Citrus Sinensis ID: 021054

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHcccccccEEEEEEEcHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEEEccEEEEccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccccccccccccccccccccHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHccccEEEccccccccHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEccccHHHcccccEEEEcccccccccccccccccccccccEEEccEEEEEcccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccEEEEEHccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
msqwlhqrplhnplpnpyplsprnsmtfqfqrpmllvLNRTTLLVLLSLLVVLGVilpwtgtpgfmfpnatsslAKWRDYTLSQAASFVAKNGTIIVCAvsqpylpflnNWLISISRQKHQDQVLVIAEDYATLYKvngrwpghavlvppapdsqtahkfgsqgffnftsrrpchlLHILELGYnvmyndvdmvwlkdpfpylqgdhdvyftddmaavkpldhshdlpppgkkgrtyicscmiylrptdGAKLVMKKWIEELQaepwskakkandqpafnwalnktagQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Flexible Loop (DISEMBL)
msqwlhqrplhnplpnpyPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLdhshdlpppgkkGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Low Complexity Region (SEG)
MSQWLHQRplhnplpnpyplsprnSMTFQFQRPMllvlnrttllvllsllvvlgvilPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Disordered region (IsUnstruct)
**************************TFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPA****TAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKP*************GRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEII*
Disordered Region (DISOPRED)
***********************************LVLNRTTLLVLLSLLVVLGVILPWTGTPGF***************TLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Disordered Region (DISEMBL)
MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Disordered Region (DISPRO)
*************LP**************FQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLCCHCQNEIMMLVLCFLVLIEIIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	318	2.2.26 [Sep-21-2011]
Q54RP0	648	UDP-galactose:fucoside al	yes	no	0.493	0.242	0.227	4e-06

>sp|Q54RP0|AGTA_DICDI UDP-galactose:fucoside alpha-3-galactosyltransferase OS=Dictyostelium discoideum GN=agtA PE=1 SV=1

 Score = 52.4 bits (124), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)

Query: 77  WRDYTLSQAASF----VAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYA 132
           +RD TL+    F    + K+  I+ C   + Y  F     I   R   +D ++  +    
Sbjct: 22  FRDMTLNLLKCFEKLSIDKSRYILYCMDDKAYQFFAEFKGIECQRFS-RDDIINSSTSST 80

Query: 133 TLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVD 192
            L+  N       +       S+ A  +G  GF    + +P  +L +L+ GYNV++ D D
Sbjct: 81  QLFHDNNTNDNKGIY------SENAESYGDIGFRAICNEKPLVVLDVLKKGYNVLWTDTD 134

Query: 193 MVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPT 248
           +VW +DPF        ++F  D+       +  D+    ++    IC+   ++R  
Sbjct: 135 IVWKRDPF--------IHFYQDINQENQFTNDDDIDLYVQQDDDDICAGFYFIRSN 182

Specifically catalyzes the transfer of a galactosyl residue to the hydroxyproline-linked saccharide on Skp1 protein (fpaA/fpaB). Catalyzes the formation of a Gal-alpha-1,3-Fuc linkage, leading to Gal-Fuc-Gal-GlcNAc-HyPro143-Skp1.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 3EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
255541750	356	conserved hypothetical protein [Ricinus	0.902	0.806	0.810	1e-136
225454397	361	PREDICTED: UDP-galactose:fucoside alpha-	0.852	0.750	0.778	1e-125
449441404	355	PREDICTED: UDP-galactose:fucoside alpha-	0.889	0.797	0.779	1e-124
296085981	1331	unnamed protein product [Vitis vinifera]	0.861	0.205	0.776	1e-124
224127804	284	predicted protein [Populus trichocarpa]	0.893	1.0	0.783	1e-120
18411573	299	rhamnogalacturonan II specific xylosyltr	0.918	0.976	0.752	1e-119
13877593	299	unknown protein [Arabidopsis thaliana]	0.918	0.976	0.752	1e-119
297810037	356	hypothetical protein ARALYDRAFT_912111 [	0.886	0.792	0.761	1e-118
30678839	360	rhamnogalacturonan II specific xylosyltr	0.899	0.794	0.757	1e-117
147777556	309	hypothetical protein VITISV_003084 [Viti	0.748	0.770	0.823	1e-117

>gi|255541750|ref|XP_002511939.1| conserved hypothetical protein [Ricinus communis] gi|223549119|gb|EEF50608.1| conserved hypothetical protein [Ricinus communis]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/291 (81%), Positives = 258/291 (88%), Gaps = 4/291 (1%)

Query: 1   MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWT 60
           M+ +LHQRPLHN L +PYPLSPRNS   Q Q   + + +RT L+VL SLL++LGV +PWT
Sbjct: 1   MTSFLHQRPLHNSLSDPYPLSPRNSANSQRQ---ISIFSRTGLIVLFSLLLILGVFVPWT 57

Query: 61  GTPGFMFP-NATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQK 119
             P  +F     SS+AKWR YTL QAASFVA+NGT+IVCAVSQPYLPFLNNWLISI+RQK
Sbjct: 58  ELPNGIFSATKQSSVAKWRQYTLPQAASFVAQNGTVIVCAVSQPYLPFLNNWLISITRQK 117

Query: 120 HQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHI 179
           HQD+VLVIAEDYATLYKVN +WPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRP HLLH+
Sbjct: 118 HQDKVLVIAEDYATLYKVNEKWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPRHLLHL 177

Query: 180 LELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYIC 239
           LELGYNVMYNDVDMVWL DPF YL+G HDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYIC
Sbjct: 178 LELGYNVMYNDVDMVWLGDPFIYLEGKHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYIC 237

Query: 240 SCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           SCMI+L PT GAKLVMKKWI+ELQA+PWSKAKKANDQPAFNWALNKTAGQV
Sbjct: 238 SCMIFLHPTVGAKLVMKKWIKELQAQPWSKAKKANDQPAFNWALNKTAGQV 288

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454397|ref|XP_002279469.1| PREDICTED: UDP-galactose:fucoside alpha-3-galactosyltransferase [Vitis vinifera] gi|297745375|emb|CBI40455.3| unnamed protein product [Vitis vinifera]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/280 (77%), Positives = 250/280 (89%), Gaps = 9/280 (3%)

Query: 14  LPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPN---A 70
           L NP P+SPRN +   ++RP + +  RT LL+LL+L+VV+GV+LP   T     P+   +
Sbjct: 20  LSNPNPISPRNPL--DWRRP-ISIFGRTGLLILLTLMVVVGVLLP---TMKMRMPDGLLS 73

Query: 71  TSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAED 130
            +S++KWRDYTL+QAA FVAKNGT+IVCAVSQPYLPFLNNWLISI+RQKHQD+VLVIAED
Sbjct: 74  RASVSKWRDYTLAQAAEFVAKNGTVIVCAVSQPYLPFLNNWLISIARQKHQDKVLVIAED 133

Query: 131 YATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYND 190
           YATLY VN +WPGHAVLVPPAPD+QTAHKFGS GFFNFTSRRP HLL+ILELGYNVMYND
Sbjct: 134 YATLYTVNQKWPGHAVLVPPAPDAQTAHKFGSMGFFNFTSRRPRHLLNILELGYNVMYND 193

Query: 191 VDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDG 250
           VDMVWL DPFPYLQG HDVYFTDDMAAVKPL+HSHDLPPPGKKGRTYICSCMI++RPT+G
Sbjct: 194 VDMVWLADPFPYLQGKHDVYFTDDMAAVKPLNHSHDLPPPGKKGRTYICSCMIFMRPTNG 253

Query: 251 AKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           AKLVMKKWIEELQA+PWS+AKK+NDQPAFNWALN+TAG+V
Sbjct: 254 AKLVMKKWIEELQAQPWSRAKKSNDQPAFNWALNRTAGEV 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441404|ref|XP_004138472.1| PREDICTED: UDP-galactose:fucoside alpha-3-galactosyltransferase-like [Cucumis sativus] gi|449495244|ref|XP_004159776.1| PREDICTED: UDP-galactose:fucoside alpha-3-galactosyltransferase-like [Cucumis sativus]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/286 (77%), Positives = 251/286 (87%), Gaps = 3/286 (1%)

Query: 5   LHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPG 64
           LHQR  H+ L N YPLSPR+S + +    +   +N   LL LLSL+V+LGV LPW     
Sbjct: 5   LHQRSTHSSLANSYPLSPRSSSSSERSFSIFSPIN---LLALLSLIVILGVFLPWMNIQE 61

Query: 65  FMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQV 124
            +F ++  S +KWR+Y+L++AASFVA+NGT+IVCAVSQPYLPFLNNWLIS+SRQKH ++V
Sbjct: 62  SIFSSSKVSNSKWREYSLAEAASFVARNGTVIVCAVSQPYLPFLNNWLISLSRQKHHEKV 121

Query: 125 LVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGY 184
           LVIAEDYATLYKVN RWPGHAVLVPPAPD+QTAHKFGSQGFFNFTSRRP HLLHILELGY
Sbjct: 122 LVIAEDYATLYKVNERWPGHAVLVPPAPDAQTAHKFGSQGFFNFTSRRPRHLLHILELGY 181

Query: 185 NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIY 244
           NVMYNDVDMVWL DPFPYLQG+HDVYFTDDMAAVKPL HSHDLPPPGKKGRTYICSCMI+
Sbjct: 182 NVMYNDVDMVWLADPFPYLQGNHDVYFTDDMAAVKPLHHSHDLPPPGKKGRTYICSCMIF 241

Query: 245 LRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           LRPT GAKLVM+KWIEEL+A+PWSKAKKANDQPAFNWALNKTAG+V
Sbjct: 242 LRPTSGAKLVMRKWIEELKAQPWSKAKKANDQPAFNWALNKTAGEV 287

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085981|emb|CBI31422.3| unnamed protein product [Vitis vinifera]

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 215/277 (77%), Positives = 239/277 (86%), Gaps = 3/277 (1%)

Query: 14   LPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTPGFMFPNATSS 73
            L + YP+S R+S  +      + V  RT LLVLL+L+VVLGV+LP    P  +F  +  S
Sbjct: 990  LSDSYPISARSSPNWGRS---ISVFGRTGLLVLLTLVVVLGVVLPGMRAPDGLFGGSKVS 1046

Query: 74   LAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYAT 133
            ++KWR+YTL +A  F AKNGT+IVCAVSQPYLPFLNNWLISISRQKHQD+VLVIAEDYAT
Sbjct: 1047 VSKWREYTLEEAVPFAAKNGTLIVCAVSQPYLPFLNNWLISISRQKHQDKVLVIAEDYAT 1106

Query: 134  LYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDM 193
            LY VN RWPGHAVLVPPAPD+Q AHKFGSQGFFNFTSRRP HLL+ILELGYNVMYNDVDM
Sbjct: 1107 LYAVNDRWPGHAVLVPPAPDAQVAHKFGSQGFFNFTSRRPRHLLYILELGYNVMYNDVDM 1166

Query: 194  VWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKL 253
            VWL DPFPYLQGDHDVYFTDDM AVKPL+HSHDLPPPGKKGRTYICSCMI++RPTDGAKL
Sbjct: 1167 VWLADPFPYLQGDHDVYFTDDMTAVKPLNHSHDLPPPGKKGRTYICSCMIFMRPTDGAKL 1226

Query: 254  VMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
            VMK WIEELQA+PWS AKK+NDQPAFNWALN+TA QV
Sbjct: 1227 VMKDWIEELQAQPWSNAKKSNDQPAFNWALNRTAAQV 1263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127804|ref|XP_002320168.1| predicted protein [Populus trichocarpa] gi|222860941|gb|EEE98483.1| predicted protein [Populus trichocarpa]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/287 (78%), Positives = 250/287 (87%), Gaps = 3/287 (1%)

Query: 4   WLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGTP 63
           +LHQRPLH  L +PYPLS          +  + + +RT L+ +LSLL++LGVILPWTGTP
Sbjct: 1   FLHQRPLHGTLSDPYPLS---PRQSSSSQRQISLFSRTGLIAILSLLLILGVILPWTGTP 57

