Citrus Sinensis ID: 020979


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNWNASKNESDASSKAGSGTGQ
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHccHHHcccccHHHHHHHHHHccccccccccccccccHcccccccccEcccccccccccccccccccccccccc
mtmskiegftslsslekrsagkyYLFILFNVFLGSIVTGTALQQLNtflneppteipktfgvsipmkATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKntflvktdqdrdeamdpgylrfgtnepRIQFYILLGlvyapvtpilLPFIIVFFAFSYVVFRHQVINVYDQIYesgaafwpdVHRRIIINLIISQLLLMGLLstrkadkstpllilLPVITIWFHVYckgrfepafvtfplqeAMVKDTLEratepnlnlrTYLQdayvhpvfkgiqeqnppaveeeedssplvatkrrnwnasknesdasskagsgtgq
mtmskiegftslsSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTflvktdqdrdeAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKrrnwnasknesdasskagsgtgq
MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRiiinliisqlllmgllsTRKADKStpllillpvitiWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNWNASKNESDASSKAGSGTGQ
*******************AGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGI********************************************
MTMSK**GFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQ*************************YVHPV************************************************
MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQ*************LVATKRRNW*******************
MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFK**********************************************
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNWNASKNESDASSKAGSGTGQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q09809793 Uncharacterized membrane yes no 0.623 0.250 0.248 3e-14
Q03516 953 Uncharacterized protein R yes no 0.717 0.240 0.212 1e-13
Q12252 991 Phosphate metabolism prot no no 0.742 0.239 0.225 9e-12
Q06538782 Uncharacterized membrane no no 0.683 0.278 0.247 3e-10
Q09766 871 Uncharacterized membrane no no 0.758 0.277 0.203 1e-09
O43022865 Uncharacterized protein C no no 0.614 0.226 0.221 8e-07
>sp|Q09809|YAB9_SCHPO Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2G11.09 PE=3 SV=2 Back     alignment and function desciption
 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 6/205 (2%)

Query: 3   MSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTG-TALQQLNTFLNEPPTEIPKTFG 61
           +S ++G +S +  E  + GK Y ++  N FL  ++ G T++ +L     +  T       
Sbjct: 514 LSSMQGLSSRAEEEIYAVGKNYAYLFVNFFLVYVIAGSTSIWELA----KDTTSFAHFLA 569

Query: 62  VSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRF 121
             +P +A FFI   ++ G      ++I+L  L  + ++ +F+  +   + +   P     
Sbjct: 570 NRLPHQAQFFIDLIVLQGIGMFPLKLIQLGKLSSYFVRRSFVPYSIASK-KFETPDSFSV 628

Query: 122 GTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPD 181
           G   P+  F +L+ L Y+ ++P++L F +++F   ++V+++++I   +    S    W  
Sbjct: 629 GIFLPQPMFIMLICLCYSIISPLILVFGLIYFIIGFLVYKYELIYQMEHPQHSTGELWST 688

