKFEDDHYNRVRY 66

Query: 67  TLVSYVVHD-STGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLAR 125
           TL SY++++ STG   +SP+R+ ++ M + A+  INLETH+G HPR+GV+DD+ FHPL +
Sbjct: 67  TLASYIINENSTGEVKFSPMRRVLLEMIEKAFSTINLETHTGTHPRIGVIDDMSFHPLNQ 126

Query: 126 ASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGW 185
           A++++AA LAK VA+DIG+  QVPVFLY AAHPTGKP+  +RRELGY++PN MG QW G 
Sbjct: 127 ATMEDAAQLAKTVASDIGNFLQVPVFLYGAAHPTGKPVTAVRRELGYFQPNYMGIQWMGQ 186

Query: 186 TMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG 245
            +P+ILP +P+EGP  VS  RG  MIGA P    YN+P++S D+   RRI R V+ RGGG
Sbjct: 187 VLPDILPVKPDEGPDHVSRERGAIMIGAAPLPLNYNVPVLSKDIPTIRRITRRVTGRGGG 246

Query: 246 LPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEM 305
           LPTVQ L L HG+D TEIAC  L+P+ V AD+VQ +VE++AAE+GL+VEKGYFTDFS + 
Sbjct: 247 LPTVQALALSHGDDCTEIAC-FLDPDHVSADQVQQQVEQIAAEQGLEVEKGYFTDFSKDA 305

Query: 306 IVEKYMNLI 314
           ++EKY  ++
Sbjct: 306 MLEKYFKIV 314

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357121259|ref|XP_003562338.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Brachypodium distachyon]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/310 (55%), Positives = 233/310 (75%), Gaps = 3/310 (0%)

Query: 9   KNKNKKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTL 68
           K K K     S ++CCKL+ISES+N   +DAI R  + D E V+++KFED  YNR RYTL
Sbjct: 10  KVKAKLSMMHSKVICCKLYISESQNAMVVDAISRIGQKDPEVVLLSKFEDEYYNRVRYTL 69

Query: 69  VSYVVHDS-TGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARA- 126
           VSY++ +S TG  I+SP+R+ ++AM +AA+  INLE H G HPR+GVVDD+ FHPL++A 
Sbjct: 70  VSYIISNSSTGEVIFSPIRKVLLAMIEAAFSNINLEVHCGTHPRIGVVDDMSFHPLSQAA 129

Query: 127 SLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWT 186
           ++++AA LAK +A+DIG+  QVPVFLYAAAHPTGK +  IRRELGYYRPN  G +WAG  
Sbjct: 130 TMEDAAQLAKLLASDIGNGLQVPVFLYAAAHPTGKSVSAIRRELGYYRPNHKGIKWAGQV 189

Query: 187 MPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGL 246
           +P+ LP +P+EGP QV   RG  M+GA+P+V  YN+PI+  DV   RRI R V+ R GG 
Sbjct: 190 LPDTLPMKPDEGPTQVPRERGATMVGAKPFVESYNVPILCKDVPTVRRITRRVTGRSGGF 249

Query: 247 PTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMI 306
           PTVQ L L HG++ TEIAC LL+P+ VGA++VQ  VE++AAE+GL+V+KGYFTD S +M+
Sbjct: 250 PTVQALALFHGDNCTEIAC-LLDPDHVGAEQVQWLVEQIAAEQGLEVDKGYFTDLSKDMM 308

Query: 307 VEKYMNLINA 316
           +E+Y  +++A
Sbjct: 309 LERYFKMVSA 318

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2051415	431	AT2G20830 [Arabidopsis thalian	0.912	0.679	0.506	3.4e-77
UNIPROTKB|E1BL83	328	LOC613365 "Uncharacterized pro	0.676	0.661	0.302	7.8e-18
UNIPROTKB|F1SI74	328	F1SI74 "Uncharacterized protei	0.682	0.667	0.308	6.9e-17
ZFIN|ZDB-GENE-060929-820	328	zgc:153901 "zgc:153901" [Danio	0.691	0.676	0.282	6.9e-17
TIGR_CMR|CHY_0695	305	CHY_0695 "glutamate formiminot	0.766	0.806	0.283	1.1e-13
UNIPROTKB|I3LDH7	541	FTCD "Glutamate formimidoyltra	0.791	0.469	0.292	9.9e-13
UNIPROTKB|P53603	541	FTCD "Formimidoyltransferase-c	0.791	0.469	0.292	9.9e-13
RGD|70915	541	Ftcd "formiminotransferase cyc	0.791	0.469	0.281	2.2e-12
MGI|MGI:1339962	541	Ftcd "formiminotransferase cyc	0.791	0.469	0.285	3.8e-12
ZFIN|ZDB-GENE-030131-9643	550	ftcd "formiminotransferase cyc	0.644	0.376	0.292	2.6e-11

TAIR|locus:2051415 AT2G20830 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 151/298 (50%), Positives = 207/298 (69%)

Query:    18 QSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDST 77
             + +L CCK++ISE+RN  AL+AIERA +      IVNKFED  Y R  YT+VS + + S+
Sbjct:   137 REMLGCCKVYISEARNKTALEAIERALKPFPPAAIVNKFEDAAYGRVGYTVVSSLANGSS 196

Query:    78 GTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKA 137
                  S L+  + AM   A   INLE H G+HPRLGVVD I FHPL++ S+++ + +A +
Sbjct:   197 -----SSLKNAVFAMVKTALDTINLELHCGSHPRLGVVDHICFHPLSQTSIEQVSSVANS 251

Query:   138 VAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNE 197
             +A DIGS  +VP +LY AA      LD+IRR+LGY++ N  G++WAG    E++P +P+ 
Sbjct:   252 LAMDIGSILRVPTYLYGAAEKEQCTLDSIRRKLGYFKANREGHEWAGGFDLEMVPLKPDA 311

Query:   198 GPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHG 257
             GP +VS A+G+  +GA  WV+ YN+P+MS D+ A RRIAR  S RGGGL +VQT+ LVHG
Sbjct:   312 GPQEVSKAKGVVAVGACGWVSNYNVPVMSNDLKAVRRIARKTSERGGGLASVQTMALVHG 371

Query:   258 EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLIN 315
             E   E+AC LL P+QVG D VQ  +E+L  EEGL V KGY+TD++P+ IVE+YM+L+N
Sbjct:   372 EGVIEVACNLLNPSQVGGDEVQGLIERLGREEGLLVGKGYYTDYTPDQIVERYMDLLN 429

GO:0005542 "folic acid binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1BL83 LOC613365 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 219 (82.2 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
 Identities = 78/258 (30%), Positives = 124/258 (48%)

Query:    21 LVCCKLFISESRNLAALDAIERAARLDT------ETVIVNKFEDRIYNRARYTLVSYVVH 74
             L  C L ISE+R  + ++ I +AA L+       E  ++N F D  YNR+  T+ + +  
Sbjct:    10 LAACLLNISEARKKSIVENIAKAALLERNGQRHPEVSVLNVFSDPEYNRSVITIAASI-- 67

Query:    75 DSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWL 134
             D  G ++        +A    A+ +I++E   G HP LG VD I  +PL+   ++E   +
Sbjct:    68 DELGNSV--------LAACLEAFQSIDMEVQEGIHPCLGAVDLIPIYPLSGVGVEECGAV 119

Query:   135 AKAVAADIGSRFQVP---VFLYAAAH-PTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEI 190
             A+++A ++     VP   VFL+  A  P  +PL   R++LG++            T+   
Sbjct:   120 ARSLAENLV--LSVPGCSVFLFGEADLPEKRPLVQRRKQLGWFTRRDFS------TL--- 168

Query:   191 LPERPNEGPIQVSPAR--GIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG-GGLP 247
                   +  +  +PAR  G+  IGA P+V   N+ I S D+A  + IA  +      GL 
Sbjct:   169 ------KSDLGAAPARRCGLTGIGASPYVMNCNVTIDSQDLALGKEIASAIRGSNVNGLK 222

