Citrus Sinensis ID: 020906

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHEEccccccEEEEEEEEEccccEEEEEEEc
Coil and Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgSAMTRRGANAAISYMACAVLLVMFNKAalssynfpCANVITLLQMISSCSFLYFLRRWKIINftmgdslmtsdssstfvplktLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAgqkytppvvgsVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIgkssglnsfglmwcngvicgpLLLLWTFLRGdlettinfpyllspGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGsfyhwtrldtiWWASV
Flexible Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgsAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Low Complexity Region (SEG)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMvvsvesvrgvnvPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Disordered region (IsUnstruct)
******************************************RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA**
Disordered Region (DISOPRED)
********************************************ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGK*SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Disordered Region (DISEMBL)
************************ERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Disordered Region (DISPRO)
*************************************SAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWASV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
Q9NTN3	355	UDP-glucuronic acid/UDP-N	yes	no	0.856	0.771	0.3	1e-26
Q5RDC9	355	UDP-N-acetylglucosamine/U	yes	no	0.856	0.771	0.296	3e-26
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.856	0.798	0.296	3e-26
Q18779	329	UDP-sugar transporter sqv	yes	no	0.762	0.741	0.340	4e-26
A2VE55	355	UDP-N-acetylglucosamine/U	yes	no	0.856	0.771	0.293	1e-25
Q95YI5	373	UDP-sugar transporter UST	yes	no	0.859	0.737	0.281	1e-24
Q54YK1	382	Putative UDP-sugar transp	yes	no	0.831	0.696	0.254	4e-24
Q76EJ3	337	UDP-N-acetylglucosamine/U	no	no	0.768	0.729	0.305	1e-21
Q762D5	326	UDP-N-acetylglucosamine/U	yes	no	0.768	0.754	0.297	1e-20
Q941R4	333	GDP-mannose transporter G	no	no	0.843	0.810	0.251	4e-10

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 16/290 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 289

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.
Homo sapiens (taxid: 9606)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 16/290 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 289

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 16/290 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + DE+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 1   KGEAPAKSSTHRHDEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 60

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 61  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 107

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 108 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 167

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   ++ G
Sbjct: 168 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYITG 227

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G
Sbjct: 228 DAQKAMDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 277

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q18779|SQV7_CAEEL UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1

 Score =  119 bits (297), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 17/261 (6%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F      
Sbjct: 15  SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP----- 69

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
            + DSS   +P K +    PL + Y   ++  +   + +N+PM+T LRR ++  TMI+E+
Sbjct: 70  -SLDSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
           ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI TA       +   +
Sbjct: 122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDA 181

Query: 227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAFF 283
             L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F 
Sbjct: 182 KDLGKYGLMFYNCLFMLLPALCVVQY-TGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFV 240

Query: 284 LNYSIFLNTTLNSAVTQTICG 304
           LNYS+ L T  NSA+T T  G
Sbjct: 241 LNYSLVLCTHHNSALTTTCVG 261

Involved in the import of UDP-glucuronic acid (UDP-GlcA), UDP-N-acetylgalactosamine (UDP-GalNAc) and UDP-galactose (UDP-Gal) from the cytoplasm into the Golgi lumen for the biosynthesis of glycoconjugates that play a pivotal role in development.

Caenorhabditis elegans (taxid: 6239)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 16/290 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTHRHEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G
Sbjct: 240 DAQKALDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 289

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 23/298 (7%)

Query: 15  EPARGDEGEKERLLKGD------EKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSS 68
           E   G   ++  LL G        +    SA+  +   +A+ Y   + ++ + NK  L+S
Sbjct: 28  EEKMGGSADRSSLLDGSGSKELSHREREDSALFVKKIGSALFYGLSSFMITVVNKTVLTS 87

Query: 69  YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK--TLMHTLP 126
           Y+FP    ++L Q+ +S   L   +R K++NF                PL+  T     P
Sbjct: 88  YHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFP---------------PLQRNTFAKIFP 132

Query: 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIIL 186
           L + +L  M+  +   + +++PM+  LRR ++  TM++E  + G + +  V  SV  +I 
Sbjct: 133 LPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIG 192

Query: 187 GAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLL 246
           GA +A + DLSF+  GY  V + N  TA     + +   +S +  +GLM+ N +      
Sbjct: 193 GALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPA 252

Query: 247 LLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
           L   ++ G+L+  +NF       F+V    SC++ F L+YS  L T  NSA+T TI G
Sbjct: 253 LALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVG 310

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score =  112 bits (279), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 156/310 (50%), Gaps = 44/310 (14%)

Query: 20  DEGEKERLLKGDEKLFRGSAMT-------------RRGANA----AISYMAC-------A 55
           D+ EK ++   DE +F+                   RG+N+     I++          A
Sbjct: 48  DDNEKMKI-SEDESIFKSINNDNKNQQNDNIINSFNRGSNSFLFNIINFYKSPRFLSGGA 106

Query: 56  VLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTF 115
           VLL +     +++Y+F  +N +   QM+ +   L+ L+ + I+              +T 
Sbjct: 107 VLLYV-----MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKI------------NTN 149

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
              +T+   +PL+  Y++ +++ ++S++ +N+PMY+ L+R      ++MEYF+  +   P
Sbjct: 150 FEKETIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPP 209

Query: 176 PVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLM 235
            ++ SV ++++GA VAG  DLSF+  GY++V L+ I  A YL  + ++   S ++++ ++
Sbjct: 210 KIIASVVVMVIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKVA--SNMSTYDML 267

Query: 236 WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLN 295
           + N V+  P+ +    +  ++E    F +L    F      S  L FFLN+ IF  T++N
Sbjct: 268 YYNSVLSLPITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVN 327

Query: 296 SAVTQTICGS 305
           S +T ++ G 
Sbjct: 328 SPLTTSVTGQ 337

May be nvolved in the import of UDP-sugars.

Dictyostelium discoideum (taxid: 44689)

>sp|Q76EJ3|S35D2_HUMAN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 13/259 (5%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct: 30  SALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 89

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                    +P+K      PL + Y+   +  + S   +++PM+T LR+ T+  T+++E 
Sbjct: 90  ---------IPVKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 136

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G++Y+  ++ SV  IILGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 137 IILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        L+ +   GDL+    F    +  F++    SC L F L Y
Sbjct: 197 KELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMY 256

Query: 287 SIFLNTTLNSAVTQTICGS 305
           S  L +  NSA+T  + G+
Sbjct: 257 STVLCSYYNSALTTAVVGA 275

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Homo sapiens (taxid: 9606)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 13/259 (5%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct: 18  SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDK- 76

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                       K      PL + Y+   +  + S   +++PM+T LR+ T+ FT+++E 
Sbjct: 77  ------------KIPGKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        ++ +   GD +    F +  +  F++    SC+L F L Y
Sbjct: 185 KELGKYGVLFYNACFMLIPTVIISVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLMY 244

Query: 287 SIFLNTTLNSAVTQTICGS 305
           S  L +  NSA+T  + G+
Sbjct: 245 STALCSYYNSALTTAVVGA 263

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 28/298 (9%)

Query: 19  GDEGEKERLLK--GDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANV 76
           G + E  + +K  GD+ + R   +  R   + ++Y   +  +++ NK  LSSYNF     
Sbjct: 8   GVDLEDGKTVKSGGDKPIPR--KIHNRALLSGLAYCISSCSMILVNKFVLSSYNF----- 60

Query: 77  ITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMV 136
                  ++  FL   + +  +   +G SLM   ++   + L+ +    P+ V ++  ++
Sbjct: 61  -------NAGIFLMLYQNFVSVIIVVGLSLMGLITTEP-LTLRLMKVWFPVNVIFVGMLI 112

Query: 137 VSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL 196
            S+ S++ +NV M T L+  T   T + E +L  +++   V  ++ L+I+ A   G  DL
Sbjct: 113 TSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVSGGITDL 172

Query: 197 SFDFFGYAVVFLANITTAIY-------LATIARIGKSSGLNSFGLMWCNGVICGPLLLLW 249
           SF+  GYA        TA Y       + T  ++ +S  LN F ++  N  +  PL LL 
Sbjct: 173 SFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSLPLGLLL 232

Query: 250 TFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI--FLNTTLNSAVTQTICGS 305
           ++   +++     P L  P F +V+  S +L   ++++   FL+ T   A T ++ GS
Sbjct: 233 SYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQT--GATTYSLVGS 288

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
255548892	356	UDP-sugar transporter, putative [Ricinus	0.95	0.853	0.783	1e-138
449437148	353	PREDICTED: UDP-N-acetylglucosamine/UDP-g	0.937	0.849	0.761	1e-131
224089268	354	predicted protein [Populus trichocarpa]	0.953	0.861	0.786	1e-131
225430308	340	PREDICTED: UDP-sugar transporter UST74c	0.915	0.861	0.753	1e-129
363807086	345	uncharacterized protein LOC100819763 [Gl	0.921	0.855	0.739	1e-126
357436995	346	UDP-N-acetylglucosamine/UDP-glucose/GDP-	0.918	0.849	0.744	1e-126
356552517	345	PREDICTED: UDP-glucuronic acid/UDP-N-ace	0.921	0.855	0.732	1e-125
145334197	344	UDP-sugar transporter-like protein [Arab	0.925	0.860	0.726	1e-122
297798730	342	hypothetical protein ARALYDRAFT_491505 [	0.909	0.850	0.718	1e-121
334187081	359	UDP-sugar transporter-like protein [Arab	0.925	0.824	0.695	1e-119

>gi|255548892|ref|XP_002515502.1| UDP-sugar transporter, putative [Ricinus communis] gi|223545446|gb|EEF46951.1| UDP-sugar transporter, putative [Ricinus communis]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/305 (78%), Positives = 277/305 (90%), Gaps = 1/305 (0%)

Query: 1   MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVM 60
           MASNSS + +LP+S  +  D+ EKERL+KGD+K+FRGSAMT+RGA AAISYM+CAVLLV+
Sbjct: 1   MASNSSNNSILPLST-SPSDDKEKERLIKGDDKIFRGSAMTKRGAYAAISYMSCAVLLVI 59

Query: 61  FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT 120
           FNKAALSS+NFP ANVITL QMISS SFLY LRRW+II+FT+G+S+  SD   TFVP +T
Sbjct: 60  FNKAALSSFNFPSANVITLFQMISSVSFLYALRRWRIISFTVGESVPISDGKPTFVPFET 119

Query: 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGS 180
           LMHTLPL+ AYLLYM+V++ESVRGVNVPMYTTLRRTTVAFTM+MEYFLAGQ+YTPP+VGS
Sbjct: 120 LMHTLPLSAAYLLYMLVTMESVRGVNVPMYTTLRRTTVAFTMVMEYFLAGQRYTPPIVGS 179

Query: 181 VGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV 240
           VG+II GAF+AGARDLSFDF+GYAVVFLANITTAIYLATI+RIG SSGLNSFGLMWCNG+
Sbjct: 180 VGVIIFGAFIAGARDLSFDFYGYAVVFLANITTAIYLATISRIGNSSGLNSFGLMWCNGI 239

Query: 241 ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           +CGP+LL WTF RG+LE TINFPYL +PGF+ VL  SC+LAFFLNYSIFLNTTLNSA+TQ
Sbjct: 240 LCGPVLLFWTFFRGELEMTINFPYLFTPGFMAVLLLSCLLAFFLNYSIFLNTTLNSALTQ 299

Query: 301 TICGS 305
           TICG+
Sbjct: 300 TICGN 304

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437148|ref|XP_004136354.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus] gi|449520181|ref|XP_004167112.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/306 (76%), Positives = 271/306 (88%), Gaps = 6/306 (1%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNS K+ MLPVS+P  G E EKERL++GDEKLFRGS+MT+RGA AA+SYMACAVLLV+FN
Sbjct: 6   SNSEKNLMLPVSDPPHGTE-EKERLIRGDEKLFRGSSMTKRGAYAALSYMACAVLLVLFN 64

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANV+TL+QM+ SCSFLY LRRWKII+FT+GDS   SD++++ VP+KTL 
Sbjct: 65  KAALSSYNFPSANVVTLVQMVCSCSFLYALRRWKIISFTVGDSF--SDNATSMVPMKTLR 122

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
            T PLA  YLLYM+ ++ESVRGVNVPMYTTLRRTTV FTM++EY LAGQKYT  VVGSVG
Sbjct: 123 QTSPLAGTYLLYMLATMESVRGVNVPMYTTLRRTTVVFTMVVEYLLAGQKYTYSVVGSVG 182

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+LGAF+AGARDLSFD +GY++VF++NITTAIYLATI+RIGKSSGLNSFGLMWCNGV+C
Sbjct: 183 LIVLGAFIAGARDLSFDVYGYSIVFMSNITTAIYLATISRIGKSSGLNSFGLMWCNGVLC 242

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFL---VVLCFSCILAFFLNYSIFLNTTLNSAVT 299
            P+LL WTF+RGDLE TI+FP+L SPGFL   VV+  SC LAFFLNYSIFLNTTLNSAVT
Sbjct: 243 APVLLFWTFIRGDLEATISFPHLFSPGFLVSRVVMFCSCTLAFFLNYSIFLNTTLNSAVT 302

Query: 300 QTICGS 305
           QTICG+
Sbjct: 303 QTICGN 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089268|ref|XP_002308668.1| predicted protein [Populus trichocarpa] gi|222854644|gb|EEE92191.1| predicted protein [Populus trichocarpa]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/309 (78%), Positives = 272/309 (88%), Gaps = 4/309 (1%)

Query: 1   MASNSSKSPMLPVSEPARGDEG--EKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLL 58
           MAS+SS + +LPVS     DE   EKERL+KGDEK FRGS+MT+RGA AAISYM+CAVLL
Sbjct: 1   MASSSSSNSILPVSVSPLDDERQREKERLIKGDEKAFRGSSMTKRGAYAAISYMSCAVLL 60

Query: 59  VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL 118
           V+FNKAALSSYNFP ANVITL QMI SCSFLY LRRW+II+FT G SL TSD ++TFVPL
Sbjct: 61  VLFNKAALSSYNFPSANVITLFQMICSCSFLYALRRWRIISFTDGGSLTTSDVNATFVPL 120

Query: 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV 178
           +TLMHTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTMIMEY LAGQ+YT P+ 
Sbjct: 121 ETLMHTLPLALTYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMIMEYILAGQRYTRPIF 180

Query: 179 GSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIG-KSSGLNSFGLMWC 237
           GSVGLI+LGAF+AGARDLSFDF+GYAVVF AN TTAIYLATI+RIG KSSGLNSFGLMWC
Sbjct: 181 GSVGLIVLGAFIAGARDLSFDFYGYAVVFAANFTTAIYLATISRIGRKSSGLNSFGLMWC 240

Query: 238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL-VVLCFSCILAFFLNYSIFLNTTLNS 296
           NG+ICGP+LL WTF+RGDL  T+NFPYL S GFL  VL  SCILAFFLNYSIFLNTTLNS
Sbjct: 241 NGIICGPVLLFWTFIRGDLGMTMNFPYLFSLGFLQAVLLLSCILAFFLNYSIFLNTTLNS 300

Query: 297 AVTQTICGS 305
           A+TQTICG+
Sbjct: 301 ALTQTICGN 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430308|ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vitis vinifera]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/304 (75%), Positives = 265/304 (87%), Gaps = 11/304 (3%)

Query: 2   ASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMF 61
           +SNSSKSPMLP+S+P R D+           K+F+GSAM++RGA AAISYM+CAVLLV+F
Sbjct: 3   SSNSSKSPMLPISDPPRPDD-----------KVFKGSAMSKRGAYAAISYMSCAVLLVIF 51

Query: 62  NKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121
           NKAALSSY+FPCA+VITL Q+I SCSFLY LRRWKII+FT+G+S   +D S  FVP+ TL
Sbjct: 52  NKAALSSYHFPCASVITLFQIICSCSFLYALRRWKIISFTLGESSNVNDGSPVFVPITTL 111

Query: 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSV 181
           +HTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTM +EY LAGQ+YT  VVGSV
Sbjct: 112 IHTLPLAITYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMFVEYILAGQRYTSSVVGSV 171

Query: 182 GLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVI 241
           GLI+LGAF+AGARDLSFD +GYAVVFL+NITTAIYLATIARIGKSSGLNSFGLMWCNG++
Sbjct: 172 GLIVLGAFIAGARDLSFDSYGYAVVFLSNITTAIYLATIARIGKSSGLNSFGLMWCNGIL 231