Query: 182 VHRRIIINLIISQLLLMGLLSTRKA 206
           +  R+I   +I QL +MGL+S RKA
Sbjct: 689 IFLRMIFGCVIMQLTMMGLMSLRKA 713





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|Q03516|RSN1_YEAST Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1 Back     alignment and function description
>sp|Q12252|PHM7_YEAST Phosphate metabolism protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM7 PE=1 SV=1 Back     alignment and function description
>sp|Q06538|YL241_YEAST Uncharacterized membrane protein YLR241W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR241W PE=1 SV=1 Back     alignment and function description
>sp|Q09766|YA7D_SCHPO Uncharacterized membrane protein C24H6.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.13 PE=1 SV=1 Back     alignment and function description
>sp|O43022|YGV8_SCHPO Uncharacterized protein C354.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC354.08c PE=4 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
225436954 756 PREDICTED: phosphate metabolism protein 0.968 0.408 0.741 1e-134
296086714 766 unnamed protein product [Vitis vinifera] 0.968 0.403 0.741 1e-134
3924615 680 hypothetical protein [Arabidopsis thalia 0.984 0.461 0.736 1e-132
15236212 785 ERD (early-responsive to dehydration str 0.984 0.4 0.736 1e-132
297814009 776 hypothetical protein ARALYDRAFT_352535 [ 0.984 0.404 0.739 1e-132
255584712 756 conserved hypothetical protein [Ricinus 0.984 0.415 0.742 1e-127
356503525 756 PREDICTED: uncharacterized membrane prot 0.978 0.412 0.695 1e-127
356570556 756 PREDICTED: uncharacterized protein RSN1- 0.978 0.412 0.692 1e-127
449436814 756 PREDICTED: uncharacterized membrane prot 0.987 0.416 0.686 1e-126
449515053 755 PREDICTED: uncharacterized membrane prot 0.984 0.415 0.683 1e-125
>gi|225436954|ref|XP_002271834.1| PREDICTED: phosphate metabolism protein 7-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/310 (74%), Positives = 271/310 (87%), Gaps = 1/310 (0%)

Query: 3   MSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGV 62
           MSKIEG  SLSSLE+R+AGKYYLFIL NVFLGSI+TGTA QQL+ F+N+ PTEIPKT GV
Sbjct: 445 MSKIEGLISLSSLEQRTAGKYYLFILVNVFLGSIITGTAFQQLHKFINQSPTEIPKTVGV 504

Query: 63  SIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLRFG 122
           SIPMKATFFITY MVDGWAG+AAEI+RLVPL++FHLKN FLVKT+QDR++AMDPG L F 
Sbjct: 505 SIPMKATFFITYIMVDGWAGVAAEILRLVPLIMFHLKNAFLVKTEQDREQAMDPGCLNFS 564

Query: 123 TNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPDV 182
            +EPRIQ Y LLGLVYA VTPILLPFII+FF+F+Y+VFRHQ+INVYDQ YESGAAFWP V
Sbjct: 565 ISEPRIQLYFLLGLVYAAVTPILLPFIIIFFSFAYMVFRHQIINVYDQKYESGAAFWPSV 624

Query: 183 HRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFPLQE 242
           H+R+II L+ISQLLLMGLL+T+   KSTP LI+LPV+T WFH +C GRFE AFV FPLQE
Sbjct: 625 HQRVIIGLMISQLLLMGLLNTKDFSKSTPFLIVLPVLTFWFHRFCNGRFESAFVRFPLQE 684

Query: 243 AMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNWNA 302
           AMVKDTLERATEPNLNL+ YLQDAY+HPVFKG + + P  ++EEE+ +PLVATKR ++ +
Sbjct: 685 AMVKDTLERATEPNLNLKNYLQDAYIHPVFKGGEFERPEVIDEEEN-NPLVATKRSSYIS 743