Query:   248 TVQTLGLVHGEDSTEIAC 265
              VQT+   H E   EIAC
Sbjct:   223 GVQTMAFPH-EGKIEIAC 239

GO:0016740 "transferase activity" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

UNIPROTKB|F1SI74 F1SI74 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 220 (82.5 bits), Expect = 6.9e-17, P = 6.9e-17
 Identities = 79/256 (30%), Positives = 120/256 (46%)

Query:    21 LVCCKLFISESR------NLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVH 74
             L  C L ISE+R      N+A    +ER  +      ++N F D  YNR+  T+   V  
Sbjct:    10 LAACLLNISEARRKYIVENVAKAALLERNGQKHPNVSVLNIFSDHEYNRSVITIAGSV-- 67

Query:    75 DSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWL 134
             D  G         +++A    A+ +I++E   G HP LG VD I F+PL    ++E   +
Sbjct:    68 DELG--------DSVLAACLEAFRSIDMEVQDGIHPCLGAVDLIPFYPLCGVGVEECGAV 119

Query:   135 AKAVAADIGSRFQ-VPVFLYAAAH-PTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILP 192
             A+++A ++  R     VFL+  A  P  +PL   R++LG++            T  +   
Sbjct:   120 ARSLAENLLLRVPGCSVFLFGEADLPEKRPLVQRRKQLGWF------------TRRDFSA 167

Query:   193 ERPNEGPIQVSPAR--GIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG-GGLPTV 249
               P+ G   V+PAR  G+  IGA P+V   N+ I S D+   + IA  +      GL  V
Sbjct:   168 LEPDLG---VAPARKCGLTGIGASPYVMNCNVTIDSQDLDLGKEIASAIRGSNVNGLKGV 224

Query:   250 QTLGLVHGEDSTEIAC 265
             QT+   H +   EIAC
Sbjct:   225 QTMAFPH-QGKIEIAC 239

GO:0016740 "transferase activity" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

ZFIN|ZDB-GENE-060929-820 zgc:153901 "zgc:153901" [Danio rerio (taxid:7955)]

 Score = 220 (82.5 bits), Expect = 6.9e-17, P = 6.9e-17
 Identities = 72/255 (28%), Positives = 121/255 (47%)

Query:    21 LVCCKLFISESRNLAALDAIERAARLDTE------TVIVNKFEDRIYNRARYTLVSYVVH 74
             LV C L ISE+R    ++ + R+A  D +        ++N F D  YNR+  T+V+ +  
Sbjct:    10 LVACLLNISEARRKDLVETVARSAITDIKGEKREGVTVLNIFNDSDYNRSVITVVANI-- 67

Query:    75 DSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLAR-ASLDEAAW 133
                       +R+ +++  + A   I++  H G HP +G VD +  +PL     L +   
Sbjct:    68 --------ELIREAVLSACECACSLIDMSVHEGIHPCMGAVDLVPLYPLGEDVGLQDCGE 119

Query:   134 LAKAVAADIGSRFQ-VPVFLYA-AAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEIL 191
              A+A+A  +  R      FL+  A  P  + L   R+E+G++R            +  + 
Sbjct:   120 EAQALALTLAERVAGTSAFLFGWADSPQHRGLAQRRKEIGWFRK-----------VLNVS 168

Query:   192 PERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMV-SARGGGLPTVQ 250
               +P+ G  Q +   GI  +GA P+V   N+ I + D+A  R +A  +  +  GG+P VQ
Sbjct:   169 NIKPDIGS-QPTRRYGITGVGASPYVMNCNVTIDTQDLALGRSVASAIRESSPGGIPGVQ 227

Query:   251 TLGLVHGEDSTEIAC 265
              + L H E + EIAC
Sbjct:   228 VMALPH-EGAVEIAC 241

GO:0016740 "transferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

TIGR_CMR|CHY_0695 CHY_0695 "glutamate formiminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 195 (73.7 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 77/272 (28%), Positives = 123/272 (45%)

Query:    29 SESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQT 88
             SE R    ++AI    R      ++  F D  +NR   T+V  +     G     PL++ 
Sbjct:    12 SEGRRKEVVEAIVDQVRNVPGVKLIGYFPDADFNR---TVVELI-----GKP--EPLKEA 61

Query:    89 IIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQV 148
             +I MA  A   I++E   G HPR+G  D I   P+   +L+E   LA+ +  ++  R  V
Sbjct:    62 LINMAAKAIELIDMEQQRGNHPRIGAQDTIPIFPMRNITLEECIQLAEEIGVELNKRTGV 121

Query:   149 PVFLYA--AAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPER-PNEGPIQVSPA 205
             P+F     A  P  K LD IR+  G Y    + +       P+  P+R P+ G ++    
Sbjct:   122 PIFFSGENARIPERKALDFIRK--GQYE--GLRDLLLSEN-PD--PKRLPDIGDVKEFVH 174

Query:   206 RG--IAMIGARPWVALYNIPIMSTD-VAATRRIARMVSARGGGLPTVQTLGLVHGEDSTE 262
             +G  I   G  P VA +N+ I+ TD +   ++IA+ V    GG  +V+ + L   E +  
Sbjct:   175 KGGTIVSAGTNPLVA-FNV-ILGTDNLEIAKQIAKAVRGPSGGFTSVRAVALKFTERNQV 232

Query:   263 IACM-LLEPNQVGADRVQNRVEKLAAEEGLDV 293
             +  M + +       R  N V+  AA  G+ V
Sbjct:   233 VVSMNMFDHEACPLYRTYNFVKSEAARWGVPV 264

GO:0030409 "glutamate formimidoyltransferase activity" evidence=ISS

GO:0030412 "formimidoyltetrahydrofolate cyclodeaminase activity" evidence=ISS

UNIPROTKB|I3LDH7 FTCD "Glutamate formimidoyltransferase" [Sus scrofa (taxid:9823)]

 Score = 194 (73.4 bits), Expect = 9.9e-13, P = 9.9e-13
 Identities = 83/284 (29%), Positives = 120/284 (42%)

Query:    19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
             S LV C    SE +N   +DAI RA       V+++       NR  YT V     D   
Sbjct:     2 SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRP-EDVVE 60

Query:    79 TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
              A+ +         A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct:    61 GALNA---------ARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 111

Query:   139 AADIGSRFQVPVFLYA-AAHPTGKP-LDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
                +     VPV+LY  AA   G+  L  +R   G Y       + A W         P+
Sbjct:   112 GQRLAEELGVPVYLYGEAARTAGRQSLPALRA--GEYEALPEKLKQAEWA--------PD 161

Query:   197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG------LPTVQ 250
              GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G G      L  VQ
Sbjct:   162 FGPSAFVPSWGATVAGARKFLLAFNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQ 220

Query:   251 TLGLVHGEDS-TEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 293
              +G    E +  +++  LL+    G   V     + A E  L V
Sbjct:   221 AIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPV 264

GO:0030412 "formimidoyltetrahydrofolate cyclodeaminase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

UNIPROTKB|P53603 FTCD "Formimidoyltransferase-cyclodeaminase" [Sus scrofa (taxid:9823)]

 Score = 194 (73.4 bits), Expect = 9.9e-13, P = 9.9e-13
 Identities = 83/284 (29%), Positives = 120/284 (42%)

Query:    19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
             S LV C    SE +N   +DAI RA       V+++       NR  YT V     D   
Sbjct:     2 SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRP-EDVVE 60

Query:    79 TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
              A+ +         A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct:    61 GALNA---------ARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 111

Query:   139 AADIGSRFQVPVFLYA-AAHPTGKP-LDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
                +     VPV+LY  AA   G+  L  +R   G Y       + A W         P+
Sbjct:   112 GQRLAEELGVPVYLYGEAARTAGRQSLPALRA--GEYEALPEKLKQAEWA--------PD 161

