Citrus Sinensis ID: 020908

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MSSPLYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAGMHL
Secondary Structure (PSIPRED)
cccHHHHHHcccccccccccccccEEEcccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccHHcccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccEEccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mssplyaafclpsspylskfsryrvtccsgsqqkYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAaeddslishssvplpvdalisqlddlsvgycshyssgfrsspeSVLESIERYLFdkkgfrrtnarnqlieprsLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGlidfdveisfpldlyslprgyqkqkskdsdqphIITVQMLLEEILRNLKNafwpfqhdrsRSLFLRAARAANCidqlnsgdsgLQLASAKAARHRLErgvwnsvrfGDMRCALAGMHL
Flexible Loop (DISEMBL)
mssplyaaFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIkrlsnveretsiSINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYssgfrsspesvLESIERYLFdkkgfrrtnarnqlieprsLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQkqkskdsdqphIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSGDSGLQLASAKAARhrlergvwnsvrfGDMRCALAGMHL
Low Complexity Region (SEG)
MSSPLYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDrsrslflraaraaNCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAGMHL
Disordered region (IsUnstruct)
****LYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFR****SVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRG************HIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSG**GLQLASAKAARHRLERGVWNSVRFGDMRCALA****
Disordered Region (DISOPRED)
***PL***FCLPSSPYLSKFSRYRV***************KLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERE**ISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSS*FRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQ**S***GL*LASAKAARHRLERGVWNSVRFGDMRCALAGMHL
Disordered Region (DISEMBL)
MSSPLYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYS*********VLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPR***********QPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSGDSGLQ**********LERGVWNSVRFGDMRCALAGMHL
Disordered Region (DISPRO)
**SPLYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSGDSGLQ**********LERGVWNSVRFGDMRCALAGMHL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSPLYAAFCLPSSPYLSKFSRYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAGMHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
359494997	423	PREDICTED: uncharacterized protein LOC10	0.9	0.680	0.711	1e-116
296090330	423	unnamed protein product [Vitis vinifera]	0.9	0.680	0.711	1e-115
357456475	422	hypothetical protein MTR_3g014680 [Medic	0.953	0.722	0.628	1e-112
356510483	485	PREDICTED: uncharacterized protein LOC10	0.940	0.620	0.646	1e-109
255641242	422	unknown [Glycine max]	0.940	0.713	0.626	1e-105
255543955	470	conserved hypothetical protein [Ricinus	0.868	0.591	0.667	1e-98
224057294	426	predicted protein [Populus trichocarpa]	0.85	0.638	0.623	9e-95
224072891	423	predicted protein [Populus trichocarpa]	0.906	0.685	0.565	1e-86
449445168	239	PREDICTED: uncharacterized protein LOC10	0.681	0.912	0.716	4e-85
118481905	299	unknown [Populus trichocarpa]	0.796	0.852	0.579	4e-78

>gi|359494997|ref|XP_002265457.2| PREDICTED: uncharacterized protein LOC100249731 [Vitis vinifera]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/295 (71%), Positives = 244/295 (82%), Gaps = 7/295 (2%)

Query: 24  RVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISI 83
           RV C    + +Y + DLK  LH  LD++GTD   A+ AR+GF S+IKRLS++ERETSISI
Sbjct: 39  RVVC----RAQYASEDLKFVLHHALDALGTDIAHAKVARDGFCSEIKRLSDIERETSISI 94

Query: 84  NKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVL 143
           N+ VDLGKTAL+IAAEDDSLISHSSVPLPVDA I +LDDLS+ YCSHYSS FR+SPE   
Sbjct: 95  NRGVDLGKTALYIAAEDDSLISHSSVPLPVDAFIERLDDLSMDYCSHYSSAFRASPEIFF 154

Query: 144 ESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGL 203
           E++ERYL+  KGFRRTNA   L E R+LYLHSVLTHR+GSA MLSLIYSEILKMLR+WGL
Sbjct: 155 ETLERYLYINKGFRRTNA--NLSESRALYLHSVLTHRSGSAAMLSLIYSEILKMLRLWGL 212

Query: 204 IDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSR 263
           +DFDVEI FP D +SLPRGY KQKSK+SDQPHI+T Q L  E+LR+LK+AFWPFQHD +R
Sbjct: 213 LDFDVEIFFPHDSHSLPRGYHKQKSKESDQPHIMTSQSLFVEMLRSLKDAFWPFQHDNTR 272

Query: 264 SLFLRAARAANCIDQLN-SGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAG 317
           SLFLRAA AANCID+ N   +SG +LASAKAA+HRLERGVW SVRFGDMR AL+ 
Sbjct: 273 SLFLRAAHAANCIDRSNIVTESGFELASAKAAQHRLERGVWTSVRFGDMRRALSA 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090330|emb|CBI40149.3| unnamed protein product [Vitis vinifera]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/295 (71%), Positives = 244/295 (82%), Gaps = 7/295 (2%)

Query: 24  RVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISI 83
           RV C    + +Y + DLK  LH  LD++GTD   A+ AR+GF S+IKRLS++ERETSISI
Sbjct: 42  RVVC----RAQYASEDLKFVLHHALDALGTDIAHAKVARDGFCSEIKRLSDIERETSISI 97

Query: 84  NKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVL 143
           N+ VDLGKTAL+IAAEDDSLISHSSVPLPVDA I +LDDLS+ YCSHYSS FR+SPE   
Sbjct: 98  NRGVDLGKTALYIAAEDDSLISHSSVPLPVDAFIERLDDLSMDYCSHYSSAFRASPEIFF 157

Query: 144 ESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGL 203
           E++ERYL+  KGFRRTNA   L E R+LYLHSVLTHR+GSA MLSLIYSEILKMLR+WGL
Sbjct: 158 ETLERYLYINKGFRRTNA--NLSESRALYLHSVLTHRSGSAAMLSLIYSEILKMLRLWGL 215

