Citrus Sinensis ID: 021048


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTADAPTTSPSPSPSPASLPPPPTPTPTADQPPASQDKSTNSATQKGKASPSTSATFVLVLVPLLFWQYL
cccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEccccccEEEEEEcccccccccHHHHHHHHHHHHcccccccccEEEEcccEEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcHHHHHHHHHHHHHEEEEEEc
ccccHHHHHHHHHHHHHHHHHHHHHccccccHccccccccccccccHHHHHHHHHHHHcccccccccccEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEEcccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHcccccccEEEccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHc
MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVcssnqgnftvNSTYQANLNHLLSSltsntkidtgffnisygqnldkvnamglcrgdvkpdscrsCIATAtlalptrcpnqkEAIIWYdncmlrysnrfffgnmefgprfsmynlknasdastFNQAVKSLLDSLkikaapgdkfatgnantsagagsQTIYALVQctpdlseqqCIDCLNNatellpkccdgrlggrviapscnfryeidrfydvtadapttspspspspaslpppptptptadqppasqdkstnsatqkgkaspstsATFVLVLVPLLFWQYL
MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATatlalptrcpnqKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTADAPTTSPSPSPSPASLPPPPTPTPTADQPPASQDKSTNSAtqkgkaspstsatfVLVLVPLLFWQYL
MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQAnlnhllssltsntKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFatgnantsagagsQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVtadapttspspspspaslpppptptptadqppasqDKSTNSATQKGKASPSTSATFVLVLVPLLFWQYL
*****LLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIK*****************AGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVT****************************************************ATFVLVLVPLLFWQY*
***SSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTA******************************************KGKASPSTSATFVLVLVPLLFWQYL
MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTAD************************************************TSATFVLVLVPLLFWQYL
***SSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTA*************************************NSATQKGKASPSTSATFVLVLVPLLFWQYL
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SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRFYDVTADAPTTSPSPSPSPASLPPPPTPTPTADQPPASQDKSTNSATQKGKASPSTSATFVLVLVPLLFWQYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query318 2.2.26 [Sep-21-2011]
Q9LRJ9252 Cysteine-rich repeat secr yes no 0.707 0.892 0.461 7e-52
Q9T0J1 665 Cysteine-rich receptor-li no no 0.732 0.350 0.426 8e-50
Q8S9L6 679 Cysteine-rich receptor-li no no 0.801 0.375 0.414 7e-48
Q9M0X5 675 Cysteine-rich receptor-li no no 0.757 0.357 0.440 3e-46
O49564 642 Cysteine-rich receptor-li no no 0.880 0.436 0.389 2e-44
O65405 683 Cysteine-rich receptor-li no no 0.858 0.399 0.386 1e-43
Q9LRL4262 Putative cysteine-rich re no no 0.770 0.935 0.366 4e-40
Q9LRL8256 Putative cysteine-rich re no no 0.716 0.890 0.394 9e-40
Q9SVI0266 Cysteine-rich repeat secr no no 0.754 0.902 0.349 2e-38
P0CJ61256 Cysteine-rich repeat secr no no 0.707 0.878 0.362 4e-38
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function desciption
 Score =  204 bits (519), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 140/236 (59%), Gaps = 11/236 (4%)

Query: 14  ILLQLVAL--TIAQVQD-TLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDTGFF 70
           I +Q++++   ++Q Q+   L+  CS  +G+FT  S Y++NLN+L S L+      TGF 
Sbjct: 15  IAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVP-STGFA 73

Query: 71  NISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSN 130
             S G   + VN + LCRGD     CRSC+ TA   L  RCPN K  I+WYDNC+++YS+
Sbjct: 74  ASSTGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSS 133

Query: 131 RFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDK---FATGNANTSA 187
             FFG ++F  RF +YN+KN SD STFN   K+LL  L  KA   D    FATG  N   
Sbjct: 134 TNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNI-- 191

Query: 188 GAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEI 243
             G   +Y LVQCT DL    C  CLN     LP CCDG+ GGRV+  SCNFRYEI
Sbjct: 192 --GKNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEI 245