Query: 242 CGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQT 301
           CGP+LLLWTF+RGDL   +NFP+   PGFLVVL  SCILAFFLNYSIFLNTTLNSAVTQT
Sbjct: 232 CGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVLLLSCILAFFLNYSIFLNTTLNSAVTQT 291

Query: 302 ICGS 305
           ICG+
Sbjct: 292 ICGN 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807086|ref|NP_001242077.1| uncharacterized protein LOC100819763 [Glycine max] gi|255641342|gb|ACU20948.1| unknown [Glycine max]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/303 (73%), Positives = 264/303 (87%), Gaps = 8/303 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D+KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKSHDA--------DDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ S  FLY LRRW++I+F+ G+SL  SD+S+ FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSRCFLYLLRRWRMISFSTGESLHISDNSTKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDAYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFPYL SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPYLFSPGFIVILLFSCVLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGS 305
           CG+
Sbjct: 298 CGN 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357436995|ref|XP_003588773.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula] gi|355477821|gb|AES59024.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/305 (74%), Positives = 265/305 (86%), Gaps = 11/305 (3%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS+ PMLP+S+P +            D+KLF+GSAMT+RGA AAISYM+CAVLLVMFN
Sbjct: 6   SNSSEKPMLPLSDPPKNQI---------DDKLFKGSAMTKRGAYAAISYMSCAVLLVMFN 56

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+SSC FLY LRRW+II+FT  +SL+ SD+S+ FV LKTL 
Sbjct: 57  KAALSSYNFPSANVITLLQMVSSCFFLYILRRWRIISFTASESLLISDNSTKFVSLKTLK 116

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HT PLA AYLLYM+V++E+VRGVNVPMYTTLRRTTV FTM++E+ L GQ+YT  VV SVG
Sbjct: 117 HTFPLAGAYLLYMLVTMEAVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTHSVVFSVG 176

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GY+VVFLAN+TTAIYLATIARIGK+SGLNSFGLMWCNG++C
Sbjct: 177 LIVFGAFVAGARDLSFDTYGYSVVFLANVTTAIYLATIARIGKTSGLNSFGLMWCNGILC 236

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLV--VLCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           GP+LL+WTF+RGDL+TTI+FPYL SPGFLV   + F CILAFFLNYSIFLNTTLNSA+TQ
Sbjct: 237 GPVLLIWTFIRGDLKTTIDFPYLFSPGFLVCYFVFFLCILAFFLNYSIFLNTTLNSALTQ 296

Query: 301 TICGS 305
           TICG+
Sbjct: 297 TICGN 301

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552517|ref|XP_003544613.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 222/303 (73%), Positives = 262/303 (86%), Gaps = 8/303 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKTQDA--------DNKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ SC FLY LR W++I+F+ G+ L  S++SS FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSCCFLYLLRCWRMISFSTGEPLHISENSSKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDGYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFP+L SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPHLFSPGFIVILLFSCMLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGS 305
           CG+
Sbjct: 298 CGN 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334197|ref|NP_001078479.1| UDP-sugar transporter-like protein [Arabidopsis thaliana] gi|332660630|gb|AEE86030.1| UDP-sugar transporter-like protein [Arabidopsis thaliana]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/300 (72%), Positives = 260/300 (86%), Gaps = 4/300 (1%)

Query: 7   KSPMLPVSEPARGDEGEKERLLKG-DEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAA 65
            +P+LPVS+P    E + +   KG D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAA
Sbjct: 3   NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAA 60

Query: 66  LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
           LSSY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + DS+STFVP+KTL HTL
Sbjct: 61  LSSYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDSASTFVPVKTLFHTL 119

Query: 126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLII 185
           PLA+AYLLYM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+
Sbjct: 120 PLAIAYLLYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGIIL 179

Query: 186 LGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPL 245
           LGAF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+
Sbjct: 180 LGAFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPI 239

Query: 246 LLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGS 305
           L++WTF+ GDLE TINFP+LL+PGF+VVL  SC+LAF LNY IFLNTTLNSA+TQTICG+
Sbjct: 240 LMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTLNSALTQTICGN 299

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798730|ref|XP_002867249.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata] gi|297313085|gb|EFH43508.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/298 (71%), Positives = 257/298 (86%), Gaps = 7/298 (2%)

Query: 8   SPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALS 67
           +P+LPVS+P    E +       D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAALS
Sbjct: 7   NPVLPVSDPPLAGENDV------DDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALS 60

Query: 68  SYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127
           SY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + D++S FVP+KTL HTLPL
Sbjct: 61  SYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDNASNFVPVKTLFHTLPL 119

Query: 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILG 187
           ++AYL+YM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+LG
Sbjct: 120 SIAYLMYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGVILLG 179

Query: 188 AFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLL 247
           AF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+L+
Sbjct: 180 AFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPILM 239

Query: 248 LWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGS 305
           +WTF+ GDLE TINFP+LLSPGF+VVL  SC+LAFFLNY IFLNTTLNSA+TQTICG+
Sbjct: 240 IWTFICGDLEKTINFPHLLSPGFMVVLLCSCVLAFFLNYCIFLNTTLNSALTQTICGN 297

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187081|ref|NP_001190887.1| UDP-sugar transporter-like protein [Arabidopsis thaliana] gi|332660631|gb|AEE86031.1| UDP-sugar transporter-like protein [Arabidopsis thaliana]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/315 (69%), Positives = 260/315 (82%), Gaps = 19/315 (6%)

Query: 7   KSPMLPVSEPARGDEGEKERLLKG-DEKLFRGSAMTRRGANAAISYMACAVL-------- 57
            +P+LPVS+P    E + +   KG D++LF+GSAMT+RGA AA+SYMACAVL        
Sbjct: 3   NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAVLVFSRIRFS 60

Query: 58  -------LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSD 110
                  LV+FNKAALSSY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + D
Sbjct: 61  GFRSSFMLVLFNKAALSSYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SID 119

Query: 111 SSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAG 170
           S+STFVP+KTL HTLPLA+AYLLYM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L G
Sbjct: 120 SASTFVPVKTLFHTLPLAIAYLLYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTG 179

Query: 171 QKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLN 230
           Q+YT  ++GSVG+I+LGAF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLN
Sbjct: 180 QRYTRSIIGSVGIILLGAFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLN 239

Query: 231 SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFL 290
           SFGLMW NG+ICGP+L++WTF+ GDLE TINFP+LL+PGF+VVL  SC+LAF LNY IFL
Sbjct: 240 SFGLMWSNGIICGPILMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFL 299

Query: 291 NTTLNSAVTQTICGS 305
           NTTLNSA+TQTICG+
Sbjct: 300 NTTLNSALTQTICGN 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
WB|WBGene00005025	329	sqv-7 [Caenorhabditis elegans	0.759	0.738	0.347	9.1e-29
UNIPROTKB|F1PQY1	349	SLC35D2 "Uncharacterized prote	0.765	0.702	0.318	2.2e-27
ZFIN|ZDB-GENE-040826-5	336	slc35d1a "solute carrier famil	0.765	0.729	0.323	3.2e-26
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.768	0.783	0.329	4e-26
ZFIN|ZDB-GENE-080125-1	299	slc35d2 "solute carrier family	0.762	0.816	0.306	4e-26
UNIPROTKB|E1BM02	338	SLC35D2 "UDP-N-acetylglucosami	0.765	0.724	0.315	8.4e-26
MGI|MGI:1917734	326	Slc35d2 "solute carrier family	0.765	0.751	0.3	8.4e-26
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.762	0.672	0.316	8.4e-26
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.7	0.586	0.283	1.1e-25
UNIPROTKB|Q9NTN3	355	SLC35D1 "UDP-glucuronic acid/U	0.853	0.769	0.295	1.1e-25

WB|WBGene00005025 sqv-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 91/262 (34%), Positives = 140/262 (53%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F    SL
Sbjct:    15 SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP---SL 71

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                DSS   +P K +    PL + Y   +            PM+T LRR ++  TMI+E+
Sbjct:    72 ---DSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANI-TTAIYLATIARIGK 225
             ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI T A+ + T  ++  
Sbjct:   122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLD- 180

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAF 282
             +  L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F
Sbjct:   181 AKDLGKYGLMFYNCLFMLLPALCVVQYT-GDLDRAYSFMLSDSMTSSVWTCFLLSCICGF 239

Query:   283 FLNYSIFLNTTLNSAVTQTICG 304
              LNYS+ L T  NSA+T T  G
Sbjct:   240 VLNYSLVLCTHHNSALTTTCVG 261

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1PQY1 SLC35D2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/261 (31%), Positives = 134/261 (51%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y AC+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct:    40 SALFYGACSFLIVLVNKALLTAYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 99

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P+K L    PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:   100 ---------IPVKKLF---PLPLLYIGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 147

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIY-LATIARIGK 225
              + G++Y+  ++ SV  IILGAF+A   DL+F   GY  VFL +I TA   + T  ++G 
Sbjct:   148 IILGKQYSLNIIASVFTIILGAFIAAGSDLAFYLEGYIFVFLNDIFTAANGVYTKQKMGP 207

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
                L  +G+++ N   +  P L++ +   GDL     F    +  F++    SC L F L
Sbjct:   208 KE-LGKYGVLFYNACFMIIPTLII-SVSTGDLRQATEFNEWKNVLFIIQFLLSCFLGFLL 265

Query:   285 NYSIFLNTTLNSAVTQTICGS 305
              YS+ L +  NSA+T  + G+
Sbjct:   266 MYSMVLCSYYNSALTTAVVGA 286

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040826-5 slc35d1a "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1a" [Danio rerio (taxid:7955)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 84/260 (32%), Positives = 133/260 (51%)

Query:    46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDS 105
             +AA  Y   + L+V+ NK+ L++Y FP +  + + QM+++   L   +  ++I F     
Sbjct:    25 SAAGFYGISSFLIVVVNKSVLTNYRFPSSICVGIGQMLATVVVLRVGKALRVITFP---- 80

Query:   106 LMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIME 165
                 D S   +P KT     PL + Y+               PM+T LRR ++ FTM+ E
Sbjct:    81 --EFDGS---IPRKTF----PLPLLYVGNQITGLFGTKRLNLPMFTVLRRFSILFTMLAE 131

Query:   166 YFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGK 225
              FL  +K++ PV  +V  +ILGAFVA + DL+FD  GY  + + ++ TA   A + +   
Sbjct:   132 GFLLKKKFSRPVQLTVFTMILGAFVAASADLAFDLQGYVFILMNDVLTAANGAFVKQKLD 191

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
             S  L  +GL++ N + +  P LLL   + GD++   ++       F+     SCI+ F L
Sbjct:   192 SKELGKYGLLYYNALFMILPTLLL-AHVTGDMDKAFDYDGWSDVLFISQFFLSCIMGFIL 250

Query:   285 NYSIFLNTTLNSAVTQTICG 304
              YS  L T  NSA+T TI G
Sbjct:   251 MYSTVLCTQYNSALTTTIVG 270

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 87/264 (32%), Positives = 133/264 (50%)

Query:    43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTM 102
             +G   A++Y   +V +  FNKA L+ Y F  +N +TL QMI S  FL  ++ +  I++  
Sbjct:    12 KGFFVAVAYGVTSVSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYP- 70

Query:   103 GDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTM 162
                    D +     L        L++ ++L +            P+++ LRR +    +
Sbjct:    71 -------DFN-----LDLCKKLASLSLLFILMVISGLAALAKTNVPLFSALRRLSTLIVI 118

Query:   163 IMEYFLAGQKYTPP-VVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIA 221
             + E FL G K TP   V SV +++LGA +AG  D +FDF G   +      TA YL  IA
Sbjct:   119 VGEGFLLG-KVTPTDEVQSVVVMVLGALIAGLGDATFDFVGSIYILFNCFVTAGYLIYIA 177

Query:   222 RIGKSSGLNSFGLM-WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280
             +  K + LN+FGLM +CN ++  P  ++ TF+  + E    F    + GF      S I 
Sbjct:   178 KKTKETQLNTFGLMFYCN-ILSLPATIILTFIT-EWEGISTFEGYGNIGFQFCFFMSSIQ 235

Query:   281 AFFLNYSIFLNTTLNSAVTQTICG 304
             AF LNY IFL +T+NS +T +I G
Sbjct:   236 AFLLNYFIFLCSTMNSPLTTSITG 259

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-080125-1 slc35d2 "solute carrier family 35, member D2" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 80/261 (30%), Positives = 131/261 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A  Y  C+ L+++ NK+ L+ Y FP    + + QM ++   LY  +  K I+F      
Sbjct:     9 SATFYAFCSFLIIVINKSILTEYKFPSFMFLGIGQMAATIIILYAAKMNKTIHF------ 62

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                D   + V         PL + Y+               PM+T LR+ T+  TMIME 
Sbjct:    63 --QDFDRSIVG-----KIFPLPLLYVGNHVTGLGGTKKLSLPMFTVLRKFTILLTMIMES 115

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIY-LATIARIGK 225
              +  + + PP+V SV  I+LGA +A + DLSF+  GY  V + ++ TA   + T  ++G 
Sbjct:   116 RILKKSFAPPLVCSVLAIVLGALIAASSDLSFNAEGYTFVLMNDVFTAASGVYTKKKLGM 175

Query:   226 SSGLNSFGLMWCNG-VICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
               GL  +G+++ N  +I  P +L   +  GDL+  + +   LS  F+     SC++ F L
Sbjct:   176 E-GLGKYGVLFYNAFIIIIPTVLASAYT-GDLQKALTYEGWLSFTFIFYFLLSCVMGFIL 233

Query:   285 NYSIFLNTTLNSAVTQTICGS 305
              YSI L +  N+A+T T+ G+
Sbjct:   234 MYSIILCSYYNTALTTTVVGA 254

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BM02 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Bos taurus (taxid:9913)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 82/260 (31%), Positives = 127/260 (48%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ LLV+ NKA L++Y FP   V+ + QM  +   LY  +  KII+F   D  
Sbjct:    30 SALFYGTCSFLLVLINKALLTTYRFPSPIVLGVGQMAVTIMILYVSKLNKIIHFPDFDKK 89

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:    90 ---------IPTKLF----PLPLLYVGNHISGLASTSKLSLPMFTVLRKFTIPLTLLLET 136

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G++Y+  ++ SV  IILGAFVA   DL+F+  GY  VFL +I TA       +    
Sbjct:   137 IILGKQYSLNIIVSVFAIILGAFVAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P L++ +   GDL     F    +  F++    SC L F L 
Sbjct:   197 KELGKYGVLFYNACFMIIPTLII-SVSTGDLRQATEFNQWKNVLFIIQFLLSCFLGFLLM 255

Query:   286 YSIFLNTTLNSAVTQTICGS 305
             YS  L +  NSA+T  + G+
Sbjct:   256 YSTVLCSYYNSALTTAVVGA 275

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1917734 Slc35d2 "solute carrier family 35, member D2" [Mus musculus (taxid:10090)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 78/260 (30%), Positives = 130/260 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct:    18 SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDKK 77

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+ FT+++E 
Sbjct:    78 ---------IPGKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct:   125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P +++ +   GD +    F +  +  F++    SC+L F L 
Sbjct:   185 KELGKYGVLFYNACFMLIPTVII-SVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLM 243

Query:   286 YSIFLNTTLNSAVTQTICGS 305
             YS  L +  NSA+T  + G+
Sbjct:   244 YSTALCSYYNSALTTAVVGA 263

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 82/259 (31%), Positives = 131/259 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             AA  Y   + L+V+ NK+ L++Y FP +  + + QM ++   +  LR  K +N      +
Sbjct:    37 AAAFYGISSFLIVVVNKSVLTNYRFPSSLALGIGQMFAT---VVVLRGAKALN------M 87

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
             ++       V  K      PL + Y+               PM+T LRR ++ FTM+ E 
Sbjct:    88 ISFPDFDWHVAYKVF----PLPLLYVGNQLTGLFGTKQLNLPMFTVLRRFSILFTMLFEG 143

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
             +L  QK++  +  +V  +ILGAFVA + DL+FD  GY  + L NI TA   A + +   S
Sbjct:   144 YLLKQKFSWSIKATVFTMILGAFVAASSDLAFDLQGYVFITLNNILTAANGAYMKQKLDS 203

Query:   227 SGLNSFGLMWCNGVICG-PLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +GL++ N ++   P ++L  +  GD++ T+         F++    SC++ F L 
Sbjct:   204 KELGKYGLLYYNALLMIIPTVVL-AYFTGDVQKTLECEVWADYFFVIQFVLSCVMGFILM 262

Query:   286 YSIFLNTTLNSAVTQTICG 304
             YSI L T  NSA+T TI G
Sbjct:   263 YSIMLCTHYNSALTTTIVG 281

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 68/240 (28%), Positives = 127/240 (52%)