Query:   197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG------LPTVQ 250
              GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G G      L  VQ
Sbjct:   162 FGPSAFVPSWGATVAGARKFLLAFNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQ 220

Query:   251 TLGLVHGEDS-TEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 293
              +G    E +  +++  LL+    G   V     + A E  L V
Sbjct:   221 AIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPV 264

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0019557 "histidine catabolic process to glutamate and formate" evidence=IEA

GO:0019556 "histidine catabolic process to glutamate and formamide" evidence=IEA

GO:0005814 "centriole" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0030412 "formimidoyltetrahydrofolate cyclodeaminase activity" evidence=IEA

GO:0030409 "glutamate formimidoyltransferase activity" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

RGD|70915 Ftcd "formiminotransferase cyclodeaminase" [Rattus norvegicus (taxid:10116)]

 Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 80/284 (28%), Positives = 117/284 (41%)

Query:    19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
             S LV C    SE  N   +DAI +A       V+++       NR  YT V        G
Sbjct:     2 SQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61

Query:    79 TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                        ++ A  A   I++  H G HPR+G +D   F P+   S+DE    AKA 
Sbjct:    62 A----------LSAARTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAF 111

Query:   139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
                +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct:   112 GQRLAEELNVPVYLYGEAAQMPSRQTLPAIRA--GEYEALPEKLKQAEWV--------PD 161

Query:   197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG------LPTVQ 250
              GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G G      L  VQ
Sbjct:   162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220

Query:   251 TLG-LVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 293
              +G  +  ++  +++  LL+        V     + A E  L V
Sbjct:   221 GIGWYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPV 264

GO:0005542 "folic acid binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISO;IDA

GO:0005814 "centriole" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0019215 "intermediate filament binding" evidence=TAS

GO:0019556 "histidine catabolic process to glutamate and formamide" evidence=IEA

GO:0019557 "histidine catabolic process to glutamate and formate" evidence=IEA

GO:0030409 "glutamate formimidoyltransferase activity" evidence=TAS

GO:0030412 "formimidoyltetrahydrofolate cyclodeaminase activity" evidence=ISO;TAS

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

MGI|MGI:1339962 Ftcd "formiminotransferase cyclodeaminase" [Mus musculus (taxid:10090)]

 Score = 189 (71.6 bits), Expect = 3.8e-12, P = 3.8e-12
 Identities = 81/284 (28%), Positives = 119/284 (41%)

Query:    19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
             S LV C    SE  N   +DAI RA       V+++       NR  YT V        G
Sbjct:     2 SQLVECVPNFSEGNNQEVIDAISRAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61

Query:    79 TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
              A+++         A  A   I++  H G HPR+G +D   F P+   S++E    AKA 
Sbjct:    62 -ALHA---------ARTASQLIDMSKHKGEHPRMGALDVCPFIPVRGVSMEECVLCAKAF 111

Query:   139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
                +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct:   112 GQRLAEELNVPVYLYGEAAQTPSRQTLPAIRA--GEYEALPEKLKQAEWV--------PD 161

Query:   197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGG------LPTVQ 250
              GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G G      L  VQ
Sbjct:   162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220

Query:   251 TLG-LVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 293
              +G  +  ++  +++  LL+        V     + A E  L V
Sbjct:   221 GIGWYLEEKNLAQVSTNLLDFEVTALHTVFEEARREAQELNLPV 264

GO:0003824 "catalytic activity" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006547 "histidine metabolic process" evidence=IEA

GO:0006548 "histidine catabolic process" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030409 "glutamate formimidoyltransferase activity" evidence=TAS

GO:0030412 "formimidoyltetrahydrofolate cyclodeaminase activity" evidence=TAS

GO:0044237 "cellular metabolic process" evidence=IEA

ZFIN|ZDB-GENE-030131-9643 ftcd "formiminotransferase cyclodeaminase" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 69/236 (29%), Positives = 102/236 (43%)

Query:    13 KKIANQSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYV 72
             K +A  + LV C    SE RN   +DAI  A        +++       NR  YT V   
Sbjct:     6 KALAVMAKLVECVPNFSEGRNKEVIDAIANAISATEGCSLLDVDPGSSTNRTVYTFVG-- 63

Query:    73 VHDSTGTAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAA 132
                S  T I   L       A  A+  I++  HSG HPR G +D   F P+   +++E  
Sbjct:    64 ---SPTTVIEGALNA-----ARVAFKLIDMTKHSGEHPRTGAMDVCPFIPVQNVTMEECV 115

Query:   133 WLAKAVAADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYR--PNSMG-NQWAGWTM 187
               A      +     VPV+LY  AA   + + L ++R   G Y   P+ +  ++WA    
Sbjct:   116 QCANEFGQRLADMLHVPVYLYGEAARKESRRSLPSVRA--GEYEALPDKLKKSEWA---- 169

Query:   188 PEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG 243
             PE        GP    P+ G  + GAR ++  YN+ ++ST   A  RIA  +  +G
Sbjct:   170 PEF-------GPATFVPSWGATVTGARKFLVAYNVNLLSTKEQA-HRIALDIREQG 217

GO:0016740 "transferase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
pfam07837	178	pfam07837, FTCD_N, Formiminotransferase domain, N-	2e-55
TIGR02024	298	TIGR02024, FtcD, glutamate formiminotransferase	4e-26
COG3643	302	COG3643, COG3643, Glutamate formiminotransferase [	4e-26

>gnl|CDD|191867 pfam07837, FTCD_N, Formiminotransferase domain, N-terminal subdomain

 Score =  178 bits (453), Expect = 2e-55
 Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 24/198 (12%)

Query: 21  LVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTA 80
           LV C    SE RN   ++AI  A R      +++   D  +NR+  T V           
Sbjct: 2   LVECVPNFSEGRNKEVIEAIVDAIRAVPGVKLLDYSSDADHNRSVVTFVGEP-------- 53

Query: 81  IYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAA 140
               +++  +     A   I++  H G HPR+G VD I F PL   +++E   LAK +  
Sbjct: 54  --EAVKEAALEAIKKAAELIDMRKHKGEHPRMGAVDVIPFIPLKNVTMEECVELAKELGK 111

Query: 141 DIGSRFQVPVFLY--AAAHPTGKPLDTIRR-ELGYYRPNSMGNQWAGWTMPEILPERPNE 197
            IG    VPV+LY  AA  P  + L  IR+ E    +      +W            P+ 
Sbjct: 112 RIGEELGVPVYLYEEAATRPERRNLAAIRKGEYEGLKEKIKDPEWK-----------PDF 160

Query: 198 GPIQVSPARGIAMIGARP 215
           GP +  P  G   +GAR 
Sbjct: 161 GPAEFHPTAGATAVGARM 178

The formiminotransferase (FT) domain of formiminotransferase- cyclodeaminase (FTCD) forms a homodimer, and each protomer comprises two subdomains. The N-terminal subdomain is made up of a six-stranded mixed beta-pleated sheet and five alpha helices, which are arranged on the external surface of the beta sheet. This, in turn, faces the beta-sheet of the C-terminal subdomain to form a double beta-sheet layer. The two subdomains are separated by a short linker sequence, which is not thought to be any more flexible than the remainder of the molecule. The substrate is predicted to form a number of contacts with residues found in both the N-terminal and C-terminal subdomains. Length = 178

>gnl|CDD|131079 TIGR02024, FtcD, glutamate formiminotransferase

 Score =  104 bits (262), Expect = 4e-26
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 36/243 (14%)

Query: 21  LVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTA 80
           LV C    SE RN   ++ I  A        +++   D  +NR+  T V     +     
Sbjct: 4   LVECVPNFSEGRNKEVIEKIVDAIIKTDNVKLLDVDMDPDHNRSVITFVG----EP---- 55

Query: 81  IYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAA 140
               +    + +A  A   I++  H G HPR+G  D I F P+   +++E   LAK    
Sbjct: 56  --ECVVNAALKLAKKAAELIDMRNHKGEHPRMGAADVIPFIPVRNVTMEECVELAKEFGK 113