Query: 64  GFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQ 123
                   +SLAKW+ YTL QA +FVAKN T+IVCAVSQPYLPFL+NWLISISRQKHQD+
Sbjct: 58  SIFSATKPASLAKWQQYTLPQAVAFVAKNKTVIVCAVSQPYLPFLSNWLISISRQKHQDK 117

Query: 124 VLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELG 183
           VLVIAEDYATLY VN RWPGHAVLVPPAPDSQ+AHKFGSQGFFNFTSRRP HLLHILELG
Sbjct: 118 VLVIAEDYATLYNVNERWPGHAVLVPPAPDSQSAHKFGSQGFFNFTSRRPRHLLHILELG 177

Query: 184 YNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI 243
           Y+VMYNDVDMVWL DPF YL+G+HDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI
Sbjct: 178 YDVMYNDVDMVWLGDPFRYLEGNHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI 237

Query: 244 YLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           ++RPTDGAKLVMKKWIEEL+A+PWSK +KANDQPAFNWALNKTAGQV
Sbjct: 238 FMRPTDGAKLVMKKWIEELKAQPWSKTRKANDQPAFNWALNKTAGQV 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411573|ref|NP_567211.1| rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana] gi|57222150|gb|AAW38982.1| At4g01220 [Arabidopsis thaliana] gi|332656596|gb|AEE81996.1| rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/295 (75%), Positives = 250/295 (84%), Gaps = 3/295 (1%)

Query: 3   QWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGT 62
           ++LHQRP+ NP  NP+  S   S +    RP + +L+R  LL+LL+LLV+LGV LPW G+
Sbjct: 5   KFLHQRPIQNPFTNPFSSS-PLSTSSISNRP-ISLLSRNGLLLLLALLVILGVFLPWAGS 62

Query: 63  PGFMFPNATS-SLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQ 121
           P F  PN  S S +KWRDY+L QA  FVAKNGT+IVCAVS PYLPFLNNWLIS+SRQKHQ
Sbjct: 63  PLFPSPNKLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQ 122

Query: 122 DQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILE 181
           DQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HLL ILE
Sbjct: 123 DQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILE 182

Query: 182 LGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSC 241
           LGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A+KPLDHSHDLPPPGKKGRTYICSC
Sbjct: 183 LGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSC 242

Query: 242 MIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLC 296
           MI+LRPT+GAKL+MKKWIEEL+ +PWS+AKKANDQP FNWALNKTA QVCS  L 
Sbjct: 243 MIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVCSFFLV 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13877593|gb|AAK43874.1|AF370497_1 unknown protein [Arabidopsis thaliana]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/295 (75%), Positives = 250/295 (84%), Gaps = 3/295 (1%)

Query: 3   QWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGT 62
           ++LHQRP+ NP  NP+  S   S +    RP + +L+R  LL+LL+LLV+LGV LPW G+
Sbjct: 5   KFLHQRPIQNPFTNPFSSS-PLSTSSISNRP-ISLLSRNGLLLLLALLVILGVFLPWAGS 62

Query: 63  PGFMFPNATS-SLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQ 121
           P F  PN  S S +KWRDY+L QA  FVAKNGT+IVCAVS PYLPFLNNWLIS+SRQKHQ
Sbjct: 63  PLFPSPNKHSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQ 122

Query: 122 DQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILE 181
           DQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HLL ILE
Sbjct: 123 DQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILE 182

Query: 182 LGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSC 241
           LGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A+KPLDHSHDLPPPGKKGRTYICSC
Sbjct: 183 LGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSC 242

Query: 242 MIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCSVCLC 296
           MI+LRPT+GAKL+MKKWIEEL+ +PWS+AKKANDQP FNWALNKTA QVCS  L 
Sbjct: 243 MIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVCSFFLV 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810037|ref|XP_002872902.1| hypothetical protein ARALYDRAFT_912111 [Arabidopsis lyrata subsp. lyrata] gi|297318739|gb|EFH49161.1| hypothetical protein ARALYDRAFT_912111 [Arabidopsis lyrata subsp. lyrata]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/289 (76%), Positives = 246/289 (85%), Gaps = 7/289 (2%)

Query: 3   QWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGT 62
           ++LHQRP+ NP       S   S +    RP+ L L+R  LL+LL+LLV+LGV LPW G+
Sbjct: 5   KFLHQRPIQNPF-----SSSPLSNSSISNRPISL-LSRNGLLILLALLVILGVFLPWAGS 58

Query: 63  PGFMFPNA-TSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQ 121
           P F FPN  +SS +KWRDY+L QA  FVAKNGT+IVCAVS PYLPFLNNWLIS+SRQKHQ
Sbjct: 59  PLFPFPNRLSSSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQ 118

Query: 122 DQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILE 181
           DQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HLL ILE
Sbjct: 119 DQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILE 178

Query: 182 LGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSC 241
           LGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A+KPLDHSHDLPPPGKKGRTYICSC
Sbjct: 179 LGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSC 238

Query: 242 MIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           MI+LRPT+GAKL+MKKWIEELQ +PWS+AKKANDQP FNWALNKTA QV
Sbjct: 239 MIFLRPTNGAKLLMKKWIEELQTQPWSRAKKANDQPGFNWALNKTAHQV 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30678839|ref|NP_849279.1| rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana] gi|7267619|emb|CAB80931.1| hypothetical protein [Arabidopsis thaliana] gi|193885155|gb|ACF28391.1| At4g01220 [Arabidopsis thaliana] gi|332656595|gb|AEE81995.1| rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana]

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/289 (75%), Positives = 247/289 (85%), Gaps = 3/289 (1%)

Query: 3   QWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWTGT 62
           ++LHQRP+ NP  NP+  S   S +    RP + +L+R  LL+LL+LLV+LGV LPW G+
Sbjct: 5   KFLHQRPIQNPFTNPFSSS-PLSTSSISNRP-ISLLSRNGLLLLLALLVILGVFLPWAGS 62

Query: 63  PGFMFPNATS-SLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQ 121
           P F  PN  S S +KWRDY+L QA  FVAKNGT+IVCAVS PYLPFLNNWLIS+SRQKHQ
Sbjct: 63  PLFPSPNKLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQ 122

Query: 122 DQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILE 181
           DQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HLL ILE
Sbjct: 123 DQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILE 182

Query: 182 LGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSC 241
           LGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A+KPLDHSHDLPPPGKKGRTYICSC
Sbjct: 183 LGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSC 242

Query: 242 MIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
           MI+LRPT+GAKL+MKKWIEEL+ +PWS+AKKANDQP FNWALNKTA QV
Sbjct: 243 MIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQV 291

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777556|emb|CAN69309.1| hypothetical protein VITISV_003084 [Vitis vinifera]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/244 (82%), Positives = 225/244 (92%), Gaps = 6/244 (2%)

Query: 50  LVVLGVILPWTGTPGFMFPN---ATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLP 106
           +VV+GV+LP   T     P+   + +S++KWRDYTL+QAA FVAKNGT+IVCAVSQPYLP
Sbjct: 1   MVVVGVLLP---TMKMRMPDGLLSRASVSKWRDYTLAQAAEFVAKNGTVIVCAVSQPYLP 57

Query: 107 FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFF 166
           FLNNWLISI+RQKHQD+VLVIAEDYATLY VN +WPGHAVLVPPAPD+QTAHKFGS GFF
Sbjct: 58  FLNNWLISIARQKHQDKVLVIAEDYATLYTVNQKWPGHAVLVPPAPDAQTAHKFGSMGFF 117

Query: 167 NFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHD 226
           NFTSRRP HLL+ILELGYNVMYNDVDMVWL DPFPYLQG HDVYFTDDMAAVKPL+HSHD
Sbjct: 118 NFTSRRPRHLLNILELGYNVMYNDVDMVWLADPFPYLQGKHDVYFTDDMAAVKPLNHSHD 177

Query: 227 LPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT 286
           LPPPGKKGRTYICSCMI++RPT+GAKLVMKKWIEELQA+PWS+AKK+NDQPAFNWALN+T
Sbjct: 178 LPPPGKKGRTYICSCMIFMRPTNGAKLVMKKWIEELQAQPWSRAKKSNDQPAFNWALNRT 237

Query: 287 AGQV 290
           AG+V
Sbjct: 238 AGEV 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
TAIR|locus:2124968	360	MGP4 "male gametophyte defecti	0.732	0.647	0.824	3.4e-109
TAIR|locus:2133392	361	RGXT1 "rhamnogalacturonan xylo	0.732	0.645	0.759	3.1e-99
TAIR|locus:2133457	367	RGXT2 "rhamnogalacturonan xylo	0.732	0.634	0.719	3.7e-96
TAIR|locus:2027605	383	RGXT3 "RhamnoGalacturonan spec	0.732	0.608	0.717	1.8e-94
TAIR|locus:2058769	644	XEG113 "xyloglucanase 113" [Ar	0.588	0.290	0.285	4.9e-09
TAIR|locus:2026831	537	RAY1 "REDUCED ARABINOSE YARIV	0.386	0.229	0.289	1.7e-06
TAIR|locus:2119827	715	AT4G19970 "AT4G19970" [Arabido	0.547	0.243	0.252	5.6e-06
DICTYBASE|DDB_G0283005	648	agtA "UDP-Gal:fucoside alpha3-	0.411	0.202	0.263	0.00024
TAIR|locus:2156304	367	AT5G44820 "AT5G44820" [Arabido	0.415	0.359	0.244	0.00037
TAIR|locus:2037248	428	RRA2 "REDUCED RESIDUAL ARABINO	0.578	0.429	0.265	0.00062

TAIR|locus:2124968 MGP4 "male gametophyte defective 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
 Identities = 193/234 (82%), Positives = 210/234 (89%)

Query:    58 PWTGTPGFMFPNATS-SLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISIS 116
             PW G+P F  PN  S S +KWRDY+L QA  FVAKNGT+IVCAVS PYLPFLNNWLIS+S
Sbjct:    58 PWAGSPLFPSPNKLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVS 117

Query:   117 RQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHL 176
             RQKHQDQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HL
Sbjct:   118 RQKHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHL 177

Query:   177 LHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRT 236
             L ILELGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A+KPLDHSHDLPPPGKKGRT
Sbjct:   178 LEILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRT 237

Query:   237 YICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV 290
             YICSCMI+LRPT+GAKL+MKKWIEEL+ +PWS+AKKANDQP FNWALNKTA QV
Sbjct:   238 YICSCMIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQV 291

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0042285 "xylosyltransferase activity" evidence=IDA

GO:0048868 "pollen tube development" evidence=IMP

TAIR|locus:2133392 RGXT1 "rhamnogalacturonan xylosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
 Identities = 183/241 (75%), Positives = 207/241 (85%)

Query:    58 PWTGTPGFMFPNA-TSSLA-----KWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNW 111
             PW G+P F+FPN  +SSL+     KWRDYTL+QAA FVAKNGT+IVCAVS P+LPFLNNW
Sbjct:    52 PWPGSPLFLFPNRLSSSLSPSPQSKWRDYTLAQAARFVAKNGTVIVCAVSSPFLPFLNNW 111

Query:   112 LISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSR 171
             LIS+SRQKHQD+VLVIAEDY TLYKVN +WPGHAVL+PPA DS+TA  FGSQGFFNFT+R
Sbjct:   112 LISVSRQKHQDKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTAR 171

Query:   172 RPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPG 231
             RP HLL ILELGYNVMYNDVDMVWL+DPF YL+G HD YFTDDM  +KPL+HSHDLP P 
Sbjct:   172 RPQHLLQILELGYNVMYNDVDMVWLQDPFLYLEGSHDAYFTDDMPQIKPLNHSHDLPHPD 231

Query:   232 KKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAK--KANDQPAFNWALNKTAGQ 289
             + G TYICSCMIYLRPT+GAKL+MKKW EELQ++ WS++   KANDQPAFN ALNKTA Q
Sbjct:   232 RNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQ 291

Query:   290 V 290
             V
Sbjct:   292 V 292

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

TAIR|locus:2133457 RGXT2 "rhamnogalacturonan xylosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 177/246 (71%), Positives = 204/246 (82%)

Query:    58 PWTGTPGFMFPNATSS-----------LAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLP 106
             PW G+P  +FPN  SS            ++WR+YTL+QAA FVA NGT+IVCAVS P+LP
Sbjct:    53 PWPGSPLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVCAVSSPFLP 112

