Citrus Sinensis ID: 021572

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccHHHccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHcccHcccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccEEEEEcccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MSTALYIiksppvpalwfphslqktpkfefpifrnpnisnstsncnSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGspilvsglspsGIAAAFLLGTLtwrafgpsgFLLVATYFIIGTAATKVKMAQKEAQGVAekrkgrrgpgsvigssaAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFkvvprgtegavsvegTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLnklfslpl
Flexible Loop (DISEMBL)
MSTALYIiksppvpalwFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQgvaekrkgrrgpgsvigsSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSeigkaygkttyLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Low Complexity Region (SEG)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRnpnisnstsncnssKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Disordered region (IsUnstruct)
****LYIIKSPPVPALWFPHSLQKTPKFEFPIFRN**************MLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLF****
Disordered Region (DISOPRED)
*******IKSPPVPA****************************************ANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQ*************RGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Disordered Region (DISEMBL)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Disordered Region (DISPRO)
*STALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHR*NAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGV******RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFSLPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
P73555	258	Uncharacterized membrane	N/A	no	0.516	0.620	0.5	2e-34
Q58343	238	Uncharacterized membrane	yes	no	0.390	0.508	0.300	4e-08

>sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 4/164 (2%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++ N  +  L +      L+P G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLW-QLGFVA 198
           T++   +KEA G+AEKR G+RGP +V GS+    +CA    FG    E  +LW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIAFGP---EPWQLWLALGYVA 134

Query: 199 SFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGT 242
           SF TKLSDT +SE+GKAYGK T+L+TT + VPRGTEGAVSVEGT
Sbjct: 135 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGT 178

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q58343|Y933_METJA Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 12/133 (9%)

Query: 136 GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL- 194
           G   ++V + +K+A+ + E  +  +   +V+ +     + A L+IFG         W L 
Sbjct: 66  GVLVSRVGLEKKKAKKMDETCRSLK---NVLANGLIPILFAILAIFGFN-------WALI 115

Query: 195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAW 254
           G+++S     SDT SSE+G    +   L+TTF+VV +GT+GA+++ GT AG+  + L+  
Sbjct: 116 GYISSIAAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGL 175

Query: 255 VGCLT-GQVSLII 266
            G L  G + +++
Sbjct: 176 FGYLLFGDIKIVL 188

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
255582681	320	conserved hypothetical protein [Ricinus	0.767	0.743	0.742	3e-93
359493882	315	PREDICTED: uncharacterized membrane prot	0.812	0.8	0.689	2e-90
302142819	662	unnamed protein product [Vitis vinifera]	0.812	0.380	0.689	2e-90
224116968	273	predicted protein [Populus trichocarpa]	0.683	0.776	0.798	4e-90
356544132	270	PREDICTED: uncharacterized membrane prot	0.658	0.755	0.833	2e-88
356549616	344	PREDICTED: uncharacterized membrane prot	0.680	0.613	0.815	7e-88
21592713	333	unknown [Arabidopsis thaliana]	0.654	0.609	0.753	3e-83
18412044	333	uncharacterized transmembrane protein [A	0.654	0.609	0.753	4e-83
297842641	334	integral membrane family protein [Arabid	0.654	0.607	0.753	2e-82
42572161	342	uncharacterized transmembrane protein [A	0.654	0.593	0.721	6e-81

>gi|255582681|ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis] gi|223528199|gb|EEF30259.1| conserved hypothetical protein [Ricinus communis]

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/241 (74%), Positives = 199/241 (82%), Gaps = 3/241 (1%)

Query: 27  KFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAP---SLQVAVSEAMNLVQLSQPTWQSA 83
           +F     R   I    SN    KML   +    P   S+Q A+S AMNL+Q + PTWQSA
Sbjct: 18  QFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQTPNAVSMQGALSGAMNLIQSAPPTWQSA 77

Query: 84  LLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVK 143
           L++NV+IF+LGSPIL+SGLS SGI AAFLLGTLTWRAFGPSGFLLVA YF+IGTAATKVK
Sbjct: 78  LVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGFLLVACYFVIGTAATKVK 137

Query: 144 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTK 203
           MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+GVGG  FSRLW+LGFVASFCTK
Sbjct: 138 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFSRLWELGFVASFCTK 197

Query: 204 LSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVS 263
           LSDTVSSEIGKAYGK TYLVTTFK+VPRGTEGAVSVEGT AG+ ASILLA +GC  G++ 
Sbjct: 198 LSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGLLASILLASIGCFLGEIH 257

Query: 264 L 264
           +
Sbjct: 258 I 258

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493882|ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis vinifera]

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 184/267 (68%), Positives = 209/267 (78%), Gaps = 15/267 (5%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H+   T +  +P   +P            KM L  +A  N 
Sbjct: 3   LSTTLF--RFPPIPLQQFHHT-SSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 49

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 50  VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 109

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 110 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 169

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 170 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 229

Query: 239 VEGTFAGIFASILLAWVGCLTGQVSLI 265
            EGT AG+ ASILLA+VGCL GQ+  +
Sbjct: 230 AEGTSAGLLASILLAFVGCLMGQIDAV 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142819|emb|CBI20114.3| unnamed protein product [Vitis vinifera]

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 184/267 (68%), Positives = 208/267 (77%), Gaps = 15/267 (5%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H    T +  +P   +P            KM L  +A  N 
Sbjct: 350 LSTTLF--RFPPIPLQQF-HHTSSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 396

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 397 VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 456

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 457 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 516

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 517 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 576

Query: 239 VEGTFAGIFASILLAWVGCLTGQVSLI 265
            EGT AG+ ASILLA+VGCL GQ+  +
Sbjct: 577 AEGTSAGLLASILLAFVGCLMGQIDAV 603

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116968|ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 170/213 (79%), Positives = 190/213 (89%), Gaps = 1/213 (0%)

Query: 51  LLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAA 110
           +L HR +A  S+Q  +S+AMNL+Q + PTW+SAL SN++IFV+GSPILVSGLS SGI AA
Sbjct: 1   MLPHRPHAV-SMQGVLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAA 59

Query: 111 FLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 170
           +LLGTLTWRAFG SGFLLVA+YF+IGTA TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA
Sbjct: 60  YLLGTLTWRAFGASGFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 119

Query: 171 AGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 230
           AGCVCAFLSIFG GG  F  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP
Sbjct: 120 AGCVCAFLSIFGTGGRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 179

Query: 231 RGTEGAVSVEGTFAGIFASILLAWVGCLTGQVS 263
           RGTEGAVS EGT AG+ ASILLA +GC+ G+++
Sbjct: 180 RGTEGAVSAEGTLAGLLASILLASIGCILGEIN 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544132|ref|XP_003540509.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/204 (83%), Positives = 182/204 (89%)

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
           A  +Q AV  A+ LVQ S  TWQSALLSN +IF+LGSPILVSGLS SGI AAFLLGTLTW
Sbjct: 3   ATRIQDAVGGALALVQSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTW 62

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEKR+GRRGPGSVIGSSAAGC+CAFL
Sbjct: 63  RAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFL 122

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           +IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFK+VPRGTEGAVS
Sbjct: 123 TIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVS 182

Query: 239 VEGTFAGIFASILLAWVGCLTGQV 262
           VEGT AGI ASI+LA V  L G+V
Sbjct: 183 VEGTLAGILASIVLALVSFLMGEV 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549616|ref|XP_003543188.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  330 bits (845), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 172/211 (81%), Positives = 184/211 (87%)

Query: 52  LLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAF 111
           L  R   A  +Q AV  A+ LVQ S  TWQSALLSN +IF LGSPILVSGLS SGI AAF
Sbjct: 70  LFPRTMHASRIQDAVGGALALVQSSPATWQSALLSNALIFFLGSPILVSGLSLSGIGAAF 129

Query: 112 LLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           LLGTLTWRAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEK++GRRGPGSVIGSSAA
Sbjct: 130 LLGTLTWRAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKKRGRRGPGSVIGSSAA 189

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GC+CAFL+IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR
Sbjct: 190 GCICAFLTIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 249