Query: 141 DIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPER---- 194
            +G    VPV+LY  AA  P  + L  IR+  G Y               E L E+    
Sbjct: 114 RLGEELGVPVYLYEEAATRPERQTLAAIRK--GQY---------------EALFEKIKDP 156

Query: 195 ---PNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQT 251
              P+ GP + +P  G    GAR ++  +N+ + ++++   ++IA+ +  +GGGL  V+ 
Sbjct: 157 KWKPDFGPSEFNPKAGATATGARKFLIAFNVNLGTSNLEIAKKIAKAIRFQGGGLRFVKA 216

Query: 252 LGL 254
           +GL
Sbjct: 217 IGL 219

This model represents the tetrahydrofolate (THF) dependent glutamate formiminotransferase involved in the histidine utilization pathway. This enzyme interconverts L-glutamate and N-formimino-L-glutamate. The enzyme is bifunctional as it also catalyzes the cyclodeaminase reaction on N-formimino-THF, converting it to 5,10-methenyl-THF and releasing ammonia - part of the process of regenerating THF. This model covers enzymes from metazoa as well as gram-positive bacteria and archaea. In humans, deficiency of this enzyme results in a disease phenotype. The crystal structure of the enzyme has been studied in the context of the catalytic mechanism [Energy metabolism, Amino acids and amines]. Length = 298

>gnl|CDD|226169 COG3643, COG3643, Glutamate formiminotransferase [Amino acid transport and metabolism]

 Score =  104 bits (262), Expect = 4e-26
 Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 28/239 (11%)

Query: 21  LVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTA 80
           +V C    SE R+L  ++ I  AA+      I++   D  +NR   ++++ V   S    
Sbjct: 4   IVECVPNFSEGRDLEKIEKIVAAAKSIPTVKILDVEMDANHNR---SVITLVGDPSK--- 57

Query: 81  IYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAA 140
               +     A+   A   I++  H G HPR+G  D I F PL   + +E   ++K +  
Sbjct: 58  ----VVNAAFALIKKAAELIDMRNHKGEHPRMGAADVIPFVPLKDTTTEECVEISKELGK 113

Query: 141 DIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPE---RP 195
            +G    +PV+LY  AA  P  + L  IR+            Q+ G  + E + E    P
Sbjct: 114 RVGEELGIPVYLYEDAATRPERQNLADIRK-----------GQYEG--LKEKIKEPKWAP 160

Query: 196 NEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGL 254
           + GP +V P  G+  IGAR  +  +N+ + ++++   ++IA+ +    GGL  V+ + +
Sbjct: 161 DFGPREVHPTAGVTAIGARMPLIAFNVNLDTSNMEIGKKIAKAIRFSSGGLRFVKAIAV 219

Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
TIGR02024	298	FtcD glutamate formiminotransferase. This model co	100.0
COG3643	302	Glutamate formiminotransferase [Amino acid transpo	100.0
PF07837	178	FTCD_N: Formiminotransferase domain, N-terminal su	100.0
PF02971	145	FTCD: Formiminotransferase domain; InterPro: IPR01	99.97

>TIGR02024 FtcD glutamate formiminotransferase

Probab=100.00  E-value=2.3e-114  Score=820.66  Aligned_cols=274  Identities=26%  Similarity=0.407  Sum_probs=265.5

Q ss_pred             cccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHH
Q 020781           18 QSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAY   97 (321)
Q Consensus        18 ~~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~   97 (321)
                      |+||+|||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+   |+       +|.+|+|+++++|+
T Consensus         1 m~klveCvpnfSEGR~~~vie~I~~a~~~~~gv~lld~~~D~d~NRsv~Tlvg~---pe-------~v~eaa~~~~~~A~   70 (298)
T TIGR02024         1 MMKLVECVPNFSEGRNKEVIEKIVDAIIKTDNVKLLDVDMDPDHNRSVITFVGE---PE-------CVVNAALKLAKKAA   70 (298)
T ss_pred             CceeEEEeeeeccCCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCceEEEEecC---hH-------HHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999999999999999999995   66       99999999999999


Q ss_pred             HhcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCC
Q 020781           98 GAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRP  175 (321)
Q Consensus        98 elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~  175 (321)
                      ++|||++|+|+|||||||||||||||+++|||||+++|+.+|++||++|+|||||||++  +|+|++|++|||  |    
T Consensus        71 elIDm~~H~G~HPR~GAvDvipf~Pl~~~t~eec~~lA~~vg~~i~~~l~VPVyLY~~aA~~p~r~~La~IRr--G----  144 (298)
T TIGR02024        71 ELIDMRNHKGEHPRMGAADVIPFIPVRNVTMEECVELAKEFGKRLGEELGVPVYLYEEAATRPERQTLAAIRK--G----  144 (298)
T ss_pred             HhcCcccccCCCCCCCccceeeeeeCCCCCHHHHHHHHHHHHHHHHHhhCCCEEEehhhccCCCCCCHHHHhh--h----
Confidence            99999999999999999999999999999999999999999999999999999999644  899999999999  7    


Q ss_pred             CCCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCCCCCCCceEeee
Q 020781          176 NSMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGL  254 (321)
Q Consensus       176 ~~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~gGGL~~VqAmgl  254 (321)
                           ||+|+.++ ++++|+|||||+++||++|+|+||||+||+||||||+|+|+++||+||++||+|||||++||||||
T Consensus       145 -----q~eg~~e~~~~~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNV~L~t~d~~~a~~IAk~vR~~gGGL~~VqAmgl  219 (298)
T TIGR02024       145 -----QYEALFEKIKDPKWKPDFGPSEFNPKAGATATGARKFLIAFNVNLGTSNLEIAKKIAKAIRFQGGGLRFVKAIGL  219 (298)
T ss_pred             -----hhccchhhccCCCCCCCCCCCCCCCCCCeEEEecCCceEEEEEeecCCCHHHHHHHHHHhhhcCCCccceEEeeE
Confidence                 88888888 689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHHH----HHHHH
Q 020781          255 VHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV----EKYMN  312 (321)
Q Consensus       255 ~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il----e~~l~  312 (321)
                      +|+ +|++||||||+||++||+|+|||+|+++|++||++|++||++||+|+++|    |+||+
T Consensus       220 ~~~~~~~vqVsmNl~d~~~t~~~~v~e~v~~~A~~~Gv~V~gse~vGl~P~~al~~~~~~yl~  282 (298)
T TIGR02024       220 YLEEKNLVQVSMNLTNYEKTPLYRVFELIKMEAQRYGVPVVGSELVGLVPLKALLDVAAYYLR  282 (298)
T ss_pred             eecCCCeEEEEeeccCCccCCHHHHHHHHHHHHHHhCCCccccEEecCcHHHHHHHHHHHHhc
Confidence            997 79999999999999999999999999999999999999999999999988    88876

This model covers enzymes from metazoa as well as gram-positive bacteria and archaea. In humans, deficiency of this enzyme results in a disease phenotype. The crystal structure of the enzyme has been studied in the context of the catalytic mechanism.