Query:   107 FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFF 166
             FLNNWLIS+SRQKHQ++VLVIAEDY TLYKVN +WPGHAVL+PPA DS+TA+ FGSQGFF
Sbjct:   113 FLNNWLISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAYSFGSQGFF 172

Query:   167 NFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHD 226
             NFT+RRP HLL ILELGYNVMYNDVDMVWL+DPF YL+G HD YFTDDM  +KPL+HSHD
Sbjct:   173 NFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFQYLEGSHDAYFTDDMPQIKPLNHSHD 232

Query:   227 LPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAK--KANDQPAFNWALN 284
             LP P + G TYICSCMIYLRPT+GAKL+MKKW EELQ++ WS++   KANDQPAFN ALN
Sbjct:   233 LPAPDQNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALN 292

Query:   285 KTAGQV 290
             KTA QV
Sbjct:   293 KTAHQV 298

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

TAIR|locus:2027605 RGXT3 "RhamnoGalacturonan specific Xylosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 175/244 (71%), Positives = 203/244 (83%)

Query:    58 PWTGTPGFMFPNATSS---------LAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFL 108
             P T +  FMFPN TSS         ++ WRDY+L+QA  FVAKN T+IVCAVS P+LPFL
Sbjct:    39 PLTKSSLFMFPNTTSSSLSPSSSLSVSDWRDYSLAQAVKFVAKNETVIVCAVSYPFLPFL 98

Query:   109 NNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNF 168
             NNWLISISRQKHQ++VLVIAEDYATLYKVN +WPGHAVL+PPA D Q+AHKFGSQGFFN 
Sbjct:    99 NNWLISISRQKHQEKVLVIAEDYATLYKVNEKWPGHAVLIPPALDPQSAHKFGSQGFFNL 158

Query:   169 TSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLP 228
             TSRRP HLL+ILELGYNVMYNDVDMVWL+DPF YLQG +D YF DDM A+KPL+HSHDLP
Sbjct:   159 TSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDYLQGSYDAYFMDDMIAIKPLNHSHDLP 218

Query:   229 PPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWS--KAKKANDQPAFNWALNKT 286
             P  + G TY+CSCMI+LR TDG KL+MK W+EE+QA+PW+  +AKK +DQPAFN AL+KT
Sbjct:   219 PLSRSGVTYVCSCMIFLRSTDGGKLLMKTWVEEIQAQPWNNTQAKKPHDQPAFNRALHKT 278

Query:   287 AGQV 290
             A QV
Sbjct:   279 ANQV 282

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

TAIR|locus:2058769 XEG113 "xyloglucanase 113" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 57/200 (28%), Positives = 87/200 (43%)

Query:    91 KNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPP 150
             K+  IIV   +  ++ F+  W+  ++       +LV A D   L  +   W G  V    
Sbjct:   130 KDNVIIVTFGNYAFMDFILTWVKHLT-DLDLSNILVGAMDTKLLEALY--WKGVPVFDMG 186

Query:   151 APDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQG--DHD 208
             +  S     +GS  F      +   +  +L  GY ++  D DMVWLK+P PYL    D D
Sbjct:   187 SHMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDAD 246

Query:   209 VYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWS 268
             V  + D      +D S D+    + G  Y    + + RPT+ AK + K+W E L A+   
Sbjct:   247 VLTSSDQVVPTVIDDSLDIWQ--QVGAAYNIG-IFHWRPTESAKKLAKEWKEILLADD-- 301

Query:   269 KAKKANDQPAFNWALNKTAG 288
                K  DQ  FN  + +  G
Sbjct:   302 ---KVWDQNGFNEIVRRQLG 318

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IMP

GO:0052325 "cell wall pectin biosynthetic process" evidence=IMP

GO:0052636 "arabinosyltransferase activity" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2026831 RAY1 "REDUCED ARABINOSE YARIV 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 37/128 (28%), Positives = 62/128 (48%)

Query:    80 YTLSQAASFVA-KNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVN 138
             + L      VA KN T+++      Y   L +W+  + R K  + ++   +D    + + 
Sbjct:   259 FDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLVCALDDETYQFSIL 318

Query:   139 GRWPGHAVLVPPAPDSQTAHK--FGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWL 196
                P      P AP + + +   FGS+ F   T  +   +L IL+LGYNV+ +DVD+ W 
Sbjct:   319 QGLP--VFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWF 376

Query:   197 KDPFPYLQ 204
             ++P P LQ
Sbjct:   377 RNPLPLLQ 384

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IDA

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2119827 AT4G19970 "AT4G19970" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
 Identities = 52/206 (25%), Positives = 89/206 (43%)

Query:    91 KNGTIIVCAVSQPYL-P------FLNNWLISISRQKHQDQVLVIAED---YATLYKVNGR 140
             ++ T+I+ A++Q +  P      F  ++ + I  ++    V+ +  D   Y    KV+  
Sbjct:   112 EDNTVIITALNQAWAEPNSTFDVFRESFKVGIETERLLKHVIAVCLDIKAYDQCLKVH-- 169

Query:   141 WPGHAVLVPPAPDSQTA--HKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKD 198
              P H  L+      Q +  ++F + G+     RR   L  ++ LGYN ++ D D++WL+D
Sbjct:   170 -P-HCYLINATDSDQLSGPNRFMTPGYLKLIWRRMDLLRQVIGLGYNFIFTDADILWLRD 227

Query:   199 PFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKW 258
             PFP    D D   T D    +P D         KK   ++ S   Y++  +      K W
Sbjct:   228 PFPRFFPDADFQITCDDYNGRPSD---------KKN--HVNSGFTYVKANNKTSKFYKYW 276

Query:   259 IEELQAEPWSKAKKANDQPAFNWALN 284
             I   +  P       +DQ  FN+  N
Sbjct:   277 IRSSRKFPGK-----HDQDVFNFIKN 297

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0283005 agtA "UDP-Gal:fucoside alpha3-galactosyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
 Identities = 38/144 (26%), Positives = 64/144 (44%)

Query:    77 WRDYTLSQAASF----VAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYA 132
             +RD TL+    F    + K+  I+ C   + Y  F     I   R   +D ++  +    
Sbjct:    22 FRDMTLNLLKCFEKLSIDKSRYILYCMDDKAYQFFAEFKGIECQRFS-RDDIINSSTSST 80

Query:   133 TLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVD 192
              L+  N       +       S+ A  +G  GF    + +P  +L +L+ GYNV++ D D
Sbjct:    81 QLFHDNNTNDNKGIY------SENAESYGDIGFRAICNEKPLVVLDVLKKGYNVLWTDTD 134

Query:   193 MVWLKDPFPYLQGD--HDVYFTDD 214
             +VW +DPF +   D   +  FT+D
Sbjct:   135 IVWKRDPFIHFYQDINQENQFTND 158

GO:0035250 "UDP-galactosyltransferase activity" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA;TAS

GO:0004381 "fucosylgalactoside 3-alpha-galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

TAIR|locus:2156304 AT5G44820 "AT5G44820" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
 Identities = 34/139 (24%), Positives = 58/139 (41%)

Query:    91 KNGTIIVCAVSQPYL-P------FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPG 143
             KN T+I+  ++Q +  P      FL ++ I    Q+    V+V+  D     + +     
Sbjct:   102 KNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIKAFERCSQLHTN 161

Query:   144 HAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYL 203
                +     D      + +  +      R   L  +LE+G+N ++ D D++WL+DPFP L
Sbjct:   162 CYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFTDADIMWLRDPFPRL 221

Query:   204 QGDHDVYFTDDMAAVKPLD 222
               D D     D     P D
Sbjct:   222 YPDGDFQMACDRFFGNPYD 240

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2037248 RRA2 "REDUCED RESIDUAL ARABINOSE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
 Identities = 53/200 (26%), Positives = 88/200 (44%)

Query:    82 LSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRW 141
             L++    VA N  IIV   +    P L   + S+ R   Q+ ++V  +D    +  +   
Sbjct:   146 LAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVKRVGIQNYLIVALDDSMESFCESKE- 204

Query:   142 PGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLH-ILELGYNVMYNDVDMVWLKDPF 200
                 V     PD +     G  G  +  S     +L   L+LGY+V+ +DVD+V+L++PF
Sbjct:   205 ---VVFYKRDPD-KAVDMVGKSGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPF 260

Query:   201 PYLQGDHDVY-FTD--DMAAVKPLDHSHDLPPPG-----KKGRTYIC-SCMIYLRPTDGA 251
              +L  D DV   +D  D       +   D P  G        R ++  S   YLRPT  +
Sbjct:   261 SHLHRDSDVESMSDGHDNNTAYGFNDVFDEPSMGWARYAHTMRIWVFNSGFFYLRPTIPS 320

Query:   252 KLVMKKWIEEL-QAEPWSKA 270
               ++ +  + L ++E W +A
Sbjct:   321 IDLLDRVADTLSKSEAWDQA 340


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      318       279   0.00081  115 3  11 22  0.43    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  253 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.40u 0.20s 22.60t   Elapsed:  00:00:01
  Total cpu time:  22.40u 0.20s 22.60t   Elapsed:  00:00:01
  Start:  Fri May 10 23:17:20 2013   End:  Fri May 10 23:17:21 2013

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0080147 "root hair cell development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	318
pfam03407	208	pfam03407, Nucleotid_trans, Nucleotide-diphospho-s	1e-36

>gnl|CDD|217539 pfam03407, Nucleotid_trans, Nucleotide-diphospho-sugar transferase

 Score =  130 bits (328), Expect = 1e-36
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 17/172 (9%)

Query: 119 KHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPD-SQTAHKFGSQGFFNFTSRRPCHLL 177
              + +LV+A D     +     P    L+    D S+    FGS+ +   + RR   LL
Sbjct: 1   GLLENLLVVALDEEAYKRCKELGPHICYLLSDVKDVSKKDFVFGSKTYLKMSWRRVRLLL 60

Query: 178 HILELGYNVMYNDVDMVWLKDPFPYLQ-GDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRT 236
            +LELGYN +++DVD+VWL++PFP L   D D+  + D       D              
Sbjct: 61  ELLELGYNFIFSDVDVVWLRNPFPLLYLPDADIIISSDNYDGTTADGLK----------N 110

Query: 237 YICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAG 288
           ++     Y+RPT+ +  + KKW E L   P       +DQ  FN+ L + A 
Sbjct: 111 WLNGGFFYVRPTNRSIALFKKWAERLLTYP-----GLHDQDVFNYLLREGAA 157

Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. Length = 208

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	318
PF03407	212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	99.97
cd02537	240	GT8_Glycogenin Glycogenin belongs the GT 8 family	98.42
PLN00176	333	galactinol synthase	98.38
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	98.02
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	97.74
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	97.67
cd06914	278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	97.47
PF05637	239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	96.97
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	96.72
COG1442	325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	96.61
PLN03182	429	xyloglucan 6-xylosyltransferase; Provisional	96.46
cd06430	304	GT8_like_2 GT8_like_2 represents a subfamily of GT	96.13
PF03314	222	DUF273: Protein of unknown function, DUF273; Inter	95.63
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	95.24
PLN03181	453	glycosyltransferase; Provisional	94.78
cd06432	248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	94.65
cd06429	257	GT8_like_1 GT8_like_1 represents a subfamily of GT	89.49
PF11051	271	Mannosyl_trans3: Mannosyltransferase putative; Int	84.11

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []

Probab=99.97  E-value=1.5e-30  Score=234.06  Aligned_cols=153  Identities=33%  Similarity=0.571  Sum_probs=131.2

Q ss_pred             CccEEEEEeCHHHHHHHhccCCCceEEcCC-CCCCccccccCchhHHHHHhhhHHHHHHHHHcCCeEEEeecceeeecCC
Q 021054          121 QDQVLVIAEDYATLYKVNGRWPGHAVLVPP-APDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDP  199 (318)
Q Consensus       121 ~~~vlVvAlD~~a~~~c~~~~pg~~v~~~~-~~d~~~~~~~gs~~f~~m~~~K~~~l~~lL~lGy~VL~sDvDVVWLrdP  199 (318)
                      .+|++|+|+|+++++.|++++++|..+... .........+++++|.+++|.|+.+++++|++||+|+++|+|+||+|||
T Consensus         3 ~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp   82 (212)
T PF03407_consen    3 IDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDP   82 (212)
T ss_pred             cccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCc
Confidence            489999999999999999998887776543 2233466789999999999999999999999999999999999999999