Query:    66 LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
             +++Y+F  +N +   QM+ +   L+ L+ + I+         T+    T   +K LM   
Sbjct:   112 MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKIN------TNFEKET---IKKLM--- 159

Query:   126 PLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPP-VVGSVGLI 184
             PL+  Y++ +            PMY+ L+R      ++MEYF+  +K +PP ++ SV ++
Sbjct:   160 PLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFIL-KKVSPPKIIASVVVM 218

Query:   185 ILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGP 244
             ++GA VAG  DLSF+  GY++V L+ I  A YL  + ++  +S ++++ +++ N V+  P
Sbjct:   219 VIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKV--ASNMSTYDMLYYNSVLSLP 276

Query:   245 LLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
             + +    +  ++E    F +L    F      S  L FFLN+ IF  T++NS +T ++ G
Sbjct:   277 ITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTG 336

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q9NTN3 SLC35D1 "UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter" [Homo sapiens (taxid:9606)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 86/291 (29%), Positives = 142/291 (48%)

Query:    18 RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
             +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct:    13 KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query:    75 NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
               + L QM+++ + L+  +  +++ F         D +   VP KT     PL + Y   
Sbjct:    73 LCVGLGQMVATVAVLWVGKALRVVKFP------DLDRN---VPRKTF----PLPLLYFGN 119

Query:   135 MXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
                          PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct:   120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query:   195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV-ICGPLLLLWTFLR 253
             DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N + +  P L +  +  
Sbjct:   180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAI-AYFT 238

Query:   254 GDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
             GD +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G
Sbjct:   239 GDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 289

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=NAS

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006065 "UDP-glucuronate biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0015787 "UDP-glucuronic acid transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032667001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (340 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	1e-08
pfam08449	303	pfam08449, UAA, UAA transporter family	2e-05

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 54/266 (20%), Positives = 115/266 (43%), Gaps = 24/266 (9%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           A++SY   ++L+ + NK  LS+  F    ++  +Q +     L  L+  +++ F +  + 
Sbjct: 10  ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKA- 68

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                              P++   ++ +  S +S++ + VP+YT  +  T+      E 
Sbjct: 69  ---------------KKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEV 113

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF-------GYAVVFLANITTAIYLAT 219
              G + T   + S  L++L + VA   D     F       GY  +F   +++A ++  
Sbjct: 114 LFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLI 173

Query: 220 IARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279
           + +  K +    F  M+ N ++  P+LL ++FL  D  +  N    LS   L+ +  S +
Sbjct: 174 MRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGL 232

Query: 280 LAFFLNYSIFLNTTLNSAVTQTICGS 305
            +  ++Y       + S+ T ++ G+
Sbjct: 233 CSVGISYCSAWCVRVTSSTTYSMVGA 258

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 14/198 (7%)

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
           +PLKT +    +   + L  V++ E+++ ++ P +   +   +   MI+   + G++Y+ 
Sbjct: 62  IPLKTYVL---IVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSS 118

Query: 176 PVVGSVGLIILGAFVA---------GARDLSF-DFFGYAVVFLANITTAIYLATIARIGK 225
               S  LI LG  +           ++  +F D  G A++F A +  A+   T  ++ K
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 226 SSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS-PGFLVVLCFSCILAFFL 284
             G +S  +M+ + ++  P  LL               + L  P  L  L  + +  +  
Sbjct: 179 KYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVG 238

Query: 285 NYSIFLNTTLNSAVTQTI 302
            + +F   +   A+T T+
Sbjct: 239 QFFVFYLISEFGALTVTL 256

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.96
KOG1581	327	consensus UDP-galactose transporter related protei	99.9
KOG1580	337	consensus UDP-galactose transporter related protei	99.88
KOG1582	367	consensus UDP-galactose transporter related protei	99.83
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.77
PRK11272	292	putative DMT superfamily transporter inner membran	99.74
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.71
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.7
PLN00411	358	nodulin MtN21 family protein; Provisional	99.69
PRK11689	295	aromatic amino acid exporter; Provisional	99.68
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.66
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.63
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.63
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.62
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.62
PRK15430	296	putative chloramphenical resistance permease RarD;	99.62
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.52
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.42
KOG2765	416	consensus Predicted membrane protein [Function unk	99.4
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.37
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.34
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.15
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.88
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.77
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.72
COG2962	293	RarD Predicted permeases [General function predict	98.67
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.65
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.58
COG2510	140	Predicted membrane protein [Function unknown]	98.25
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.2
KOG2766	336	consensus Predicted membrane protein [Function unk	98.12
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
PLN00411	358	nodulin MtN21 family protein; Provisional	97.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.74
PRK11272	292	putative DMT superfamily transporter inner membran	97.68
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.53
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.46
PRK11689	295	aromatic amino acid exporter; Provisional	97.43
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.43
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.23
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.2
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.16
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.14
COG2510	140	Predicted membrane protein [Function unknown]	97.04
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.01
PRK15430	296	putative chloramphenical resistance permease RarD;	96.99
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.97
PRK11431	105	multidrug efflux system protein; Provisional	96.93
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.9
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	96.89
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	96.88
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.79
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.72
COG2076	106	EmrE Membrane transporters of cations and cationic	96.68
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.59
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.29
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.95
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.14
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	93.77
PRK13499	345	rhamnose-proton symporter; Provisional	93.39
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.42
COG2962	293	RarD Predicted permeases [General function predict	91.72
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	91.42
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	89.3
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.15
KOG2765	416	consensus Predicted membrane protein [Function unk	86.08
KOG4510	346	consensus Permease of the drug/metabolite transpor	85.02
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	80.76

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.4e-38  Score=282.14  Aligned_cols=266  Identities=30%  Similarity=0.486  Sum_probs=246.8

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccH
Q 020906           39 AMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL  118 (320)
Q Consensus        39 ~~~~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (320)
                      +.+.+.+.+++.|+.+|+.+++.||++++.|+||...++...|.+.+.+.++++++.|.+++|+             +++
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~-------------l~~   74 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRP-------------LDL   74 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCC-------------cCh
Confidence            3455668899999999999999999999999998888888899999999999999999988763             567


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCccc
Q 020906          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSF  198 (320)
Q Consensus       119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~  198 (320)
                      +..|+|+|++++|.++++++..+++|+|+|+++++|+.+|+++++.|..++|++++...+.++..+.+|...+...|.++
T Consensus        75 ~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf  154 (314)
T KOG1444|consen   75 RTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF  154 (314)
T ss_pred             HHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh-hcCCCCcchHHHHHHHHH
Q 020906          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFS  277 (320)
Q Consensus       199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~-~~~~~~~~~~~~~~l~~s  277 (320)
                      +..||.|++.+.++.+.+.++.|+..+..+.+.+++++|+++++.|.+....+.+||++.. .+++.+.++.++..+.++
T Consensus       155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS  234 (314)
T KOG1444|consen  155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS  234 (314)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999998732 345557778889999999


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          278 CILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       278 ~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      |++|+..+|++++|.+.+|++|.+++| +|+...+.++++.
T Consensus       235 cv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll  274 (314)
T KOG1444|consen  235 CVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLL  274 (314)
T ss_pred             HHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHh
Confidence            999999999999999999999999999 8888888777654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=4.9e-38  Score=284.48  Aligned_cols=262  Identities=25%  Similarity=0.355  Sum_probs=228.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHH
Q 020906           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (320)
Q Consensus        42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (320)
                      .+....+..|++++++.++.||++++.++||+|++++.+|+.++.+.....+.+|..+.+..            .++..+
T Consensus        16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~------------~~~~~~   83 (316)
T KOG1441|consen   16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKI------------SSKLPL   83 (316)
T ss_pred             HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcc------------ccccch
Confidence            44567789999999999999999999899999999999999999999988888876543211            122457


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchH
Q 020906          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF  201 (320)
Q Consensus       122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~  201 (320)
                      +.++|+|++++++++++|.|++++||+++|++|++.|++++++++++.+|++++..++++++++.|+.+++++|.++|+.
T Consensus        84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~  163 (316)
T KOG1441|consen   84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLF  163 (316)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh--cCCCCChhhHHHHHHHHHHHHHH-HHHHH-hCChhhhhcCCCCcchHHHHHHHHH
Q 020906          202 GYAVVFLANITTAIYLATIARIG--KSSGLNSFGLMWCNGVICGPLLL-LWTFL-RGDLETTINFPYLLSPGFLVVLCFS  277 (320)
Q Consensus       202 G~~~~l~s~~~~a~~~v~~~~~~--~~~~~~~~~l~~~~~~~~~~~l~-~~~~~-~ge~~~~~~~~~~~~~~~~~~l~~s  277 (320)
                      |+..++++.+..++++++.|+++  +++++|+.++++|+++++...++ |+... +|+.. .......++..++..++.+
T Consensus       164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s  242 (316)
T KOG1441|consen  164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS  242 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH
Confidence            99999999999999999999999  46789999999999999999999 87653 33322 1001112333344444544


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          278 CILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       278 ~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                       ++++++|.+.|++++++||+|++|.|++|+++.++.||+
T Consensus       243 -v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~  281 (316)
T KOG1441|consen  243 -VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWL  281 (316)
T ss_pred             -HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEee
Confidence             999999999999999999999999999999999999975

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.4e-33  Score=263.77  Aligned_cols=266  Identities=16%  Similarity=0.138  Sum_probs=219.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHH
Q 020906           40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK  119 (320)
Q Consensus        40 ~~~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (320)
                      ...+..+.++.|+++|+..++.||+++++  +|+|++++++|++++++.+.++...+..+.|+.+           ..++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~  112 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-----------SLKL  112 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-----------CHHH
Confidence            34577888999999999999999999985  7889999999999998877666554422211100           0235


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccc
Q 020906          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD  199 (320)
Q Consensus       120 ~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~  199 (320)
                      ++++++|+|+++.......+.|++++++++++++|++.|+++++++++++|||++++++++++++++|+++++.+|.+++
T Consensus       113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~  192 (350)
T PTZ00343        113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT  192 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhH
Confidence            77899999999987777889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCChhhHHHHHHHHHHHHHHHHHHHhCC--hhhhh-c----CCCCcc
Q 020906          200 FFGYAVVFLANITTAIYLATIARIGKSS-----GLNSFGLMWCNGVICGPLLLLWTFLRGD--LETTI-N----FPYLLS  267 (320)
Q Consensus       200 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~-----~~~~~~l~~~~~~~~~~~l~~~~~~~ge--~~~~~-~----~~~~~~  267 (320)
                      +.|+++++++++++|+|+++.||.++++     +.++.++..+..+++.++++|+....+.  +...+ +    ...+..
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            9999999999999999999999998754     3677777778889999999888764322  11111 1    111111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       268 ~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ...+..++.+++..++.|.++|.+++++||+|+++.+++|+++.+++|++.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~  323 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII  323 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH
Confidence            234456778899999999999999999999999999999999999999853

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6e-36  Score=257.87  Aligned_cols=265  Identities=23%  Similarity=0.290  Sum_probs=238.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHc-----ccccccCCCCCCCCCCCCC
Q 020906           42 RRGANAAISYMACAVLLVMFNKAALSS--YNFPCANVITLLQMISSCSFLYFLRRW-----KIINFTMGDSLMTSDSSST  114 (320)
Q Consensus        42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~--~~f~~p~~L~~~q~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  114 (320)
                      ++...++..|..+|+++++.||++++.  ...+.|.++++.|++.+..++..+.+.     +.+++|..           
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~-----------   95 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSL-----------   95 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcc-----------
Confidence            344566788999999999999999985  457899999999999998888776653     22333321           


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906          115 FVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (320)
Q Consensus       115 ~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~  194 (320)
                      ++|.+..++++|+++.+.+++.++|.||+|++|++|++-|+++.+|++++.++++|+|.+.....++.+++.|..+..-+
T Consensus        96 ~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdq  175 (347)
T KOG1442|consen   96 QLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQ  175 (347)
T ss_pred             cccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccc
Confidence            16678899999999999999999999999999999999999999999999999999999999999999999999887766


Q ss_pred             C---cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHH
Q 020906          195 D---LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL  271 (320)
Q Consensus       195 d---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~  271 (320)
                      |   ...++.|.++++.++++.|+..+++||.....+-.-+.+.+|||..+....+|...+.||.+..+.+|+..+..||
T Consensus       176 E~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw  255 (347)
T KOG1442|consen  176 EGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFW  255 (347)
T ss_pred             ccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHH
Confidence            6   5678999999999999999999999999887777789999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       272 ~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      ..+.++|++||.+|+.+.+-||.|||+|++|.|+.|.+.+.++.+.
T Consensus       256 ~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~  301 (347)
T KOG1442|consen  256 ILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVA  301 (347)
T ss_pred             HHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988754

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=6.6e-31  Score=241.45  Aligned_cols=260  Identities=17%  Similarity=0.154  Sum_probs=212.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (320)
                      ..+-+..|+++|++.+++||+++++  |++|.+++++|+.++.+...+..+.+..+.             .+.++++++.
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~   67 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKR-------------LKISSALLKL   67 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCC-------------CCCCHHHHHH
Confidence            4566889999999999999999974  789999999999999887776644332111             1145788999


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHHH
Q 020906          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGY  203 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G~  203 (320)
                      ++|.|++++.+..++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+++...+|.+++..|+
T Consensus        68 ~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~  147 (302)
T TIGR00817        68 LLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGF  147 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999988777778888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhh-cCCC---Ccc-hHHHHHHHHHH
Q 020906          204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPY---LLS-PGFLVVLCFSC  278 (320)
Q Consensus       204 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~-~~~~---~~~-~~~~~~l~~s~  278 (320)
                      ++++++++++|+|.++.||..++.+.++.+++.|+++.+.+.++|.....++.+... +...   ..+ ...+...+..+
T Consensus       148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (302)
T TIGR00817       148 LSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA  227 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence            999999999999999999988766789999999999999999998876554422111 1000   011 12233233333


Q ss_pred             H-HHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          279 I-LAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       279 ~-~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      . +....|...|.+++++||++.++.+++|+++.+++|++.
T Consensus       228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~  268 (302)
T TIGR00817       228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF  268 (302)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhh
Confidence            3 445567777899999999999999999999999998764

specificities overlap.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.97  E-value=5.1e-30  Score=215.28  Aligned_cols=255  Identities=21%  Similarity=0.311  Sum_probs=227.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (320)
                      ...+++.|+++|+.+++.|||+++..||+....+.+.|.+++.+.+.+++..|..++|                .++.|+
T Consensus         7 ~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----------------~t~aK~   70 (309)
T COG5070           7 ELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----------------LTKAKK   70 (309)
T ss_pred             cchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----------------hhhhhh
Confidence            3567899999999999999999999999999999999999999999999988877765                244689


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-------
Q 020906          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-------  196 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~-------  196 (320)
                      |+|.+++...+++.+..+++|+++|.|++.|+++.+.++..+..++|.+.+-.+..+.+++++....+.++|.       
T Consensus        71 WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~  150 (309)
T COG5070          71 WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKA  150 (309)
T ss_pred             hcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999997       


Q ss_pred             -ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHH
Q 020906          197 -SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLC  275 (320)
Q Consensus       197 -~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~  275 (320)
                       ..| .|++|+..+++..|.|....|+..+-.+....+.+||+++++.|+++.+.+..+||+.- +......+.....+.
T Consensus       151 ~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~  228 (309)
T COG5070         151 QILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMF  228 (309)
T ss_pred             cccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHH
Confidence             345 69999999999999999999998887777889999999999999999999988998642 222223344467889


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhh
Q 020906          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIW  316 (320)
Q Consensus       276 ~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~  316 (320)
                      ++|++++...+++-||++.+|..|+|++|++.+...-+-+.
T Consensus       229 ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGl  269 (309)
T COG5070         229 ISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGL  269 (309)
T ss_pred             HHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence            99999999999999999999999999999999876655443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.96  E-value=7.8e-29  Score=217.28  Aligned_cols=263  Identities=19%  Similarity=0.207  Sum_probs=221.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccH-HHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL-KTLM  122 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  122 (320)
                      .+.-++.|+++|+++.++||+.-.  +|++|.+++.+|+++-++.....++....+.++         .+...+| +++|
T Consensus        17 ~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r---------~r~~~sw~~~Lr   85 (349)
T KOG1443|consen   17 TLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR---------ARVVLSWRDYLR   85 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc---------cccCCcHHHHHH
Confidence            344568999999999999999885  578899999999999999888877754332221         1123555 5788