>COG3643 Glutamate formiminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.1e-106  Score=744.55  Aligned_cols=274  Identities=26%  Similarity=0.417  Sum_probs=262.4

Q ss_pred             cccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHH
Q 020781           18 QSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAY   97 (321)
Q Consensus        18 ~~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~   97 (321)
                      |++||||+||||||||+++||.|++++++.|+|+|||+.+|++||||||||+|   +|+       .+.+|+|++++.|.
T Consensus         1 m~kivecvpNfSEG~~~~~ie~i~a~~~~~~~v~ildve~danhNRsViT~vg---dp~-------~~~~A~f~~ik~Aa   70 (302)
T COG3643           1 MMKIVECVPNFSEGRDLEKIEKIVAAAKSIPTVKILDVEMDANHNRSVITLVG---DPS-------KVVNAAFALIKKAA   70 (302)
T ss_pred             CccceeeccCccccccHHHHHHHHHHHhcCCceEEEEeccCCCCCceEEEEec---ChH-------HHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999   466       89999999999999


Q ss_pred             HhcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCC
Q 020781           98 GAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRP  175 (321)
Q Consensus        98 elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~  175 (321)
                      ++|||++|+|+||||||+|||||+||.++|||||+++||.+|+++|++||||||||+++  +|+|++|++|||  |    
T Consensus        71 elIDM~~H~GeHpRmGA~DViPfvPl~d~tteecveiske~gkrvgeelgiPVylYe~aatrp~R~~La~IRk--g----  144 (302)
T COG3643          71 ELIDMRNHKGEHPRMGAADVIPFVPLKDTTTEECVEISKELGKRVGEELGIPVYLYEDAATRPERQNLADIRK--G----  144 (302)
T ss_pred             HhhchhccCCCCCCCCccceeceeecccccHHHHHHHHHHHHHHhhHhhCCcEEEehhhccCcccccHHHHhh--h----
Confidence            99999999999999999999999999999999999999999999999999999999976  899999999999  8    


Q ss_pred             CCCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCCCCCCCceEeee
Q 020781          176 NSMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGL  254 (321)
Q Consensus       176 ~~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~gGGL~~VqAmgl  254 (321)
                           ||||+.++ +++.|+|||||+++||++|+|+||||.|||||||||+|+|++|+++||++||.++|||++|||+|+
T Consensus       145 -----qyE~l~ekikep~WaPDfGp~~~~PtaG~t~iGaR~pLiAfNvNL~t~n~eI~kkIakaiR~s~GG~~~vkAi~~  219 (302)
T COG3643         145 -----QYEGLKEKIKEPKWAPDFGPREVHPTAGVTAIGARMPLIAFNVNLDTSNMEIGKKIAKAIRFSSGGLRFVKAIAV  219 (302)
T ss_pred             -----hhhhHHHHhcCcccCCCCCccccCCCCcceEeecccceEEEEeccCcccchHHHHHHHHHhhcCCCeeeeeeeee
Confidence                 77788888 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHH----HHHHHH
Q 020781          255 VHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMI----VEKYMN  312 (321)
Q Consensus       255 ~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~i----le~~l~  312 (321)
                      .+. ++++||||||+||++||+||+||+|+.+|.||||.|+++.++|+.|.|-    +++||+
T Consensus       220 ~L~dk~~vQVSMN~~ny~KtpiyR~fEtiK~EA~Rygv~vv~sEivGl~P~~aL~d~~~yYL~  282 (302)
T COG3643         220 ELKDKGIVQVSMNMTNYEKTPIYRVFETIKMEANRYGVNVVGSEIVGLVPEQALIDVAKYYLQ  282 (302)
T ss_pred             eeccCCeEEEEEeecccccCcHHHHHHHHHHHHHhcCCCcccceEeccchHHHHHHHHHHHHh
Confidence            964 8999999999999999999999999999999999999998888888753    445554

>PF07837 FTCD_N: Formiminotransferase domain, N-terminal subdomain; InterPro: IPR012886 The formiminotransferase (FT) domain of formiminotransferase-cyclodeaminase (FTCD) forms a homodimer, with each protomer being comprised of two subdomains

Probab=100.00  E-value=7e-77  Score=530.35  Aligned_cols=175  Identities=37%  Similarity=0.586  Sum_probs=142.8

Q ss_pred             cceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHHHh
Q 020781           20 ILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGA   99 (321)
Q Consensus        20 ~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~el   99 (321)
                      ||+|||||||||||+++||+|++++++++|++|||+|+|+|||||||||+|+   |+       +|.+|+|+++++|+++
T Consensus         1 klveCvpN~SEgR~~~~ie~I~~a~~~~~gv~ll~~~~D~~~NRsv~T~vG~---p~-------~v~~a~~~~~~~A~~~   70 (178)
T PF07837_consen    1 KLVECVPNFSEGRDKEVIEAIAKAARNVPGVKLLDVFSDADYNRSVITLVGE---PE-------AVAEAAFAAIRKALEL   70 (178)
T ss_dssp             -EEEE--EES-SSSHHHHHHHHHHCCTSTTEEEEEEEEETTTTEEEEEEEE----HH-------HHHHHHHHHHHHHHCC
T ss_pred             CeEEEeeeeccCCCHHHHHHHHHHHHcCCCCEEEecCCCCCCCCCeEEEeeC---hH-------HHHHHHHHHHHHHHHh
Confidence            6999999999999999999999999999999999999999999999999996   44       8999999999999999


Q ss_pred             cCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeec--ccCCCCCChHHHhhhcCccCCCC
Q 020781          100 INLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYA--AAHPTGKPLDTIRRELGYYRPNS  177 (321)
Q Consensus       100 IDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg--~A~p~rr~La~iRr~~G~f~~~~  177 (321)
                      |||++|+|+|||||||||||||||+++||+||+++|+++|++||++|+|||||||  +++|+|++|++|||  |      
T Consensus        71 IDm~~H~G~HPRlGavDvipf~Pl~~~t~eec~~~A~~~g~~i~~~l~vPVyLYg~aA~~p~r~~L~~iRr--g------  142 (178)
T PF07837_consen   71 IDMRKHSGEHPRLGAVDVIPFIPLSGVTMEECAELARELGERIGEELGVPVYLYGEAAAHPERRNLADIRR--G------  142 (178)
T ss_dssp             --GGG---SS--SCSEEEEEEEEEES--HHHHHHHHHHHHHHHHHHHT--EEEEETT-SSCCCSSHHHHCT--T------
T ss_pred             cchhcccCCCCCCCccceeeeeeCCCCCHHHHHHHHHHHHHHHHHhhCCCEEEehhhhCCcccCcHHHHHH--H------
Confidence            9999999999999999999999999999999999999999999999999999999  44999999999999  8      


Q ss_pred             CCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCC
Q 020781          178 MGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARP  215 (321)
Q Consensus       178 ~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~  215 (321)
                         ||+|+.++ ++++|+|||||+++||++|+|+||||+
T Consensus       143 ---e~e~l~~~~~~~~w~PD~Gp~~~~~~~Gat~vGAr~  178 (178)
T PF07837_consen  143 ---EYEGLKEKIKDPEWAPDFGPAEFHPTAGATAVGARK  178 (178)
T ss_dssp             ---CCCCHHHHTTSCCC--SBS-S---TTTB-EEEEE-S
T ss_pred             ---HHHhhhhhccCCCCCCCCCCCCCCCCCCeEEEeecC
Confidence               55555544 788999999999999999999999995

The formiminotransferase domain has an N-terminal subdomain that is made up of a six-stranded mixed beta-pleated sheet and five alpha helices, which are arranged on the external surface of the beta sheet. This, in turn, faces the beta-sheet of the C-terminal subdomain to form a double beta-sheet layer. The two subdomains are separated by a short linker sequence, which is not thought to be any more flexible than the remainder of the molecule. The substrate is predicted to form a number of contacts with residues found in both the N-terminal and C-terminal subdomains []. This entry represents the N-terminal subdomain of the formiminotransferase domain.; GO: 0005542 folic acid binding, 0016740 transferase activity, 0008152 metabolic process; PDB: 2PFD_C 1QD1_B.