Query: 204 IDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSR 263
           +DFDVEI FP D +SLPRGY KQKSK+SDQPHI+T Q L  E+LR+LK+AFWPFQHD +R
Sbjct: 216 LDFDVEIFFPHDSHSLPRGYHKQKSKESDQPHIMTSQSLFVEMLRSLKDAFWPFQHDNTR 275

Query: 264 SLFLRAARAANCIDQLN-SGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAG 317
           SLFLRAA AANCID+ N   +SG +LASAKAA+HRLERGVW SVRFGDMR AL+ 
Sbjct: 276 SLFLRAAHAANCIDRSNIVTESGFELASAKAAQHRLERGVWTSVRFGDMRRALSA 330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456475|ref|XP_003598518.1| hypothetical protein MTR_3g014680 [Medicago truncatula] gi|355487566|gb|AES68769.1| hypothetical protein MTR_3g014680 [Medicago truncatula]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/320 (62%), Positives = 253/320 (79%), Gaps = 15/320 (4%)

Query: 11  LPSSPYLSKFSRY------------RVTCCSGSQQKYVASDLKLALHDVLDSIGTDTTFA 58
           LP++ + S FS++            RV C  GS  ++VA+DLK  LHD LD+ G DT  A
Sbjct: 9   LPTTSFFSTFSKFQFCPPSFSSSCPRVICHGGSNVQHVATDLKFFLHDALDASGIDTAHA 68

Query: 59  REAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALIS 118
           REAREGF SQIKRL+++E+ETSI IN+ VDLG+TAL+IAAEDDSL+SHSSVPLPVDA ++
Sbjct: 69  REAREGFCSQIKRLTDIEKETSICINRHVDLGRTALYIAAEDDSLVSHSSVPLPVDAFVA 128

Query: 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLT 178
           +LDDLS+ YC HY+  + SSPE  LESIER+L+  KGFRRT+A   L+EP++LYLHSVLT
Sbjct: 129 RLDDLSMDYCPHYTPSYDSSPEKFLESIERFLYVHKGFRRTSA--NLLEPQALYLHSVLT 186

Query: 179 HRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIIT 238
           HR+GS  MLSLIYSEILKMLR+WGL+ FD EI +P D++++P+GY K KSK+SDQ HI+T
Sbjct: 187 HRSGSPAMLSLIYSEILKMLRLWGLLYFDAEIFYPHDIFNVPKGYHKLKSKESDQAHIMT 246

Query: 239 VQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN-SGDSGLQLASAKAARHR 297
              LL EIL NLK+AFWPF HD S++LFLRAA AANC+D+ +  G+SG Q+ASAKAARHR
Sbjct: 247 SGNLLVEILNNLKHAFWPFHHDHSKTLFLRAAHAANCVDRSDFVGESGSQIASAKAARHR 306

Query: 298 LERGVWNSVRFGDMRCALAG 317
           L+RGVW +VRFGDMR +L+ 
Sbjct: 307 LDRGVWTTVRFGDMRRSLSA 326

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510483|ref|XP_003523967.1| PREDICTED: uncharacterized protein LOC100807902 [Glycine max]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/308 (64%), Positives = 243/308 (78%), Gaps = 7/308 (2%)

Query: 15  PYLSKFSRYRVTCC----SGSQQKYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIK 70
           P+L+  S  RV  C    + + Q++VA+DLK  LHD L + G DTT AREARE F SQI 
Sbjct: 85  PFLASSSSSRVVACHVGSNSNAQQHVATDLKFVLHDALHAYGIDTTHAREAREQFCSQIG 144

Query: 71  RLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSH 130
           R +++E+ETSI IN+CVDLG+TAL+IAAEDDSL+SHSSVPLPVD  I++LDDLS+ YC H
Sbjct: 145 RFTDIEKETSICINRCVDLGRTALYIAAEDDSLVSHSSVPLPVDDFITRLDDLSMDYCPH 204

Query: 131 YSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLI 190
           YS  + SSPE  LESIER+L+  KGFRR NA    +EPR+LYLHSVLTHR+GSA MLSLI
Sbjct: 205 YSPEYDSSPEKFLESIERFLYIHKGFRRANA--NALEPRALYLHSVLTHRSGSAAMLSLI 262

Query: 191 YSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNL 250
           YSEILKMLR+W L+ FD EI FP D  +LP GY KQKSK+SDQ HI+T   LL EIL +L
Sbjct: 263 YSEILKMLRLWSLLYFDAEIFFPHDALTLPTGYHKQKSKESDQAHIMTSGNLLVEILSDL 322

Query: 251 KNAFWPFQHDRSRSLFLRAARAANCIDQLN-SGDSGLQLASAKAARHRLERGVWNSVRFG 309
           K+AFWPFQHD +++LFLRAA AANC+D+ +  G+SG Q+ASAKAA+HRL+RGVW SVRFG
Sbjct: 323 KHAFWPFQHDHTKTLFLRAATAANCVDRSDFVGESGSQIASAKAAQHRLDRGVWTSVRFG 382

Query: 310 DMRCALAG 317
           DMR +L+ 
Sbjct: 383 DMRRSLSA 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641242|gb|ACU20898.1| unknown [Glycine max]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/313 (62%), Positives = 240/313 (76%), Gaps = 12/313 (3%)

Query: 9   FCLPSSPYLSKFSRYRVTCCSGSQ---QKYVASDLKLALHDVLDSIGTDTTFAREAREGF 65
           FC P  P+ S+     V C  GS    QK+VA+DLK  LHD L   G +TT AREARE F
Sbjct: 23  FCPP--PFPSRV----VACHVGSNSNVQKHVATDLKFVLHDALHDSGINTTHAREAREHF 76