Arabidopsis thaliana (taxid: 3702)
>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1 Back     alignment and function description
>sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|O49564|CRK27_ARATH Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=3 SV=2 Back     alignment and function description
>sp|O65405|CRK28_ARATH Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=3 SV=2 Back     alignment and function description
>sp|Q9LRL4|CRR24_ARATH Putative cysteine-rich repeat secretory protein 24 OS=Arabidopsis thaliana GN=CRRSP24 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRL8|CRR21_ARATH Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2 Back     alignment and function description
>sp|Q9SVI0|CRR41_ARATH Cysteine-rich repeat secretory protein 41 OS=Arabidopsis thaliana GN=CRRSP41 PE=2 SV=1 Back     alignment and function description
>sp|P0CJ61|CRR54_ARATH Cysteine-rich repeat secretory protein 54 OS=Arabidopsis thaliana GN=CRRSP54 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
224113937318 predicted protein [Populus trichocarpa] 0.871 0.871 0.528 5e-76
358347848 671 Cysteine-rich receptor-like protein kina 0.830 0.393 0.542 3e-75
358347946 552 Cysteine-rich receptor-like protein kina 0.830 0.478 0.542 3e-75
224107309257 predicted protein [Populus trichocarpa] 0.773 0.957 0.529 3e-71
147811956 839 hypothetical protein VITISV_019620 [Viti 0.770 0.292 0.561 5e-71
255555039295 DUF26 domain-containing protein 1 precur 0.786 0.847 0.532 1e-69
359496752 751 PREDICTED: cysteine-rich receptor-like p 0.889 0.376 0.510 9e-68
359497268 675 PREDICTED: cysteine-rich receptor-like p 0.770 0.362 0.533 2e-67
296088918 519 unnamed protein product [Vitis vinifera] 0.770 0.472 0.533 2e-67
356575767 675 PREDICTED: cysteine-rich receptor-like p 0.805 0.379 0.537 3e-67
>gi|224113937|ref|XP_002316619.1| predicted protein [Populus trichocarpa] gi|222859684|gb|EEE97231.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  290 bits (743), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 157/297 (52%), Positives = 190/297 (63%), Gaps = 20/297 (6%)

Query: 1   MTSSSLLLSFCTNILLQLVALTIAQVQDTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLT 60
           M +S LL  FC  I + L+ L+IAQ     LY  CS   GNFT +S Y++NLN+LLSS +
Sbjct: 5   MAASKLLFFFCP-IFIYLLVLSIAQADP--LYHFCSKT-GNFTNSSDYKSNLNNLLSSFS 60

Query: 61  SNTKIDTGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIW 120
           SNTKID GF+N SYGQN DKV A+ LCRGD KP++CRSCI  ++  L   CPNQKEA IW
Sbjct: 61  SNTKIDYGFYNDSYGQNNDKVTAISLCRGDKKPETCRSCITNSSQVLTQLCPNQKEAYIW 120

Query: 121 YDNCMLRYSNRFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGD---K 177
           YD+CMLRYSNRF  G+MEFGP F MYN+ N +D   F + +  LL +L   AA GD   K
Sbjct: 121 YDDCMLRYSNRFIVGSMEFGPHFWMYNVNNVTDEKEFYEKLNVLLGNLTNLAALGDSRRK 180

Query: 178 FATGNANTSAGAGSQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSC 237
           FATGNA T      Q +YALVQCTPDL+ QQC DCLN A +L+P CC  R GGRV++PSC
Sbjct: 181 FATGNATTE--NSQQKMYALVQCTPDLTRQQCSDCLNQAIKLIPTCCSKRQGGRVVSPSC 238

Query: 238 NFRYEIDRFYDVTADA-----------PTTSPSPSPSPASLPPPPTPTPTADQPPAS 283
           +FRYE D FY++               P    +     + LPPPP  T  A  P AS
Sbjct: 239 HFRYEKDPFYELVTTTPPPSPAPLSVLPPPPQATPAPLSVLPPPPQATADAVPPRAS 295