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQV 262
           GTEGAVSVEGT AGI ASI+LA+V  L G+V
Sbjct: 250 GTEGAVSVEGTLAGILASIVLAFVSFLIGEV 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592713|gb|AAM64662.1| unknown [Arabidopsis thaliana]

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 153/203 (75%), Positives = 181/203 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQVS 263
           GT AG+ AS  LA VGC  GQ++
Sbjct: 247 GTLAGLLASFFLASVGCFLGQIT 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412044|ref|NP_565184.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|4836871|gb|AAD30574.1|AC007260_5 Unknown protein [Arabidopsis thaliana] gi|14334658|gb|AAK59507.1| unknown protein [Arabidopsis thaliana] gi|17104591|gb|AAL34184.1| unknown protein [Arabidopsis thaliana] gi|332198007|gb|AEE36128.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 153/203 (75%), Positives = 181/203 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQVS 263
           GT AG+ AS  LA VGC  GQ++
Sbjct: 247 GTLAGLLASFFLASVGCFLGQIT 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842641|ref|XP_002889202.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297335043|gb|EFH65461.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/203 (75%), Positives = 181/203 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 68  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 127

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 128 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 187

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 188 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSIE 247

Query: 241 GTFAGIFASILLAWVGCLTGQVS 263
           GT AG+ AS  LA VGC  GQ++
Sbjct: 248 GTLAGLLASFFLASVGCFLGQIT 270

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572161|ref|NP_974171.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|332198008|gb|AEE36129.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 153/212 (72%), Positives = 181/212 (85%), Gaps = 9/212 (4%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           +G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAA
Sbjct: 127 YGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAA 186

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPR
Sbjct: 187 GCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPR 246

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQVS 263
           GTEGA+S+EGT AG+ AS  LA VGC  GQ++
Sbjct: 247 GTEGAMSLEGTLAGLLASFFLASVGCFLGQIT 278

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2202955	342	AT1G78620 [Arabidopsis thalian	0.664	0.602	0.720	1.3e-77
UNIPROTKB|G4NEB5	376	MGG_00802 "Uncharacterized pro	0.2	0.164	0.375	3.1e-07
UNIPROTKB|A7E3R1	336	TMEM19 "Uncharacterized protei	0.583	0.538	0.275	1.2e-05
UNIPROTKB|Q96HH6	336	TMEM19 "Transmembrane protein	0.612	0.565	0.271	9.8e-05
ZFIN|ZDB-GENE-040625-78	322	tmem19 "transmembrane protein	0.593	0.571	0.26	0.00026
UNIPROTKB|F1PGI2	297	TMEM19 "Uncharacterized protei	0.593	0.619	0.273	0.00037
DICTYBASE|DDB_G0287439	295	DDB_G0287439 "Transmembrane pr	0.464	0.488	0.285	0.00047
UNIPROTKB|F1SH34	336	TMEM19 "Uncharacterized protei	0.535	0.494	0.284	0.00061
TAIR|locus:2147705	288	AT5G19930 [Arabidopsis thalian	0.470	0.506	0.288	0.00098

TAIR|locus:2202955 AT1G78620 [Arabidopsis thaliana (taxid:3702)]

 Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
 Identities = 155/215 (72%), Positives = 183/215 (85%)

Query:    58 AAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLT 117
             AA S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLT
Sbjct:    64 AAASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLT 123

Query:   118 WRAFGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGS 168
             WRA+G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGS
Sbjct:   124 WRAYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGS 183

Query:   169 SAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKV 228
             SAAGCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+
Sbjct:   184 SAAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKI 243

Query:   229 VPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVS 263
             VPRGTEGA+S+EGT AG+ AS  LA VGC  GQ++
Sbjct:   244 VPRGTEGAMSLEGTLAGLLASFFLASVGCFLGQIT 278

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|G4NEB5 MGG_00802 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 107 (42.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query:   191 LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT--TFKVVPRGTEGAVSVEGTFAGIFA 248
             L  +G +A++    +DT SSE+G     T  L+T  T + VPRGT G V+  G  AG+  
Sbjct:   135 LLPIGIIANYAAMAADTFSSELGILSSATPRLITSPTLRKVPRGTNGGVTALGLGAGLLG 194