>PF02971 FTCD: Formiminotransferase domain; InterPro: IPR013802 The formiminotransferase (FT) domain of formiminotransferase-cyclodeaminase (FTCD) forms a homodimer, with each protomer being comprised of two subdomains

Probab=99.97  E-value=6.8e-32  Score=233.99  Aligned_cols=91  Identities=22%  Similarity=0.387  Sum_probs=77.9

Q ss_pred             CeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCCceEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHH
Q 020781          216 WVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAE  288 (321)
Q Consensus       216 ~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~VqAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~  288 (321)
                      |||||||||+++| ++||+||+.||++|      |||++||||||+++ +|++||||||+||++||+|+|||+|+++|++
T Consensus         1 FLIAyNVnLl~T~-~iA~~IA~~iR~sgrg~~~PGgl~~VkAiG~~l~~~~~aQVSmNltd~~~Tpl~~vfe~v~~eA~~   79 (145)
T PF02971_consen    1 FLIAYNVNLLTTK-EIAKKIAKAIRESGRGKDQPGGLKYVKAIGWYLEERGIAQVSMNLTDYEKTPLHRVFEEVKREAAR   79 (145)
T ss_dssp             --EEEEEEESS-H-HHHHHHHHHHCTTTTCTTC--SCTTEEEEEEEETTTTEEEEEEEES-TTTS-HHHHHHHHHHHHHC
T ss_pred             CeEEEEeccCCcH-HHHHHHHHHHHhcCCCCCCCCCcceeeEeEEeeccCCeeEEEEeeecCCCCcHHHHHHHHHHHHHH
Confidence            7999999999988 99999999999999      99999999999976 7999999999999999999999999999999


Q ss_pred             cCCceeeeeccCCChHHHH
Q 020781          289 EGLDVEKGYFTDFSPEMIV  307 (321)
Q Consensus       289 ~Gv~V~~~y~~~f~~~~il  307 (321)
                      |||+|+++++.|+.|.+.|
T Consensus        80 ~Gv~v~gsElVGlvP~~Al   98 (145)
T PF02971_consen   80 YGVPVVGSELVGLVPLDAL   98 (145)
T ss_dssp             TT--EEEEEEES-B-HHHH
T ss_pred             hCCCccceEEEccccHHHH
Confidence            9999999999999998644

The formiminotransferase domain has an N-terminal subdomain that is made up of a six-stranded mixed beta-pleated sheet and five alpha helices, which are arranged on the external surface of the beta sheet. This, in turn, faces the beta-sheet of the C-terminal subdomain to form a double beta-sheet layer. The two subdomains are separated by a short linker sequence, which is not thought to be any more flexible than the remainder of the molecule. The substrate is predicted to form a number of contacts with residues found in both the N-terminal and C-terminal subdomains []. In humans, deficiency of this enzyme results in a disease phenotype []. This entry represents the C-terminal subdomain of the formiminotransferase domain.; GO: 0005542 folic acid binding, 0016740 transferase activity, 0008152 metabolic process; PDB: 1QD1_B 2PFD_C.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	321
1qd1_A	325	The Crystal Structure Of The Formiminotransferase D		7e-15
2pfd_A	541	Anisotropically Refined Structure Of Ftcd Length =		2e-14
1tt9_A	541	Structure Of The Bifunctional And Golgi Associated		2e-14

>pdb|1QD1|A Chain A, The Crystal Structure Of The Formiminotransferase Domain Of Formiminotransferase-Cyclodeaminase. Length = 325

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 113/282 (40%), Gaps = 26/282 (9%)
Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE +N   +DAI RA       V+++       NR  YT V        G
Sbjct: 1   SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRPEDVVEG 60
Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      +  A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct: 61  A----------LNAARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 110
Query: 139 AADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEG 198
              +     VPV+LY  A  T           G Y       + A W         P+ G
Sbjct: 111 GQRLAEELGVPVYLYGEAARTAGRQSLPALRAGEYEALPEKLKQAEWA--------PDFG 162
Query: 199 PIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTL 252
           P    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ +
Sbjct: 163 PSAFVPSWGATVAGARKFLLAFNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQAI 221
Query: 253 GLVHGEDS-TEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 293
           G    E +  +++  LL+    G   V     + A E  L V
Sbjct: 222 GWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPV 263

>pdb|2PFD|A Chain A, Anisotropically Refined Structure Of Ftcd Length = 541

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 99/243 (40%), Gaps = 29/243 (11%)
Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE  N   +DAI +A       V+++       NR  YT V        G
Sbjct: 2   SQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61
Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      ++ A  A   I+   H G HPR G +D   F P+   S DE    AKA 
Sbjct: 62  A----------LSAARTASQLIDXRKHKGEHPRXGALDVCPFIPVRGVSXDECVLCAKAF 111
Query: 139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
              +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct: 112 GQRLAEELNVPVYLYGEAAQXPSRQTLPAIR--AGEYEALPEKLKQAEWV--------PD 161
Query: 197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQ 250
            GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ
Sbjct: 162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220
Query: 251 TLG 253
            +G
Sbjct: 221 GIG 223

>pdb|1TT9|A Chain A, Structure Of The Bifunctional And Golgi Associated Formiminotransferase Cyclodeaminase Octamer Length = 541

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 99/243 (40%), Gaps = 29/243 (11%)
Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE  N   +DAI +A       V+++       NR  YT V        G
Sbjct: 2   SQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQPECVVEG 61
Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                      ++ A  A   I+   H G HPR G +D   F P+   S DE    AKA 
Sbjct: 62  A----------LSAARTASQLIDXRKHKGEHPRXGALDVCPFIPVRGVSXDECVLCAKAF 111
Query: 139 AADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 196
              +     VPV+LY  AA  P+ + L  IR   G Y       + A W         P+
Sbjct: 112 GQRLAEELNVPVYLYGEAAQXPSRQTLPAIR--AGEYEALPEKLKQAEWV--------PD 161
Query: 197 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQ 250
            GP    P+ G  + GAR ++  +NI ++ST   A  RIA  +  +G      G L  VQ
Sbjct: 162 FGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQ 220
Query: 251 TLG 253
            +G
Sbjct: 221 GIG 223

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	321
1qd1_A	325	Formiminotransferase-cyclodeaminase; functional di	3e-70
1tt9_A	541	Formimidoyltransferase-cyclodeaminase (formiminotr	2e-68
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1 Length = 325

 Score =  220 bits (561), Expect = 3e-70
 Identities = 77/297 (25%), Positives = 113/297 (38%), Gaps = 24/297 (8%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE +N   +DAI RA       V+++       NR  YT V         
Sbjct: 1   SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRP------ 54

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                 + +  +  A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct: 55  ----EDVVEGALNAARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 110

Query: 139 AADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEG 198
              +     VPV+LY  A  T           G Y       + A W         P+ G
Sbjct: 111 GQRLAEELGVPVYLYGEAARTAGRQSLPALRAGEYEALPEKLKQAEWA--------PDFG 162

Query: 199 PIQVSPARGIAMIGARPWVALYNIPIMSTDVAATR-----RIARMVSARGGGLPTVQTLG 253
           P    P+ G  + GAR ++  +NI ++ST   A R     R       + G L  VQ +G
Sbjct: 163 PSAFVPSWGATVAGARKFLLAFNINLLSTREQAHRIALDLREQGRGKDQPGRLKKVQAIG 222

Query: 254 LVHGE-DSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEK 309
               E +  +++  LL+    G   V     + A E  L V         P   +  
Sbjct: 223 WYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPVVGSQLVGLVPLKALLD 279

>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A Length = 541

 Score =  221 bits (564), Expect = 2e-68
 Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 24/292 (8%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE  N   +DAI +A       V+++       NR  YT V         
Sbjct: 2   SQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQP------ 55

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                 + +  ++ A  A   I++  H G HPR+G +D   F P+   S+DE    AKA 
Sbjct: 56  ----ECVVEGALSAARTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAF 111

Query: 139 AADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEG 198
              +     VPV+LY  A              G Y       + A W         P+ G
Sbjct: 112 GQRLAEELNVPVYLYGEAAQMPSRQTLPAIRAGEYEALPEKLKQAEW--------VPDFG 163

Query: 199 PIQVSPARGIAMIGARPWVALYNIPIMSTDVAATR-----RIARMVSARGGGLPTVQTLG 253
           P    P+ G  + GAR ++  +NI ++ST   A R     R       + G L  VQ +G
Sbjct: 164 PSSFVPSWGATVTGARKFLIAFNINLLSTKEQAHRIALNLREQGRGKDQPGRLKKVQGIG 223