Q ss_pred             cCCc-CCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCcccCCCCCChHH
Q 021054          200 FPYL-QGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPA  278 (318)
Q Consensus       200 ~~~~-~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~a  278 (318)
                      ++++ ..++|+.+++|+..+.+.+          ..+..+|+||||+|+|++|++|+++|.+.+.+.+     +.+||.+
T Consensus        83 ~~~~~~~~~Di~~~~d~~~~~~~~----------~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~-----~~~DQ~~  147 (212)
T PF03407_consen   83 LPYFENPDADILFSSDGWDGTNSD----------RNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESP-----GCWDQQA  147 (212)
T ss_pred             HHhhccCCCceEEecCCCcccchh----------hcCCccccceEEEecCHHHHHHHHHHHHHHHhCC-----CcchHHH
Confidence            9999 7899999999976532211          1124579999999999999999999999998853     6789999


Q ss_pred             HHHHHhhcCC
Q 021054          279 FNWALNKTAG  288 (318)
Q Consensus       279 fN~ll~~~~~  288 (318)
                      ||+++++...
T Consensus       148 ~n~~l~~~~~  157 (212)
T PF03407_consen  148 FNELLREQAA  157 (212)
T ss_pred             HHHHHHhccc
Confidence            9999999773

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

Probab=98.42  E-value=6.9e-06  Score=75.84  Aligned_cols=159  Identities=16%  Similarity=0.157  Sum_probs=95.8

Q ss_pred             eCcchHHHHHHHHHHhhhcCCCccEEEEEe---CHHHHHHHhccCCCceEEcCCCCCCccccccCchhHHHHHhhhHHHH
Q 021054          100 VSQPYLPFLNNWLISISRQKHQDQVLVIAE---DYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHL  176 (318)
Q Consensus       100 ~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAl---D~~a~~~c~~~~pg~~v~~~~~~d~~~~~~~gs~~f~~m~~~K~~~l  176 (318)
                      +|.+|+.-+..-+.|+++.+-..+++|+..   .++..+.+++.  +..+...+..+...........+...+|.|..+.
T Consensus         8 ~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~--~~~~~~v~~i~~~~~~~~~~~~~~~~~~~kl~~~   85 (240)
T cd02537           8 TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEV--GWIVREVEPIDPPDSANLLKRPRFKDTYTKLRLW   85 (240)
T ss_pred             cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEecCccCCcchhhhccchHHHHHhHHHHhc
Confidence            566999988888999988654334544443   45555666665  3333221111111111111234556677786555


Q ss_pred             HHHHHcCC-eEEEeecceeeecCCcCCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecChHHHHHH
Q 021054          177 LHILELGY-NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGAKLVM  255 (318)
Q Consensus       177 ~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~~t~~f~  255 (318)
                      . +  .+| .|++.|+|++.++|+-+.|..+..+....|..               .  ..++|+|+|.++++..   ..
T Consensus        86 ~-l--~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~---------------~--~~~fNsGv~l~~~~~~---~~  142 (240)
T cd02537          86 N-L--TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCG---------------W--PDLFNSGVFVLKPSEE---TF  142 (240)
T ss_pred             c-c--cccceEEEEeCCeeEccCHHHHhCCCCceeeecccC---------------c--cccccceEEEEcCCHH---HH
Confidence            4 2  256 59999999999999877666422222222210               0  2479999999999764   34


Q ss_pred             HHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          256 KKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       256 ~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      +...+.+.+..   .....||.++|.++++.
T Consensus       143 ~~~~~~~~~~~---~~~~~DQdiLN~~~~~~  170 (240)
T cd02537         143 NDLLDALQDTP---SFDGGDQGLLNSYFSDR  170 (240)
T ss_pred             HHHHHHHhccC---CCCCCCHHHHHHHHcCC
Confidence            44445554431   13578999999999765

Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

>PLN00176 galactinol synthase

Probab=98.38  E-value=9.2e-06  Score=78.89  Aligned_cols=187  Identities=14%  Similarity=0.143  Sum_probs=107.3

Q ss_pred             CCeEEEE--EeCcchHHHHHHHHHHhhhcCCCccEEEEEeCH---HHHHHHhccCCCceEEcCCCCC-CccccccCchhH
Q 021054           92 NGTIIVC--AVSQPYLPFLNNWLISISRQKHQDQVLVIAEDY---ATLYKVNGRWPGHAVLVPPAPD-SQTAHKFGSQGF  165 (318)
Q Consensus        92 ~~tVIVt--~~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAlD~---~a~~~c~~~~pg~~v~~~~~~d-~~~~~~~gs~~f  165 (318)
                      .+...||  .+|..|..=+.....|+++.|-...++|+..++   +..+.+++.  ||.+...+... ......+. ..+
T Consensus        21 ~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~--g~~V~~V~~i~~~~~~~~~~-~~~   97 (333)
T PLN00176         21 AKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQ--GCIVREIEPVYPPENQTQFA-MAY   97 (333)
T ss_pred             CceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEecccCCcccccccc-cch
Confidence            4566666  468899998899999999988655666655554   444556655  66665322111 11111232 234


Q ss_pred             HHHHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCCc-eeeecccccccCCCC--------------CCCCC-
Q 021054          166 FNFTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDHD-VYFTDDMAAVKPLDH--------------SHDLP-  228 (318)
Q Consensus       166 ~~m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aD-v~~s~D~~~~~~~d~--------------~~~~p-  228 (318)
                      ..+++.|.++-. +.  .| .|+|.|+|++-++|--+.|.-..+ +....|++......+              ...+| 
T Consensus        98 ~~i~~tKl~iw~-l~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~  174 (333)
T PLN00176         98 YVINYSKLRIWE-FV--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPA  174 (333)
T ss_pred             hhhhhhhhhhcc-cc--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchh
Confidence            455666776433 33  46 599999999999998666653222 333334321100000              00111 


Q ss_pred             CCCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCc
Q 021054          229 PPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV  290 (318)
Q Consensus       229 ~~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~  290 (318)
                      ..|.....++|+|++.+.|+..+.   +...+.+...+   .....||.+||.++++....+
T Consensus       175 ~~g~~~~~yFNSGVlvinps~~~~---~~ll~~l~~~~---~~~f~DQD~LN~~F~~~~~~L  230 (333)
T PLN00176        175 ELGPPPPLYFNAGMFVFEPSLSTY---EDLLETLKITP---PTPFAEQDFLNMFFRDIYKPI  230 (333)
T ss_pred             hccCCCCCeEEeEEEEEEcCHHHH---HHHHHHHHhcC---CCCCCCHHHHHHHHcCcEEEC
Confidence            111111248999999999987663   33333443322   125689999999998644333

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=98.02  E-value=3.5e-05  Score=70.87  Aligned_cols=189  Identities=17%  Similarity=0.133  Sum_probs=105.7

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCC--CccEEEEEeC--HHHHHHHhccCC--Cce--EEcCCCCCCccccccCchhHHH
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKH--QDQVLVIAED--YATLYKVNGRWP--GHA--VLVPPAPDSQTAHKFGSQGFFN  167 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi--~~~vlVvAlD--~~a~~~c~~~~p--g~~--v~~~~~~d~~~~~~~gs~~f~~  167 (318)
                      |+.++|..|..-+..-+.|+.+..-  .-++.|++.|  ++..+.+++...  ++.  ...-...+.... ......|..
T Consensus         3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~-~~~~~~~~~   81 (248)
T cd04194           3 IVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFF-PATTDHISY   81 (248)
T ss_pred             EEEEecHhhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcC-CcccccccH
Confidence            7889999999988888888876332  2356666654  556666665421  322  221110000000 001223334


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccccccCCCCCCCCCCCCCCCCcccceeEE
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI  243 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~  243 (318)
                      ++..|..+ -+++. +| .|+|.|+|++.++|.-+.+..   +.-+....|.........  .....+..+..++|+|+|
T Consensus        82 ~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~--~~~~~~~~~~~yfNsGv~  157 (248)
T cd04194          82 ATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKR--KRRLGGYDDGSYFNSGVL  157 (248)
T ss_pred             HHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHH--HhhcCCCcccceeeecch
Confidence            44455543 44555 67 499999999999988766653   233444455432100000  000001123458999999


Q ss_pred             EEecChH-HHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCcc
Q 021054          244 YLRPTDG-AKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVC  291 (318)
Q Consensus       244 y~R~T~~-t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~~  291 (318)
                      .+..+.- ...+.+++.+.+...+  ......||.++|.++.+....++
T Consensus       158 l~nl~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~~~~~~~~L~  204 (248)
T cd04194         158 LINLKKWREENITEKLLELIKEYG--GRLIYPDQDILNAVLKDKILYLP  204 (248)
T ss_pred             heeHHHHHHhhhHHHHHHHHHhCC--CceeeCChHHHHHHHhCCeEEcC
Confidence            9987642 2345666666665432  12367999999999987644444

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.74  E-value=0.00012  Score=65.95  Aligned_cols=193  Identities=17%  Similarity=0.125  Sum_probs=101.4

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCC---CccEEEEEe--CHHHHHHHhccCCC---c-eEEcCCCCCCc--cccccCchh
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKH---QDQVLVIAE--DYATLYKVNGRWPG---H-AVLVPPAPDSQ--TAHKFGSQG  164 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi---~~~vlVvAl--D~~a~~~c~~~~pg---~-~v~~~~~~d~~--~~~~~gs~~  164 (318)
                      |+..+|..|..-+..-+.|+++..-   ..++.++..  .++..+.+++....   . .+.........  .........
T Consensus         2 i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
T PF01501_consen    2 IVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRH   81 (250)
T ss_dssp             EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTC
T ss_pred             EEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccc
Confidence            7889999999999999999888653   223433332  33444455443221   1 11111110000  011122234


Q ss_pred             HHHHHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccc-cccCCCCCCCCCCCCCCCCcccc
Q 021054          165 FFNFTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMA-AVKPLDHSHDLPPPGKKGRTYIC  239 (318)
Q Consensus       165 f~~m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~-~~~~~d~~~~~p~~g~~g~~~~N  239 (318)
                      +..++..|..+-. ++ .+| .|+|.|+|++.++|.-+.+.-   +.-+....|.. ...+..........+..+..++|
T Consensus        82 ~~~~~~~rl~i~~-ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fN  159 (250)
T PF01501_consen   82 FSPATFARLFIPD-LL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFN  159 (250)
T ss_dssp             GGGGGGGGGGHHH-HS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEE
T ss_pred             ccHHHHHHhhhHH-HH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCccccccc
Confidence            4556667774444 44 667 599999999999998776652   22233333300 00000000000001112246899


Q ss_pred             eeEEEEecChHHHH-HHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCcce
Q 021054          240 SCMIYLRPTDGAKL-VMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVCS  292 (318)
Q Consensus       240 tGf~y~R~T~~t~~-f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~~v  292 (318)
                      +|++.+.++.-... +.+.+...+....  ......||.++|.++......++.
T Consensus       160 sGv~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~DQ~~ln~~~~~~~~~L~~  211 (250)
T PF01501_consen  160 SGVMLFNPSKWRKENILQKLIEWLEQNG--MKLGFPDQDILNIVFYGNIKPLPC  211 (250)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHHHHHHHTT--TT-SSCHHHHHHHHHTTGEEEEEG
T ss_pred             CcEEEEeechhhhhhhhhhhhhhhhhcc--cccCcCchHHHhhhccceeEEECc
Confidence            99999998877654 5555555544431  123579999999999865554444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=97.67  E-value=0.002  Score=59.45  Aligned_cols=183  Identities=16%  Similarity=0.162  Sum_probs=98.5