Query:   249 SILL 252
             S+++
Sbjct:   195 SMVV 198

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A7E3R1 TMEM19 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 54/196 (27%), Positives = 83/196 (42%)

Query:    77 QPT--WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLLVATYF 133
             QP   W+      V + ++ +      L  SG     ++G  LT   F  S F  + T+F
Sbjct:    47 QPVSPWRWLFSVVVTVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTSLVTFF 104

Query:   134 IIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVG-G---FEFS 189
             +  +  TK K   K+      K  G+R    V  + A     A L +   G G    +FS
Sbjct:   105 LSSSKLTKWKGEAKKHLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIESGPGEIPIDFS 164

Query:   190 RL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVSVEGTF 243
             R     W  L  +A+  +   DT +SE+G    K+T  L+TT++ VP GT G V+V G  
Sbjct:   165 RQHTASWMCLSLLAALASSAGDTWASEVGPVLSKSTPRLITTWEKVPVGTNGGVTVVGLA 224

Query:   244 AGIFASILLAWVGCLT 259
             + +     +     LT
Sbjct:   225 SSLLGGTFVGITYFLT 240

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96HH6 TMEM19 "Transmembrane protein 19" [Homo sapiens (taxid:9606)]

 Score = 120 (47.3 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 57/210 (27%), Positives = 89/210 (42%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ + +    L  SG     ++G  LT   F  S F  
Sbjct:    45 NLRPISPWRW---LFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 ------EFSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
                   ++S  W  L  +A+      DT +SE+G    K++  L+TT++ VP GT G V+
Sbjct:   160 PVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKVPVGTNGGVT 219

Query:   239 VEGTFAGIFASILLAWVGCLTGQVSLIIVS 268
             V G  + +       +VG       LI V+
Sbjct:   220 VVGLVSSLLGG---TFVGIAYFLTQLIFVN 246

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040625-78 tmem19 "transmembrane protein 19" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 52/200 (26%), Positives = 79/200 (39%)

Query:    62 LQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAF 121
             L +  S     +Q   P W+      + +F+         L   G   A L+G +   A 
Sbjct:    21 LSLTASTYYGTLQPVSP-WRWLFSVLIPLFITFRASKRKSLDHGGAIGAMLVGFVLTMA- 78

Query:   122 GPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF 181
               S F ++ T+FI  T  T+ K   K+      K  G+R    V  +       A L + 
Sbjct:    79 NMSFFAVLLTFFITSTKLTRWKGEIKKKIDPEYKEGGQRNWLQVFCNGGVPTELALLYMI 138

Query:   182 GVGGFE--------FSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPR 231
               G  E        +S  W  L  + +      DT +SE+G    K+   L+TT++ VP 
Sbjct:   139 EAGPGEMAIDFAKQYSASWMCLSLLGALACSTGDTWASEVGPVLSKSKPKLITTWRDVPT 198

Query:   232 GTEGAVSVEGTFAGIFASIL 251
             GT G V    T  G+ AS+L
Sbjct:   199 GTNGGV----TSVGLLASVL 214

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1PGI2 TMEM19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
 Identities = 55/201 (27%), Positives = 84/201 (41%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:     6 NLQPISPWRW---LFSVVVPVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTS 60

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:    61 LLMFFLSSSKLTKWKGEIKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 120

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+      DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   121 PIDFSKQYTASWMCLSLLAALACSAGDTWASEVGPVLSKSPPRLITTWEKVPVGTNGGVT 180

Query:   239 VEGTFAGIFASILLAWVGCLT 259
             V G  + +     +     LT
Sbjct:   181 VVGLVSSLLGGTFVGITYFLT 201

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287439 DDB_G0287439 "Transmembrane protein 19" [Dictyostelium discoideum (taxid:44689)]

 Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
 Identities = 44/154 (28%), Positives = 66/154 (42%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L+ SG   A+L G  T   FG +   L+ +++   +  TK K + K+         G+R 
Sbjct:    30 LNQSGTITAWLTGVSTC-IFGSTFATLLLSFYFSSSYLTKYKSSIKKTIEDGHTAGGQRN 88

