Citrus Sinensis ID: 020979
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| 225436954 | 756 | PREDICTED: phosphate metabolism protein | 0.968 | 0.408 | 0.741 | 1e-134 | |
| 296086714 | 766 | unnamed protein product [Vitis vinifera] | 0.968 | 0.403 | 0.741 | 1e-134 | |
| 3924615 | 680 | hypothetical protein [Arabidopsis thalia | 0.984 | 0.461 | 0.736 | 1e-132 | |
| 15236212 | 785 | ERD (early-responsive to dehydration str | 0.984 | 0.4 | 0.736 | 1e-132 | |
| 297814009 | 776 | hypothetical protein ARALYDRAFT_352535 [ | 0.984 | 0.404 | 0.739 | 1e-132 | |
| 255584712 | 756 | conserved hypothetical protein [Ricinus | 0.984 | 0.415 | 0.742 | 1e-127 | |
| 356503525 | 756 | PREDICTED: uncharacterized membrane prot | 0.978 | 0.412 | 0.695 | 1e-127 | |
| 356570556 | 756 | PREDICTED: uncharacterized protein RSN1- | 0.978 | 0.412 | 0.692 | 1e-127 | |
| 449436814 | 756 | PREDICTED: uncharacterized membrane prot | 0.987 | 0.416 | 0.686 | 1e-126 | |
| 449515053 | 755 | PREDICTED: uncharacterized membrane prot | 0.984 | 0.415 | 0.683 | 1e-125 |
| >gi|225436954|ref|XP_002271834.1| PREDICTED: phosphate metabolism protein 7-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/310 (74%), Positives = 271/310 (87%), Gaps = 1/310 (0%)
Query: 3 MSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGV 62
MSKIEG SLSSLE+R+AGKYYLFIL NVFLGSI+TGTA QQL+ F+N+ PTEIPKT GV
Sbjct: 445 MSKIEGLISLSSLEQRTAGKYYLFILVNVFLGSIITGTAFQQLHKFINQSPTEIPKTVGV 504
Query: 63 SIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFG 122
SIPMKATFFITY MVDGWAG+AAEI+RLVPL++FHLKN FLVKT+QDR++AMDPG L F
Sbjct: 505 SIPMKATFFITYIMVDGWAGVAAEILRLVPLIMFHLKNAFLVKTEQDREQAMDPGCLNFS 564
Query: 123 TNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDV 182
+EPRIQ Y LLGLVYA VTPILLPFII+FF+F+Y+VFRHQ+INVYDQ YESGAAFWP V
Sbjct: 565 ISEPRIQLYFLLGLVYAAVTPILLPFIIIFFSFAYMVFRHQIINVYDQKYESGAAFWPSV 624
Query: 183 HRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQE 242
H+R+II L+ISQLLLMGLL+T+ KSTP LI+LPV+T WFH +C GRFE AFV FPLQE
Sbjct: 625 HQRVIIGLMISQLLLMGLLNTKDFSKSTPFLIVLPVLTFWFHRFCNGRFESAFVRFPLQE 684
Query: 243 AMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNWNA 302
AMVKDTLERATEPNLNL+ YLQDAY+HPVFKG + + P ++EEE+ +PLVATKR ++ +
Sbjct: 685 AMVKDTLERATEPNLNLKNYLQDAYIHPVFKGGEFERPEVIDEEEN-NPLVATKRSSYIS 743
Query: 303 SKNESDASSK 312
SK+ S+ SS+
Sbjct: 744 SKHGSELSSE 753
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086714|emb|CBI32349.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|3924615|gb|AAC79116.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15236212|ref|NP_192199.1| ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana] gi|4263507|gb|AAD15333.1| hypothetical protein [Arabidopsis thaliana] gi|7269775|emb|CAB77775.1| hypothetical protein [Arabidopsis thaliana] gi|332656848|gb|AEE82248.1| ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297814009|ref|XP_002874888.1| hypothetical protein ARALYDRAFT_352535 [Arabidopsis lyrata subsp. lyrata] gi|297320725|gb|EFH51147.1| hypothetical protein ARALYDRAFT_352535 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|255584712|ref|XP_002533077.1| conserved hypothetical protein [Ricinus communis] gi|223527141|gb|EEF29316.