Q ss_pred             EEEEEeCcchHHHHHHHHHHhhhcCC-CccEEEEEeC--HHHHHHHhccC--CCce-EEcC-CCCCCccccccCchhHHH
Q 021054           95 IIVCAVSQPYLPFLNNWLISISRQKH-QDQVLVIAED--YATLYKVNGRW--PGHA-VLVP-PAPDSQTAHKFGSQGFFN  167 (318)
Q Consensus        95 VIVt~~N~~y~~~l~Nwl~sl~~~gi-~~~vlVvAlD--~~a~~~c~~~~--pg~~-v~~~-~~~d~~~~~~~gs~~f~~  167 (318)
                      ++++.++..|+.-+.--+.|+.+..- .-++.|++.|  ++..+.+.+..  .++. .+.+ +...... .....+.+..
T Consensus         3 i~~~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~   81 (246)
T cd00505           3 IVIVATGDEYLRGAIVLMKSVLRHRTKPLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVD-SEHLKRPIKI   81 (246)
T ss_pred             EEEEecCcchhHHHHHHHHHHHHhCCCCeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcch-hhhhcCcccc
Confidence            45556666999988888888766432 2456666543  33444444431  1232 1221 1111100 0000112223


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccccc---cCCCCCCCCCCCCCCCCcccce
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAV---KPLDHSHDLPPPGKKGRTYICS  240 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~---~~~d~~~~~p~~g~~g~~~~Nt  240 (318)
                      .+..|.. +-+++. ++ .|+|.|+|++-++|.-+.+.-   +.-+.+..|....   .........    ..+..++|+
T Consensus        82 ~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~----~~~~~yfNs  155 (246)
T cd00505          82 VTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSH----LAGPDYFNS  155 (246)
T ss_pred             ceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCC----CCCCCceee
Confidence            3444553 445677 78 599999999999988766653   2334444443210   000000001    122458999


Q ss_pred             eEEEEecChHH-HHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          241 CMIYLRPTDGA-KLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       241 Gf~y~R~T~~t-~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      |+|.+..+.-. ..+.+...+......  ......||+++|.++.+.
T Consensus       156 GVmlinl~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~~~~~  200 (246)
T cd00505         156 GVFVVNLSKERRNQLLKVALEKWLQSL--SSLSGGDQDLLNTFFKQV  200 (246)
T ss_pred             eeEEEechHHHHHHHHHHHHHHHHhhc--ccCccCCcHHHHHHHhcC
Confidence            99999998874 455555544333210  123679999999999876

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family

Probab=97.47  E-value=0.0029  Score=60.21  Aligned_cols=155  Identities=12%  Similarity=0.078  Sum_probs=88.3

Q ss_pred             eCcchHHHHHHHHHHhhhcCCCccEEEEEeCH---HHHHHHhc-----cCCCceEEcCCCCCCccccccCchhHHHHHhh
Q 021054          100 VSQPYLPFLNNWLISISRQKHQDQVLVIAEDY---ATLYKVNG-----RWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSR  171 (318)
Q Consensus       100 ~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAlD~---~a~~~c~~-----~~pg~~v~~~~~~d~~~~~~~gs~~f~~m~~~  171 (318)
                      +|.+|+.-+.....++++.|-....+++.-+.   .+.+...+     ..-++.+...+......    +++.|.. ++.
T Consensus         8 Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~----~~~~~~~-~~t   82 (278)
T cd06914           8 TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG----GDAYWAK-SLT   82 (278)
T ss_pred             cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC----CCccHHH-HHH
Confidence            48999998888899999988744444443222   22111110     11133332211111111    2223322 355


Q ss_pred             hHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCC-CceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecCh
Q 021054          172 RPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGD-HDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTD  249 (318)
Q Consensus       172 K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~-aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~  249 (318)
                      |..+-..   ..| .|+|.|+|++-++|.-+.|.-+ ..-+.+.+.                   +.++|+|+|.+.|+.
T Consensus        83 Kl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~-------------------~~~FNSGvmvi~ps~  140 (278)
T cd06914          83 KLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRA-------------------YWKFASHLMVIKPSK  140 (278)
T ss_pred             HHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeecC-------------------cceecceeEEEeCCH
Confidence            6555442   457 5999999999999876555432 111111110                   127999999999999


Q ss_pred             HHH-HHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          250 GAK-LVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       250 ~t~-~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      .+- ++++...+....     ..+..||.++|.++.+.
T Consensus       141 ~~~~~l~~~~~~~~~~-----~~~~~DQdiLN~~~~~~  173 (278)
T cd06914         141 EAFKELMTEILPAYLN-----KKNEYDMDLINEEFYNS  173 (278)
T ss_pred             HHHHHHHHHHHHhccc-----CCCCCChHHHHHHHhCC
Confidence            774 444444444322     13678999999999876

N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif

Probab=96.97  E-value=0.00072  Score=62.79  Aligned_cols=115  Identities=14%  Similarity=0.092  Sum_probs=22.0

Q ss_pred             HHhhhHHHHHHHHHcC---CeEEEeecceeeecCC-cC---CcCC--CC------ceee-eccccccc----CCCCCCCC
Q 021054          168 FTSRRPCHLLHILELG---YNVMYNDVDMVWLKDP-FP---YLQG--DH------DVYF-TDDMAAVK----PLDHSHDL  227 (318)
Q Consensus       168 m~~~K~~~l~~lL~lG---y~VL~sDvDVVWLrdP-~~---~~~~--~a------Dv~~-s~D~~~~~----~~d~~~~~  227 (318)
                      ..|.|+.++++.+..=   ==|++.|.|++.. || ++   ++..  .-      |+-+ .-+.....    ..+..+-.
T Consensus        59 ~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~-n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li  137 (239)
T PF05637_consen   59 GSWAKIPALRAAMKKYPEAEWVWWLDSDALIM-NPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLI  137 (239)
T ss_dssp             HHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE-------------------------------------------------
T ss_pred             hhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEE-ecccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4699999999999652   3489999999985 44 22   2211  00      1110 00100000    00000001


Q ss_pred             CCCCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          228 PPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       228 p~~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      ..   .....+|+|+|++|.++-|+.|++.|.+.+............||.||-.+++..
T Consensus       138 ~t---~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~  193 (239)
T PF05637_consen  138 IT---QDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWH  193 (239)
T ss_dssp             -----------------------------------------------------------
T ss_pred             cc---cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            11   123469999999999999999999999876543211112367999999888754

This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=96.72  E-value=0.016  Score=55.15  Aligned_cols=185  Identities=14%  Similarity=0.081  Sum_probs=86.6

Q ss_pred             EEEEEeCcchHHHHHHHHHHhhhc-CCCccEEEEEeC--HHHHHHHhcc--CCCceEE-cCCCCCCccccc-cCchhHHH
Q 021054           95 IIVCAVSQPYLPFLNNWLISISRQ-KHQDQVLVIAED--YATLYKVNGR--WPGHAVL-VPPAPDSQTAHK-FGSQGFFN  167 (318)
Q Consensus        95 VIVt~~N~~y~~~l~Nwl~sl~~~-gi~~~vlVvAlD--~~a~~~c~~~--~pg~~v~-~~~~~d~~~~~~-~gs~~f~~  167 (318)
                      +||++. .+|.+.+.+-+.|+-.- ...-++-|++.+  ++..+.+.+.  ..+|.+. ..-. +...... ..+..|-.
T Consensus         4 ~iv~~~-~~y~~~~~~~i~Sil~n~~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~-~~~~~~~~~~~~~~s~   81 (280)
T cd06431           4 AIVCAG-YNASRDVVTLVKSVLFYRRNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAE-ELKSRVSWIPNKHYSG   81 (280)
T ss_pred             EEEEcc-CCcHHHHHHHHHHHHHcCCCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhH-HhhhhhccCcccchhh
Confidence            566666 89988888888886442 211244444433  3444445433  1234332 2110 0000000 01111111


Q ss_pred             H-HhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC-----CCceeee-cccc---cccCCCCCCCCCCCCCCCCc
Q 021054          168 F-TSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG-----DHDVYFT-DDMA---AVKPLDHSHDLPPPGKKGRT  236 (318)
Q Consensus       168 m-~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~-----~aDv~~s-~D~~---~~~~~d~~~~~p~~g~~g~~  236 (318)
                      . +..|. ++-++|..-+ .||+.|+|+|...|..+.+.-     +.-+... .|..   ...........+.    .+.
T Consensus        82 ~y~y~RL-~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~----~~~  156 (280)
T cd06431          82 IYGLMKL-VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPA----LGR  156 (280)
T ss_pred             HHHHHHH-HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcc----ccc
Confidence            1 11233 3455665445 699999999999998765532     1112222 2221   0000000011111    124


Q ss_pred             ccceeEEEEecCh-HHHHHHHHHHHHHHcCCc-ccCCCCCChHHHHHHHhhc
Q 021054          237 YICSCMIYLRPTD-GAKLVMKKWIEELQAEPW-SKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       237 ~~NtGf~y~R~T~-~t~~f~~~W~~~l~~~p~-~~~~~~~DQ~afN~ll~~~  286 (318)
                      ++|+|+|.+--.. +-..+.++|.....+... ..+.+..||+++|.++.+.
T Consensus       157 yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~  208 (280)
T cd06431         157 GFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQN  208 (280)
T ss_pred             ceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCC
Confidence            8999999984322 111233334322211100 0123679999999999775

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.61  E-value=0.009  Score=58.07  Aligned_cols=190  Identities=16%  Similarity=0.084  Sum_probs=100.2

Q ss_pred             EEEEeCcchHHHHHHH----HHHhhhcCCCccEEEEEeCHHHHHHHhccC-C-Cce-EEcCCCCCCcccccc--CchhHH
Q 021054           96 IVCAVSQPYLPFLNNW----LISISRQKHQDQVLVIAEDYATLYKVNGRW-P-GHA-VLVPPAPDSQTAHKF--GSQGFF  166 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nw----l~sl~~~gi~~~vlVvAlD~~a~~~c~~~~-p-g~~-v~~~~~~d~~~~~~~--gs~~f~  166 (318)
                      |+-.+|.+|+.=+..-    +++.++..+.=|+++...+++-.+.+++.- | ++. .+..  .|.+.-..+  .++.|.
T Consensus         5 Iv~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~--id~~~~~~~~~~~~~~s   82 (325)
T COG1442           5 IAFAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEV--IDIEPFLDYPPFTKRFS   82 (325)
T ss_pred             EEEEcccccchhHHHHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEE--EechhhhcccccccchH
Confidence            6778899998744444    444453344447888888898888887652 1 111 1110  011111111  356677


Q ss_pred             HHHhhhHHHHHHHHHcCCeEEEeecceeeecCCcCCcCC---CCceeeecccccccCCCCCCCCCCCCCCCCcccceeEE
Q 021054          167 NFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI  243 (318)
Q Consensus       167 ~m~~~K~~~l~~lL~lGy~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~  243 (318)
                      .|+..|.- +-++....=.+++.|+|+|..+|=-+.|.-   ++=+.+..|......... ......+...+.++|+|++
T Consensus        83 ~~v~~R~f-iadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~-~~~~~~~~~~~~yFNaG~l  160 (325)
T COG1442          83 KMVLVRYF-LADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEG-ALRLEKGDLEGSYFNAGVL  160 (325)
T ss_pred             HHHHHHHH-HHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhh-hhHhhhcccccccCcccee
Confidence            77777763 445666666799999999999976544432   222222333321000000 0000111223568999999


Q ss_pred             EEecC-hHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCcc
Q 021054          244 YLRPT-DGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVC  291 (318)
Q Consensus       244 y~R~T-~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~~  291 (318)
                      ++--- =+-..+.+.-++.+.+.  .++-...||.++|.+++...-.++
T Consensus       161 linl~~W~~~~i~~k~i~~~~~~--~~~~~~~DQdiLN~i~~~~~~~L~  207 (325)
T COG1442         161 LINLKLWREENIFEKLIELLKDK--ENDLLYPDQDILNMIFEDRVLELP  207 (325)
T ss_pred             eehHHHHHHhhhHHHHHHHHhcc--ccccCCccccHHHHHHHhhhhccC
Confidence            97211 11112222222222221  123467899999999987654443

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional

Probab=96.46  E-value=0.016  Score=57.68  Aligned_cols=115  Identities=12%  Similarity=0.020  Sum_probs=73.6