Query: 66  YSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSV 125
            SQI+R +++E+ TSI IN+CVDLG+TAL+IAAEDDSL+SHSSVPLPVD  I++LDDLS+
Sbjct: 77  CSQIRRFTDIEKGTSICINRCVDLGRTALYIAAEDDSLVSHSSVPLPVDDFITRLDDLSM 136

Query: 126 GYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAV 185
            YC HYS  + SSPE  LESIER+L+  KGFRR NA   ++EPR+LYLHSVLTHR+GSA 
Sbjct: 137 DYCPHYSPKYDSSPEKFLESIERFLYIHKGFRRANA--NVLEPRALYLHSVLTHRSGSAA 194

Query: 186 MLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEE 245
           MLSLIYSE+LKM R+W L+ FD EI F  D  +LP GY KQKSK+SDQ HI+T   LL E
Sbjct: 195 MLSLIYSEVLKMPRLWSLLHFDAEIFFSRDALTLPTGYHKQKSKESDQAHIMTSGNLLVE 254

Query: 246 ILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN-SGDSGLQLASAKAARHRLERGVWN 304
           IL +LK+AFWPFQHD +++LFLRAA AANC+D+ +  G+SG Q+A AKAA+HRL+RGVW 
Sbjct: 255 ILNDLKHAFWPFQHDHTKTLFLRAATAANCVDRSDFVGESGSQIALAKAAQHRLDRGVWT 314

Query: 305 SVRFGDMRCALAG 317
           S RFGDMR +L+ 
Sbjct: 315 SARFGDMRRSLSA 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543955|ref|XP_002513040.1| conserved hypothetical protein [Ricinus communis] gi|223548051|gb|EEF49543.1| conserved hypothetical protein [Ricinus communis]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/280 (66%), Positives = 225/280 (80%), Gaps = 2/280 (0%)

Query: 38  SDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIA 97
           +DLK  L D LDS G +T  AR++R+ F SQI++L+ +ER TSISIN+ VDL KTAL+IA
Sbjct: 66  NDLKFVLLDALDSSGINTAHARDSRKEFLSQIEKLTVIERGTSISINRRVDLAKTALYIA 125

Query: 98  AEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFR 157
           AEDDSLISHSSVPLPVD+ + +L DLS+G+CS YSS   SSP+  L+S+E YL+ KKGFR
Sbjct: 126 AEDDSLISHSSVPLPVDSFVDRLYDLSMGFCSAYSSSLLSSPDKFLDSLEDYLYVKKGFR 185

Query: 158 RTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLY 217
           R N   QL +PR+LYLHSVLTHRTGSA MLS+IYSEILK+LR+W L+DF+ EISFP D +
Sbjct: 186 RNNGGRQL-DPRALYLHSVLTHRTGSAAMLSVIYSEILKLLRMWSLLDFNCEISFPHDCH 244

Query: 218 SLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCID 277
            LP+GY KQKS +SDQ HI+T Q LLEEILRNLK  FWPFQ D S+S FLRAA AANCID
Sbjct: 245 GLPKGYHKQKSVESDQLHIMTTQTLLEEILRNLKETFWPFQQDYSKSSFLRAADAANCID 304

Query: 278 QLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAG 317
           + ++  SG QLASAKAA+HRL+RGVW SV FGDMR AL+ 
Sbjct: 305 R-STEQSGYQLASAKAAQHRLDRGVWTSVLFGDMRRALSA 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057294|ref|XP_002299205.1| predicted protein [Populus trichocarpa] gi|222846463|gb|EEE84010.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 184/295 (62%), Positives = 222/295 (75%), Gaps = 23/295 (7%)

Query: 24  RVTCCSGSQQKY-VASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSIS 82
           RV C  GSQ    V +D + ALHD LDS G +TT AREAR+ F SQIKRLS++ERE SIS
Sbjct: 34  RVVCRGGSQPPPPVTTDFQFALHDALDSSGINTTHAREARQNFMSQIKRLSSIEREISIS 93

Query: 83  INKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESV 142
           IN+ VDL KTAL+IAAEDDSLISHSSV LPVDA I +LDDLS+G+C++ SS  +SSPE +
Sbjct: 94  INRRVDLAKTALYIAAEDDSLISHSSVALPVDAFIERLDDLSMGFCTNNSSALKSSPEML 153

Query: 143 LESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIWG 202
           L+S+E++L+ KK                     VLTHR+GSAVML+LIYSEILK LR+W 
Sbjct: 154 LDSLEKFLYVKK---------------------VLTHRSGSAVMLALIYSEILKTLRLWS 192

Query: 203 LIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDRS 262
           L+DFD EI FP D + LPRGY KQKSK+SD  HI+T   LLE+ILRNLK AFWPFQHD +
Sbjct: 193 LLDFDCEIFFPHDNHGLPRGYHKQKSKESDHQHILTSLTLLEKILRNLKEAFWPFQHDHT 252

Query: 263 RSLFLRAARAANCIDQLNSGD-SGLQLASAKAARHRLERGVWNSVRFGDMRCALA 316
           +SLFL+AA AA+C+D   + + SG QLASAKAA+HRL+RGVW SV FGDMR AL+
Sbjct: 253 KSLFLQAAHAADCVDISKTFEGSGAQLASAKAAQHRLDRGVWTSVHFGDMRRALS 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072891|ref|XP_002303930.1| predicted protein [Populus trichocarpa] gi|222841362|gb|EEE78909.1| predicted protein [Populus trichocarpa]

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/299 (56%), Positives = 219/299 (73%), Gaps = 9/299 (3%)

Query: 24  RVTCCSGSQQ--KYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSI 81
           RV C  G  +    V  D K ALHD LDS G DTT AREAR+ F SQIK LS +ERE SI
Sbjct: 35  RVVCRGGGSELPPPVTPDFKFALHDALDSSGVDTTHAREARQNFMSQIKGLSRIEREVSI 94