Query: 303 SKNESDASSK 312
           SK+ S+ SS+
Sbjct: 744 SKHGSELSSE 753




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086714|emb|CBI32349.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|3924615|gb|AAC79116.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15236212|ref|NP_192199.1| ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana] gi|4263507|gb|AAD15333.1| hypothetical protein [Arabidopsis thaliana] gi|7269775|emb|CAB77775.1| hypothetical protein [Arabidopsis thaliana] gi|332656848|gb|AEE82248.1| ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297814009|ref|XP_002874888.1| hypothetical protein ARALYDRAFT_352535 [Arabidopsis lyrata subsp. lyrata] gi|297320725|gb|EFH51147.1| hypothetical protein ARALYDRAFT_352535 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255584712|ref|XP_002533077.1| conserved hypothetical protein [Ricinus communis] gi|223527141|gb|EEF29316.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356503525|ref|XP_003520558.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Glycine max] Back     alignment and taxonomy information
>gi|356570556|ref|XP_003553451.1| PREDICTED: uncharacterized protein RSN1-like [Glycine max] Back     alignment and taxonomy information
>gi|449436814|ref|XP_004136187.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515053|ref|XP_004164564.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2140210785 AT4G02900 [Arabidopsis thalian 0.978 0.397 0.683 6.1e-110
TAIR|locus:2089850756 AT3G21620 "AT3G21620" [Arabido 0.962 0.406 0.608 1.4e-96
TAIR|locus:2134882772 AT4G04340 [Arabidopsis thalian 0.974 0.402 0.593 1.8e-96
TAIR|locus:2120673771 AT4G22120 [Arabidopsis thalian 0.937 0.387 0.594 1.4e-94
TAIR|locus:2130130761 AT4G15430 "AT4G15430" [Arabido 0.937 0.392 0.597 7.8e-94
TAIR|locus:2008860771 AT1G11960 "AT1G11960" [Arabido 0.981 0.405 0.557 8.1e-92
TAIR|locus:2027119769 AT1G62320 "AT1G62320" [Arabido 0.968 0.401 0.551 1.4e-87
TAIR|locus:2031735806 AT1G32090 "AT1G32090" [Arabido 0.962 0.380 0.535 1.8e-85
TAIR|locus:2102117703 HYP1 "hypothetical protein 1" 0.849 0.385 0.303 3.2e-37
TAIR|locus:2007126711 AT1G69450 [Arabidopsis thalian 0.890 0.399 0.269 1.1e-33
TAIR|locus:2140210 AT4G02900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 214/313 (68%), Positives = 242/313 (77%)

Query:     1 MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTF 60
             MTMS+IEG+TSLS L++RSA KY+ FI+ NVFLGSI+TGTA QQL +FL +PPTEIPKT 
Sbjct:   443 MTMSQIEGYTSLSYLDRRSAEKYFWFIIVNVFLGSIITGTAFQQLKSFLEQPPTEIPKTV 502

Query:    61 GVSIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDPGYLR 120
             GVSIPMKATFFITY MVDGWAGIAAEI+R+VPLVIFHLKNTFLVKT+QDR +AMDPG+L 
Sbjct:   503 GVSIPMKATFFITYIMVDGWAGIAAEILRVVPLVIFHLKNTFLVKTEQDRQQAMDPGHLD 562

Query:   121 FGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWP 180
             F T+EPRIQFY LLGLVYA V PILLPFIIVFFAF+YVVFRHQVINVYDQ YESGA +WP
Sbjct:   563 FATSEPRIQFYFLLGLVYAAVAPILLPFIIVFFAFAYVVFRHQVINVYDQKYESGARYWP 622

Query:   181 DVHRRXXXXXXXXXXXXXXXXXTRKADKSXXXXXXXXXXXXWFHVYCKGRFEPAFVTFPL 240
             DVHRR                 T+K  K             WF+ YC GRFE AF  FPL
Sbjct:   623 DVHRRLIICLIISQLLMMGLLSTKKFAKVTALLLPQPILTFWFYRYCAGRFESAFSKFPL 682

Query:   241 QEAMVKDTLERATEPNLNLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKRRNW 300
             QEAMVKDTLE+ATEPNLNL+ YL+DAYVHPVFKG     P  V+EEE S+PLV TKR + 
Sbjct:   683 QEAMVKDTLEKATEPNLNLKEYLKDAYVHPVFKGNDFDRPRVVDEEE-SNPLVRTKRTSQ 741

Query:   301 NASKNESDASSKA 313
               ++  S+ASS A
Sbjct:   742 GTTRYNSEASSSA 754




GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA
TAIR|locus:2089850 AT3G21620 "AT3G21620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134882 AT4G04340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120673 AT4G22120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130130 AT4G15430 "AT4G15430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008860 AT1G11960 "AT1G11960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027119 AT1G62320 "AT1G62320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031735 AT1G32090 "AT1G32090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102117 HYP1 "hypothetical protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007126 AT1G69450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00023682001
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (756 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
pfam02714325 pfam02714, DUF221, Domain of unknown function DUF2 1e-64
COG5594827 COG5594, COG5594, Uncharacterized integral membran 1e-30
>gnl|CDD|190398 pfam02714, DUF221, Domain of unknown function DUF221 Back     alignment and domain information
 Score =  206 bits (526), Expect = 1e-64
 Identities = 69/200 (34%), Positives = 117/200 (58%), Gaps = 2/200 (1%)