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHH
Q 020906          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (320)
Q Consensus       123 ~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G  202 (320)
                      +..|+++..+.++.++|+|++|+++++|++.|+.+++|+.+++.++.-||+++.-.+.++++.+|+++.++.+.+++..|
T Consensus        86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~G  165 (349)
T KOG1443|consen   86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEG  165 (349)
T ss_pred             HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCC---CChhhHHHHHHHHHHHHHHHHHH-HhCChh----hhhcCCCCcc-hHHHHH
Q 020906          203 YAVVFLANITTAIYLATIARIGKSSG---LNSFGLMWCNGVICGPLLLLWTF-LRGDLE----TTINFPYLLS-PGFLVV  273 (320)
Q Consensus       203 ~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~l~~~~~~~~~~~l~~~~~-~~ge~~----~~~~~~~~~~-~~~~~~  273 (320)
                      +++.++++++.++++.+.|.++++.+   -+|.+.+++..+++...++|... ++|...    +.+++.+..+ ......
T Consensus       166 f~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~  245 (349)
T KOG1443|consen  166 FFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGL  245 (349)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHH
Confidence            99999999999999999999987654   68999999999999998888765 455422    1222222211 112345


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          274 LCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       274 l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      +.+.|.++|.+..+.|.+..+||.+|.|+.|.+|.++++.++.+
T Consensus       246 i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~i  289 (349)
T KOG1443|consen  246 ISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAII  289 (349)
T ss_pred             HHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999999988764

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.96  E-value=1.9e-27  Score=218.60  Aligned_cols=254  Identities=20%  Similarity=0.270  Sum_probs=212.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-CCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHH
Q 020906           48 AISYMACAVLLVMFNKAALSS-YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLP  126 (320)
Q Consensus        48 ~~~~~~~s~~~~~~NK~ll~~-~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (320)
                      ..+|..+..-. ++++.+..+ ++.++|.++++.|++++.+.........+.+    +           .++..++++++
T Consensus         6 ~~i~~~~~~~g-~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~   69 (303)
T PF08449_consen    6 AGIFGGCCSYG-ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP----K-----------SRKIPLKKYAI   69 (303)
T ss_pred             HHHHHHHHHHH-HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc----C-----------CCcChHHHHHH
Confidence            34444444443 455555554 4445899999999999999888776654311    0           01123678899


Q ss_pred             HHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcc----cc---
Q 020906          127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS----FD---  199 (320)
Q Consensus       127 ~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~----~~---  199 (320)
                      .++++.++..++|.|++|+|+|++++.|++.|+++++++++++|||++++++++++++++|+++++.+|.+    .+   
T Consensus        70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~  149 (303)
T PF08449_consen   70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSS  149 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999998776531    11   


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHH--hCChhhhhcCCCCcchHHHHHH
Q 020906          200 ---FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDLETTINFPYLLSPGFLVVL  274 (320)
Q Consensus       200 ---~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~ge~~~~~~~~~~~~~~~~~~l  274 (320)
                         ..|+.+.+++.+++|.+.+++||..++++.+++++++|++.++.++.++....  +||..+..++.. .+|..+..+
T Consensus       150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l  228 (303)
T PF08449_consen  150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYL  228 (303)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHH
Confidence               23999999999999999999999999999999999999999999999988877  788766555432 345578889


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ++.+++++..+.+.+.+++++||++.++++++|+.+++++|++.
T Consensus       229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~  272 (303)
T PF08449_consen  229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVII  272 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999874

; GO: 0055085 transmembrane transport

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.90  E-value=1.4e-21  Score=171.86  Aligned_cols=234  Identities=16%  Similarity=0.108  Sum_probs=205.8

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhH
Q 020906           70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM  149 (320)
Q Consensus        70 ~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~  149 (320)
                      +|..|.++.+.|-+.+.++.+.+.++.+.+.+..            .|   +++..-+++...++..++..||+|++.|+
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~------------ap---l~~y~~is~tn~~s~~~~yeaLKyvSyPt  111 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGV------------AP---LYKYSLISFTNTLSSWCGYEALKYVSYPT  111 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCCCC------------Cc---hhHHhHHHHHhhcchHHHHHHHHhccchH
Confidence            5889999999999999999988776654332111            12   56778899999999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHHH
Q 020906          150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLANITTAIYLATI  220 (320)
Q Consensus       150 ~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------~~~~~G~~~~l~s~~~~a~~~v~~  220 (320)
                      .++.|++..+.+++.+.+++|+|++..++++..++.+|+.++...+.         ..++.|+.++..+.+++++.+..+
T Consensus       112 q~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQ  191 (327)
T KOG1581|consen  112 QTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQ  191 (327)
T ss_pred             HHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHH
Confidence            99999999999999999999999999999999999999988765421         245899999999999999999999


Q ss_pred             HHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 020906          221 ARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQ  300 (320)
Q Consensus       221 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~  300 (320)
                      +++.+++++++++++++.|+++.+......+..|.+.+...+-. .+|.++..+.+-+.+|.+.+.+.|..+++.+|+++
T Consensus       192 d~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~  270 (327)
T KOG1581|consen  192 DSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTF  270 (327)
T ss_pred             HHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHH
Confidence            99999999999999999999999999888777787766555532 46778999999999999999999999999999999


Q ss_pred             HHHhHhhHHHHHhhhhhhc
Q 020906          301 TICGSFYHWTRLDTIWWAS  319 (320)
Q Consensus       301 sv~g~~K~~~~i~~S~~~~  319 (320)
                      .++.+.|+++.+++|.++.
T Consensus       271 t~I~ttRk~~si~lS~i~f  289 (327)
T KOG1581|consen  271 TTIMTTRKMVSIMLSCIVF  289 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998763

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.88  E-value=2.2e-22  Score=170.73  Aligned_cols=233  Identities=16%  Similarity=0.105  Sum_probs=199.4

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhH
Q 020906           70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM  149 (320)
Q Consensus        70 ~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~  149 (320)
                      .|.+...|.++|+.+..+..-++...+...  +             +|...-+.+..+++.|.+....+|.+++|+|.|+
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~--~-------------~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT  113 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIRKKT--E-------------IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPT  113 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeecccc--c-------------ccCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence            388899999999999998876654432210  0             1111135678899999999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-------ccchHHHHHHHHHHHHHHHHHHHHHH
Q 020906          150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-------SFDFFGYAVVFLANITTAIYLATIAR  222 (320)
Q Consensus       150 ~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~-------~~~~~G~~~~l~s~~~~a~~~v~~~~  222 (320)
                      ..+-|++.|+.+++++.++.+++++|+++++++.+++|++++.+.|-       +.-..|-++.++|.-..++....++|
T Consensus       114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdr  193 (337)
T KOG1580|consen  114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDR  193 (337)
T ss_pred             HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHH
Confidence            99999999999999999999999999999999999999999866532       22247889999999999999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906          223 IGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI  302 (320)
Q Consensus       223 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv  302 (320)
                      +...++-+.-++++|+|+++...+.....++||..+.+.|.. ..|..|+.+.+-++++...+++.|..+...+|+|-||
T Consensus       194 ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~-RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi  272 (337)
T KOG1580|consen  194 IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQ-RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI  272 (337)
T ss_pred             HHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHH-hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence            988888899999999999999999888889999766555433 4566788888899999999999999999999999999


Q ss_pred             HhHhhHHHHHhhhhhh
Q 020906          303 CGSFYHWTRLDTIWWA  318 (320)
Q Consensus       303 ~g~~K~~~~i~~S~~~  318 (320)
                      +.+.|+..+|+.|+++
T Consensus       273 vTTTRKfFTil~SVll  288 (337)
T KOG1580|consen  273 VTTTRKFFTILISVLL  288 (337)
T ss_pred             EeehHHHHHHHHHHHH
Confidence            9999999999999875

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.83  E-value=2.4e-19  Score=155.22  Aligned_cols=261  Identities=14%  Similarity=0.071  Sum_probs=214.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHH
Q 020906           42 RRGANAAISYMACAVLLVMFNKAALSSYNFP-CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT  120 (320)
Q Consensus        42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~-~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (320)
                      .+.+++....++.-+.-=.+..++++..+|. +.+.+|+.|+++-..+.++....  +  ++         +++.+||  
T Consensus        42 ~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~--~~---------k~r~iP~--  106 (367)
T KOG1582|consen   42 TQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--I--QT---------KRRVIPW--  106 (367)
T ss_pred             hhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--e--cc---------cceecch--
Confidence            3455555556666665566788999988996 99999999999876555443221  1  11         1123664  


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc----
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL----  196 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~----  196 (320)
                       |.+..++.+-..+..++|.|+.|+|.|...+.|++..+.+++.+.++-|+|+.+..+.+..++++|.++++..|.    
T Consensus       107 -rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP  185 (367)
T KOG1582|consen  107 -RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP  185 (367)
T ss_pred             -hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC
Confidence             677788888888999999999999999999999999999999999999999999999999999999999988775    


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHH
Q 020906          197 SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF  276 (320)
Q Consensus       197 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~  276 (320)
                      +||..|+...-.+.+++|+-...+++.++.++-++.|+++|..-++.++++..+..+||....+.+-..+.........+
T Consensus       186 NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~  265 (367)
T KOG1582|consen  186 NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFL  265 (367)
T ss_pred             CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHH
Confidence            67889999999999999999999999999988899999999999999999998889999877666533333334445555


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          277 SCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       277 s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      -+..++....+....|+..+|++...+.+.|+.+++++|.++
T Consensus       266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfll  307 (367)
T KOG1582|consen  266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLL  307 (367)
T ss_pred             HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHH
Confidence            566677777777788999999999999999999999999864

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.77  E-value=5.6e-16  Score=139.00  Aligned_cols=230  Identities=17%  Similarity=0.096  Sum_probs=175.2

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHH-HHHHHHHHhh
Q 020906           61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAV-AYLLYMVVSV  139 (320)
Q Consensus        61 ~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si-~~~~~~~~~~  139 (320)
                      ..|+.+++ . ..|..+.+.|++.+.+.+....+.+    +               ++++++..+..+. .+.+...+.+
T Consensus         7 ~~k~~~~~-~-~~~~~~~~~r~~~~~l~l~~~~~~~----~---------------~~~~~~~~~~~~~~~~~l~~~~~~   65 (260)
T TIGR00950         7 VIGQYLEG-Q-VPLYFAVFRRLIFALLLLLPLLRRR----P---------------PLKRLLRLLLLGALQIGVFYVLYF   65 (260)
T ss_pred             HHHHHHhc-C-CCHHHHHHHHHHHHHHHHHHHHHhc----c---------------CHhHHHHHHHHHHHHHHHHHHHHH
Confidence            45998874 2 3578899999998887766554332    1               1122344555554 4677888899


Q ss_pred             hhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc-CcccchHHHHHHHHHHHHHHHHHH
Q 020906          140 ESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFGYAVVFLANITTAIYLA  218 (320)
Q Consensus       140 ~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~-d~~~~~~G~~~~l~s~~~~a~~~v  218 (320)
                      .|+++++++...++.++.|+++.+++.+++|||++++++.++.+.++|+.+.... +.+.+..|+.++++++++++.+.+
T Consensus        66 ~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~  145 (260)
T TIGR00950        66 VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTV  145 (260)
T ss_pred             HHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999886433 345567899999999999999999


Q ss_pred             HHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHH-HHHHhhccch
Q 020906          219 TIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYS-IFLNTTLNSA  297 (320)
Q Consensus       219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~-~~~~i~~~Sa  297 (320)
                      +.|+..++.+.++.....+...++.+++.+.....++...       .+...|..++..++++....+. .+..+++.++
T Consensus       146 ~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  218 (260)
T TIGR00950       146 LYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDP  218 (260)
T ss_pred             HHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999877554445455545677777777777655443211       1334566666677766555444 4888999999


Q ss_pred             hHHHHHhHhhHHHHHhhhhhh
Q 020906          298 VTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       298 lt~sv~g~~K~~~~i~~S~~~  318 (320)
                      .+.++...+.++..++++++.
T Consensus       219 ~~~s~~~~~~pv~~~ll~~~~  239 (260)
T TIGR00950       219 SAASILALAEPLVALLLGLLI  239 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.74  E-value=5.8e-15  Score=135.04  Aligned_cols=246  Identities=10%  Similarity=0.034  Sum_probs=182.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHH
Q 020906           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (320)
Q Consensus        42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (320)
                      -..+...++|+...+..    |+.+++  . .|..++++|++++.+++......++.+.               .+++++
T Consensus        11 ~~~~~~~~iWg~~~~~~----K~~~~~--~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~---------------~~~~~~   68 (292)
T PRK11272         11 GALFALYIIWGSTYLVI----RIGVES--W-PPLMMAGVRFLIAGILLLAFLLLRGHPL---------------PTLRQW   68 (292)
T ss_pred             HHHHHHHHHHhhHHHHH----HHHhcc--C-CHHHHHHHHHHHHHHHHHHHHHHhCCCC---------------CcHHHH
Confidence            34466777888888777    988863  4 4899999999999887766543322110               123455


Q ss_pred             HHHHHHHHHH-HHHHHHhhhhh-cCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc-Cccc
Q 020906          122 MHTLPLAVAY-LLYMVVSVESV-RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSF  198 (320)
Q Consensus       122 ~~~~~~si~~-~~~~~~~~~sl-~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~-d~~~  198 (320)
                      ++....+++. .....+.+.+. ++++++...++-.+.|+++.+++.+ +|||++++++.++++.++|+.+...+ +.+.
T Consensus        69 ~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~  147 (292)
T PRK11272         69 LNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccccc
Confidence            6666777654 45556677888 9999999999999999999999986 69999999999999999999886533 3455


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHH
Q 020906          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (320)
Q Consensus       199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~  278 (320)
                      +..|+.+.+++++++|.|.++.||..++   ++.....+...++.+.+.+.....++..     ....+...|..+++.+
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~  219 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLA  219 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHH
Confidence            6689999999999999999999987542   3445556666777776666654433311     1112344567777777


Q ss_pred             HHHHHHHHH-HHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          279 ILAFFLNYS-IFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       279 ~~~~~~~~~-~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      +++....+. .+..+++.++.+.++...+.++...+++++.
T Consensus       220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~  260 (292)
T PRK11272        220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL  260 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            776665554 4788999999999999999999999999764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.71  E-value=1.1e-14  Score=134.16  Aligned_cols=241  Identities=12%  Similarity=0.060  Sum_probs=169.6

Q ss_pred             HHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhh
Q 020906           60 MFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSV  139 (320)
Q Consensus        60 ~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~  139 (320)
                      ..+.++-++ +++.|.+-+++-++.-.++-......++   +. ++       ..+..++.+++.+.++++-....++.+
T Consensus        30 ~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~---~~-~~-------~~~~~~~~~w~y~lla~~Dv~aN~~~v   97 (334)
T PF06027_consen   30 TFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRR---GF-KK-------WLKVLKRPWWKYFLLALLDVEANYLVV   97 (334)
T ss_pred             HHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcc---cc-cc-------chhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            344555554 7888877666665544332221111111   10 00       000112345667778999999999999


Q ss_pred             hhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------ccchHHHHHHHHHH
Q 020906          140 ESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLAN  210 (320)
Q Consensus       140 ~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------~~~~~G~~~~l~s~  210 (320)
                      .|++|++++..|++.+.+.+++++++++++|+|+++.+++++++.++|+.+....|.         +....|++++++++
T Consensus        98 ~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a  177 (334)
T PF06027_consen   98 LAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGA  177 (334)
T ss_pred             HHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999988765542         12478999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 020906          211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFL  290 (320)
Q Consensus       211 ~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~  290 (320)
                      +++|+++++.|+..+++  +..+.+....+++.++..+..... |+.+..+++  +++..+..++..+++-+......-.
T Consensus       178 ~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p~  252 (334)
T PF06027_consen  178 ILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVPI  252 (334)
T ss_pred             HHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999854  778888888888888877655432 444443332  2334444445445444444444466


Q ss_pred             HhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          291 NTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       291 ~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      +++.+||+.+++.--.-+.-.++++++
T Consensus       253 ~l~~ssAt~~nLsLLTsd~~ali~~i~  279 (334)
T PF06027_consen  253 VLRMSSATFFNLSLLTSDFYALIIDIF  279 (334)
T ss_pred             HHHhCccceeehHHHHhhHHHHHHHHH
Confidence            789999988887666656665555543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.70  E-value=4.9e-14  Score=129.35  Aligned_cols=246  Identities=13%  Similarity=0.119  Sum_probs=172.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (320)
                      .+++.++|+......    |..+++  ++ |..+.++|+.++.+......+.     +   +          .++   +.
T Consensus         9 ~l~~~~~Wg~~~~~~----k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~-----~---~----------~~~---~~   60 (299)
T PRK11453          9 ALLVVVVWGLNFVVI----KVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR-----P---K----------VPL---NL   60 (299)
T ss_pred             HHHHHHHHhhhHHHH----HHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC-----C---C----------Cch---HH
Confidence            467778888888776    988863  54 8999999999876554433211     0   0          122   23