Query: 82  SINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSG--FRSSP 139
           SIN+ VDL KTA++I+AED +L+S SS+ LPVD  I +L DL++ +C    SG   R+SP
Sbjct: 95  SINRRVDLAKTAIYISAEDFALMSQSSLALPVDPFIERLFDLTMEFCR---SGKVLRASP 151

Query: 140 ESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLR 199
           E++L+S+ ++L+ +K F+R+N  ++L EP  LYLH+VLT+++GSA ML+LIYSEILK+LR
Sbjct: 152 EALLDSLYKFLYVEKDFQRSNVISRL-EPHPLYLHAVLTYQSGSAYMLALIYSEILKVLR 210

Query: 200 IWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQH 259
            W L+DFD EI FP D Y LPRGY KQKS +SD PHI+TVQ LLEEIL+N+K AFWPF+H
Sbjct: 211 FWSLLDFDCEIFFPHDRYGLPRGYHKQKSAESDHPHILTVQTLLEEILKNVKEAFWPFRH 270

Query: 260 DRSRSLFLRAARAANCIDQLN-SGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAG 317
           D+++SLFLRA  A  C D+ N   +SG QL SAK++  RL+RG   S+  GD+R AL+ 
Sbjct: 271 DQTKSLFLRAVHAVLCTDRSNVVEESGFQLESAKSSHRRLDRGTLTSLHLGDLRLALSA 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445168|ref|XP_004140345.1| PREDICTED: uncharacterized protein LOC101204123 [Cucumis sativus]

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 157/219 (71%), Positives = 181/219 (82%), Gaps = 1/219 (0%)

Query: 59  REAREGFYSQIKRLSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALIS 118
           +EAR+GF SQI  LS +ER+TSISIN+ VDL K AL+IAAEDDSL+SHSSVPLPVDA I 
Sbjct: 2   QEARKGFLSQIHYLSKIERDTSISINRRVDLAKAALYIAAEDDSLVSHSSVPLPVDAFIH 61

Query: 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLT 178
           +L DLS+GYC+HY S F SSPE  LESIERY++  KGFRRT ++ Q  EPR+LYLH+VLT
Sbjct: 62  RLSDLSMGYCTHYKSSFNSSPEIFLESIERYMYVMKGFRRTGSKAQ-SEPRALYLHTVLT 120

Query: 179 HRTGSAVMLSLIYSEILKMLRIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIIT 238
           HRTGSA +LSLIYSEILKMLR+W L+DFDVEI  P D YSLP GY K KSK+SDQPHI+T
Sbjct: 121 HRTGSAALLSLIYSEILKMLRLWSLLDFDVEIYHPHDDYSLPMGYHKLKSKESDQPHIMT 180

Query: 239 VQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCID 277
            Q LL EIL NLK +FWPFQ ++SRSLFLRAA AANC D
Sbjct: 181 TQTLLVEILTNLKESFWPFQQNQSRSLFLRAADAANCSD 219

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481905|gb|ABK92887.1| unknown [Populus trichocarpa]

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/259 (57%), Positives = 193/259 (74%), Gaps = 4/259 (1%)

Query: 24  RVTCCSGSQQ--KYVASDLKLALHDVLDSIGTDTTFAREAREGFYSQIKRLSNVERETSI 81
           RV C  G  +    V  D K ALHD LDS G DTT AREAR+ F SQIK LS +ERE SI
Sbjct: 35  RVVCRGGGSELPPPVTPDFKFALHDALDSSGVDTTHAREARQNFMSQIKGLSRIEREVSI 94

Query: 82  SINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPES 141
           SIN+ VDL KTA++I+AED +L+S SS+ LPVD  I +L DL++ +C       R+SPE+
Sbjct: 95  SINRRVDLAKTAIYISAEDFALMSQSSLALPVDPFIERLFDLTMEFCRS-GKVLRASPEA 153

Query: 142 VLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW 201
           +L+S+ ++L+ +K F+R+N  ++L EP  LYLH+VLT+++GSA ML+LIYSEILK+LR W
Sbjct: 154 LLDSLYKFLYVEKDFQRSNVISRL-EPHPLYLHAVLTYQSGSAYMLALIYSEILKVLRFW 212

Query: 202 GLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILRNLKNAFWPFQHDR 261
            L+DFD EI FP D Y LPRGY KQKS +SD PHI+TVQ LLEEIL+N+K AFWPF+HD+
Sbjct: 213 SLLDFDCEIFFPHDRYGLPRGYHKQKSAESDHPHILTVQTLLEEILKNVKEAFWPFRHDQ 272

Query: 262 SRSLFLRAARAANCIDQLN 280
           ++SLFLRA  A  C D+ N
Sbjct: 273 TKSLFLRAVHAVLCTDRSN 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
TAIR|locus:2134791	453	AT4G19160 [Arabidopsis thalian	0.175	0.123	0.423	1.8e-05

TAIR|locus:2134791 AT4G19160 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query:   142 VLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRI 200
             VLE++   LFD +GF+RT+     ++P + YLHSVL  R  +A ++S+IY E+ K L +
Sbjct:   200 VLEAVNTVLFDLRGFKRTSIT---LDPENSYLHSVLNCRCSTAFLISVIYIEVCKRLNV 255

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030921001 SubName- Full=Chromosome undetermined scaffold_53, whole genome shotgun sequence; (423 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
pfam13369	154	pfam13369, Transglut_core2, Transglutaminase-like	4e-07
COG2912	269	COG2912, COG2912, Uncharacterized conserved protei	7e-05

>gnl|CDD|222080 pfam13369, Transglut_core2, Transglutaminase-like superfamily

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 136 RSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEIL 195
            + P   LE++ R L+ + GF          +P + YL  VL  R G  + L+++Y E+ 
Sbjct: 21  EADPLEKLEALNRLLYGELGFSG--NSEDYYDPDNSYLDKVLERRRGIPISLAILYLELA 78