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356503525|ref|XP_003520558.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356570556|ref|XP_003553451.1| PREDICTED: uncharacterized protein RSN1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449436814|ref|XP_004136187.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449515053|ref|XP_004164564.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| TAIR|locus:2140210 | 785 | AT4G02900 [Arabidopsis thalian | 0.978 | 0.397 | 0.683 | 6.1e-110 | |
| TAIR|locus:2089850 | 756 | AT3G21620 "AT3G21620" [Arabido | 0.962 | 0.406 | 0.608 | 1.4e-96 | |
| TAIR|locus:2134882 | 772 | AT4G04340 [Arabidopsis thalian | 0.974 | 0.402 | 0.593 | 1.8e-96 | |
| TAIR|locus:2120673 | 771 | AT4G22120 [Arabidopsis thalian | 0.937 | 0.387 | 0.594 | 1.4e-94 | |
| TAIR|locus:2130130 | 761 | AT4G15430 "AT4G15430" [Arabido | 0.937 | 0.392 | 0.597 | 7.8e-94 | |
| TAIR|locus:2008860 | 771 | AT1G11960 "AT1G11960" [Arabido | 0.981 | 0.405 | 0.557 | 8.1e-92 | |
| TAIR|locus:2027119 | 769 | AT1G62320 "AT1G62320" [Arabido | 0.968 | 0.401 | 0.551 | 1.4e-87 | |
| TAIR|locus:2031735 | 806 | AT1G32090 "AT1G32090" [Arabido | 0.962 | 0.380 | 0.535 | 1.8e-85 | |
| TAIR|locus:2102117 | 703 | HYP1 "hypothetical protein 1" | 0.849 | 0.385 | 0.303 | 3.2e-37 | |
| TAIR|locus:2007126 | 711 | AT1G69450 [Arabidopsis thalian | 0.890 | 0.399 | 0.269 | 1.1e-33 |
| TAIR|locus:2140210 AT4G02900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 214/313 (68%), Positives = 242/313 (77%)
Query: 1 MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTF 60
MTMS+IEG+TSLS L++RSA KY+ FI+ NVFLGSI+TGTA QQL +FL +PPTEIPKT
Sbjct: 443 MTMSQIEGYTSLSYLDRRSAEKYFWFIIVNVFLGSIITGTAFQQLKSFLEQPPTEIPKTV 502
Query: 61 GVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLR 120
GVSIPMKATFFITY MVDGWAGIAAEI+R+VPLVIFHLKNTFLVKT+QDR +AMDPG+L
Sbjct: 503 GVSIPMKATFFITYIMVDGWAGIAAEILRVVPLVIFHLKNTFLVKTEQDRQQAMDPGHLD 562
Query: 121 FGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWP 180
F T+EPRIQFY LLGLVYA V PILLPFIIVFFAF+YVVFRHQVINVYDQ YESGA +WP
Sbjct: 563 FATSEPRIQFYFLLGLVYAAVAPILLPFIIVFFAFAYVVFRHQVINVYDQKYESGARYWP 622
Query: 181 DVHRRXXXXXXXXXXXXXXXXXTRKADKSXXXXXXXXXXXXWFHVYCKGRFEPAFVTFPL 240
DVHRR T+K K WF+ YC GRFE AF FPL
Sbjct: 623 DVHRRLIICLIISQLLMMGLLSTKKFAKVTALLLPQPILTFWFYRYCAGRFESAFSKFPL 682
Query: 241 QEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNW 300
QEAMVKDTLE+ATEPNLNL+ YL+DAYVHPVFKG P V+EEE S+PLV TKR +
Sbjct: 683 QEAMVKDTLEKATEPNLNLKEYLKDAYVHPVFKGNDFDRPRVVDEEE-SNPLVRTKRTSQ 741
Query: 301 NASKNESDASSKA 313
++ S+ASS A
Sbjct: 742 GTTRYNSEASSSA 754
|
|