Q ss_pred             HHHHHHHH-HHHHHHhhhhhcC-cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC---ccc
Q 020906          124 TLPLAVAY-LLYMVVSVESVRG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---LSF  198 (320)
Q Consensus       124 ~~~~si~~-~~~~~~~~~sl~~-~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d---~~~  198 (320)
                      .+..++.. .....+...++++ .+.+...++-++.|+++.+++++++|||+++++++++++.++|+.+...++   .+.
T Consensus        61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~  140 (299)
T PRK11453         61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHV  140 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcch
Confidence            44445433 2333355677877 688999999999999999999999999999999999999999998765432   234


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CChhhHHHHHHHHHHHHHHHHHHH-hCChhhhhcCCCCcchHHHHHHHH
Q 020906          199 DFFGYAVVFLANITTAIYLATIARIGKSSG-LNSFGLMWCNGVICGPLLLLWTFL-RGDLETTINFPYLLSPGFLVVLCF  276 (320)
Q Consensus       199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~-~ge~~~~~~~~~~~~~~~~~~l~~  276 (320)
                      +..|+.+++.+++++|.|.++.||..++.+ ........+...++...+...... +++....... ...++..|..++.
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  219 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL-VTIDMTTILSLMY  219 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh-ccCCHHHHHHHHH
Confidence            567999999999999999999999765432 222334444444443333322222 2222100111 1234566888888


Q ss_pred             HHHHHHHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          277 SCILAFFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       277 s~~~~~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      .++++....+.. +..+++.+|.+.++...+.++..+++|++.
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~  262 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL  262 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888877766 677899999999999999999999999864

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.69  E-value=6.1e-14  Score=131.33  Aligned_cols=248  Identities=11%  Similarity=0.032  Sum_probs=169.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHH
Q 020906           53 ACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYL  132 (320)
Q Consensus        53 ~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~  132 (320)
                      .+..++..+-|..++ .+.+ |..+.++|+.++.+++..+...++.+.+           +.+.+++++..+...+++..
T Consensus        23 ~~~~~~~~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----------~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         23 TSVVGISTLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRS-----------LPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             HHHHHHHHHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cCcchHHHHHHHHHHHHHHH
Confidence            345556666799996 3664 6779999999998777655432211100           00124566677777777665


Q ss_pred             HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHH------hccccCcchhhHHHHHhhhhhhhcc-cCc---------
Q 020906          133 LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFL------AGQKYTPPVVGSVGLIILGAFVAGA-RDL---------  196 (320)
Q Consensus       133 ~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~------~~~~~s~~~~~sl~li~~Gv~l~~~-~d~---------  196 (320)
                      ....+.+.+++|++.+...++-++.|+++++++.++      +|||.++++++++++.++|+.+... ++.         
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            555588999999999999999999999999999999      6999999999999999999987532 111         


Q ss_pred             --------------ccc-hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHH-HHhCC-hhhh
Q 020906          197 --------------SFD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGD-LETT  259 (320)
Q Consensus       197 --------------~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~ge-~~~~  259 (320)
                                    +.+ ..|..+.+.+++++|+|.++.||..+++. +......+...++.....+.. ..+++ ... 
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~-  247 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV-  247 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCccc-
Confidence                          112 45999999999999999999999877542 223444454444433333332 22221 111 


Q ss_pred             hcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          260 INFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       260 ~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      +  ....+... ..+++.++...+....-++++++.+|...++..++.+++.+++|++.
T Consensus       248 ~--~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~  303 (358)
T PLN00411        248 W--IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF  303 (358)
T ss_pred             c--eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH
Confidence            1  11123332 23444555433322234789999999999999999999999999874

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.68  E-value=6.4e-14  Score=128.35  Aligned_cols=239  Identities=13%  Similarity=0.080  Sum_probs=165.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (320)
                      .+.++++|+......    |..+++  +| |..+.++|+..+.+++....+.     +..+         + .+   .+.
T Consensus         9 ~l~a~~~Wg~~~~~~----k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~~-----~~~~---------~-~~---~~~   63 (295)
T PRK11689          9 GLIAILLWSTMVGLI----RGVSES--LG-PVGGAAMIYSVSGLLLLLTVGF-----PRLR---------Q-FP---KRY   63 (295)
T ss_pred             HHHHHHHHHHHHHHH----HHHHcc--CC-hHHHHHHHHHHHHHHHHHHccc-----cccc---------c-cc---HHH
Confidence            356777888776655    998874  44 8999999999988777654321     1000         0 11   123


Q ss_pred             HHHHHHHHHHHHHHhhhhhc----CcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---
Q 020906          124 TLPLAVAYLLYMVVSVESVR----GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---  196 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~----~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---  196 (320)
                      .+..++.+.....+.+.+++    +.+.....++.++.|+++.+++++++|||++++++.++++..+|+++...++.   
T Consensus        64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~  143 (295)
T PRK11689         64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS  143 (295)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence            33334444555555556654    45777788999999999999999999999999999999999999988654432   


Q ss_pred             --------ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcch
Q 020906          197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (320)
Q Consensus       197 --------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~  268 (320)
                              +.+..|+.+++.+++++|.|.++.||..++  .++....+   ..+...+.+.....++..      ...++
T Consensus       144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~~------~~~~~  212 (295)
T PRK11689        144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQPA------MVFSL  212 (295)
T ss_pred             hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCcc------ccCCH
Confidence                    123569999999999999999999998654  35554432   222233333222333221      11233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       269 ~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ..|..+++.++.+....+.-+..+++.+|...++...+.+++.++++++.
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~  262 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL  262 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH
Confidence            44656666665544445556889999999999999999999999998764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.7e-16  Score=137.98  Aligned_cols=238  Identities=17%  Similarity=0.219  Sum_probs=180.9

Q ss_pred             HHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhh
Q 020906           63 KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESV  142 (320)
Q Consensus        63 K~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl  142 (320)
                      +.+.++ +-.....+|+.|+++...--.+..  .  +++..+         .++|.   |.++..-..|.....++|.++
T Consensus        23 E~L~~~-~pgsgNLITFaqFlFia~eGlif~--s--kf~~~k---------~kipl---k~Y~i~V~mFF~vnv~NN~al   85 (330)
T KOG1583|consen   23 ELLVRN-EPGSGNLITFAQFLFIATEGLIFT--S--KFFTVK---------PKIPL---KDYAITVAMFFIVNVTNNYAL   85 (330)
T ss_pred             HHHHHh-CCCCeeehHHHHHHHHHHhceeee--c--cccccC---------CCCch---hhhheehheeeeeeeecccee
Confidence            555543 334567899999998776544432  1  121111         12553   455555555556667999999


Q ss_pred             cC-cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc---Ccc--------------cc--hHH
Q 020906          143 RG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR---DLS--------------FD--FFG  202 (320)
Q Consensus       143 ~~-~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~---d~~--------------~~--~~G  202 (320)
                      ++ +|+|.+.+.|+.+++.++++++++.|+|++.+++.|++++.+|+++++..   |..              +.  ..|
T Consensus        86 ~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iG  165 (330)
T KOG1583|consen   86 KFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIG  165 (330)
T ss_pred             eecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHH
Confidence            98 69999999999999999999999999999999999999999999997542   210              11  369


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHH-HHhCChhhhhcC-----C--CCcchHHHHHH
Q 020906          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGDLETTINF-----P--YLLSPGFLVVL  274 (320)
Q Consensus       203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~ge~~~~~~~-----~--~~~~~~~~~~l  274 (320)
                      +.+..++.+.+|...+++|+..++++-++-|.+||++.+++|..+... -+..++..++..     |  +-.-|..|..+
T Consensus       166 i~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL  245 (330)
T KOG1583|consen  166 IALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL  245 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH
Confidence            999999999999999999999999999999999999999999887331 011112222211     1  11236678999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      +.+++..++.--..+.+..+++++|.+++-++|+.+..++|++
T Consensus       246 l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Sii  288 (330)
T KOG1583|consen  246 LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSII  288 (330)
T ss_pred             HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheee
Confidence            9999988887777788889999999999999999999999975

>TIGR00688 rarD rarD protein

Probab=99.63  E-value=5.1e-13  Score=119.82  Aligned_cols=247  Identities=9%  Similarity=-0.025  Sum_probs=164.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-cccccccCCCCCCCCCCCCCcccHH-HH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKIINFTMGDSLMTSDSSSTFVPLK-TL  121 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~  121 (320)
                      .+.+..+|+...+..    |+ ..  +. .|..+.++|++++.+.+..... .++.+... ++       .+..+++ ..
T Consensus         7 ~i~a~~~wg~~~~~~----k~-~~--~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~-~~-------~~~~~~~~~~   70 (256)
T TIGR00688         7 SLLASFLFGYMYYYS----KL-LK--PL-PATDILGHRMIWSFPFMLLSVTLFRQWAALI-ER-------LKRIQKRPLI   70 (256)
T ss_pred             HHHHHHHHHHHHHHH----HH-hc--cC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHH-HH-------HhCcccchHH
Confidence            456677788887766    88 43  34 4889999999998876554332 12110000 00       0001111 12


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchH
Q 020906          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF  201 (320)
Q Consensus       122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~  201 (320)
                      ......+++......+.+.++++++++..+++..+.|+++++++.+++|||+++++++++++.++|+++....+.+.+  
T Consensus        71 ~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~--  148 (256)
T TIGR00688        71 LSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP--  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch--
Confidence            334556666778888999999999999999999999999999999999999999999999999999987643322211  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (320)
Q Consensus       202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~  281 (320)
                        .+++.+++++|.|.+..||..++   +..+.... .....|...+.... +++...   +.......|..++..++++
T Consensus       149 --~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~t  218 (256)
T TIGR00688       149 --WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLIT  218 (256)
T ss_pred             --HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHHH
Confidence              35788999999999999887542   22232221 22333333322221 121110   0111112456666666665


Q ss_pred             HHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          282 FFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       282 ~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      .......+...++.+|...++...+.++..++++++.
T Consensus       219 ~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       219 GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            5555566888999999999999999999999988753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.63  E-value=5.7e-14  Score=124.75  Aligned_cols=196  Identities=12%  Similarity=0.056  Sum_probs=154.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-
Q 020906          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-  196 (320)
Q Consensus       118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~-  196 (320)
                      +++..++...+++|.+...+.+.++++++.+++|+++.+.+++|+++.++++|||.++++|.++++.++|+.+...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4566777888999999999999999999999999999999999999999999999999999999999999998643211 


Q ss_pred             --------c--------cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhh
Q 020906          197 --------S--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI  260 (320)
Q Consensus       197 --------~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~  260 (320)
                              +        ....|++..+++++++|+..++.||++|+.+.+.+.........+.++.++.... .++++..
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~~  172 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAIS  172 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-ccccccc
Confidence                    1        1358999999999999999999999999988888888877788888888766443 2332222


Q ss_pred             c--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          261 N--FPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       261 ~--~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      +  +-+.+++..|..+...++.|...    -.++|+.+...-.....+--+++.++|+++
T Consensus       173 ~~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~l  228 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLL  228 (244)
T ss_pred             cCCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            1  22234555677777777766555    556788887777777777777777776653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.62  E-value=6.2e-15  Score=121.68  Aligned_cols=117  Identities=25%  Similarity=0.309  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcC-----CCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhc---CCC--C-cchHH
Q 020906          202 GYAVVFLANITTAIYLATIARIGKS-----SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTIN---FPY--L-LSPGF  270 (320)
Q Consensus       202 G~~~~l~s~~~~a~~~v~~~~~~~~-----~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~---~~~--~-~~~~~  270 (320)
                      |+++++.++++.|+|+++.|+.+++     .+.++.++++|+++.+.+++++..+..++.+....   ...  . .++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999999988     68999999999999999999998877766542111   111  1 15567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       271 ~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      +..++.+|++++++|++.|.+++++||+|++|+|++|+++++++|+++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~  128 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF  128 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh
Confidence            888999999999999999999999999999999999999999999874

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.62  E-value=1.2e-12  Score=119.94  Aligned_cols=235  Identities=17%  Similarity=0.050  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (320)
Q Consensus        45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (320)
                      +++.+.|...+.    ..|+.+++  ++ |..+.++|++++.+++....+.++.+                .++++++..
T Consensus        18 ~la~~~~~~~~~----~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~~----------------~~~~~~~~~   74 (293)
T PRK10532         18 LIAMASIQSGAS----LAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRLR----------------FAKEQRLPL   74 (293)
T ss_pred             HHHHHHHHhhHH----HHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhcc----------------CCHHHHHHH
Confidence            455556665555    45999974  44 77899999999988776654321111                234556677


Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc---cCcccchH
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFF  201 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~---~d~~~~~~  201 (320)
                      +..++++.....+.+.+++++|.+...++..+.|+++.+++    +|++.+  ...+.+.++|+.+...   +..+.+..
T Consensus        75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~  148 (293)
T PRK10532         75 LFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLT  148 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChH
Confidence            77888777778888999999999999999999999999887    355544  4456677888876532   22234567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (320)
Q Consensus       202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~  281 (320)
                      |+.+++.+++++|.|.+..||..+++  ++.... +...++...+.+.....+. .      ...++..|..++..++++
T Consensus       149 G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~~-~~~~~~~~~l~~~~~~~~~-~------~~~~~~~~~~~l~lgv~~  218 (293)
T PRK10532        149 GAALALGAGACWAIYILSGQRAGAEH--GPATVA-IGSLIAALIFVPIGALQAG-E------ALWHWSILPLGLAVAILS  218 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccC--CchHHH-HHHHHHHHHHHHHHHHccC-c------ccCCHHHHHHHHHHHHHH
Confidence            99999999999999999999987643  555554 4455666666665543322 0      112334455556677777


Q ss_pred             HHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          282 FFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       282 ~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ....+.. +..+++.+|...++...+.++..++++++.
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~  256 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF  256 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH
Confidence            7666654 888999999999999999999999999864

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.62  E-value=7.1e-13  Score=121.51  Aligned_cols=246  Identities=11%  Similarity=-0.039  Sum_probs=160.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (320)
Q Consensus        45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (320)
                      +++..+|....+..    |.+ .  +.+ |..+.++|++++.+.+......++ +.+...        ++..++++....
T Consensus        14 l~a~~~wg~~~~~~----k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~--------~~~~~~~~~~~~   76 (296)
T PRK15430         14 LAAYFIWGIAPAYF----KLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLK--------TLIQTPQKIFML   76 (296)
T ss_pred             HHHHHHHHHHHHHH----HHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHH--------HHHcCHHHHHHH
Confidence            45556666666544    875 3  354 889999999998875544332211 000000        000022333323


Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHHHH
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYA  204 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G~~  204 (320)
                      ...++.......+.+.+++++|++...++..+.|+++++++++++|||++++++.++++..+|+.+....+.+.    ..
T Consensus        77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~  152 (296)
T PRK15430         77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PI  152 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cH
Confidence            33344566778899999999999999999999999999999999999999999999999999998864322221    15


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcch-HHHHHHHHHHHHHHH
Q 020906          205 VVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP-GFLVVLCFSCILAFF  283 (320)
Q Consensus       205 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~-~~~~~l~~s~~~~~~  283 (320)
                      +++++++++|.|.++.||..++...+......+..+++.+...+.   ..+..  ...  ..++ ..+..+...++.+..
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~--~~~~~~~~~~~~~~g~~t~i  225 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSST--SHM--GQNPMSLNLLLIAAGIVTTV  225 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCc--ccc--cCCcHHHHHHHHHHHHHHHH
Confidence            688899999999999988754322222333334444444333211   11100  000  1112 123344445555555


Q ss_pred             HHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          284 LNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       284 ~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ..+.-+..+++.+|...++...+..+..++.+|+.
T Consensus       226 ~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~  260 (296)
T PRK15430        226 PLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTF  260 (296)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            55666888999999999999999999999999864

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.52  E-value=1.3e-12  Score=114.21  Aligned_cols=196  Identities=19%  Similarity=0.173  Sum_probs=152.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-----
Q 020906          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-----  196 (320)
Q Consensus       122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~-----  196 (320)
                      +..+|.+++=.....+-+.+|.+++.+.+|++|....+|+-+++..+++++...++|+++..+++|++..+..|.     
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            346778888777777889999999999999999999999999999999999999999999999999998766543     