Query:   162 PGSVIGSSAAGCVCA----FLS-----IFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEI 212
                V+ +S  G + A    F S     +       FS      F+  +     DT +SE+
Sbjct:    89 YIQVLSNSLPGTIFAAIFYFFSKSSNTLINFNNDFFSSFIICCFIGHYSCCNGDTWASEL 148

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGI 246
             G        L+TTFK VP+GT G +S  G  A I
Sbjct:   149 GILSKGEPILITTFKKVPKGTNGGLSPLGIGASI 182

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1SH34 TMEM19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 113 (44.8 bits), Expect = 0.00061, P = 0.00061
 Identities = 52/183 (28%), Positives = 80/183 (43%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:    45 NLQPISPWRW---LFSVVVPVLIISNGFKKKSLDHSGAIGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEAKKRLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+  +   DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   160 PIDFSKQHTASWMCLSLLAALASSAGDTWASEVGTVLSKSPPRLITTWEKVPVGTNGGVT 219

Query:   239 VEG 241
             + G
Sbjct:   220 MVG 222

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2147705 AT5G19930 [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00098
 Identities = 45/156 (28%), Positives = 69/156 (44%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L  SG  A FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct:    29 LDLSGGIAGFLVMTIHFTAGFRYGALLLV-FFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 87

Query:   162 PGSVIGSSAAGCVCAFLSIFGVGGFEF---SRLWQL------GFVASFCTKLSDTVSSEI 212
                V+ +S    V   ++    G  +    S+  ++      G +  +     DT SSE+
Sbjct:    88 WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 147

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFA 248
             G        L+TTFK V +GT G V+  G  A + A
Sbjct:   148 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAA 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.138   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       296   0.00093  115 3  11 22  0.43    33
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  183 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.74u 0.10s 22.84t   Elapsed:  00:00:01
  Total cpu time:  22.74u 0.10s 22.84t   Elapsed:  00:00:01
  Start:  Mon May 20 21:37:10 2013   End:  Mon May 20 21:37:11 2013

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
pfam01940	224	pfam01940, DUF92, Integral membrane protein DUF92	2e-59
TIGR00297	237	TIGR00297, TIGR00297, TIGR00297 family protein	5e-43
COG1836	247	COG1836, COG1836, Predicted membrane protein [Func	1e-42

>gnl|CDD|216799 pfam01940, DUF92, Integral membrane protein DUF92

 Score =  189 bits (482), Expect = 2e-59
 Identities = 78/185 (42%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 83  ALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV 142
           A+L N+++  L     +  L+ SG  AA LLGTL W   G   F L+  +F++G+ ATK+
Sbjct: 1   AVLLNLLLGALA--YRLKSLTLSGALAAVLLGTLIWGLGGWRWFALLLVFFVLGSLATKL 58

Query: 143 KMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCT 202
              +K A G+AE R GRRGP +V+G+     + A L   G  G     L+  GFV SF  
Sbjct: 59  GYKRKAALGIAEARGGRRGPENVLGNGGVAAILALLYALGPTGAS---LFLAGFVGSFAA 115

Query: 203 KLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQV 262
            L+DT +SEIGK  G+T  L+TT K VP GT G VS+ GT A +  S+L+A V  L G +
Sbjct: 116 ALADTWASEIGKLSGRTPRLITTLKPVPPGTSGGVSLLGTLASLLGSLLIALVAWLLGLI 175

Query: 263 SLIIV 267
           S   V
Sbjct: 176 SPPGV 180

Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown. Length = 224

>gnl|CDD|213522 TIGR00297, TIGR00297, TIGR00297 family protein

 Score =  147 bits (373), Expect = 5e-43
 Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 5/201 (2%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++  V  F+L        L P G   A+++G +     G  G L++  +F +G+A 
Sbjct: 4   WLSAVILCV--FLLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAV 61

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVAS 199
           T+    +K+A G+AEKR G+RGP +V G+     + A    FG    E+     LG+VAS
Sbjct: 62  TRYGQEEKKAAGIAEKRSGQRGPKNVWGNGLTPALFALAIAFG---PEWDLWLALGYVAS 118