Query: 196 KMLRIWGLIDFDVE-ISFP 213
           + L         +E ++FP
Sbjct: 79  RRL------GLPLEGVNFP 91

Length = 154

>gnl|CDD|225464 COG2912, COG2912, Uncharacterized conserved protein [Function unknown]

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 24/141 (17%)

Query: 136 RSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEIL 195
               E  LE++ R  +   GF  +       +PR+LYL+ VL  R G  V L+++  EI 
Sbjct: 53  LLPQEEQLEALLRLFYGDWGF--SGDEEDYFDPRNLYLNQVLQRRQGIPVSLAVVLLEIA 110

Query: 196 KML---------------------RIWGLIDFDVEISFPLDLYSLPRGYQKQKSKDSDQP 234
           + L                         +  F+       +L    +G     ++   + 
Sbjct: 111 RRLDLPLYGVNFPTQLLLRAEVEDEPLLIDPFNGGTLSQHELQEWLKGTIGPSAELLPED 170

Query: 235 -HIITVQMLLEEILRNLKNAF 254
               + + +L  +LRNLK A 
Sbjct: 171 LKQASNREILSRLLRNLKAAL 191

Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
PRK10941	269	hypothetical protein; Provisional	100.0
COG2912	269	Uncharacterized conserved protein [Function unknow	100.0
PF13369	152	Transglut_core2: Transglutaminase-like superfamily	99.93
PF01841	113	Transglut_core: Transglutaminase-like superfamily;	91.3
PF13371	73	TPR_9: Tetratricopeptide repeat	90.03

>PRK10941 hypothetical protein; Provisional

Probab=100.00  E-value=9e-45  Score=342.12  Aligned_cols=212  Identities=18%  Similarity=0.104  Sum_probs=191.7

Q ss_pred             cCCCCcHHHHHHHHhhhhCCCCCCCCCCCCHHHHHHHHHHHHHHHhchhCCCCCCCHHHHHHHHHHHhhhhcCCCCCCCC
Q 020908           83 INKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNAR  162 (320)
Q Consensus        83 ~d~~~dL~eaAL~IA~e~~P~~s~s~v~l~v~~~~~~LD~La~ev~~~~~~~~~~~p~~~l~~Ln~vLf~elGF~Gn~~~  162 (320)
                      ++++++|.+||++||++.+|       ++|++++..+||+|+.+++.  .++...++.+++++||++||++|||+||+. 
T Consensus         8 ~~~~~~L~e~al~ia~~~~p-------dl~~~~~~~~L~~l~~~~~~--~l~~~~~~~~~l~~L~~~fy~~lgF~Gn~~-   77 (269)
T PRK10941          8 EFNKAPLCEGMILASQAIRR-------DFPSQDVYDELERLVSLARE--EISQLLPQDEQLEKLIALFYGEWGFGGASG-   77 (269)
T ss_pred             cccCccHHHHHHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHH--hccccCCHHHHHHHHHHHHHHHhCCCCCcc-
Confidence            47899999999999999999       99999999999999999999  678888999999999999999999999999 


Q ss_pred             CCcCCCccccHHHHHhcCcCchHHHHHHHHHHHHHcCCC--cc--C-----------------C-CCceeeccccccccc
Q 020908          163 NQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW--GL--I-----------------D-FDVEISFPLDLYSLP  220 (320)
Q Consensus       163 ~~Y~dp~Ns~L~~VLerR~GiPIsLsIIYleVArRLGlp--GV--~-----------------d-f~G~il~~~d~~~l~  220 (320)
                       +||+|+|||||+||++|+|+|||||+||++||+|+|+|  ||  |                 | |+|+++++++|+.|.
T Consensus        78 -~Y~~p~ns~L~~VL~~R~G~PisL~il~l~iA~~lglp~~gV~fPghfllr~~~~d~~~~~IDPf~G~~L~~~~l~~~L  156 (269)
T PRK10941         78 -VYRLSDALWLDKVLKTRQGSAVSLGAILLWIANRLDLPLMPVIFPTQLILRADWLDGEMWLINPFNGETLDEHTLEVWL  156 (269)
T ss_pred             -ccCCchhhHHHHHHHccCCCcHHHHHHHHHHHHHcCCCeeeeecCchheeeeecCCCceEEEeCCCCCCCCHHHHHHHH
Confidence             99999999999999999999999999999999999999  87  2                 1 368999999999998


Q ss_pred             cccccCCCCC-CCCCCCCCHHHHHHHHHHHHHHHhcccCCCchhhhHhhhhh---------HHhhhhccCCchhhHhhhh
Q 020908          221 RGYQKQKSKD-SDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAAR---------AANCIDQLNSGDSGLQLAS  290 (320)
Q Consensus       221 rg~~~~~~~~-~~~l~~~s~r~IL~RmL~NLk~~y~~~~~~~s~~l~L~~~~---------~a~~~dr~~~~~~~~~~~~  290 (320)
                      ++..++..+. +.++.+++|++||.||++|||.+|+++++   .+.+|++++         ....+||+.   .++||+|
T Consensus       157 ~~~~g~~~~l~~~~L~~a~~~~il~Rml~nLK~~~~~~~~---~~~AL~~~e~ll~l~P~dp~e~RDRGl---l~~qL~c  230 (269)
T PRK10941        157 KGNISPSAELFNEDLDEADNIEVIRKLLDTLKAALMEEKQ---MELALRASEALLQFDPEDPYEIRDRGL---IYAQLDC  230 (269)
T ss_pred             HhhcCCcccCCHHHcCCCCHHHHHHHHHHHHHHHHHHcCc---HHHHHHHHHHHHHhCCCCHHHHHHHHH---HHHHcCC
Confidence            8777665433 34789999999999999999999999999   555555554         556889988   9999999