Q ss_pred             -----ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHH-----HhCC---------hh
Q 020906          197 -----SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTF-----LRGD---------LE  257 (320)
Q Consensus       197 -----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-----~~ge---------~~  257 (320)
                           +--..|..+.+++.+.-|.+.++.+|.+++++.+|.+..-|...++..++-....     ..|+         ++
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e  246 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE  246 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence                 2236899999999999999999999999999999999999999888665543321     1121         11


Q ss_pred             hhhc-CC-CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          258 TTIN-FP-YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       258 ~~~~-~~-~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      +..+ +. -...|.....+...-+.-.+.|++...+.|..|+.|.++...+|+.++.++|+.
T Consensus       247 D~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~  308 (372)
T KOG3912|consen  247 DWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA  308 (372)
T ss_pred             hHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence            1000 00 001122222222222233457999999999999999999999999999998875

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.42  E-value=2.5e-10  Score=103.80  Aligned_cols=193  Identities=14%  Similarity=0.095  Sum_probs=147.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC--
Q 020906          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD--  195 (320)
Q Consensus       118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d--  195 (320)
                      +++..++...+++|.+.+-+...++.+.+.++||+.-.+..+.|.++.+++++||.++++|.++++...|+.+...+.  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            345667788888999999899999999999999999999999999999999999999999999999999999875211  


Q ss_pred             ---------cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh--hcCCC
Q 020906          196 ---------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT--INFPY  264 (320)
Q Consensus       196 ---------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~--~~~~~  264 (320)
                               .+-.+.|+...+.+++.+++-.++.+|++|+.+.+.|-.......++.++.+.....+ |++..  ..+-+
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~  247 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFY  247 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccc
Confidence                     1234789999999999999999999999999888888888888888888888765543 33222  12334


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhh
Q 020906          265 LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTI  315 (320)
Q Consensus       265 ~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S  315 (320)
                      .++...|..++.+++.|...+    .++|+.....-.....+-.+++.+.|
T Consensus       248 G~s~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S  294 (345)
T KOG2234|consen  248 GYSSIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVAS  294 (345)
T ss_pred             cccHHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            467777888888888776664    34455543333333333333333333

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.40  E-value=4e-12  Score=115.43  Aligned_cols=178  Identities=19%  Similarity=0.182  Sum_probs=130.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc----
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL----  196 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~----  196 (320)
                      .|.-+-.+.++.+..++.|.||++.+|+..+++.+++-+||..++.++.+||+++.+.+++++-+.|+++.+.+|.    
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence            3334555566678888999999999999999999999999999999999999999999999999999999887754    


Q ss_pred             ----ccchHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCChhhHHHHHHHHHHHHHHHHHHH---hCChhhhhcCCCCcc
Q 020906          197 ----SFDFFGYAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFL---RGDLETTINFPYLLS  267 (320)
Q Consensus       197 ----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~---~ge~~~~~~~~~~~~  267 (320)
                          +-...|..+++++++++|+|.++.||...++  ++|--...-|..++.+.++.|..++   +++  +-++.|.  +
T Consensus       239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~--e~F~lP~--~  314 (416)
T KOG2765|consen  239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE--ERFELPS--S  314 (416)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc--CcccCCC--C
Confidence                2237899999999999999999999988766  4555555558888887777764432   222  2234443  3


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906          268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI  302 (320)
Q Consensus       268 ~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv  302 (320)
                      ..+-..++.+++..++--|.=.+..-.|||++.++
T Consensus       315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tl  349 (416)
T KOG2765|consen  315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTL  349 (416)
T ss_pred             ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhhee
Confidence            33333333333333333343355566778776554

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.37  E-value=2.1e-09  Score=97.25  Aligned_cols=241  Identities=14%  Similarity=0.104  Sum_probs=159.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHH
Q 020906           48 AISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL  127 (320)
Q Consensus        48 ~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (320)
                      .+.|.......    |.....  ...+....+.|.....+......+.++.+.+           +.+.+  ..+..+..
T Consensus        16 ~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~   76 (292)
T COG0697          16 GLLWGLSFIAL----KLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLR-----------PALRP--WLLLLLLA   76 (292)
T ss_pred             HHHHHHHHHHH----HHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhccccc-----------ccccc--hHHHHHHH
Confidence            34454444443    555542  2234455566888777663333332211000           00011  12333444


Q ss_pred             HHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHH-HHhccccCcchhhHHHHHhhhhhhhcccCcccc---hHHH
Q 020906          128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY-FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD---FFGY  203 (320)
Q Consensus       128 si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~-~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~---~~G~  203 (320)
                      .+.......+.+.++++++++..+++.++.|+++.+++. +++|||++++++.++++...|+.+....+...+   ..|.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~  156 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGL  156 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHH
Confidence            455677777889999999999999999999999999997 777999999999999999999999877655432   5899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHH-HHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906          204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWC-NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (320)
Q Consensus       204 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~  282 (320)
                      .+++.+++++|.+.+..|+..   +.++....++ ...  ...+........+..      ...+...|..+...++++.
T Consensus       157 ~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         157 LLALAAALLWALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHHHHH
Confidence            999999999999999999887   3456666553 222  111111111111111      1123344666777777776


Q ss_pred             HH-HHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          283 FL-NYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       283 ~~-~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      .. .+..+...++.++...+.......+..+..+++.
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~  262 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL  262 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            54 4444788999999999999988888888766653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.34  E-value=5.8e-10  Score=101.47  Aligned_cols=189  Identities=17%  Similarity=0.125  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC-cccc
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-LSFD  199 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d-~~~~  199 (320)
                      +......++.......+.+.++++.+++....+..+.|+++.+++++++||+++++++.++.+++.|+.+....+ .+.+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~  142 (281)
T TIGR03340        63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHR  142 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccc
Confidence            333444445567777788999999999999999999999999999999999999999999999999998865433 2345


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChh-hHHHHH---HHHH-HHHHHHHHHHhCChhhhhcCCCCcchHHHHHH
Q 020906          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSF-GLMWCN---GVIC-GPLLLLWTFLRGDLETTINFPYLLSPGFLVVL  274 (320)
Q Consensus       200 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~-~l~~~~---~~~~-~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l  274 (320)
                      ..|+.++++++++++.|.+..|+..++.  ++. ....+.   .... .+.... ....++..  .   ...+...+..+
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~---~~~~~~~~~~~  214 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALGYLGIGFLAMGWPFLLL-YLKRHGRS--M---FPYARQILPSA  214 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccch--hcccccHHHHHHHHHHHHHHHHHH-HHHHhccc--h---hhhHHHHHHHH
Confidence            6789999999999999999888764322  222 122222   1121 222221 11112210  0   01111223333


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      ...++.+......-+..+++.++...+....+..+..++++++
T Consensus       215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~  257 (281)
T TIGR03340       215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIW  257 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHH
Confidence            3444444444445578889999988888888888888888865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.15  E-value=2.5e-08  Score=91.17  Aligned_cols=233  Identities=11%  Similarity=0.036  Sum_probs=154.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (320)
Q Consensus        45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (320)
                      +.+++.|+...+..    |++.   +++.+...   +..++.++.......-  +.+..            .+++.+..-
T Consensus         7 lia~~~wGs~g~~~----k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~--~~~~~------------~~~~~~~~g   62 (290)
T TIGR00776         7 LIPALFWGSFVLIN----VKIG---GGPYSQTL---GTTFGALILSIAIAIF--VLPEF------------WALSIFLVG   62 (290)
T ss_pred             HHHHHHHhhhHHHH----hccC---CCHHHHHH---HHHHHHHHHHHHHHHH--hCCcc------------cccHHHHHH
Confidence            56777888888765    6655   45544332   4555554444332211  11100            012223333


Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHh-hHHHHHHHHHHHHhccccCcch----hhHHHHHhhhhhhhcccCcc--
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPV----VGSVGLIILGAFVAGARDLS--  197 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks-~~p~~~~l~~~~~~~~~~s~~~----~~sl~li~~Gv~l~~~~d~~--  197 (320)
                      +..++.+.....+...+.++++++....+-. +.+++..+.+.+++||+.++++    +++++++++|+++.+..+.+  
T Consensus        63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~  142 (290)
T TIGR00776        63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA  142 (290)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence            4445557777789999999999999988888 8888999999999999999999    99999999999886543211  


Q ss_pred             -----cc-hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH---HHH-HHHHHHHHHHhCChhhhhcCCCCcc
Q 020906          198 -----FD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG---VIC-GPLLLLWTFLRGDLETTINFPYLLS  267 (320)
Q Consensus       198 -----~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~---~~~-~~~l~~~~~~~ge~~~~~~~~~~~~  267 (320)
                           .+ ..|+++++++.++++.|.+..|+.    +.+|.+..+...   .++ ..++.+.   . +     + ....+
T Consensus       143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-----~-~~~~~  208 (290)
T TIGR00776       143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-----A-KPLKK  208 (290)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH---h-c-----c-cchHH
Confidence                 33 689999999999999999999875    257777744433   222 2222222   0 0     0 11112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-HHHhh-ccchhHHHHHhHhhHHHHHhhhhh
Q 020906          268 PGFLVVLCFSCILAFFLNYSI-FLNTT-LNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       268 ~~~~~~l~~s~~~~~~~~~~~-~~~i~-~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      ...+ .....|++. ...+.. +...+ +..+.+.++......+..++.|++
T Consensus       209 ~~~~-~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~  258 (290)
T TIGR00776       209 YAIL-LNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGIL  258 (290)
T ss_pred             HHHH-HHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHH
Confidence            2223 333477774 444434 46677 899999999999999999988875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.88  E-value=2.1e-09  Score=93.77  Aligned_cols=225  Identities=11%  Similarity=0.038  Sum_probs=145.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccc--ccCCCCCCCCCCCCCcccHHHHH
Q 020906           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIIN--FTMGDSLMTSDSSSTFVPLKTLM  122 (320)
Q Consensus        45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  122 (320)
                      ++..+. ++.+.++++..|-+..     .|..+...++++-.+..+.+.-..+-.  .|+.                 -|
T Consensus        41 ~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g-----------------~R   97 (346)
T KOG4510|consen   41 LLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPVIGPEG-----------------KR   97 (346)
T ss_pred             eehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeeeecCCC-----------------cE
Confidence            344444 5555566666666553     366677777655555554433211111  1110                 01


Q ss_pred             HH-HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc-----ccCc
Q 020906          123 HT-LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-----ARDL  196 (320)
Q Consensus       123 ~~-~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~-----~~d~  196 (320)
                      ++ +.=++.........++|++|++++-+.++...+|.||.+++++++||++++...++..+.+.||++..     .||.
T Consensus        98 ~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~  177 (346)
T KOG4510|consen   98 KWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDT  177 (346)
T ss_pred             EEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCC
Confidence            22 22244445666788999999999999999999999999999999999999999999999999998842     2221


Q ss_pred             ---------ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcc
Q 020906          197 ---------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS  267 (320)
Q Consensus       197 ---------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~  267 (320)
                               +.+..|.+.++.++++.|---+..|++-|+.  +..-.+.|-+.+..+..++.....|++    ..|+.  
T Consensus       178 t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~----~lP~c--  249 (346)
T KOG4510|consen  178 TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIGAV----QLPHC--  249 (346)
T ss_pred             ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhccce----ecCcc--
Confidence                     2356788888888887776666777776643  444455566667776666655555654    23332  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHH--HHHhhccchhHH
Q 020906          268 PGFLVVLCFSCILAFFLNYSI--FLNTTLNSAVTQ  300 (320)
Q Consensus       268 ~~~~~~l~~s~~~~~~~~~~~--~~~i~~~Salt~  300 (320)
                      ...|+.++.-|+.||..++..  -.-+++.+|...
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvai  284 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAI  284 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeeh
Confidence            223556666678888877655  334667776543

>TIGR00803 nst UDP-galactose transporter

Probab=98.86  E-value=3e-08  Score=87.03  Aligned_cols=165  Identities=16%  Similarity=0.117  Sum_probs=113.8

Q ss_pred             cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------------------------c
Q 020906          145 VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------------------------S  197 (320)
Q Consensus       145 ~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------------------------~  197 (320)
                      +++|.+...|+..++++++.+....+||++..++++..++..|+......|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            6889999999999999999999999999999999999999999885322221                           1


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhC----ChhhhhcCC--CCcchHHH
Q 020906          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG----DLETTINFP--YLLSPGFL  271 (320)
Q Consensus       198 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g----e~~~~~~~~--~~~~~~~~  271 (320)
                      ..+.|....+.+.++.+.-.++.++..|+++.+     +|.+.+..+...+.....+    +.....+.+  ..++...|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            235677777888888888889999887655333     5555444444433221111    111111111  12233334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       272 ~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ..++.+++    ...+..+++|+.++.+.+++.+++++++.++|++.
T Consensus       157 ~~~~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~  199 (222)
T TIGR00803       157 IVGLLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL  199 (222)
T ss_pred             HHHHHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444333    34457889999999999999999999999999754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.77  E-value=7.1e-06  Score=71.51  Aligned_cols=232  Identities=16%  Similarity=0.104  Sum_probs=170.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-cccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906           46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (320)
Q Consensus        46 ~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (320)
                      ..+.++...+.     -|.++...   -|.-.+++|..++.+++....| ++.                 +.++++++.+
T Consensus        20 amvsiq~Gas~-----Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~-----------------r~~~~~~~~~   74 (292)
T COG5006          20 AMVSIQSGASF-----AKSLFPLV---GAAGVTALRLAIAALILLALFRPWRR-----------------RLSKPQRLAL   74 (292)
T ss_pred             HHHHHHhhHHH-----HHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHh-----------------ccChhhhHHH
Confidence            34445555554     37777633   3557899999998877665433 221                 1345667888


Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc---cCcccchH
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFF  201 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~---~d~~~~~~  201 (320)
                      ...++....++.+-+.|++.+|.+....+-.+.|+.+.++..    ||  .+....+.+.+.|..+..-   +..+.|+.
T Consensus        75 ~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~  148 (292)
T COG5006          75 LAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPV  148 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHH
Confidence            999999999999999999999999999999999999887763    22  3444556677778766432   23467899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (320)
Q Consensus       202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~  281 (320)
                      |..+++.+..|++.|.+..||.-+  ..+...-+-+-..++..+.+|+.....+       +...+|.....-+..++++
T Consensus       149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlS  219 (292)
T COG5006         149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLS  219 (292)
T ss_pred             HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHh
Confidence            999999999999999999999875  2245555566677777777777553222       2234566566667778888


Q ss_pred             HHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          282 FFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       282 ~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      ..+-|+. ....++.++-++++.-.+++..--+.+++
T Consensus       220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i  256 (292)
T COG5006         220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLI  256 (292)
T ss_pred             cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHH
Confidence            8887776 88899999999999999998877766654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.72  E-value=1.7e-07  Score=73.81  Aligned_cols=117  Identities=15%  Similarity=0.187  Sum_probs=90.9

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHH-HHHHHHH
Q 020906           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLYMVV  137 (320)
Q Consensus        59 ~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~-~~~~~~~  137 (320)
                      ...+|...++  ++ |...+++|+..+.+ ..........+..            ++.+.+++......+++ ......+
T Consensus         7 ~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    7 SVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPF------------KNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             HHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccc------------cCCChhhhhhhhHhhccceehHHHH
Confidence            4567888875  44 77899999999986 4333322111100            11334555666777766 5788889


Q ss_pred             hhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       138 ~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      .+.++++.+++..+++..+.|+++.+++++++||+++++++.++++++.|+.+.
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.67  E-value=4.4e-05  Score=68.10  Aligned_cols=248  Identities=12%  Similarity=0.019  Sum_probs=157.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccc--ccccCCCCCCCCCCCCCcccHHH
Q 020906           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKI--INFTMGDSLMTSDSSSTFVPLKT  120 (320)
Q Consensus        43 ~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  120 (320)
                      ..++++.+|..-.. +.++-|.+-.   . .+..+...|.+.+...+.......+  .+..+..        +  -| +.
T Consensus         8 Gil~~l~Ay~lwG~-lp~y~kll~~---~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~--------~--~p-~~   71 (293)
T COG2962           8 GILLALLAYLLWGL-LPLYFKLLEP---L-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLL--------K--QP-KT   71 (293)
T ss_pred             hhHHHHHHHHHHHH-HHHHHHHHcc---C-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------h--Cc-HH
Confidence            34454554444443 3456677764   2 3678899999988876655433211  1111000        0  11 33