Query: 3   MSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGV 62
           +SK++G  S S +E     KY+ F++ NVFL   +  TA   +   ++ P T IP     
Sbjct: 127 LSKLQGHPSRSDVELSVQSKYFAFLVVNVFLVVTLASTASSLITEIIDNP-TSIPTLLAT 185

Query: 63  SIPMKATFFITYTMVDGWAGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAM-DPGYLRF 121
           ++P  + FFI+Y ++ G +G A E+++L PL++++++  FL KT +D+ E    P    +
Sbjct: 186 NLPKASNFFISYILLQGLSGAAGELLQLGPLILYYIRRKFLDKTPRDKWERYTTPPSFDY 245

Query: 122 GTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVVFRHQVINVYDQIYESGAAFWPD 181
           GT  P       +GL+Y+ + P++LPF +V+F   Y V+++Q++ VY   YESG  FWP 
Sbjct: 246 GTVYPVFLLIFTIGLIYSVIAPLILPFGLVYFGLGYFVYKYQLLYVYVTKYESGGLFWPR 305

Query: 182 VHRRIIINLIISQLLLMGLL 201
              R+++ L + QL L+GL 
Sbjct: 306 ALNRLLVGLYLFQLCLIGLF 325


This family consists of hypothetical transmembrane proteins none of which have any function, the aligned region is at 538 residues at maximum length. Length = 325

>gnl|CDD|227881 COG5594, COG5594, Uncharacterized integral membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
KOG1134728 consensus Uncharacterized conserved protein [Gener 100.0
COG5594827 Uncharacterized integral membrane protein [Functio 100.0
PF02714325 DUF221: Domain of unknown function DUF221; InterPr 100.0
PF04547452 Anoctamin: Calcium-activated chloride channel; Int 98.12
KOG2513647 consensus Protein required for meiotic chromosome 80.82
PF15176102 LRR19-TM: Leucine-rich repeat family 19 TM domain 80.71
>KOG1134 consensus Uncharacterized conserved protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=9.7e-61  Score=494.78  Aligned_cols=295  Identities=48%  Similarity=0.880  Sum_probs=273.8

Q ss_pred             CccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCChHHHHHhhcCcchHHHHHHHHHHhh
Q 020979            1 MTMSKIEGFTSLSSLEKRSAGKYYLFILFNVFLGSIVTGTALQQLNTFLNEPPTEIPKTFGVSIPMKATFFITYTMVDGW   80 (319)
Q Consensus         1 ~~ls~~eG~~S~S~~e~~v~~k~f~F~v~nvflv~~l~gs~~~~l~~~~~~p~~~i~~~L~~~lP~~S~FFi~yii~~~~   80 (319)
                      +++|++||++|+|++|++++.|||+|+++|+|++.+++||+++++..++++| .+++..+|.++|.+|+||++||+++||
T Consensus       431 ~~ls~~eG~~s~S~~e~~a~~k~~~F~~~nvFl~~~l~~sa~~~~~~~l~~p-~~i~~~la~~lP~~a~Ff~~yii~~g~  509 (728)
T KOG1134|consen  431 RYLSKLEGLISRSEEERSALNKYYIFLLVNVFLVVTLSGSALRQLLSILSTP-RLIPKLLAAALPKQASFFITYIITSGW  509 (728)
T ss_pred             HHHHHhcCccchhHHHHHHHHhHHHHHHhhhHHHhhhhHHHHHHHHHHhcCH-hHHHHHHhhhChhhHHHHHHHHHHhcc
Confidence            4789999999999999999999999999999999999999999999999998 899999999999999999999999999