Q ss_pred             HHHHHHHHHhhhhccCCcchh
Q 020908          291 AKAARHRLERGVWNSVRFGDM  311 (320)
Q Consensus       291 ~~~a~~~l~~~~~~~~~~g~~  311 (320)
                      .+.|..|||.+|..||+..|.
T Consensus       231 ~~~A~~DL~~fl~~~P~dp~a  251 (269)
T PRK10941        231 EHVALSDLSYFVEQCPEDPIS  251 (269)
T ss_pred             cHHHHHHHHHHHHhCCCchhH
Confidence            999999999999999998875

>COG2912 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.7e-34  Score=267.66  Aligned_cols=212  Identities=23%  Similarity=0.185  Sum_probs=185.8

Q ss_pred             CCcHHHHHHHHhhhhCCCCCCCCCCCCHHHHHHHHHHHHHHHhchhCCCCCCCHHHHHHHHHHHhhhhcCCCCCCCCCCc
Q 020908           86 CVDLGKTALHIAAEDDSLISHSSVPLPVDALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQL  165 (320)
Q Consensus        86 ~~dL~eaAL~IA~e~~P~~s~s~v~l~v~~~~~~LD~La~ev~~~~~~~~~~~p~~~l~~Ln~vLf~elGF~Gn~~~~~Y  165 (320)
                      ...+.++++++++..+|       ++|++.+..+++.++..++.  .++....+++++++++++||++|||+||.+  .|
T Consensus        12 ~~~~~e~~l~~a~~~~~-------~~dp~~~~~~l~~lV~~a~~--~i~~~~~~~~~~~~l~~~fy~d~gF~~~~~--~y   80 (269)
T COG2912          12 EAPLKEGALLAAQAIRP-------DLDPARLLNELDRLVRLARK--RISELLPQEEQLEALLRLFYGDWGFSGDEE--DY   80 (269)
T ss_pred             hccchhHHHHHHHHhCc-------CCCHHHHHHHHHHHHHHHHH--HhhhccChhhHHHHHHHHHHHHcCCCCCcc--cc
Confidence            45567779999999999       99999999999999999988  677778889999999999999999999999  99


Q ss_pred             CCCccccHHHHHhcCcCchHHHHHHHHHHHHHcCCC--cc--CC-----------------CCceeeccccccccccccc
Q 020908          166 IEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW--GL--ID-----------------FDVEISFPLDLYSLPRGYQ  224 (320)
Q Consensus       166 ~dp~Ns~L~~VLerR~GiPIsLsIIYleVArRLGlp--GV--~d-----------------f~G~il~~~d~~~l~rg~~  224 (320)
                      |+|+|+|+++|+++|+|+|||||+||+++|+++|+|  ||  |+                 |+|++++.++|+.+..+..
T Consensus        81 ~~~~n~~l~~Vl~~R~G~pvsLa~vll~ia~~l~lpl~gV~FP~~flLR~~~~~~~~~idP~ng~~l~~~~l~~~l~~~~  160 (269)
T COG2912          81 FDPRNLYLNQVLQRRQGIPVSLAVVLLEIARRLDLPLYGVNFPTQLLLRAEVEDEPLLIDPFNGGTLSQHELQEWLKGTI  160 (269)
T ss_pred             cCchhhhHHHHHHHcCCCcchHHHHHHHHHHHcCCCCCccCCccceeEeeccCCCceeeCCCCCCcccHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999  87  21                 3577888999999988877


Q ss_pred             cCCCCCC-CCCCCCCHHHHHHHHHHHHHHHhcccCCCch------hhhHhhhhhHHhhhhccCCchhhHhhhhHHHHHHH
Q 020908          225 KQKSKDS-DQPHIITVQMLLEEILRNLKNAFWPFQHDRS------RSLFLRAARAANCIDQLNSGDSGLQLASAKAARHR  297 (320)
Q Consensus       225 ~~~~~~~-~~l~~~s~r~IL~RmL~NLk~~y~~~~~~~s------~~l~L~~~~~a~~~dr~~~~~~~~~~~~~~~a~~~  297 (320)
                      ++.++.- ..+..+++++|+.||++|||++|.+++++..      +.+-|.|.++....||+.   .|+||+|.+.|..|
T Consensus       161 ~~~ael~~~~L~~a~~~~il~rll~~lk~~~~~e~~~~~al~~~~r~l~l~P~dp~eirDrGl---iY~ql~c~~vAl~d  237 (269)
T COG2912         161 GPSAELLPEDLKQASNREILSRLLRNLKAALLRELQWELALRVAERLLDLNPEDPYEIRDRGL---IYAQLGCYHVALED  237 (269)
T ss_pred             CcHhhhhhhhhhhccHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhCCCChhhccCcHH---HHHhcCCchhhHHH
Confidence            7754443 3567899999999999999999999999443      344444555666788888   99999999999999


Q ss_pred             HHhhhhccCCcchh
Q 020908          298 LERGVWNSVRFGDM  311 (320)
Q Consensus       298 l~~~~~~~~~~g~~  311 (320)
                      |++++..+|+.++-
T Consensus       238 l~~~~~~~P~~~~a  251 (269)
T COG2912         238 LSYFVEHCPDDPIA  251 (269)
T ss_pred             HHHHHHhCCCchHH
Confidence            99999999998864