Query: 254 LVHGE-DSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPE 304
               E +  +++  LL+        V     + A E  L V         P 
Sbjct: 224 WYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPVVGSQLVGLVPL 275

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 70/219 (31%)

Query: 34  LAALDAIERAARLDTETVIVNKFEDRIY-------NRARYTLVSYVVHDSTGTAIYSPLR 86
           +A             +  +  K + +I+       N     L            +   + 
Sbjct: 166 VALD-----VCL-SYK--VQCKMDFKIFWLNLKNCNSPETVLEML-------QKLLYQID 210

Query: 87  QTIIAMADAAYGAINLETHSGA-----------HPR-LGVVDDIVFHPLARASLDEAAWL 134
               + +D +   I L  HS             +   L V+ ++                
Sbjct: 211 PNWTSRSDHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--------------QN 255

Query: 135 AKAVAA-DIGSR-------FQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMG--NQWAG 184
           AKA  A ++  +        QV  FL AA   T   +      +            ++  
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAA---TTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 185 WTMPEILPERPNEGPIQVSPARGIAMIGA--RPWVALYN 221
              P+ LP       +  +P R +++I    R  +A ++
Sbjct: 313 -CRPQDLPREV----LTTNP-RRLSIIAESIRDGLATWD 345

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
1qd1_A	325	Formiminotransferase-cyclodeaminase; functional di	100.0
1tt9_A	541	Formimidoyltransferase-cyclodeaminase (formiminotr	100.0

>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1

Probab=100.00  E-value=6.5e-110  Score=795.90  Aligned_cols=273  Identities=27%  Similarity=0.406  Sum_probs=258.9

Q ss_pred             ccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHHH
Q 020781           19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYG   98 (321)
Q Consensus        19 ~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~e   98 (321)
                      +||+|||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+   |+       +|.+|+++++++|++
T Consensus         1 ~klveCvpNfSEGR~~~vIe~I~~a~~~~~gv~LLd~~~D~~~NRsv~T~vg~---pe-------~v~eaa~~~~~~A~e   70 (325)
T 1qd1_A            1 SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGR---PE-------DVVEGALNAARAAYQ   70 (325)
T ss_dssp             CCEEEECCEESCSSCHHHHHHHHHHHHTSTTCEEEEEEEETTTTEEEEEEEEC---HH-------HHHHHHHHHHHHHHH
T ss_pred             CceEEEeeeecccCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCCceEEEccC---hH-------HHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999995   55       899999999999999


Q ss_pred             hcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCCC
Q 020781           99 AINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRPN  176 (321)
Q Consensus        99 lIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~~  176 (321)
                      +|||++|+|+|||||||||||||||+++|||||+++|+++|++||++|+|||||||+|  +|+|++|++|||  ||||++
T Consensus        71 lIDm~~H~G~HPRmGavDviPf~Pl~~~tmeec~~lA~~~g~~i~~~l~VPVyLYg~Aa~~p~rr~L~~iRr--G~yegl  148 (325)
T 1qd1_A           71 LIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGEAARTAGRQSLPALRA--GEYEAL  148 (325)
T ss_dssp             HCCGGGCCCSSCCSBSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCEEEEETTCSSGGGSCHHHHHT--THHHHH
T ss_pred             hccccccCCCCCCCCccceeeeeeCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeehhhcCCCccCcHHHhcc--cccccc
Confidence            9999999999999999999999999999999999999999999999999999999988  899999999999  966554


Q ss_pred             CCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCCc
Q 020781          177 SMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTV  249 (321)
Q Consensus       177 ~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~V  249 (321)
                      .         ++ ++++|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||++|      |||++|
T Consensus       149 ~---------e~~~~~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNVnL-t~~~~~A~~IA~~vR~~gr~~~~pGGL~~V  218 (325)
T 1qd1_A          149 P---------EKLKQAEWAPDFGPSAFVPSWGATVAGARKFLLAFNINL-LSTREQAHRIALDLREQGRGKDQPGRLKKV  218 (325)
T ss_dssp             H---------HHTTSGGGCCSBSCCCCCTTTBCEEEEECSCCEEEEEEE-SSCHHHHHHHHHHHSTTC------CCSTTE
T ss_pred             h---------hhccCCCCCCCCCCCCCCCCcceEEEecCCceeeEeeec-cCcHHHHHHHHHHhhhcCCCCCCCCCccce
Confidence            3         33 678999999999999999999999999999999999 777999999999999999      999999


Q ss_pred             eEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHHH----HHHHHH
Q 020781          250 QTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV----EKYMNL  313 (321)
Q Consensus       250 qAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il----e~~l~~  313 (321)
                      |||||+|+ +|++||||||+||++||+|+||++|+++|++|||.|+++|++||+|.+.|    |+||++
T Consensus       219 qAmg~~~~e~~~~qVS~Nl~d~~~t~~~~V~e~V~~~A~~~Gv~V~gse~vGl~P~~al~~~a~yyl~~  287 (325)
T 1qd1_A          219 QAIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPVVGSQLVGLVPLKALLDAAAFYCEK  287 (325)
T ss_dssp             EEEEEEETTTTEEEEEEEESCTTTSCHHHHHHHHHHHHHHTTCCEEEEEEESCBCHHHHHHHHHHHHHH
T ss_pred             EEeeEEecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCceeceEEeCcchHHHHHHHHHHHHhc
Confidence            99999997 89999999999999999999999999999999999999999999999763    455543

>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A

Probab=100.00  E-value=9.4e-105  Score=803.94  Aligned_cols=268  Identities=28%  Similarity=0.401  Sum_probs=257.8

Q ss_pred             cccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHH
Q 020781           18 QSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAY   97 (321)
Q Consensus        18 ~~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~   97 (321)
                      |++|+|||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+   |+       +|.+|+|+++++|+
T Consensus         1 m~~lvecvpn~SEgR~~~~i~~I~~a~~~~~gv~lld~~~d~~~NRtv~T~vg~---p~-------~v~~a~~~~~~~A~   70 (541)
T 1tt9_A            1 MSQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQ---PE-------CVVEGALSAARTAS   70 (541)
T ss_pred             CCceEEEeeeecccCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCCCeeEEcCC---cH-------HHHHHHHHHHHHHH
Confidence            679999999999999999999999999999999999999999999999999995   66       99999999999999


Q ss_pred             HhcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCC
Q 020781           98 GAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRP  175 (321)
Q Consensus        98 elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~  175 (321)
                      ++|||++|+|+|||||||||||||||+++||+||+++|+++|++||++|+|||||||+|  +|+|++|++|||  ||||+
T Consensus        71 ~~IDm~~H~G~HPR~GavDvipf~Pl~~~t~eec~~~A~~~~~~i~~~l~vPvylYg~Aa~~p~r~~L~~iRr--G~ye~  148 (541)
T 1tt9_A           71 QLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAFGQRLAEELNVPVYLYGEAAQMPSRQTLPAIRA--GEYEA  148 (541)
T ss_pred             HhcCccccCCCCCCCCCcCccccccCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeeHhhcCCCCcCcHHHhhc--ccccc
Confidence            99999999999999999999999999999999999999999999999999999999988  999999999999  96655


Q ss_pred             CCCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCC
Q 020781          176 NSMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPT  248 (321)
Q Consensus       176 ~~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~  248 (321)
                      +.         ++ ++++|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||+||      |||++
T Consensus       149 ~~---------~~~~~~~~~PD~Gp~~~~~~~G~t~vGAr~~liayNV~L-t~~~~~a~~IA~~vr~~gr~~~~~Ggl~~  218 (541)
T 1tt9_A          149 LP---------EKLKQAEWVPDFGPSSFVPSWGATVTGARKFLIAFNINL-LSTKEQAHRIALNLREQGRGKDQPGRLKK  218 (541)
T ss_pred             ch---------hhccCCCCCCCCCCCCCCCCCceEEEecCcceeeeeeec-cccHHHHHHHHHHhhhcCCCCCCCCCccc
Confidence            54         34 678999999999999999999999999999999999 899999999999999998      99999