Query: 200 FCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLT 259
             T LSDT++SEIGKAYGK   L+TT + V  GT+GA+SVEGT AG   ++ +A +G L 
Sbjct: 119 VATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALLGYLL 178

Query: 260 GQVSLIIVSFHLFSDFTHALM 280
           G +S   + F   + F    +
Sbjct: 179 GLISFKGILFSTLAAFAGTNL 199

[Hypothetical proteins, Conserved]. Length = 237

>gnl|CDD|224749 COG1836, COG1836, Predicted membrane protein [Function unknown]

 Score =  147 bits (372), Expect = 1e-42
 Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 6/194 (3%)

Query: 76  SQPTWQSALLSNVVIFVLGSPILVSG-LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFI 134
           +Q      LL+ ++I  LG+    +  L  SG  +A LLG L     G   FLL+  +F 
Sbjct: 6   TQMAIDPLLLALLLILFLGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFA 65

Query: 135 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL 194
           +G+ ATK K  +KEA GVAE R G R   +V+G+  A  + A L       +   +LW L
Sbjct: 66  LGSLATKYKYEEKEALGVAEGRDGARSLENVLGNGLAALLFAVLYAI----YPDPQLWFL 121

Query: 195 -GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLA 253
            GF AS  T  +DT++SEIGKAYGK   L+TTFK V  GT GAVS+ G  A +  + ++A
Sbjct: 122 GGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAAVAGAFIIA 181

Query: 254 WVGCLTGQVSLIIV 267
            +  L G +SL  V
Sbjct: 182 LLSYLVGYISLGGV 195

Length = 247

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
TIGR00297	237	conserved hypothetical protein TIGR00297.	100.0
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	100.0
COG1836	247	Predicted membrane protein [Function unknown]	100.0
KOG4491	323	consensus Predicted membrane protein [Function unk	100.0
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	95.81
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	92.62
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	87.66

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=100.00  E-value=8.8e-60  Score=434.39  Aligned_cols=202  Identities=37%  Similarity=0.606  Sum_probs=178.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhhhhhhcchhhhhhhhhhhhccC
Q 021572           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (310)
Q Consensus        79 ~w~~a~~~n~~l~~~~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~~~~~ekkgG  158 (310)
                      +|.++++++.+  +...+||+|+||++|+++|+++|++++...|++|+.+++.||++||++||+|+++|++++++|||+|
T Consensus         3 ~~~~a~~~~~~--l~~~~~~~~~L~~sG~~~a~~vG~~~~~~~g~~~~~~ll~Ff~~sS~~Tk~~~~~K~~~~~~e~~gg   80 (237)
T TIGR00297         3 LWLSAVILCVF--LLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQEEKKAAGIAEKRSG   80 (237)
T ss_pred             HHHHHHHHHHH--HHHHHHHHccCCHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHhccHHHHHhcccccccCC
Confidence            59999999876  5566799999999999999999999988899999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccc
Q 021572          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (310)
Q Consensus       159 ~R~~~QVlaNg~~a~l~All~~~~~~~~~~~~~~~lafvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVS  238 (310)
                      +||++||++||+++++|+++|.+.+.   .+..+.++|++++||++|||||||||++|+++||+||||||||||||||||
T Consensus        81 ~R~~~qVlaNg~~~~~~al~~~~~~~---~~~~~~~~f~~s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~~GT~GgVS  157 (237)
T TIGR00297        81 QRGPKNVWGNGLTPALFALAIAFGPE---WDLWLALGYVASVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAIS  157 (237)
T ss_pred             CCCHHHHHHhhHHHHHHHHHHHhccc---chHHHHHHHHHHHHHHHcchHHHhhhhccCCCCeEeecCccCCCCCCCccc
Confidence            99999999999999999999877543   256778999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhcchhhHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021572          239 VEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFS  307 (310)
Q Consensus       239 llGtlAsllGa~~Ia~va~llg~~~~~~~~~~~~~~~g~~g~lfdSvl~~~~~~~~aGl~GSllDSll~  307 (310)
                      ++||+|+++|+++|+..+++++..+...                      +++..++|++||++||+||
T Consensus       158 ~~Gt~As~~Ga~~I~~~~~~~~~~~~~~----------------------~~~~~~aG~~Gsl~DSlLG  204 (237)
T TIGR00297       158 VEGTLAGFAGALAIALLGYLLGLISFKG----------------------ILFSTLAAFAGTNLDSLLG  204 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHH----------------------HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999988887655322                      3344556666666666655