>PF13369 Transglut_core2: Transglutaminase-like superfamily

Probab=99.93  E-value=3.5e-26  Score=198.50  Aligned_cols=131  Identities=23%  Similarity=0.364  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHhchhCCCCCCCHHHHHHHHHHHhhhhcCCCCCCCCCCcCCCccccHHHHHhcCcCchHHHHHHHHH
Q 020908          114 DALISQLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSE  193 (320)
Q Consensus       114 ~~~~~~LD~La~ev~~~~~~~~~~~p~~~l~~Ln~vLf~elGF~Gn~~~~~Y~dp~Ns~L~~VLerR~GiPIsLsIIYle  193 (320)
                      +++.++||+|+.++++  .++...+|.+++++|+++||+++||+|+..  +|++|+|++|++||++|+|+||+||+||++
T Consensus         1 ~~~~~~Ld~la~~v~~--~~~~~~~~~~~l~al~~~l~~~~gF~~~~~--~y~~~~n~~l~~vL~~r~G~Pi~L~ily~~   76 (152)
T PF13369_consen    1 EAVLQRLDALAAQVRQ--RLPARASPREKLEALNDVLYQELGFSGNSE--NYYDPENSFLHKVLERRRGIPISLAILYLE   76 (152)
T ss_pred             ChHHHHHHHHHHHHHH--HccccCCHHHHHHHHHHHHHHHcCCCCCcc--ccCChHhhhHHHHHhcCCCCcHHHHHHHHH
Confidence            3678999999999999  577778999999999999999999999999  999999999999999999999999999999


Q ss_pred             HHHHcCCC--cc--C--------C--------C-CceeeccccccccccccccCCCCCCCCCCCCCHHHHHHHHHH
Q 020908          194 ILKMLRIW--GL--I--------D--------F-DVEISFPLDLYSLPRGYQKQKSKDSDQPHIITVQMLLEEILR  248 (320)
Q Consensus       194 VArRLGlp--GV--~--------d--------f-~G~il~~~d~~~l~rg~~~~~~~~~~~l~~~s~r~IL~RmL~  248 (320)
                      ||+|+|++  ||  |        +        | +|++++.++|+.+..+..++......++.++++++||.||+|
T Consensus        77 va~rlGl~~~~v~~Pgh~l~r~~~~~~~~iDpf~~G~~l~~~~l~~~l~~~~~~~~~~~~~l~p~s~~eil~R~l~  152 (152)
T PF13369_consen   77 VARRLGLPAEPVNFPGHFLVRVRSDGEFYIDPFNGGRLLSREELERLLSRMGGPAELDPEYLKPASPREILLRMLR  152 (152)
T ss_pred             HHHHcCCeEEEEecCCEEEEEEecCCcEEEccCCCCccCCHHHHHHHHHhccCcccCCHHHhCCCCHHHHHHHHhC
Confidence            99999999  65  2        1        2 388888888887776665441112346889999999999985

>PF01841 Transglut_core: Transglutaminase-like superfamily; InterPro: IPR002931 This domain is found in many proteins known to have transglutaminase activity, i

Probab=91.30  E-value=0.031  Score=44.60  Aligned_cols=62  Identities=15%  Similarity=0.172  Sum_probs=46.3

Q ss_pred             CCCCHHHHHHHHHHHhhhhcCCCCCCCCCCcCCCccccHHHHHhcCcCchHHHHHHHHHHHHHcCCC
Q 020908          135 FRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW  201 (320)
Q Consensus       135 ~~~~p~~~l~~Ln~vLf~elGF~Gn~~~~~Y~dp~Ns~L~~VLerR~GiPIsLsIIYleVArRLGlp  201 (320)
                      ...++.+++++|..++-+...|. +    .+..+.......||.++.|.+...+.++..++|.+|||
T Consensus        10 ~~~~~~~~~~~i~~~v~~~~~y~-~----~~~~~~~~~~~~~l~~~~G~C~~~a~l~~allr~~Gip   71 (113)
T PF01841_consen   10 NSKTPLEKAKAIYDWVRSNIRYD-D----PNYSPGPRDASEVLRSGRGDCEDYASLFVALLRALGIP   71 (113)
T ss_dssp             TSHCHHCCCCCCCCCCCCCCCEC------TCCCCCCTTHHHHHHCEEESHHHHHHHHHHHHHHHT--
T ss_pred             CCCCHHHHHHHHHHHHHhCcEEe-C----CCCCCCCCCHHHHHHcCCCccHHHHHHHHHHHhhCCCc
Confidence            45666677777777776666666 1    23344455589999999999999999999999999999

e. which cross-link proteins through an acyl-transfer reaction between the gamma-carboxamide group of peptide-bound glutamine and the epsilon-amino group of peptide-bound lysine, resulting in a epsilon-(gamma-glutamyl)lysine isopeptide bond. Tranglutaminases have been found in a diverse range of species, from bacteria through to mammals. The enzymes require calcium binding and their activity leads to post-translational modification of proteins through acyl-transfer reactions, involving peptidyl glutamine residues as acyl donors and a variety of primary amines as acyl acceptors, with the generation of proteinase resistant isopeptide bonds []. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterised transglutaminase, the human blood clotting factor XIIIa' []. On the basis of the experimentally demonstrated activity of the Methanobacterium phage psiM2 pseudomurein endoisopeptidase [], it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease []. A subunit of plasma Factor XIII revealed that each Factor XIIIA subunit is composed of four domains (termed N-terminal beta-sandwich, core domain (containing the catalytic and the regulatory sites), and C-terminal beta-barrels 1 and 2) and that two monomers assemble into the native dimer through the surfaces in domains 1 and 2, in opposite orientation. This organisation in four domains is highly conserved during evolution among transglutaminase isoforms [].; PDB: 2F4M_A 2F4O_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B ....