| TAIR|locus:2089850 AT3G21620 "AT3G21620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134882 AT4G04340 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2120673 AT4G22120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130130 AT4G15430 "AT4G15430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008860 AT1G11960 "AT1G11960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027119 AT1G62320 "AT1G62320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031735 AT1G32090 "AT1G32090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2102117 HYP1 "hypothetical protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007126 AT1G69450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00023682001 | SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (756 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 319 | |||
| pfam02714 | 325 | pfam02714, DUF221, Domain of unknown function DUF2 | 1e-64 | |
| COG5594 | 827 | COG5594, COG5594, Uncharacterized integral membran | 1e-30 |
| >gnl|CDD|190398 pfam02714, DUF221, Domain of unknown function DUF221 | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 1e-64
Identities = 69/200 (34%), Positives = 117/200 (58%), Gaps = 2/200 (1%)
Query: 3 MSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGV 62
+SK++G S S +E KY+ F++ NVFL + TA + ++ P T IP
Sbjct: 127 LSKLQGHPSRSDVELSVQSKYFAFLVVNVFLVVTLASTASSLITEIIDNP-TSIPTLLAT 185
Query: 63 SIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAM-DPGYLRF 121
++P + FFI+Y ++ G +G A E+++L PL++++++ FL KT +D+ E P +
Sbjct: 186 NLPKASNFFISYILLQGLSGAAGELLQLGPLILYYIRRKFLDKTPRDKWERYTTPPSFDY 245
Query: 122 GTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPD 181
GT P +GL+Y+ + P++LPF +V+F Y V+++Q++ VY YESG FWP
Sbjct: 246 GTVYPVFLLIFTIGLIYSVIAPLILPFGLVYFGLGYFVYKYQLLYVYVTKYESGGLFWPR 305
Query: 182 VHRRIIINLIISQLLLMGLL 201
R+++ L + QL L+GL
Sbjct: 306 ALNRLLVGLYLFQLCLIGLF 325
|
This family consists of hypothetical transmembrane proteins none of which have any function, the aligned region is at 538 residues at maximum length. Length = 325 |
| >gnl|CDD|227881 COG5594, COG5594, Uncharacterized integral membrane protein [Function unknown] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 319 | |||
| KOG1134 | 728 | consensus Uncharacterized conserved protein [Gener | 100.0 | |
| COG5594 | 827 | Uncharacterized integral membrane protein [Functio | 100.0 | |
| PF02714 | 325 | DUF221: Domain of unknown function DUF221; InterPr | 100.0 | |
| PF04547 | 452 | Anoctamin: Calcium-activated chloride channel; Int | 98.12 | |
| KOG2513 | 647 | consensus Protein required for meiotic chromosome | 80.82 | |
| PF15176 | 102 | LRR19-TM: Leucine-rich repeat family 19 TM domain | 80.71 |
| >KOG1134 consensus Uncharacterized conserved protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-61 Score=494.78 Aligned_cols=295 Identities=48% Similarity=0.880 Sum_probs=273.8
Q ss_pred CccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCChHHHHHhhcCcchHHHHHHHHHHhh
Q 020979 1 MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGW 80 (319)
Q Consensus 1 ~~ls~~eG~~S~S~~e~~v~~k~f~F~v~nvflv~~l~gs~~~~l~~~~~~p~~~i~~~L~~~lP~~S~FFi~yii~~~~ 80 (319)
+++|++||++|+|++|++++.|||+|+++|+|++.+++||+++++..++++| .+++..+|.++|.+|+||++||+++||
T Consensus 431 ~~ls~~eG~~s~S~~e~~a~~k~~~F~~~nvFl~~~l~~sa~~~~~~~l~~p-~~i~~~la~~lP~~a~Ff~~yii~~g~ 509 (728)