Q ss_pred             HhhhHHHHHHHHHcCC---eEEEeecceeeecCCcCCc-C--CCCceee-ecccccccCCCCCCCCCCCCCCCCccccee
Q 021054          169 TSRRPCHLLHILELGY---NVMYNDVDMVWLKDPFPYL-Q--GDHDVYF-TDDMAAVKPLDHSHDLPPPGKKGRTYICSC  241 (318)
Q Consensus       169 ~~~K~~~l~~lL~lGy---~VL~sDvDVVWLrdP~~~~-~--~~aDv~~-s~D~~~~~~~d~~~~~p~~g~~g~~~~NtG  241 (318)
                      .|.|+-++++++..--   -+++.|.|.+.+--++..- .  .++++++ .-+...         +....+   ..+|+|
T Consensus       181 ~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~~NlVihg~~~~l---------~~~kdW---~GLNtG  248 (429)
T PLN03182        181 FWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYNLVIHGWDELV---------YDQKSW---IGLNTG  248 (429)
T ss_pred             chhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCCcCeeeccchhhh---------eecccc---Ccccee
Confidence            5899999999987642   3799999999975333321 1  1333322 111100         000011   358999


Q ss_pred             EEEEecChHHHHHHHHHHHHHHcCCccc--------------CCCCCChHHHHHHHhhc--CCCcceeee
Q 021054          242 MIYLRPTDGAKLVMKKWIEELQAEPWSK--------------AKKANDQPAFNWALNKT--AGQVCSVCL  295 (318)
Q Consensus       242 f~y~R~T~~t~~f~~~W~~~l~~~p~~~--------------~~~~~DQ~afN~ll~~~--~~~~~v~~~  295 (318)
                      .|++|.++-+..|++.|..+-.+.|.+.              ....+||.|+-.++...  .++-.+|.-
T Consensus       249 sFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le  318 (429)
T PLN03182        249 SFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLE  318 (429)
T ss_pred             eEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEe
Confidence            9999999999999999987654332211              34689999999998654  455555543

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function

Probab=96.13  E-value=0.14  Score=49.46  Aligned_cols=105  Identities=13%  Similarity=0.087  Sum_probs=57.1

Q ss_pred             HHHHHHcCC-eEEEeecceeeecCCcCCcCC-----CCceeee-ccccc--ccCCCCCCCCCCCCCCCCcccceeEEEEe
Q 021054          176 LLHILELGY-NVMYNDVDMVWLKDPFPYLQG-----DHDVYFT-DDMAA--VKPLDHSHDLPPPGKKGRTYICSCMIYLR  246 (318)
Q Consensus       176 l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~-----~aDv~~s-~D~~~--~~~~d~~~~~p~~g~~g~~~~NtGf~y~R  246 (318)
                      +-++|. -+ .||+.|+|++.++|.-+.+.-     +.-+... .|...  .+.+......+..   |...+|+|+|++-
T Consensus        90 ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~---~~~gFNSGVmLmN  165 (304)
T cd06430          90 LPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYY---GKTGVNSGVMLMN  165 (304)
T ss_pred             HHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcc---cccccccceeeee
Confidence            344555 44 699999999999887554432     1112222 22210  0000000011111   2235999999985


Q ss_pred             cChH------------HHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          247 PTDG------------AKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       247 ~T~~------------t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      =+.=            ...+-+.|.+.+.+..  ..-...||++||.++.+.
T Consensus       166 L~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~DQDiLN~v~~~~  215 (304)
T cd06430         166 LTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK--LKITWGDQDLINIIFHHN  215 (304)
T ss_pred             HHHHHhhhcccccchhhhhHHHHHHHHHHhcc--cCCCCCCHHHHHHHHcCC
Confidence            4331            1334556666665542  123579999999999874

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function

Probab=95.63  E-value=0.064  Score=49.05  Aligned_cols=101  Identities=20%  Similarity=0.223  Sum_probs=77.6

Q ss_pred             HHHhhhHHHHHHHHHcCCeEEEeecceeeecCCc----CCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeE
Q 021054          167 NFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPF----PYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCM  242 (318)
Q Consensus       167 ~m~~~K~~~l~~lL~lGy~VL~sDvDVVWLrdP~----~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf  242 (318)
                      ..+.+|--++.++|..==-||+.|+||.= -||-    +++..++|+.+-+..++                  ..+.+|-
T Consensus        26 d~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fydR~~n------------------~Ei~ags   86 (222)
T PF03314_consen   26 DKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFYDRFFN------------------WEIAAGS   86 (222)
T ss_pred             hHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEEecccc------------------hhhhhcc
Confidence            34667888889999865569999999986 6885    35566899998855432                  2578899


Q ss_pred             EEEecChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCC
Q 021054          243 IYLRPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAG  288 (318)
Q Consensus       243 ~y~R~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~  288 (318)
                      |++|.|+.++.|++.|.+.-.+.|-  .-...|-.|+...+.+..-
T Consensus        87 YlvkNT~~~~~fl~~~a~~E~~lP~--sfhGtDNGAlH~~L~e~l~  130 (222)
T PF03314_consen   87 YLVKNTEYSRDFLKEWADYEFKLPN--SFHGTDNGALHIFLAEKLF  130 (222)
T ss_pred             ceeeCCHHHHHHHHHHhhhCccCCC--ccccCccHHHHHHHHHHhC
Confidence            9999999999999999988666552  2357888899888876443

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=95.24  E-value=0.092  Score=51.11  Aligned_cols=191  Identities=14%  Similarity=0.054  Sum_probs=91.3

Q ss_pred             eEEEEEeCcchHHHHHHHHHHhhhc--CCCccEEEEE--eCHHHHHHHhcc---CCC-ceEEc-CC-C-CCCccccccCc
Q 021054           94 TIIVCAVSQPYLPFLNNWLISISRQ--KHQDQVLVIA--EDYATLYKVNGR---WPG-HAVLV-PP-A-PDSQTAHKFGS  162 (318)
Q Consensus        94 tVIVt~~N~~y~~~l~Nwl~sl~~~--gi~~~vlVvA--lD~~a~~~c~~~---~pg-~~v~~-~~-~-~d~~~~~~~gs  162 (318)
                      .=|+..+|.+|+.-+..-+.|+-..  +..-++-|++  .+++..+.+++.   ++. +.... +. . .+......|. 
T Consensus        26 i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~~~~~~~s-  104 (334)
T PRK15171         26 LDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSLPSTKNWT-  104 (334)
T ss_pred             eeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCCcccCcCC-
Confidence            4489999999999877777776432  2111344443  344444444332   221 22111 11 0 0111111222 


Q ss_pred             hhHHHHHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCC--c-eeee-cccccccCCCCCCCCCCCCCCCCcc
Q 021054          163 QGFFNFTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDH--D-VYFT-DDMAAVKPLDHSHDLPPPGKKGRTY  237 (318)
Q Consensus       163 ~~f~~m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~a--D-v~~s-~D~~~~~~~d~~~~~p~~g~~g~~~  237 (318)
                          ..+..|. ++-++|...+ .||+.|+|++-.+|--+.+.-+-  + +... .|............+...+ .+..+
T Consensus       105 ----~atY~Rl-~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~-~~~~Y  178 (334)
T PRK15171        105 ----YATYFRF-IIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPG-LASGY  178 (334)
T ss_pred             ----HHHHHHH-HHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCcc-ccccc
Confidence                2233343 2335554456 59999999999988766554321  1 2222 2321000000000000001 11348


Q ss_pred             cceeEEEEecCh-HHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCcc
Q 021054          238 ICSCMIYLRPTD-GAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVC  291 (318)
Q Consensus       238 ~NtGf~y~R~T~-~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~~  291 (318)
                      +|+|++++--.. +-..+-+++.+.+........-...||++||.++++....++
T Consensus       179 FNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~  233 (334)
T PRK15171        179 FNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFID  233 (334)
T ss_pred             eecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECC
Confidence            999999984322 112233333443332100011246899999999987544443

>PLN03181 glycosyltransferase; Provisional

Probab=94.78  E-value=0.13  Score=51.53  Aligned_cols=107  Identities=17%  Similarity=0.060  Sum_probs=67.5

Q ss_pred             HHhhhHHHHHHHHHcC--C-eEEEeecceeeecCCcCCcC----CCCceeeecccccccCCCCCCCCCCCCCCCCcccce
Q 021054          168 FTSRRPCHLLHILELG--Y-NVMYNDVDMVWLKDPFPYLQ----GDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICS  240 (318)
Q Consensus       168 m~~~K~~~l~~lL~lG--y-~VL~sDvDVVWLrdP~~~~~----~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~Nt  240 (318)
                      ..|.|+-+++..+..=  . -+++.|.|++.+ ||-..+.    .+..+++-  ++..    .  .+....+   ..+|+
T Consensus       181 ~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~~~NLvvh--g~p~----~--vy~~qdw---~GlN~  248 (453)
T PLN03181        181 SYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYRDHNLVVH--GWPK----L--IYEKRSW---TALNA  248 (453)
T ss_pred             hhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcCCcccccc--CCcc----c--ccccccc---cccce
Confidence            3688999999877652  2 489999999986 6632221    12222211  1100    0  0001111   35999


Q ss_pred             eEEEEecChHHHHHHHHHHHHHHcCCccc--------------CCCCCChHHHHHHHhhc
Q 021054          241 CMIYLRPTDGAKLVMKKWIEELQAEPWSK--------------AKKANDQPAFNWALNKT  286 (318)
Q Consensus       241 Gf~y~R~T~~t~~f~~~W~~~l~~~p~~~--------------~~~~~DQ~afN~ll~~~  286 (318)
                      |.|++|.++-+..|++.|..+-.+.|...              ....+||-++--++-.+
T Consensus       249 GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~  308 (453)
T PLN03181        249 GVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKH  308 (453)
T ss_pred             eeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhc
Confidence            99999999999999999997543333211              34689999998887543

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family

Probab=94.65  E-value=0.76  Score=42.84  Aligned_cols=107  Identities=17%  Similarity=0.170  Sum_probs=52.3

Q ss_pred             HHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccccccCCCC-C---CCCCCCCCCCCcccceeEEEE---
Q 021054          177 LHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAVKPLDH-S---HDLPPPGKKGRTYICSCMIYL---  245 (318)
Q Consensus       177 ~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~~~~d~-~---~~~p~~g~~g~~~~NtGf~y~---  245 (318)
                      ..+|...+ .|+|.|+|++...|=-+.+.-   ++=+.+..|+........ .   .+.-..+-.++.++|+|+|++   
T Consensus        89 ~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmliNL~  168 (248)
T cd06432          89 DVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVVDLK  168 (248)
T ss_pred             HHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEEeHH
Confidence            34787767 699999999997654333322   221222223211000000 0   000000102345899999998   


Q ss_pred             --ecChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          246 --RPTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       246 --R~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                        |...-+.++.+. .+.+...+  ..-...||+++|.++.+.
T Consensus       169 ~wR~~~i~~~~~~~-~~~l~~~~--~~l~~~DQDiLN~v~~~~  208 (248)
T cd06432         169 RFRRIAAGDRLRGQ-YQQLSQDP--NSLANLDQDLPNNMQHQV  208 (248)
T ss_pred             HHHHHhHHHHHHHH-HHHHhcCC--CccccCCchhhHHHhccC
Confidence              333322222221 11222221  112568999999999663

C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function

Probab=89.49  E-value=0.59  Score=43.95  Aligned_cols=83  Identities=18%  Similarity=0.069  Sum_probs=48.7

Q ss_pred             eEEEeecceeeecCCcCCcCCC---CceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEe-----cChHHHHHHH
Q 021054          185 NVMYNDVDMVWLKDPFPYLQGD---HDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLR-----PTDGAKLVMK  256 (318)
Q Consensus       185 ~VL~sDvDVVWLrdP~~~~~~~---aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R-----~T~~t~~f~~  256 (318)
                      .|+|.|+|++-.+|=-+.+..+   .-+.+..|                      ++|+|++++-     ...-+.+++ 
T Consensus       116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d----------------------yfNsGV~linl~~wr~~~i~~~~~-  172 (257)
T cd06429         116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET----------------------SWNPGVNVVNLTEWRRQNVTETYE-  172 (257)
T ss_pred             eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh----------------------hcccceEEEeHHHHHhccHHHHHH-
Confidence            6999999999998865555432   11111111                      5799999984     344444444 