Q ss_pred             HHhHHHHHhHHHHHHHHHHHhhccCChhhHHhhcCC-CCCCCccccchhhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 020979           81 AGIAAEIIRLVPLVIFHLKNTFLVKTDQDRDEAMDP-GYLRFGTNEPRIQFYILLGLVYAPVTPILLPFIIVFFAFSYVV  159 (319)
Q Consensus        81 ~~~~~~Llr~~~Li~~~~~~~~~~~TpR~~~~~~~p-~~f~yg~~~p~~llv~~I~l~YsviaPlIlpf~~~yF~~~~~v  159 (319)
                      +|.++||+|+.||+++++++.+..+|||++.++++| +.+++|..||+.+++++|+++||++||+|+|||++||+++|+|
T Consensus       510 ~g~~~ellrl~~Li~~~i~~~~~~~t~~~~~e~~~p~~~~~~g~~yP~~~~~f~i~i~YsviaPlILpF~lvyF~l~y~v  589 (728)
T KOG1134|consen  510 AGFAGELLRLVPLIIYLLKKLFLKSTPRDREERYEPLSSFYFGTIYPRILLIFTIGICYSVIAPLILPFGLVYFCLAYLV  589 (728)
T ss_pred             chhhHHHhcchhHHHHHHHHHHcccchhhhhhhcCCccccchhhhccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999987 7899999999999999999999999999999999999999999


Q ss_pred             HhhheeEEeccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHhhhcCcccccCC
Q 020979          160 FRHQVINVYDQIYESGAAFWPDVHRRIIINLIISQLLLMGLLSTRKADKSTPLLILLPVITIWFHVYCKGRFEPAFVTFP  239 (319)
Q Consensus       160 yKyqllyVy~~~~ESgG~~wp~~~~~~~~~l~i~Ql~m~g~f~lk~~~~~~~~~i~L~i~ti~f~~y~~~~f~~~~~~~p  239 (319)
                      ||||++|||.++|||||++||.+++++++|++++|++|+|+|++|+++..+.+++|++++|++||.+|+.+|.|.+.++|
T Consensus       590 yr~ql~yvy~~~yes~g~~wp~ih~~ii~~l~l~ql~l~gl~~~k~~~~~s~~~~~l~~lTi~~~~~c~~rf~p~f~~~~  669 (728)
T KOG1134|consen  590 YRYQLIYVYNQKYESGGRFWPDIHRRIIFGLILFQLILFGLFSLKKGAVASVLLFPLIVLTILFHIYCKGRFLPLFIAYP  669 (728)
T ss_pred             HhhhhheeecccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHhhhccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHhhhhChhhhccCCCh-hhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccc
Q 020979          240 LQEAMVKDTLERATEPNL-NLRTYLQDAYVHPVFKGIQEQNPPAVEEEEDSSPLVATKR  297 (319)
Q Consensus       240 l~~a~~~D~~~~~~~~~~-~~~~~~~~~Y~~PaL~~~~~~~~~~~~~~~~~~~~~~~~~  297 (319)
                      ++++..+|..++..+++. ...+.+.++|.||++...++++. .++..+++++++.||+
T Consensus       670 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~  727 (728)
T KOG1134|consen  670 IEEAEVDDTLDEEREPNMENLYNYLKSAYVLPVFLSGSDSDG-SELSSEEKSPIVLTKR  727 (728)
T ss_pred             hhhhhhccCCccccCCChhhccccccccccCccccccccccc-cccccccCCcHhhcCC
Confidence            999999999886566644 56678899999999998885542 2222333366666664



>COG5594 Uncharacterized integral membrane protein [Function unknown] Back     alignment and domain information
>PF02714 DUF221: Domain of unknown function DUF221; InterPro: IPR003864 This domain is found in a family of hypothetical transmembrane proteins none of which have any known function, the aligned region is at 538 residues at maximum length Back     alignment and domain information
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [] Back     alignment and domain information
>KOG2513 consensus Protein required for meiotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00