T KOG1134|consen 431 RYLSKLEGLISRSEEERSALNKYYIFLLVNVFLVVTLSGSALRQLLSILSTP-RLIPKLLAAALPKQASFFITYIITSGW 509 (728)
T ss_pred HHHHHhcCccchhHHHHHHHHhHHHHHHhhhHHHhhhhHHHHHHHHHHhcCH-hHHHHHHhhhChhhHHHHHHHHHHhcc
Confidence 4789999999999999999999999999999999999999999999999998 899999999999999999999999999
Q ss_pred HHhHHHHHhHHHHHHHHHHHhhccCChhhHHhhcCC-CCCCCccccchhhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 020979 81 AGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDP-GYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVV 159 (319)
Q Consensus 81 ~~~~~~Llr~~~Li~~~~~~~~~~~TpR~~~~~~~p-~~f~yg~~~p~~llv~~I~l~YsviaPlIlpf~~~yF~~~~~v 159 (319)
+|.++||+|+.||+++++++.+..+|||++.++++| +.+++|..||+.+++++|+++||++||+|+|||++||+++|+|
T Consensus 510 ~g~~~ellrl~~Li~~~i~~~~~~~t~~~~~e~~~p~~~~~~g~~yP~~~~~f~i~i~YsviaPlILpF~lvyF~l~y~v 589 (728)
T KOG1134|consen 510 AGFAGELLRLVPLIIYLLKKLFLKSTPRDREERYEPLSSFYFGTIYPRILLIFTIGICYSVIAPLILPFGLVYFCLAYLV 589 (728)
T ss_pred chhhHHHhcchhHHHHHHHHHHcccchhhhhhhcCCccccchhhhccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987 7899999999999999999999999999999999999999999
Q ss_pred HhhheeEEeccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHhhhcCcccccCC
Q 020979 160 FRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFP 239 (319)
Q Consensus 160 yKyqllyVy~~~~ESgG~~wp~~~~~~~~~l~i~Ql~m~g~f~lk~~~~~~~~~i~L~i~ti~f~~y~~~~f~~~~~~~p 239 (319)
||||++|||.++|||||++||.+++++++|++++|++|+|+|++|+++..+.+++|++++|++||.+|+.+|.|.+.++|
T Consensus 590 yr~ql~yvy~~~yes~g~~wp~ih~~ii~~l~l~ql~l~gl~~~k~~~~~s~~~~~l~~lTi~~~~~c~~rf~p~f~~~~ 669 (728)
T KOG1134|consen 590 YRYQLIYVYNQKYESGGRFWPDIHRRIIFGLILFQLILFGLFSLKKGAVASVLLFPLIVLTILFHIYCKGRFLPLFIAYP 669 (728)
T ss_pred HhhhhheeecccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhhChhhhccCCCh-hhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccc
Q 020979 240 LQEAMVKDTLERATEPNL-NLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKR 297 (319)
Q Consensus 240 l~~a~~~D~~~~~~~~~~-~~~~~~~~~Y~~PaL~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (319)
++++..+|..++..+++. ...+.+.++|.||++...++++. .++..+++++++.||+
T Consensus 670 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 727 (728)
T KOG1134|consen 670 IEEAEVDDTLDEEREPNMENLYNYLKSAYVLPVFLSGSDSDG-SELSSEEKSPIVLTKR 727 (728)
T ss_pred hhhhhhccCCccccCCChhhccccccccccCccccccccccc-cccccccCCcHhhcCC
Confidence 999999999886566644 56678899999999998885542 2222333366666664
|
|
| >COG5594 Uncharacterized integral membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF02714 DUF221: Domain of unknown function DUF221; InterPro: IPR003864 This domain is found in a family of hypothetical transmembrane proteins none of which have any known function, the aligned region is at 538 residues at maximum length | Back alignment and domain information |
|---|
| >PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [] | Back alignment and domain information |
|---|
| >KOG2513 consensus Protein required for meiotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00