Q ss_pred             HHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCcc
Q 021054          257 KWIEELQAEPWSKAKKANDQPAFNWALNKTAGQVC  291 (318)
Q Consensus       257 ~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~~  291 (318)
                      .|.+.....- ..-....||+++|.++.+....++
T Consensus       173 ~~~~~~~~~~-~~~~~~~dqd~ln~~~~~~~~~L~  206 (257)
T cd06429         173 KWMELNQEEE-VTLWKLITLPPGLIVFYGLTSPLD  206 (257)
T ss_pred             HHHHHhhhcc-cchhhcCCccHHHHHccCeeEECC
Confidence            3444332210 000245789999999987654443

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose

Probab=84.11  E-value=4.3  Score=38.25  Aligned_cols=98  Identities=20%  Similarity=0.219  Sum_probs=51.6

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCCCccEEE-EE----eCHHHHHHHhcc----CCCc-eEEcCCCCCCccccccCchhH
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKHQDQVLV-IA----EDYATLYKVNGR----WPGH-AVLVPPAPDSQTAHKFGSQGF  165 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi~~~vlV-vA----lD~~a~~~c~~~----~pg~-~v~~~~~~d~~~~~~~gs~~f  165 (318)
                      ||+++...+..++...+..+|+.|-.=-+=| ..    ++++..+.+...    .-++ ++..++..+.    .+...+|
T Consensus         4 IVi~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~----~~~~~~~   79 (271)
T PF11051_consen    4 IVITAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGK----SFSKKGF   79 (271)
T ss_pred             EEEEecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeecccccc----ccccCCc
Confidence            4555555888888899999999875322322 23    344444444330    0011 1111111111    0110122


Q ss_pred             HHHHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcC
Q 021054          166 FNFTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQ  204 (318)
Q Consensus       166 ~~m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~  204 (318)
                      .    .|+   ..++-.=+ +||+.|+|++-++||-.+|.
T Consensus        80 ~----~K~---lA~l~ssFeevllLDaD~vpl~~p~~lF~  112 (271)
T PF11051_consen   80 Q----NKW---LALLFSSFEEVLLLDADNVPLVDPEKLFE  112 (271)
T ss_pred             h----hhh---hhhhhCCcceEEEEcCCcccccCHHHHhc
Confidence            1    243   22333334 69999999999999987776

It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	318
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	98.28
3u2u_A	263	Glycogenin-1, GN-1, GN1; structural genomics, stru	98.22
3tzt_A	276	Glycosyl transferase family 8; structural genomics	97.48
1g9r_A	311	Glycosyl transferase; alpha-beta structure; HET: U	97.38

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=98.28  E-value=6.5e-06  Score=78.37  Aligned_cols=161  Identities=12%  Similarity=0.084  Sum_probs=96.1

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCCCccEEEEEeC---HHHHHHHhccCCCceEEcCCCCCCc--cccccCchhHHHHHh
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAED---YATLYKVNGRWPGHAVLVPPAPDSQ--TAHKFGSQGFFNFTS  170 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAlD---~~a~~~c~~~~pg~~v~~~~~~d~~--~~~~~gs~~f~~m~~  170 (318)
                      |+..+|..|+.-+...+.|+++.+-...++|+..|   ++..+.+++.  ++.+......+..  .........+...++
T Consensus         7 vt~~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~--~~~v~~v~~l~~~~~~~~~~~~~~~~~~t~   84 (333)
T 1ll2_A            7 VTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIV--FDEVITVDILDSGDSAHLTLMKRPELGVTL   84 (333)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHH--CSEEEECCTTSTTSTTHHHHHHCGGGHHHH
T ss_pred             EEEEeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHh--CCEEEEEeecCCcchhhcccccccchHHHH
Confidence            44457899999999999999987654455555443   5556666665  3333322211111  000000011123456


Q ss_pred             hhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecCh
Q 021054          171 RRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTD  249 (318)
Q Consensus       171 ~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~  249 (318)
                      .|..+.. +  ..| .|+|.|+|++.++|+-+.|.-+ .+....|.               |+  ..++|+|+|.++++.
T Consensus        85 ~Kl~i~~-l--~~ydrvlYLDaD~lv~~di~eLf~~~-~~aAv~d~---------------~~--~~~fNsGvmlin~~~  143 (333)
T 1ll2_A           85 TKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFERE-ELSAAPDP---------------GW--PDCFNSGVFVYQPSV  143 (333)
T ss_dssp             HHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSC-SSEEEECS---------------SS--TTSEEEEEEEECCCH
T ss_pred             HHHHHhH-h--cCCCeEEEEeCCEEeccCHHHHhCCC-ceeEEecC---------------CC--CcceeeeEEEEeCCH
Confidence            6665543 2  355 5999999999999998877654 23322221               11  137999999999974


Q ss_pred             HHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhh
Q 021054          250 GAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNK  285 (318)
Q Consensus       250 ~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~  285 (318)
                      .   ..+++.+.+.+..   .-...||.++|.++.+
T Consensus       144 ~---~~~~l~~~~~~~~---~~~~~DQ~~LN~~f~~  173 (333)
T 1ll2_A          144 E---TYNQLLHVASEQG---SFDGGDQGLLNTFFNS  173 (333)
T ss_dssp             H---HHHHHHHHHHHTC---CTTSSHHHHHHHHTTT
T ss_pred             H---HHHHHHHHHHhcC---CCCCCCHHHHHHHHHh
Confidence            3   3455555544321   1256899999998875

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A

Probab=98.22  E-value=2.3e-05  Score=72.42  Aligned_cols=161  Identities=12%  Similarity=0.104  Sum_probs=96.8

Q ss_pred             EEEE-EeCcchHHHHHHHHHHhhhcCCCccEEEEE---eCHHHHHHHhccCCCceEEcCCCCCCcc---ccccCchhHHH
Q 021054           95 IIVC-AVSQPYLPFLNNWLISISRQKHQDQVLVIA---EDYATLYKVNGRWPGHAVLVPPAPDSQT---AHKFGSQGFFN  167 (318)
Q Consensus        95 VIVt-~~N~~y~~~l~Nwl~sl~~~gi~~~vlVvA---lD~~a~~~c~~~~pg~~v~~~~~~d~~~---~~~~gs~~f~~  167 (318)
                      ..|| .+|..|..-+...+.|+++.+-...++|+.   .+++..+.+++.  ++.+...+..+...   ....+.+.+ .
T Consensus         6 AyvTl~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~--~~~vi~V~~l~~~~~~~~~~~~rp~~-~   82 (263)
T 3u2u_A            6 AFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETV--FDEVIMVDVLDSGDSAHLTLMKRPEL-G   82 (263)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHH--SSEEEECCCCCCCCHHHHHHTTCTTG-G
T ss_pred             EEEEEEECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHc--CCeEEEeeecCCcchhhhhhhcCcch-h
Confidence            3344 468899999999999999987544444443   345666677766  45444322222111   001122222 3


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEe
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLR  246 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R  246 (318)
                      .++.|..+-. ++  .| .|++.|+|++.++|.-+.|..+ .+....|.               |+  ..++|+|++.+.
T Consensus        83 ~~~~kl~~~~-l~--~~~~vlylD~D~~v~~~~~~Lf~~~-~~aA~~d~---------------~~--~~~fNsGv~li~  141 (263)
T 3u2u_A           83 VTLTKLHCWS-LT--QYSKCVFMDADTLVLANIDDLFDRE-ELSAAPDP---------------GW--PDCFNSGVFVYQ  141 (263)
T ss_dssp             GGGGGGGGGG-CT--TCSEEEEECTTEEECSCCGGGGGSC-SSEEEECT---------------TS--TTSEEEEEEEEC
T ss_pred             HHhHHHHhcc-cc--CcceEEEEcCCEeeccCHHHHhCCC-cceEeccC---------------CC--CccccCeEEEEc
Confidence            4566665443 22  46 5999999999999987777654 23333331               11  248999999999


Q ss_pred             cChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhh
Q 021054          247 PTDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNK  285 (318)
Q Consensus       247 ~T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~  285 (318)
                      ++...   .++..+.+.+..   .....||.++|.++.+
T Consensus       142 p~~~~---~~~l~~~~~~~~---~~~~~DQd~LN~~f~~  174 (263)
T 3u2u_A          142 PSVET---YNQLLHLASEQG---SFDGGDQGILNTFFSS  174 (263)
T ss_dssp             CCHHH---HHHHHHHHHHHC---CTTSSHHHHHHHHTTT
T ss_pred             ccHHH---HHHHHHHHHhcC---CCCcccHHHHHHHhcc
Confidence            97543   344444333211   1356899999999975

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=97.48  E-value=0.00053  Score=63.24  Aligned_cols=188  Identities=12%  Similarity=0.066  Sum_probs=88.8

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCCCc--cEEEEEeC--HHHHHHHhcc--CCCceE--EcCCCCCCccccccCchhHHH
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKHQD--QVLVIAED--YATLYKVNGR--WPGHAV--LVPPAPDSQTAHKFGSQGFFN  167 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi~~--~vlVvAlD--~~a~~~c~~~--~pg~~v--~~~~~~d~~~~~~~gs~~f~~  167 (318)
                      |+.++|..|...+..-+.|+.+.+-..  ++.|++.+  ++..+.+.+.  ..++.+  +..+.......  -.+..|..
T Consensus         8 I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~s~   85 (276)
T 3tzt_A            8 LLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFA--KVTDRYPK   85 (276)
T ss_dssp             EEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC---------------CH
T ss_pred             EEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcC--ccccccCH
Confidence            678999999999999999987654312  34344433  4544545443  224432  11111001000  00111222


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccccccCCCCCCCCCCCCCCCCcccceeEE
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI  243 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~  243 (318)
                      .+..|.. +-+++...+ .|++.|+|++.++|.-+.+.-   +.-+....|....+...... ....+. ...++|+|++
T Consensus        86 ~~~~rl~-~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~-~~~l~~-~~~yfNsGV~  162 (276)
T 3tzt_A           86 EMYYRLL-AGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVN-RIRLGT-DTDYYNSGLL  162 (276)
T ss_dssp             HHHHHHT-HHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC----------------------CEEEEEE
T ss_pred             HHHHHHH-HHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHH-HhcCCC-CCCeEEeeEE
Confidence            3333432 233454455 699999999999998776653   23344444543211000000 000111 1268999999


Q ss_pred             EEecChHH-HHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCCc
Q 021054          244 YLRPTDGA-KLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQV  290 (318)
Q Consensus       244 y~R~T~~t-~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~~  290 (318)
                      .+-.+.-- ..+.+++.+.+.+.+  ..-...||+++|.++++....+
T Consensus       163 linl~~~R~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~f~~~~~~L  208 (276)
T 3tzt_A          163 LINLKRAREEIDPDEIFSFVEDNH--MNLLLPDQDILNAMYGDRIYPL  208 (276)
T ss_dssp             EEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEE
T ss_pred             EEEHHHHHhhhHHHHHHHHHHhcc--ccccCCChhHHHHHHhCCEEEC
Confidence            99776411 123333444443331  0124689999999998644333

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*

Probab=97.38  E-value=0.00063  Score=63.53  Aligned_cols=179  Identities=15%  Similarity=0.134  Sum_probs=93.2

Q ss_pred             EEEEeCcchHHHHHHHHHHh-hh-cCCCccEEEEEeC--HHHHHHHhccCC--Cce--EEcCCCCCCccccccCchhHHH
Q 021054           96 IVCAVSQPYLPFLNNWLISI-SR-QKHQDQVLVIAED--YATLYKVNGRWP--GHA--VLVPPAPDSQTAHKFGSQGFFN  167 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl-~~-~gi~~~vlVvAlD--~~a~~~c~~~~p--g~~--v~~~~~~d~~~~~~~gs~~f~~  167 (318)
                      |+.++|..|...+...+.|+ .+ .+..-++.|++.|  ++..+.+++...  ++.  ....+.......... ...+..
T Consensus         3 I~~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~s~   81 (311)
T 1g9r_A            3 IVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLN-IRHISI   81 (311)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCC-CTTCCG
T ss_pred             EEEECCHhHHHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccc-cccCCH
Confidence            66779999999999999999 33 3222245555654  566565654311  232  221111000000000 011112