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347848|ref|XP_003637963.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355503898|gb|AES85101.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|358347946|ref|XP_003638011.1| Cysteine-rich receptor-like protein kinase, partial [Medicago truncatula] gi|355503946|gb|AES85149.1| Cysteine-rich receptor-like protein kinase, partial [Medicago truncatula] Back     alignment and taxonomy information
>gi|224107309|ref|XP_002333535.1| predicted protein [Populus trichocarpa] gi|118488745|gb|ABK96183.1| unknown [Populus trichocarpa] gi|222837111|gb|EEE75490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147811956|emb|CAN74851.1| hypothetical protein VITISV_019620 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255555039|ref|XP_002518557.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] gi|223542402|gb|EEF43944.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359496752|ref|XP_003635322.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497268|ref|XP_003635466.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088918|emb|CBI38478.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356575767|ref|XP_003556008.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.726 0.916 0.415 1.2e-44
TAIR|locus:2141762 665 CRK26 "cysteine-rich RLK (RECE 0.761 0.363 0.394 1.6e-43
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.729 0.343 0.373 3.3e-39
TAIR|locus:2127323 642 CRK27 "cysteine-rich RLK (RECE 0.754 0.373 0.396 3.1e-38
TAIR|locus:2141201 679 CRK29 "cysteine-rich RLK (RECE 0.663 0.310 0.401 9.7e-38
TAIR|locus:2095582 441 AT3G21960 [Arabidopsis thalian 0.742 0.535 0.34 1.2e-33
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.729 0.906 0.330 6.7e-33
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.757 0.934 0.338 8.5e-33
TAIR|locus:2065878255 AT2G31620 "AT2G31620" [Arabido 0.767 0.956 0.314 2.3e-32
TAIR|locus:2121636 659 CRK7 "cysteine-rich RLK (RECEP 0.751 0.362 0.336 7.1e-31
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 98/236 (41%), Positives = 127/236 (53%)

Query:    14 ILLQLVAL--TIAQVQDT-LLYSVCSSNQGNFTVNSTYQAXXXXXXXXXXXXXKIDTGFF 70
             I +Q++++   ++Q Q+   L+  CS  +G+FT  S Y++                TGF 
Sbjct:    15 IAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVP-STGFA 73

Query:    71 NISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSN 130
               S G   + VN + LCRGD     CRSC+ TA   L  RCPN K  I+WYDNC+++YS+
Sbjct:    74 ASSTGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSS 133

Query:   131 RFFFGNMEFGPRFSMYNLKNASDASTFNQAVKSLLDSLKIKAAPGDKFXXXXXXXXXXXX 190
               FFG ++F  RF +YN+KN SD STFN   K+LL  L  KA   D              
Sbjct:   134 TNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDN-QKLFATGEKNIG 192

Query:   191 XQTIYALVQCTPDLSEQQCIDCLNNATELLPKCCDGRLGGRVIAPSCNFRYEIDRF 246
                +Y LVQCT DL    C  CLN     LP CCDG+ GGRV+  SCNFRYEI  F
Sbjct:   193 KNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPF 248




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0002237 "response to molecule of bacterial origin" evidence=RCA
TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127323 CRK27 "cysteine-rich RLK (RECEPTOR-like protein kinase) 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141201 CRK29 "cysteine-rich RLK (RECEPTOR-like protein kinase) 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 2e-31
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 3e-25
PLN02744 539 PLN02744, PLN02744, dihydrolipoyllysine-residue ac 3e-04
pfam01690 460 pfam01690, PLRV_ORF5, Potato leaf roll virus readt 0.003
pfam01690 460 pfam01690, PLRV_ORF5, Potato leaf roll virus readt 0.003
PRK10856331 PRK10856, PRK10856, cytoskeletal protein RodZ; Pro 0.003
PRK12270 1228 PRK12270, kgd, alpha-ketoglutarate decarboxylase; 0.003
TIGR01348 546 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase 0.003
PRK11855 547 PRK11855, PRK11855, dihydrolipoamide acetyltransfe 0.004
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score =  113 bits (284), Expect = 2e-31
 Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 32  YSVCSSNQGNF--TVNSTYQANLNHLLSSLTSN--TKIDTGFFNISYGQNLDKVNAMGLC 87
           + +CSSN      T NST+++NLN LLSSL+SN  +    GF   + G   D V  +  C
Sbjct: 1   FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQC 60