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccch
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDF  200 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~  200 (320)
                      +-.....+++...+.....++...-.+=....-....|++.++++.+++|||.++.+++++.+..+||..-.+.--++++
T Consensus        72 ~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpw  151 (293)
T COG2962          72 LLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPW  151 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence            34445555556666666677777766667777778999999999999999999999999999999999997776666776


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHH
Q 020906          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL  280 (320)
Q Consensus       201 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~  280 (320)
                      ....    =++.++.|... ||..   ++++.+-......+-.|..+.+....++-.+..   ...++..+..+++.|..
T Consensus       152 val~----la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~aG~v  220 (293)
T COG2962         152 VALA----LALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVLAGLV  220 (293)
T ss_pred             HHHH----HHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHHhhHH
Confidence            5443    35678888865 4433   456776666666666666666655444433211   11233346666666666


Q ss_pred             HHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          281 AFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       281 ~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      +..--..-...-|+.+=-+.-+..-..+..+.+++++
T Consensus       221 TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~  257 (293)
T COG2962         221 TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVL  257 (293)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5443222233457777778888888888888777765

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.65  E-value=5.8e-08  Score=81.25  Aligned_cols=173  Identities=17%  Similarity=0.229  Sum_probs=125.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc--cc
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--SF  198 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~--~~  198 (320)
                      +++..|.++++....+....+++.++.+..+.+..+.-.|+.+++++.+|+++...++++.++.+.|+++.++.|-  ..
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999887664  34


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH--------HHHHHHHHHHHHHhCChhhhhcCCCCcchHH
Q 020906          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG--------VICGPLLLLWTFLRGDLETTINFPYLLSPGF  270 (320)
Q Consensus       199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~--------~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~  270 (320)
                      ++.|+.+++.|+...|+|.+..|+...+.++.  +.-.+++        ..+.|.+..  .++|- +...++..  .|  
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL--~~T~V-E~~qsFA~--~P--  203 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALIL--AFTGV-EHLQSFAA--AP--  203 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHH--HHhch-HHHHHHhh--CC--
Confidence            68999999999999999999999998765433  2222222        122222221  23331 11111111  11  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI  302 (320)
Q Consensus       271 ~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv  302 (320)
                      |..+...+.+....|+..+.-+..+.|+-.|+
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISi  235 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISI  235 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhhee
Confidence            55555555566666666655555566655543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.58  E-value=2.6e-07  Score=72.29  Aligned_cols=75  Identities=11%  Similarity=0.209  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHH-HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcc
Q 020906          122 MHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS  197 (320)
Q Consensus       122 ~~~~~~si~~~-~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~  197 (320)
                      ..+...+++.. .+..+...|+++.+ +...++.++.|+++.+++.+++|||++++++.++.++.+|+++..++|.+
T Consensus        35 ~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   35 LWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            34455566554 77889999999999 68889999999999999999999999999999999999999998887754

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.25  E-value=9.9e-06  Score=63.36  Aligned_cols=119  Identities=16%  Similarity=0.207  Sum_probs=92.0

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHH-HcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 020906           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLR-RWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV  137 (320)
Q Consensus        59 ~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~  137 (320)
                      .++-|.-+++.   .|.+=+.+|.++..+.+.... ..|+.+-+            ..++.|.+..+..-++.-.++..+
T Consensus        19 ~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~~~~------------~~~~~k~~lflilSGla~glswl~   83 (140)
T COG2510          19 PIFAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNWQAG------------GEIGPKSWLFLILSGLAGGLSWLL   83 (140)
T ss_pred             HHHHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCceecc------------cccCcceehhhhHHHHHHHHHHHH
Confidence            45669888743   367788888888776665443 33433221            113444455556666777888889


Q ss_pred             hhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       138 ~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      .+.+++.-.+|-..-+..++|+++.+++++++|||++.++++++.++++|+.+.+
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.20  E-value=6.5e-05  Score=67.11  Aligned_cols=125  Identities=13%  Similarity=0.047  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (320)
Q Consensus        45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (320)
                      +.+.+.|...+    +.+|...++++. .+..+..+++.++.+.+.........+    ..          .+.+.+...
T Consensus       134 l~a~~~~a~~~----~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~----------~~~~~~~~~  194 (260)
T TIGR00950       134 LGSGISFALGT----VLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPN----PQ----------ALSLQWGAL  194 (260)
T ss_pred             HHHHHHHHHHH----HHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCC----CC----------cchHHHHHH
Confidence            34444444444    446888765432 234556578888877666554322100    00          123444445


Q ss_pred             HHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhh
Q 020906          125 LPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGA  188 (320)
Q Consensus       125 ~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv  188 (320)
                      +-.+++. .....+.+.++++.+++...++..+.|++++++++++++|++++.++.+..+++.|+
T Consensus       195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            5555553 567778999999999999999999999999999999999999999999999999986

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.12  E-value=9.8e-07  Score=76.83  Aligned_cols=228  Identities=12%  Similarity=0.080  Sum_probs=147.8

Q ss_pred             HHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 020906           55 AVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY  134 (320)
Q Consensus        55 s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~  134 (320)
                      +.+..+.|.++-. .+.+.|..=+++.+..-+++-..+..++. +               .+. -.+++.+.+++.=.-.
T Consensus        30 ~t~~a~tss~la~-k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~---------------~~~-~~~~hYilla~~DVEa   91 (336)
T KOG2766|consen   30 ITSTAFTSSELAR-KGINAPTSQTFLNYVLLALVYGPIMLFRR-K---------------YIK-AKWRHYILLAFVDVEA   91 (336)
T ss_pred             HHcchhhhHHHHh-ccCCCccHHHHHHHHHHHHHHhhHHHhhh-H---------------HHH-HHHHHhhheeEEeecc
Confidence            3444556666655 35677866555554433332222222111 0               011 2345666666655555


Q ss_pred             HHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc--------ccchHHHHHH
Q 020906          135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--------SFDFFGYAVV  206 (320)
Q Consensus       135 ~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~--------~~~~~G~~~~  206 (320)
                      +++--.+.+|++....+.+-.-..+.+++++++++|.|+.+.++.++++.+.|+++....|.        +....|+++.
T Consensus        92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lv  171 (336)
T KOG2766|consen   92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLV  171 (336)
T ss_pred             cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEE
Confidence            55566889999999999999999999999999999999999999999999999988655443        2236899999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHH
Q 020906          207 FLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY  286 (320)
Q Consensus       207 l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~  286 (320)
                      ++++-++|+-++..+.+.|  +.+..+++-...+++.++..+-.+.+..  .... -+ +|+.. ...+...++-| +-+
T Consensus       172 i~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~~--~~~t-l~-w~~~i-~~yl~f~L~MF-llY  243 (336)
T KOG2766|consen  172 IAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFERH--HVST-LH-WDSAI-FLYLRFALTMF-LLY  243 (336)
T ss_pred             EecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhcc--ceee-Ee-ehHHH-HHHHHHHHHHH-HHH
Confidence            9999999999999999988  4588899988888888887765332221  1111 11 22221 12222222222 233


Q ss_pred             HH-HHHhhccchhHHHHHhHhhH
Q 020906          287 SI-FLNTTLNSAVTQTICGSFYH  308 (320)
Q Consensus       287 ~~-~~~i~~~Salt~sv~g~~K~  308 (320)
                      +. =.++|.+|+..+++.--..+
T Consensus       244 sl~pil~k~~~aT~~nlslLTsD  266 (336)
T KOG2766|consen  244 SLAPILIKTNSATMFNLSLLTSD  266 (336)
T ss_pred             HhhHHheecCCceEEEhhHhHHH
Confidence            33 45678888877665443333

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.95  E-value=7.5e-05  Score=58.19  Aligned_cols=64  Identities=19%  Similarity=0.179  Sum_probs=59.1

Q ss_pred             HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      +.+....++...+++.+|++....+-++.++++.+.+++++||++++++++++.++++|+++.+
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3467788889999999999999999999999999999999999999999999999999998754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.78  E-value=0.0009  Score=63.02  Aligned_cols=122  Identities=11%  Similarity=0.125  Sum_probs=81.9

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhh
Q 020906           61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVE  140 (320)
Q Consensus        61 ~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~  140 (320)
                      +.|....+  +|.+..++++|..+..+........-  +.++...     . ....+...+ .++-.++.-.+...+.|+
T Consensus       207 l~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~--~~~~~~~-----~-~~~~~~~~~-~i~y~~i~t~lay~lw~~  275 (358)
T PLN00411        207 LQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVV--EKNNPSV-----W-IIHFDITLI-TIVTMAIITSVYYVIHSW  275 (358)
T ss_pred             HHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHH--ccCCccc-----c-eeccchHHH-HHHHHHHHHHHHHHHHHH
Confidence            44666553  45556778888887766554332210  0000000     0 000122211 123233433456668999


Q ss_pred             hhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          141 SVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       141 sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      ++++.+.+...+...+.|++.+++++++++|++++.++++.++++.|+.+...
T Consensus       276 ~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        276 TVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999998754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.74  E-value=0.0012  Score=54.00  Aligned_cols=136  Identities=13%  Similarity=0.066  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHHHHHHH
Q 020906           54 CAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL  127 (320)
Q Consensus        54 ~s~~~~~~NK~ll~~-----~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (320)
                      ++..-.++.|..+++     .+.+ |..+..+....+++.+...... +..+..+... +. ..++...+.+.+..++..
T Consensus        11 ~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~   87 (153)
T PF03151_consen   11 FSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFS-EI-FGEELSSDPNFIFLLILS   87 (153)
T ss_pred             HHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-Hh-hhhhhcchHHHHHHHHHH
Confidence            333444556777765     4554 5666666666666665554322 1111000000 00 000000022344555666


Q ss_pred             HHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       128 si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      +++.......+...+++++.-+++++.....+++.+++.++++|+++..++.++.+.+.|+.+.+
T Consensus        88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            67777888899999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.68  E-value=0.002  Score=58.86  Aligned_cols=110  Identities=14%  Similarity=0.146  Sum_probs=81.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcCcchhHHHH
Q 020906           74 ANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLYMVVSVESVRGVNVPMYTT  152 (320)
Q Consensus        74 p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~-~~~~~~~~~~sl~~~svs~~~v  152 (320)
                      +...+.+|+.++...+............            ...+.+.+..+.-.+++ ..+...+.+.++++.+.+...+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLT------------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCccc------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence            4567788988887765554322110000            00123444555555654 3466678999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC
Q 020906          153 LRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD  195 (320)
Q Consensus       153 ~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d  195 (320)
                      ...+.|++.+++++++++|++++.++.+..+++.|+.+....+
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998865543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.53  E-value=0.015  Score=52.21  Aligned_cols=117  Identities=12%  Similarity=0.107  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHH-HHHhhHHHHHHHHHHHHhccccCcchhh----HHHHHhhhhhhhcc
Q 020906          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLAGQKYTPPVVG----SVGLIILGAFVAGA  193 (320)
Q Consensus       119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~-v~ks~~p~~~~l~~~~~~~~~~s~~~~~----sl~li~~Gv~l~~~  193 (320)
                      +.+..-+..++++.+.......|++++.+|... +.-....+.+.+.++++++|..+...+.    +++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            444555777889999999999999998777544 3336778889999999999988776654    88899999999877


Q ss_pred             cCccc--------chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH
Q 020906          194 RDLSF--------DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG  239 (320)
Q Consensus       194 ~d~~~--------~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~  239 (320)
                      .|.+.        ...|+...+++.+.+..|.+..|-    .+.|+++..+=.+
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqa  172 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQA  172 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHH
Confidence            65321        256999999999999999998664    3568888776444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.46  E-value=0.0057  Score=55.91  Aligned_cols=69  Identities=16%  Similarity=0.163  Sum_probs=60.4

Q ss_pred             HHHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          124 TLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       124 ~~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      .+-.+++- .+...+.+.++++.+.+...+.-.+.|++..++++++++|+++..++++..+++.|++...
T Consensus       211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        211 GLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            34455543 4566688999999999999999999999999999999999999999999999999988764

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.43  E-value=0.0043  Score=56.75  Aligned_cols=76  Identities=13%  Similarity=0.092  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      .+.+-.++-.++...+..++.+.++++.+.+.....-.+.|++..++++++++|+++..++++.++++.|+.+...
T Consensus       212 ~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        212 LPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            3444444545555566777899999999999999999999999999999999999999999999999999987643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.43  E-value=0.0066  Score=55.63  Aligned_cols=79  Identities=11%  Similarity=0.020  Sum_probs=65.4

Q ss_pred             cHHHHHHHHHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC
Q 020906          117 PLKTLMHTLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD  195 (320)
Q Consensus       117 ~~~~~~~~~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d  195 (320)
                      +.+.+..++-++++- .+...+.+.++++.+.........+.|++..++++++++|+++..++++..++++|+.+...+.
T Consensus       210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            344455555555543 4566688899999999999999999999999999999999999999999999999998865443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.23  E-value=0.0021  Score=51.36  Aligned_cols=71  Identities=15%  Similarity=0.230  Sum_probs=61.0

Q ss_pred             HHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHH--HhccccCcchhhHHHHHhhhhhhhcccC
Q 020906          125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYF--LAGQKYTPPVVGSVGLIILGAFVAGARD  195 (320)
Q Consensus       125 ~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~--~~~~~~s~~~~~sl~li~~Gv~l~~~~d  195 (320)
                      +..+ +.+.+..++.+.+++..+++...-..+..+..+.+.++.  ++||++++.+++++.++++|+.+...++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            3344 456788889999999999999999999998888888885  8999999999999999999999876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.20  E-value=0.0027  Score=57.61  Aligned_cols=66  Identities=14%  Similarity=0.203  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l  190 (320)
                      ...++...+...+.+.++++.+++.......+.|++..+++++++||++++.++.+..+++.|+.+
T Consensus       215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            333344556777899999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.16  E-value=0.0062  Score=55.85  Aligned_cols=132  Identities=17%  Similarity=0.115  Sum_probs=81.3

Q ss_pred             HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHHHHHHHHH-HHHHHH
Q 020906           58 LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAV-AYLLYM  135 (320)
Q Consensus        58 ~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si-~~~~~~  135 (320)
                      -.+..|...++.+. .|..++.+|+..+.+.+...... ...+....+. .  ...........+...+..++ .+....
T Consensus       160 ~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (302)
T TIGR00817       160 RNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGF-M--QAISGVNVTKIYTVSLVAAMGFFHFYQ  235 (302)
T ss_pred             HHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHH-H--HhhcccCchHHHHHHHHHHHHHHHHHH
Confidence            34556777763334 36778899998887666554321 1000000000 0  00000000000111112222 222223


Q ss_pred             HHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          136 VVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       136 ~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      .+.+.++++++...+.+.-...|+++.++++++++|+++..++++..+++.|+.+...
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            4566899999999999999999999999999999999999999999999999988654

specificities overlap.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.14  E-value=0.0024  Score=50.32  Aligned_cols=70  Identities=10%  Similarity=0.162  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      ....-+++.++.++-..+++++|++..-.. .....+.+.+.+.+++||++++.+++++.++++|+...-.
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            455566778888899999999999977766 5699999999999999999999999999999999987643

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.04  E-value=0.0066  Score=47.78  Aligned_cols=88  Identities=10%  Similarity=0.013  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (320)
Q Consensus       203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~  282 (320)
                      .+|+++++++.++-.++.|--++  +.||...+.-.+.+...++..+...+|.++..    ...++..|..++++|+.+-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHHH
Confidence            58999999999999999887655  67888888888888888888888888987543    2345667889999998887


Q ss_pred             HHHHHHHHHhhccc
Q 020906          283 FLNYSIFLNTTLNS  296 (320)
Q Consensus       283 ~~~~~~~~~i~~~S  296 (320)
                      ...++-|..++.--
T Consensus        79 lswl~Yf~ALk~G~   92 (140)
T COG2510          79 LSWLLYFRALKKGK   92 (140)
T ss_pred             HHHHHHHHHHhcCC
Confidence            77777888887433

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.01  E-value=0.035  Score=52.15  Aligned_cols=64  Identities=19%  Similarity=0.159  Sum_probs=55.9

Q ss_pred             HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      +.+.+...+...+++.++...+.+.-.+.|+++.++++++++|+++..++++..+++.|+.+.+
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            3444444445579999999999999999999999999999999999999999999999998754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.99  E-value=0.024  Score=51.82  Aligned_cols=117  Identities=8%  Similarity=-0.083  Sum_probs=85.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHH
Q 020906          197 SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF  276 (320)
Q Consensus       197 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~  276 (320)
                      +....|+.+.+++.++++...+..|.. .  +++|.++.++...++.+++++.....++..+....  ..++..+.....
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLAV   78 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHHH
Confidence            334589999999999999999999653 3  57999999999999988777765554543321110  112333333344