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcCC---CCceeeecccccccCCC--CCCCCCCCCCCCCccccee
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQG---DHDVYFTDDMAAVKPLD--HSHDLPPPGKKGRTYICSC  241 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~---~aDv~~s~D~~~~~~~d--~~~~~p~~g~~g~~~~NtG  241 (318)
                      .+..|..+ -+++. .+ .|++.|+|++.++|.-+.+.-   +.-+....|........  ...+.+    .+..++|+|
T Consensus        82 ~~y~Rl~l-~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~----~~~~yfNsG  155 (311)
T 1g9r_A           82 TTYARLKL-GEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMA----DGEYYFNAG  155 (311)
T ss_dssp             GGGGGGGH-HHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCC----TTSCCEEEE
T ss_pred             HHHHHHHH-HHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCC----CCCceEeee
Confidence            34455543 44453 55 599999999999998766653   33344444532110000  000011    123589999


Q ss_pred             EEEEecCh----HHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          242 MIYLRPTD----GAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       242 f~y~R~T~----~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      +|.+..+.    ....-+.+|.+....     .....||.++|.++.+.
T Consensus       156 v~linl~~~r~~~~~~~~~~~~~~~~~-----~~~~~DQd~lN~~f~~~  199 (311)
T 1g9r_A          156 VLLINLKKWRRHDIFKMSSEWVEQYKD-----VMQYQDQDILNGLFKGG  199 (311)
T ss_dssp             EEEECHHHHTTSCHHHHHHHHHHHHTT-----TCSSHHHHHHHHHHTTS
T ss_pred             eeeeeHHHHHhcchHHHHHHHHHhccC-----cCccCCcCHHHHHHcCC
Confidence            99998753    111223334433221     13578999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	318
d1ll2a_	263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	98.31
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	98.25
d1o7qa_	287	alpha-1,3-galactosyltransferase catalytic domain {	80.35

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.31  E-value=3.3e-06  Score=74.40  Aligned_cols=163  Identities=12%  Similarity=0.020  Sum_probs=100.7

Q ss_pred             EEeCcchHHHHHHHHHHhhhcCCCccEEEEEeC---HHHHHHHhccCCCceEEcCCCCCC--ccccccCchhHHHHHhhh
Q 021054           98 CAVSQPYLPFLNNWLISISRQKHQDQVLVIAED---YATLYKVNGRWPGHAVLVPPAPDS--QTAHKFGSQGFFNFTSRR  172 (318)
Q Consensus        98 t~~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAlD---~~a~~~c~~~~pg~~v~~~~~~d~--~~~~~~gs~~f~~m~~~K  172 (318)
                      ..+|.+|+.-+...+.|+++.+-...++|+..+   ++..+.+++.  ++.+...+..+.  ..........+...++.|
T Consensus         9 ~~t~d~Yl~~a~vl~~SL~~~~~~~~~vvl~~~~i~~~~~~~L~~~--~~~~~~v~~i~~~~~~~~~~~~~~~~~~ty~K   86 (263)
T d1ll2a_           9 LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIV--FDEVITVDILDSGDSAHLTLMKRPELGVTLTK   86 (263)
T ss_dssp             EESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHH--CSEEEECCTTSTTSTTHHHHHHCGGGHHHHHH
T ss_pred             EEeCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHh--CCcceeEEeecCcchhhhhhhccccchhhhHH
Confidence            346999999999999999998764455555443   5666666665  333332221111  111111112333455566


Q ss_pred             HHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecChHH
Q 021054          173 PCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGA  251 (318)
Q Consensus       173 ~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~~t  251 (318)
                      ..+-. +  ..| .|++.|+|++-++|+-+.|..+.-..+....                  ...+.|+|++.++++...
T Consensus        87 l~i~~-l--~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~~~~~------------------~~~~~nsGv~l~~p~~~~  145 (263)
T d1ll2a_          87 LHCWS-L--TQYSKCVFMDADTLVLANIDDLFEREELSAAPDPG------------------WPDCFNSGVFVYQPSVET  145 (263)
T ss_dssp             GGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSS------------------STTSEEEEEEEECCCHHH
T ss_pred             HHHhh-h--cccceEEEeCCCEEEecCHHHHhcCCccceeccCC------------------CcccccCCcEEECccHHH
Confidence            65533 2  345 5999999999999998888654322221111                  124789999999999987


Q ss_pred             HHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCC
Q 021054          252 KLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQ  289 (318)
Q Consensus       252 ~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~  289 (318)
                      ..-+.+.......      ....||..+|..+......
T Consensus       146 ~~~i~~~~~~~~~------~~~~dq~~ln~~~~~~~~~  177 (263)
T d1ll2a_         146 YNQLLHVASEQGS------FDGGDQGLLNTFFNSWATT  177 (263)
T ss_dssp             HHHHHHHHHHTCC------TTSSHHHHHHHHTTTTTTS
T ss_pred             HHHHHHHHHhhCC------CChhhhhHHHHHHHhhhcc
Confidence            7665554433222      3568999999999765544

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=98.25  E-value=1.2e-06  Score=78.16  Aligned_cols=180  Identities=17%  Similarity=0.143  Sum_probs=96.3

Q ss_pred             EEEEeCcchHHHHHHHHHHhhhcCC--CccEEEEEe--CHHHHHHHhccC--CCceE--EcCCCCCCccccccCchhHHH
Q 021054           96 IVCAVSQPYLPFLNNWLISISRQKH--QDQVLVIAE--DYATLYKVNGRW--PGHAV--LVPPAPDSQTAHKFGSQGFFN  167 (318)
Q Consensus        96 IVt~~N~~y~~~l~Nwl~sl~~~gi--~~~vlVvAl--D~~a~~~c~~~~--pg~~v--~~~~~~d~~~~~~~gs~~f~~  167 (318)
                      ||.++|..|.+.+...+.|+.+..-  .-++.|++.  .++..+.+.+..  .++.+  ..-...+..... .....+..
T Consensus         3 Iv~~~D~nY~~~~~~~i~SL~~~~~~~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~s~   81 (282)
T d1ga8a_           3 IVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFP-LNIRHISI   81 (282)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHCTTSCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTTSC-CCCTTCCG
T ss_pred             EEEECCHHHHHHHHHHHHHHHHHCcCCCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcccc-ccccccCH
Confidence            6778999999999999999876432  123444443  355555554431  12222  221100000000 00112234


Q ss_pred             HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcC---CCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEE
Q 021054          168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQ---GDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI  243 (318)
Q Consensus       168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~---~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~  243 (318)
                      ++..|.. +-++|. +| .+++.|+|++-++|+-+.+.   ++.-+....|.......+......  ...+..++|+|+|
T Consensus        82 ~~y~Rl~-l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~--~~~~~~yfNsGVm  157 (282)
T d1ga8a_          82 TTYARLK-LGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIG--MADGEYYFNAGVL  157 (282)
T ss_dssp             GGGGGGG-HHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTT--CCTTSCCEEEEEE
T ss_pred             HHHHHHH-HhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhC--CCCCCceeeccee
Confidence            4556763 456665 56 49999999999999877664   344555555543211100000000  0123468999999


Q ss_pred             EEec-----ChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054          244 YLRP-----TDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT  286 (318)
Q Consensus       244 y~R~-----T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~  286 (318)
                      .+-.     ..-..++++. .+....     .....||.+||.++++.
T Consensus       158 l~n~~~~r~~~~~~~~~~~-~~~~~~-----~~~~~DQd~LN~~f~~~  199 (282)
T d1ga8a_         158 LINLKKWRRHDIFKMSSEW-VEQYKD-----VMQYQDQDILNGLFKGG  199 (282)
T ss_dssp             EECHHHHTTSCHHHHHHHH-HHHHTT-----TCSSTHHHHHHHHHTTS
T ss_pred             eechhhhhhhhHHHHHHHH-HHhccc-----CcccCchhHHHHHhcCC
Confidence            9932     2223333332 222211     13579999999998754

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: alpha-1,3-galactosyltransferase-like
domain: alpha-1,3-galactosyltransferase catalytic domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.35  E-value=2.2  Score=37.35  Aligned_cols=187  Identities=12%  Similarity=0.127  Sum_probs=98.9

Q ss_pred             HHHHhhcc--CCeE-EEEEeCcchHH-HHHHHHHHhhh---cCCCccEEEEEeCHHHHHHHhccCCC--ceEEcCCCCCC
Q 021054           84 QAASFVAK--NGTI-IVCAVSQPYLP-FLNNWLISISR---QKHQDQVLVIAEDYATLYKVNGRWPG--HAVLVPPAPDS  154 (318)
Q Consensus        84 ell~~~A~--~~tV-IVt~~N~~y~~-~l~Nwl~sl~~---~gi~~~vlVvAlD~~a~~~c~~~~pg--~~v~~~~~~d~  154 (318)
                      ++|++.-+  +=|| +++++-..|.+ |++.|++|.++   .|...++.|.+-+....-.. ++.++  ..++...    
T Consensus        35 ~~l~~~y~~~~~tIgl~vfAtgkY~~~Fl~~FleSaEk~Fm~g~~v~yyVFTD~~~~~P~i-~l~~~r~~~v~~v~----  109 (287)
T d1o7qa_          35 AVLDNYYAKQKITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRMPLI-ELGPLRSFKVFKIK----  109 (287)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGCCCC-CCCTTEEEEEEECC----
T ss_pred             HHHHHHHhhcCceEEEEEEEeChhHHHHHHHHHHHHHHhcCCCCeEEEEEEECCcccCCcc-ccCCccceEEEEcc----
Confidence            44555442  3344 66677778985 99999999988   57777888887765432111 11121  1122111    


Q ss_pred             ccccccCchhHHHHHhhhHHHHHHHHH----cCCe-EEEeecceeeecCCcC-CcCCCCceeee-cccccc-----cCCC
Q 021054          155 QTAHKFGSQGFFNFTSRRPCHLLHILE----LGYN-VMYNDVDMVWLKDPFP-YLQGDHDVYFT-DDMAAV-----KPLD  222 (318)
Q Consensus       155 ~~~~~~gs~~f~~m~~~K~~~l~~lL~----lGy~-VL~sDvDVVWLrdP~~-~~~~~aDv~~s-~D~~~~-----~~~d  222 (318)
                            ....|..++..|.+.+.+..+    ..+| +.+.|+|+.+ +||+- ...+  |.+.+ .-.+..     .+++
T Consensus       110 ------~~~~Wp~iTL~Rm~~i~~~i~~~~~~e~Dylf~~DaDm~f-~~~vg~E~L~--~lv~~lHp~~y~~~~~~fpyE  180 (287)
T d1o7qa_         110 ------PEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVF-QDKFGVETLG--ESVAQLQAWWYKADPNDFTYE  180 (287)
T ss_dssp             ------CCSSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEE-CSCBCGGGCS--SEEEEECTTTTTSCGGGSCCC
T ss_pred             ------ccCCCchhHHHHHHHHHHHHHHhhhccCCeEEEEeCCceE-eccccccccC--CccceecccccCCCCCCCCCc
Confidence                  112466778888888876443    2556 6788999988 66642 1111  22221 111111     1111


Q ss_pred             CC---CCCCCCCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCcc-cCCCCCChHHHHHHHhhc
Q 021054          223 HS---HDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWS-KAKKANDQPAFNWALNKT  286 (318)
Q Consensus       223 ~~---~~~p~~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~-~~~~~~DQ~afN~ll~~~  286 (318)
                      ..   .-.-+.| .|..+..+||+- =.++...++.+...+++...--. -.+.-+|---+|+-+-..
T Consensus       181 rrp~S~AyIp~~-egd~Yy~G~~~G-G~~~~vl~m~~~~~~~i~~D~~n~IiA~WHDESHLNkyf~~~  246 (287)
T d1o7qa_         181 RRKESAAYIPFG-EGDFYYHAAIFG-GTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLN  246 (287)
T ss_dssp             CCTTSTTCCCTT-CCSCCEEEEEEE-ECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHS
T ss_pred             CCCCccccccCC-CCceEEEeeecC-CCHHHHHHHHHHHHHhccCcccCCcceecccHHHHhhHHHhC
Confidence            11   1111112 234577777664 33455566666666655331000 023568899999987543