>PF13371 TPR_9: Tetratricopeptide repeat

Probab=90.03  E-value=0.29  Score=35.84  Aligned_cols=64  Identities=23%  Similarity=0.169  Sum_probs=48.6

Q ss_pred             HHHHhcccCCCch------hhhHhhhhhHHhhhhccCCchhhHhhhhHHHHHHHHHhhhhccCCcchhHhhhh
Q 020908          250 LKNAFWPFQHDRS------RSLFLRAARAANCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALA  316 (320)
Q Consensus       250 Lk~~y~~~~~~~s------~~l~L~~~~~a~~~dr~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~~~~~~  316 (320)
                      |+.+|++.++.+.      +.+.+.|.+......++.   .+.+++....|...|++.+-.+|+..+.+...+
T Consensus         1 l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~~a~---~~~~~g~~~~A~~~l~~~l~~~p~~~~~~~~~a   70 (73)
T PF13371_consen    1 LKQIYLQQEDYEEALEVLERALELDPDDPELWLQRAR---CLFQLGRYEEALEDLERALELSPDDPDARALRA   70 (73)
T ss_pred             CHHHHHhCCCHHHHHHHHHHHHHhCcccchhhHHHHH---HHHHhccHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence            5778888777443      344445555556666665   899999999999999999999999888876654

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	320
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 57/229 (24%)

Query: 62  REGFYSQIKR-LSNVERETSISINKCVDLGKTALHIAAEDDSLISHSSVPLPVDALISQL 120
           R   Y ++++ L  +    ++ I+  +  GKT + +                   +  ++
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS------------YKVQCKM 180

Query: 121 DD----LSVGYCSHYSSGFRSSPESVLESIER--YLFDKKGFRRTNARNQLIEPRSLYLH 174
           D     L++  C+        SPE+VLE +++  Y  D        +R+       L +H
Sbjct: 181 DFKIFWLNLKNCN--------SPETVLEMLQKLLYQIDPNW----TSRSDHSSNIKLRIH 228

Query: 175 SVLTHRTGSAVMLSLIYSEILKMLR-IWGLIDFDVEISFPLDLYSLPRGYQKQK----SK 229
           S+        ++ S  Y   L +L  +      + +     +L          K    ++
Sbjct: 229 SIQAEL--RRLLKSKPYENCLLVLLNVQ-----NAKAWNAFNLSC--------KILLTTR 273

Query: 230 DSDQPHIITVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQ 278
                 +            +L +       D  +SL     +  +C  Q
Sbjct: 274 FKQ---VTDFLSAATTTHISLDHHSMTLTPDEVKSLL---LKYLDCRPQ 316

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
3isr_A	293	Transglutaminase-like enzymes, putative cysteine;	89.54
3kd4_A	506	Putative protease; structural genomics, joint cent	89.4

>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}

Probab=89.54  E-value=0.72  Score=43.08  Aligned_cols=72  Identities=13%  Similarity=0.134  Sum_probs=55.3

Q ss_pred             HHHHHHHHHhchhCCCCCCCHHHHHHHHHHHhhhhcCCCCCCCCCCcCCCccccHHHHHhcCcCchHHHHHHHHHHHHHc
Q 020908          119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML  198 (320)
Q Consensus       119 ~LD~La~ev~~~~~~~~~~~p~~~l~~Ln~vLf~elGF~Gn~~~~~Y~dp~Ns~L~~VLerR~GiPIsLsIIYleVArRL  198 (320)
                      ++.++|.++..     ...++.+++++|++++.++..|.....  .-    ..-...+|+.|+|.+--.+.+++.++|.+
T Consensus       127 ~i~~~A~~~~~-----~~~~~~~~~~ai~~~v~~~~~Y~~~~~--~~----~~~a~~~l~~~~G~C~d~A~l~val~Ra~  195 (293)
T 3isr_A          127 KLQKLAYKEFG-----KIENVYSKVLAITDWIYNNVEYISGST--NS----QTSAFDTITERAGVCRDFAHLGIALCRAL  195 (293)
T ss_dssp             GSHHHHHHHHT-----TCCSHHHHHHHHHHHHHHHSEECTTSC--CT----TCCHHHHHHHCEECHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhc-----cCCCHHHHHHHHHHHHHhhcEEeccCC--CC----CCCHHHhhcCCcEehHHHHHHHHHHHHHC
Confidence            46667766643     234567899999999999887765433  11    12346799999999999999999999999


Q ss_pred             CCC
Q 020908          199 RIW  201 (320)
Q Consensus       199 Glp  201 (320)
                      |||
T Consensus       196 GIP  198 (293)
T 3isr_A          196 SIP  198 (293)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            999

>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}

Probab=89.40  E-value=0.9  Score=45.33  Aligned_cols=76  Identities=8%  Similarity=0.056  Sum_probs=56.6

Q ss_pred             HHHHHHHHHhchhCCCCCCCHHHHHHHHHHHhhhhcCCCCCCCCCCcCCCccccHHHHHhcCcCchHHHHHHHHHHHHHc
Q 020908          119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML  198 (320)
Q Consensus       119 ~LD~La~ev~~~~~~~~~~~p~~~l~~Ln~vLf~elGF~Gn~~~~~Y~dp~Ns~L~~VLerR~GiPIsLsIIYleVArRL  198 (320)
                      .+.+++.++..     ...++.+++++|-.+.-++..|.+...  .+......-...||++|.|.+...+.+++.++|.+
T Consensus       229 ~i~~~a~~l~~-----~~~~~~ek~~~iy~~V~~~i~y~~~~~--~~~g~~~~~a~~vl~~~~G~C~d~a~Ll~AllRa~  301 (506)
T 3kd4_A          229 ESKTFAQFLTD-----KSGNEQEKVNIIRDHILNNLSTCPIPM--AMTGYTVRDIDTVLRSAYGTPLEIAQLLNVMLNAA  301 (506)
T ss_dssp             HHHHHHHHHHS-----SCSSHHHHHHHHHHHHHHHCEECCCCG--GGGTTCCCCHHHHHHHTEECHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHh-----cCCCHHHHHHHHHHHHHhccEecceec--ccCCCCCCCHHHHHHhCCcchHHHHHHHHHHHHHC
Confidence            44455555533     346788999999999888877765332  22221223478999999999999999999999999


Q ss_pred             CCC
Q 020908          199 RIW  201 (320)
Q Consensus       199 Glp  201 (320)
                      |||
T Consensus       302 GIp  304 (506)
T 3kd4_A          302 GIP  304 (506)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            999

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00