Query: 88  RGDVKPDSCRSCIATATLALPTRCPNQKEAIIWYDNCMLRYSNRFF 133
           RGD+    CRSC+ATA   L   CPN+K   IWYD+C LRY +  F
Sbjct: 61  RGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
>gnl|CDD|215397 PLN02744, PLN02744, dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex Back     alignment and domain information
>gnl|CDD|216648 pfam01690, PLRV_ORF5, Potato leaf roll virus readthrough protein Back     alignment and domain information
>gnl|CDD|216648 pfam01690, PLRV_ORF5, Potato leaf roll virus readthrough protein Back     alignment and domain information
>gnl|CDD|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional Back     alignment and domain information
>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|233366 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form Back     alignment and domain information
>gnl|CDD|237000 PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 318
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.92
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.9
KOG1924 1102 consensus RhoA GTPase effector DIA/Diaphanous [Sig 84.42
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.92  E-value=1.4e-25  Score=181.33  Aligned_cols=102  Identities=43%  Similarity=0.845  Sum_probs=78.1

Q ss_pred             ccccC-CCCCcc-CCCChHHHHHHHHHHHhhcCCCCC--CCceeeccCCCCCeeEEEEeccCCCChhchHHHHHHHHHhc
Q 021048           32 YSVCS-SNQGNF-TVNSTYQANLNHLLSSLTSNTKID--TGFFNISYGQNLDKVNAMGLCRGDVKPDSCRSCIATATLAL  107 (318)
Q Consensus        32 ~~~C~-~~~~~~-~~~s~y~~NL~~ll~~L~s~a~~~--~gF~~~s~G~~~d~vygl~~CrgD~s~~~C~~Cl~~A~~~~  107 (318)
                      |+.|+ +..++| +.+++|++||+.||+.|..+++..  .+|+++..|.++++||||+||++|+++.+|..||+.|+.++
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            68899 432577 578889999999999999997653  47999988999999999999999999999999999999999


Q ss_pred             ccCCCCccceeEecceeEEEEccccc
Q 021048          108 PTRCPNQKEAIIWYDNCMLRYSNRFF  133 (318)
Q Consensus       108 ~~~C~~~~~a~i~~d~C~lRYs~~~F  133 (318)
                      .+.|+.+++|+||++.|+|||++++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999987



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-30
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.95
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.94
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.93
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.93
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.95  E-value=3e-28  Score=196.67  Aligned_cols=104  Identities=19%  Similarity=0.444  Sum_probs=94.1

Q ss_pred             ccccccccCCCCCccCCCChHHHHHHHHHHHhhcCCCCCC-CceeeccCC-CCCeeEEEEeccCCCChhchHHHHHHHHH
Q 021048           28 DTLLYSVCSSNQGNFTVNSTYQANLNHLLSSLTSNTKIDT-GFFNISYGQ-NLDKVNAMGLCRGDVKPDSCRSCIATATL  105 (318)
Q Consensus        28 ~~~~~~~C~~~~~~~~~~s~y~~NL~~ll~~L~s~a~~~~-gF~~~s~G~-~~d~vygl~~CrgD~s~~~C~~Cl~~A~~  105 (318)
                      +.++++.|++  ++|+++++|++||+.||++|+++++..+ +|++...|. ++++||||+|||+|+++++|+.||+.|+.
T Consensus         3 t~~v~~~Cn~--~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~   80 (108)
T 3a2e_A            3 TAFVSSACNT--QKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVN   80 (108)
T ss_dssp             CCEEEEEECS--SBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred             cceeeeecCC--CccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3689999976  4999999999999999999999986543 466666654 56999999999999999999999999999


Q ss_pred             hcccCCCCccceeEecceeEEEEccccc
Q 021048          106 ALPTRCPNQKEAIIWYDNCMLRYSNRFF  133 (318)
Q Consensus       106 ~~~~~C~~~~~a~i~~d~C~lRYs~~~F  133 (318)
                      ++.+.||++++|+||++.|+||||+++|
T Consensus        81 ~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           81 RIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             THHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999999987



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00