Q ss_pred             ceEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHHH
Q 020781          249 VQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV  307 (321)
Q Consensus       249 VqAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il  307 (321)
                      ||||||+|+ +|++||||||+||++||+|+||++|+++|++|||+|++++++||+|.+.|
T Consensus       219 Vqamg~~~~~~~~~qVs~Nl~d~~~t~~~~v~e~v~~~A~~~gv~v~gse~vGl~P~~al  278 (541)
T 1tt9_A          219 VQGIGWYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPVVGSQLVGLVPLKAL  278 (541)
T ss_pred             eeEeeEeecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCccccceEeccchHHHH
Confidence            999999987 89999999999999999999999999999999999999999999999654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	321
d1qd1a1	179	d.58.34.1 (A:2-180) Formiminotransferase domain of	2e-52
d1qd1a2	146	d.58.34.1 (A:181-326) Formiminotransferase domain	4e-12

>d1qd1a1 d.58.34.1 (A:2-180) Formiminotransferase domain of formiminotransferase-cyclodeaminase. {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
family: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
domain: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  168 bits (428), Expect = 2e-52
 Identities = 55/196 (28%), Positives = 77/196 (39%), Gaps = 18/196 (9%)

Query: 19  SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTG 78
           S LV C    SE +N   +DAI RA       V+++       NR  YT V         
Sbjct: 1   SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRP------ 54

Query: 79  TAIYSPLRQTIIAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAV 138
                 + +  +  A AAY  I++  H G HPR+G +D   F P+   ++DE    A+A 
Sbjct: 55  ----EDVVEGALNAARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAF 110

Query: 139 AADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEG 198
              +     VPV+LY  A  T           G Y       + A W         P+ G
Sbjct: 111 GQRLAEELGVPVYLYGEAARTAGRQSLPALRAGEYEALPEKLKQAEW--------APDFG 162

Query: 199 PIQVSPARGIAMIGAR 214
           P    P+ G  + GAR
Sbjct: 163 PSAFVPSWGATVAGAR 178

>d1qd1a2 d.58.34.1 (A:181-326) Formiminotransferase domain of formiminotransferase-cyclodeaminase. {Pig (Sus scrofa) [TaxId: 9823]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
family: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
domain: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 220 YNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLGLVHGE-DSTEIACMLLEPNQ 272
           +NI ++ST   A  RIA  +  +G      G L  VQ +G    E +  +++  LL+   
Sbjct: 5   FNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQAIGWYLDEKNLAQVSTNLLDFEV 63

Query: 273 VGADRVQNRVEKLAAEEGLDV 293
            G   V     + A E  L V
Sbjct: 64  TGLHTVFEETCREAQELSLPV 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d1qd1a1	179	Formiminotransferase domain of formiminotransferas	100.0
d1qd1a2	146	Formiminotransferase domain of formiminotransferas	99.97

>d1qd1a1 d.58.34.1 (A:2-180) Formiminotransferase domain of formiminotransferase-cyclodeaminase. {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
family: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
domain: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3e-76  Score=523.46  Aligned_cols=176  Identities=31%  Similarity=0.471  Sum_probs=166.1

Q ss_pred             ccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHHH
Q 020781           19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYG   98 (321)
Q Consensus        19 ~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~e   98 (321)
                      +||||||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+   |+       +|.+|+++++++|++
T Consensus         1 ~klieCvpNiSEGR~~~~I~~I~~a~~~~~gv~lL~v~~D~d~NRtV~T~vg~---p~-------~v~~aa~~~~~~A~e   70 (179)
T d1qd1a1           1 SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGR---PE-------DVVEGALNAARAAYQ   70 (179)
T ss_dssp             CCEEEECCEESCSSCHHHHHHHHHHHHTSTTCEEEEEEEETTTTEEEEEEEEC---HH-------HHHHHHHHHHHHHHH
T ss_pred             CceEEEeeeeccCCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCCeEEEEecC---hH-------HHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999995   44       899999999999999


Q ss_pred             hcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCCC
Q 020781           99 AINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRPN  176 (321)
Q Consensus        99 lIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~~  176 (321)
                      +|||++|+|+|||||||||||||||+++||+||+++|+++|++||++|+|||||||+|  .|+|++|++|||  |||++ 
T Consensus        71 ~IDm~~H~G~HPR~GavDv~PfiPl~~~t~eec~~lA~~~a~~i~~~l~vPVfLYg~Aa~~~~r~~l~~iR~--G~yeg-  147 (179)
T d1qd1a1          71 LIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGEAARTAGRQSLPALRA--GEYEA-  147 (179)
T ss_dssp             HCCGGGCCCSSCCSBSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCEEEEETTCSSGGGSCHHHHHT--THHHH-
T ss_pred             hcChhhccccCCcCcccceeeeecCCCCCHHHHHHHHHHHHHHHHhhcCCceEEehhhcCCcccccHHHHhc--cceec-
Confidence            9999999999999999999999999999999999999999999999999999999977  688999999999  95544 


Q ss_pred             CCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCC
Q 020781          177 SMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARP  215 (321)
Q Consensus       177 ~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~  215 (321)
                              +.++ +.++|+|||||+++||++|+|+||||.
T Consensus       148 --------l~~~~~~~~~~PD~GP~~~~~~~Gat~vGAR~  179 (179)
T d1qd1a1         148 --------LPEKLKQAEWAPDFGPSAFVPSWGATVAGARK  179 (179)
T ss_dssp             --------HHHHTTSGGGCCSBSCCCCCTTTBCEEEEECS
T ss_pred             --------ccccccCCCCCCCCCCCCcCccCCcEEEeecC
Confidence                    4344 677899999999999999999999994

>d1qd1a2 d.58.34.1 (A:181-326) Formiminotransferase domain of formiminotransferase-cyclodeaminase. {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
family: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
domain: Formiminotransferase domain of formiminotransferase-cyclodeaminase.
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=2e-32  Score=234.59  Aligned_cols=91  Identities=24%  Similarity=0.340  Sum_probs=86.8

Q ss_pred             CeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCCceEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHH
Q 020781          216 WVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAE  288 (321)
Q Consensus       216 ~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~VqAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~  288 (321)
                      |||||||||+|+| ++|++||+.||++|      |||++||||||+++ +|++||||||+|+++||+|+|||+|+++|++
T Consensus         1 fLiAYNVnL~t~~-~~A~~IA~~iRe~Gr~~r~~Ggl~~Vka~G~~l~e~~~aQVSmNl~d~~~t~~h~vfe~v~~~A~~   79 (146)
T d1qd1a2           1 FLLAFNINLLSTR-EQAHRIALDLREQGRGKDQPGRLKKVQAIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQE   79 (146)
T ss_dssp             CCEEEEEEESSCH-HHHHHHHHHHSTTC------CCSTTEEEEEEEETTTTEEEEEEEESCTTTSCHHHHHHHHHHHHHH
T ss_pred             CeEEEEeccCCCH-HHHHHHHHHHHHcCCccCCCCCccceeEeeEEECCCCEEEEEEeecccccCCHHHHHHHHHHHHHH
Confidence            8999999999999 99999999999997      99999999999976 6999999999999999999999999999999


Q ss_pred             cCCceeeeeccCCChHHHH
Q 020781          289 EGLDVEKGYFTDFSPEMIV  307 (321)
Q Consensus       289 ~Gv~V~~~y~~~f~~~~il  307 (321)
                      +||+|++++++|+.|.+.|
T Consensus        80 ~Gv~V~GSElVGLvP~~Al   98 (146)
T d1qd1a2          80 LSLPVVGSQLVGLVPLKAL   98 (146)
T ss_dssp             TTCCEEEEEEESCBCHHHH
T ss_pred             cCCCccccEEEcceeHHHH
Confidence            9999999999999888643