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          277 SCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       277 s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      .++.....+.+.+..++++++...++....-++.+.+++++.
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~  120 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF  120 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence            444445556677999999999999999999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.97  E-value=0.0046  Score=47.96  Aligned_cols=69  Identities=12%  Similarity=0.204  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHHHh-hHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks-~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      ...-+.+.++.++-..+++.+|++..-...+ ...+.+.+.+++++||+.++.++.++.++++|++..-.
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3444567778888899999999998877754 89999999999999999999999999999999988643

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.93  E-value=0.0059  Score=46.91  Aligned_cols=68  Identities=16%  Similarity=0.172  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      ....-+.+..+.++-..+++.+|++..-..- ....+.+.+.+++++||+.++.+++++.+++.|++..
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3444566778888889999999999655554 5899999999999999999999999999999999874

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.90  E-value=0.029  Score=51.54  Aligned_cols=143  Identities=11%  Similarity=0.112  Sum_probs=97.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHH
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLM  122 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (320)
                      +.....++.++.......+|.++.+++.+ +..+.++..+.+.+........ ...+..+..++-      .+. .+.+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~------~~~-p~~~~  226 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFI------SAH-PSVLL  226 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHH------HHh-HHHHH
Confidence            45556677777777788899999887765 5566666666666655443322 000111000000      001 13445


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (320)
Q Consensus       123 ~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~  194 (320)
                      .++..++.......+-+...+..+.-..++...+--+++++++.+++++++++..|.++.++..|..+....
T Consensus       227 ~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  227 YLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            556666666666666677788888889999999999999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=96.89  E-value=0.028  Score=50.10  Aligned_cols=115  Identities=12%  Similarity=0.003  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh-hcCCCCcchHHHHHHHHHHH
Q 020906          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI  279 (320)
Q Consensus       201 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~-~~~~~~~~~~~~~~l~~s~~  279 (320)
                      .|+.+.++++++++...+..|. ..  +++|.++.++...++.+.++++....++..+. .+.........+..+...++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            5899999999999999999887 33  48999999999999988887765444543221 11111111112344566666


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          280 LAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       280 ~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      +....+.+.+..++++++.+.+++...-++.+.+++++.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~  117 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF  117 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666777888999999999999999999999988753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=96.88  E-value=0.0053  Score=47.76  Aligned_cols=100  Identities=20%  Similarity=0.166  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH-HHHHHHHH
Q 020906          211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA-FFLNYSIF  289 (320)
Q Consensus       211 ~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~-~~~~~~~~  289 (320)
                      +++|.+.++.|+..++  .++.+..++....+.+ +++.....+..+     ....++..+......|+++ ...+...+
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence            3578888999998875  7999999999999887 655554443322     1112233345555556654 55566668


Q ss_pred             HHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906          290 LNTTLNSAVTQTICGSFYHWTRLDTIWWA  318 (320)
Q Consensus       290 ~~i~~~Salt~sv~g~~K~~~~i~~S~~~  318 (320)
                      ...+++++...++...+..+...+++++.
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~  101 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLF  101 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.79  E-value=0.0087  Score=46.29  Aligned_cols=67  Identities=18%  Similarity=0.222  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      ...-+.+..+.++-..+++++|++..-.. -....+.+.+.+.+++||+.++.+++++.+++.|+...
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            44455667788888999999999965544 45889999999999999999999999999999999763

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.72  E-value=0.052  Score=49.60  Aligned_cols=72  Identities=18%  Similarity=0.193  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhc-CcchhHHHHHHhhHHHHHHHHHHHHhccccCcchh----hHHHHHhhhhhhhc
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVR-GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVAG  192 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~-~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~----~sl~li~~Gv~l~~  192 (320)
                      ....+..++++.+...+...+++ +.+++.+.++-...|+...+.+++++||+.+++++    ++.++++.|+.+.+
T Consensus       211 ~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       211 ILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            33445577777777778889999 99999999999999999999999999999999999    99999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.68  E-value=0.0099  Score=45.44  Aligned_cols=68  Identities=15%  Similarity=0.188  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhH-HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~-~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~  192 (320)
                      ...-+.+..+.++-..+++++|++. |.+--....+.+.+.+++++||+.+..+++++.++++|+...-
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            4444566777788889999999996 4555678899999999999999999999999999999998653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.59  E-value=0.14  Score=45.73  Aligned_cols=77  Identities=19%  Similarity=0.293  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906          118 LKTLMHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (320)
Q Consensus       118 ~~~~~~~~~~si~~~-~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~  194 (320)
                      .+.+......+++.. ....+.+.+++..+.+.......+.|++..+.++++++|+++..++.+..+++.|+.+....
T Consensus       211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            445566666666655 57788899999999999999999999999999999999999999999999999999886543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.29  E-value=0.048  Score=50.75  Aligned_cols=60  Identities=18%  Similarity=0.260  Sum_probs=52.4

Q ss_pred             HhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc
Q 020906          137 VSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL  196 (320)
Q Consensus       137 ~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~  196 (320)
                      +....++..+..+..+.-.++.+..++++.+++|+++++..+++.+++++|.++....+.
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            445667888888888888999999999999999999999999999999999999766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.00  E-value=0.032  Score=41.84  Aligned_cols=57  Identities=14%  Similarity=0.186  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHhhhhhcCcchhHH-HHHHhhHHHHHHHHHHHHhccccCcchhhHHHHH
Q 020906          128 AVAYLLYMVVSVESVRGVNVPMY-TTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLI  184 (320)
Q Consensus       128 si~~~~~~~~~~~sl~~~svs~~-~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li  184 (320)
                      -..+..+.++-..+++++|++.. .+......+.+.+.+..++||+.|+.++.++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34678888899999999999976 5556799999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.95  E-value=0.045  Score=50.30  Aligned_cols=68  Identities=18%  Similarity=0.282  Sum_probs=60.4

Q ss_pred             HHHHHH-HHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          124 TLPLAV-AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       124 ~~~~si-~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      .+..|+ .+.++...+..|+.+.|.+..+-+-++..++..+++..++|||.+++.+.++.+++.|..+.
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            344443 45677788899999999999999999999999999999999999999999999999999764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.39  E-value=0.046  Score=42.46  Aligned_cols=70  Identities=11%  Similarity=0.161  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      ++.+.|..+=.+ .....+..+...++|...-+- +++-++|++.++++.+|..++++++++.+++.|+.++
T Consensus        42 ~~y~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            355566554433 444567788999999877764 8999999999999888888999999999999999764

Many members are annotated as potential transmembrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.14  E-value=0.51  Score=42.45  Aligned_cols=66  Identities=18%  Similarity=0.170  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchh----hHHHHHhhhhh
Q 020906          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAF  189 (320)
Q Consensus       124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~----~sl~li~~Gv~  189 (320)
                      -+..++++.....+...|.+.+-++..-.+..+.++...+.+.+++||+-+++++    .+++++++|.+
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            3677889999989999999999999999999999999999999999999887765    34555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=93.77  E-value=0.26  Score=43.54  Aligned_cols=55  Identities=13%  Similarity=0.145  Sum_probs=51.0

Q ss_pred             HHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhh
Q 020906          135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (320)
Q Consensus       135 ~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~  189 (320)
                      ..+.+.+++.+|-+.+.++-++.|.+-.+.+.++++|.++..+|+++..++.+.+
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            3378899999999999999999999999999999999999999999999887765

>PRK13499 rhamnose-proton symporter; Provisional

Probab=93.39  E-value=6.9  Score=36.65  Aligned_cols=102  Identities=13%  Similarity=0.143  Sum_probs=76.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHH-HHhhHHHHHHHHHHHHhcccc---C----cchhhHHHHHhhhh
Q 020906          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTT-LRRTTVAFTMIMEYFLAGQKY---T----PPVVGSVGLIILGA  188 (320)
Q Consensus       117 ~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v-~ks~~p~~~~l~~~~~~~~~~---s----~~~~~sl~li~~Gv  188 (320)
                      +.+.+..-+..++++.+.......+.+++.+|...- .-.++.+...++..++++|-.   +    .....+++++++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            334455556777888888889999999998887654 445777888888888888644   2    23557888899999


Q ss_pred             hhhcc----cCc--------ccc-hHHHHHHHHHHHHHHHHHH
Q 020906          189 FVAGA----RDL--------SFD-FFGYAVVFLANITTAIYLA  218 (320)
Q Consensus       189 ~l~~~----~d~--------~~~-~~G~~~~l~s~~~~a~~~v  218 (320)
                      ++.+.    .|.        +++ ..|+.+++++.+.++.|..
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            99776    332        122 5799999999999999983

>TIGR00803 nst UDP-galactose transporter

Probab=92.42  E-value=1.4  Score=38.21  Aligned_cols=62  Identities=11%  Similarity=0.045  Sum_probs=53.7

Q ss_pred             HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (320)
Q Consensus       129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l  190 (320)
                      +.......+-...+++.+.-+..+.-.+.++++.+++.++++++++...+.+..++..|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34444555667888999888999999999999999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=91.72  E-value=4  Score=36.96  Aligned_cols=113  Identities=13%  Similarity=0.100  Sum_probs=78.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHH
Q 020906          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (320)
Q Consensus       199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~  278 (320)
                      +..|+++++.+.+.++.--.+.|-+.   +.++.|+..+..+++.|+++......+.+.+..+  -..+|..+..+.+++
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHHH
Confidence            34799999999999999888877653   5689999999999999999988777787776654  234565566665555


Q ss_pred             HHHHHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906          279 ILAFFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWW  317 (320)
Q Consensus       279 ~~~~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~  317 (320)
                      .+- ..|+.. -+..+.-..+-.|.==-..+.+.++++++
T Consensus        80 ~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~l  118 (293)
T COG2962          80 LLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRL  118 (293)
T ss_pred             HHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHH
Confidence            442 245554 34455555555555555556666655544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=91.42  E-value=5.5  Score=32.07  Aligned_cols=100  Identities=18%  Similarity=0.118  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (320)
Q Consensus       203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~  282 (320)
                      +.+++.+..+.+++.....++-++.+ ||+.-.+.+...+...+..+....++. +..+..   +.+ |+. .+.|++|.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~---~~p-~w~-~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASLS---SVP-WWA-YLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhc---cCC-hHH-hccHHHHH
Confidence            56778888888999888888876544 699999998888888888776666553 221111   111 222 23888888


Q ss_pred             HHHHHHHHHhhccchhHHHHHhHhhHH
Q 020906          283 FLNYSIFLNTTLNSAVTQTICGSFYHW  309 (320)
Q Consensus       283 ~~~~~~~~~i~~~Salt~sv~g~~K~~  309 (320)
                      ..-.+....+.+.++....+....-++
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl  102 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQL  102 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence            888888888888888777766554443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=89.30  E-value=15  Score=32.59  Aligned_cols=128  Identities=9%  Similarity=-0.004  Sum_probs=80.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-ccc-ccccCCCCCCCCCCCCCcccHH
Q 020906           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKI-INFTMGDSLMTSDSSSTFVPLK  119 (320)
Q Consensus        42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~  119 (320)
                      ..+++.+++..++|....+++++++.+.+  .|..+--.|+-...+....... .+. .+.+  ++        ..+..-
T Consensus       113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~--~~--------g~f~G~  180 (244)
T PF04142_consen  113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAIS--ES--------GFFHGY  180 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccc--cC--------Cchhhc
Confidence            34567788888888888889999998654  4666777776555444443332 211 1111  00        001111


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHH
Q 020906          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG  182 (320)
Q Consensus       120 ~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~  182 (320)
                      ....+. +-+.....-..-..-+||.+-=.-....+...+.+.+++..+++.+++....++..
T Consensus       181 ~~~~~~-~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  181 SWWVWI-VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             chHHHH-HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            112222 22334444444556688887778888889999999999999999999988776654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.15  E-value=1.7  Score=39.85  Aligned_cols=67  Identities=12%  Similarity=0.108  Sum_probs=60.0

Q ss_pred             HHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906          125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (320)
Q Consensus       125 ~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~  191 (320)
                      +-.| +.+.+.-..+..|+.+.|.+..+-+-+++.+...+++..+++||.++.-.+++.+.++|..+.
T Consensus        67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i  134 (335)
T KOG2922|consen   67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI  134 (335)
T ss_pred             HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence            4444 456778888999999999999999999999999999999999999999999999999998764

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=86.08  E-value=3.7  Score=38.54  Aligned_cols=135  Identities=13%  Similarity=0.112  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcC--CCCchHHHHHHHHHHHHHHHH----HHHHcccccccCCCCCCCCCCCCCccc
Q 020906           44 GANAAISYMACAVLLVMFNKAALSSY--NFPCANVITLLQMISSCSFLY----FLRRWKIINFTMGDSLMTSDSSSTFVP  117 (320)
Q Consensus        44 ~~~~~~~~~~~s~~~~~~NK~ll~~~--~f~~p~~L~~~q~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (320)
                      .+++++.|++-.+.+    |+-.++.  +.+-|.++.++..+ +.+++|    ++..++.-+++      +.+  ..++ 
T Consensus       252 aL~sA~~YavY~vll----k~~~~~eg~rvdi~lffGfvGLf-nllllwP~l~iL~~~~~e~F~------lP~--~~q~-  317 (416)
T KOG2765|consen  252 ALLSALLYAVYTVLL----KRKIGDEGERVDIQLFFGFVGLF-NLLLLWPPLIILDFFGEERFE------LPS--STQF-  317 (416)
T ss_pred             HHHHHHHHHHHHHHH----HhhcccccccccHHHHHHHHHHH-HHHHHhHHHHHHHHhccCccc------CCC--Ccee-
Confidence            356666676666555    7666654  46667766666633 444444    23334322221      100  0111 


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc
Q 020906          118 LKTLMHTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL  196 (320)
Q Consensus       118 ~~~~~~~~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~  196 (320)
                          ..++..+ +...++=+++-+|.-..+--..++.-+++++..++.+.++.++++|+..+++-+++.+|.+++...+.
T Consensus       318 ----~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  318 ----SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             ----EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence                1122222 22345666788888888888889999999999999999999999999999999999999998876544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=85.02  E-value=1.2  Score=39.79  Aligned_cols=69  Identities=10%  Similarity=0.006  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (320)
Q Consensus       122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l  190 (320)
                      .-..-+|++..+..++-..+++---.+=..+.+.+..++..+.+.+++++.+++..|.+.+.++...+.
T Consensus       254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~  322 (346)
T KOG4510|consen  254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW  322 (346)
T ss_pred             EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence            345667888788888889999888777778889999999999999999999999999888777655544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=80.76  E-value=5.7  Score=36.76  Aligned_cols=140  Identities=14%  Similarity=0.087  Sum_probs=90.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHH--cccccccCCCCCCCCCCCCCccc
Q 020906           43 RGANAAISYMACAVLLVMFNKAALS--SYNFPCANVITLLQMISSCSFLY-FLRR--WKIINFTMGDSLMTSDSSSTFVP  117 (320)
Q Consensus        43 ~~~~~~~~~~~~s~~~~~~NK~ll~--~~~f~~p~~L~~~q~~~~~l~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~  117 (320)
                      .+...+.++......-.++-|.++.  +++.+ +..+...+.-++.+.+. ....  .+.. +. ...       ....+
T Consensus       163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~-~~~-------~~~~~  232 (316)
T KOG1441|consen  163 FGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNK-FV-GFL-------TAPWF  232 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccc-ee-eee-------ccccc
Confidence            3455566666666666777788885  34554 55666676666666555 2211  1100 00 000       00012


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (320)
Q Consensus       118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~  193 (320)
                      .. ...+...+++....+......+..++.=++++.-...-+++...++++++++.++...++..+.++|+++.+.
T Consensus       233 ~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  233 VT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             hh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            22 2223444455555566778888888888889888888888889999999999999999999999999988654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.02
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.89

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.02  E-value=2.1e-05  Score=60.12  Aligned_cols=71  Identities=10%  Similarity=0.192  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC
Q 020906          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD  195 (320)
Q Consensus       125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d  195 (320)
                      +...+.+.+..++...++++.|++..-.+ ..+.|+++.+.+++++||++++.+++++.++++|+.+....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33344677888888999999999999887 899999999999999999999999999999999998875543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.89  E-value=2.1e-05  Score=62.49  Aligned_cols=69  Identities=10%  Similarity=0.186  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906          126 PLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (320)
Q Consensus       126 ~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~  194 (320)
                      ...+.+.+..++.+.++++.|++....+ ..+.|++++++++++++|++++.+++++.++++|+.+....
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344677888899999999999977777 99999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00