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=1e-58  Score=424.70  Aligned_cols=193  Identities=37%  Similarity=0.468  Sum_probs=172.9

Q ss_pred             HHHHHHHhhcCCChHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhhhhhhcchhhhhhhhhhhhccCccCcccccccch
Q 021572           91 FVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA  170 (310)
Q Consensus        91 ~~~~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~~~~~ekkgG~R~~~QVlaNg~  170 (310)
                      +++..+||+|+||++|+++|+++|++++...||+++++++.||++||++||+|+++|++++++|+|+|+||++||+|||+
T Consensus         7 ~l~~~a~~~k~Lt~sGa~aa~~vG~~~~~~~g~~~~~~L~~FF~~ss~~Tk~~~~~K~~~~~~~~~~g~R~~~QVlaNg~   86 (226)
T PF01940_consen    7 LLAILAYKKKSLTLSGALAAFLVGTLIYGFGGWPWFLLLLAFFISSSLATKYKKERKEKLGEAEKKGGRRDWWQVLANGG   86 (226)
T ss_pred             HHHHHHHHHCCCCHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCChHHHHHhcccccCCCCCChHHhhhccH
Confidence            46668899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccchhHHHHHHHHHH
Q 021572          171 AGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASI  250 (310)
Q Consensus       171 ~a~l~All~~~~~~~~~~~~~~~lafvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVSllGtlAsllGa~  250 (310)
                      ++++|+++|.+.+  +..++.+.++|++++||++|||||||||++|+++||+||||||||||||||||++||+|+++|++
T Consensus        87 ~a~~~al~~~~~~--~~~~~~~~~~~~~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~GgVS~lGt~as~~Ga~  164 (226)
T PF01940_consen   87 VAALCALLYAFFP--STPAPLLLLAFLGSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSGGVSLLGTLASLAGAL  164 (226)
T ss_pred             HHHHHHHHHHHhc--ccchHHHHHHHHHHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCCeechHHHHHHHHHHH
Confidence            9999999988754  12367899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcchhhHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021572          251 LLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLFS  307 (310)
Q Consensus       251 ~Ia~va~llg~~~~~~~~~~~~~~~g~~g~lfdSvl~~~~~~~~aGl~GSllDSll~  307 (310)
                      +|++++++++..+...                      +.+..++|++||++||+||
T Consensus       165 ~Ia~~~~~~~~~~~~~----------------------~~~~~~~G~~Gsl~DSlLG  199 (226)
T PF01940_consen  165 LIALVAFLLGLISFPL----------------------VLLIALAGFLGSLLDSLLG  199 (226)
T ss_pred             HHHHHHHHHHccchHH----------------------HHHHHHHHHHHHHHHHHhh
Confidence            9999999987544333                      2233566666666666665

; GO: 0016021 integral to membrane

>COG1836 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=4.3e-53  Score=389.40  Aligned_cols=205  Identities=36%  Similarity=0.404  Sum_probs=186.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhhhhhhcchhhhhhhhhhhhccC
Q 021572           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (310)
Q Consensus        79 ~w~~a~~~n~~l~~~~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~~~~~ekkgG  158 (310)
                      +|+.+++++..  +..++||+|.||++|.++|+++|.+++...||+|+++++.||++||.+||+|+++|++++.+|+|+|
T Consensus        12 ~~l~all~~~~--L~~la~~~k~Ld~~G~~~A~~lG~~i~~~~g~~~fllll~Ff~~g~l~Tk~~~~~K~~~gvaE~~~g   89 (247)
T COG1836          12 PLLLALLLILF--LGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFALGSLATKYKYEEKEALGVAEGRDG   89 (247)
T ss_pred             HHHHHHHHHHH--HHHHHHHhccCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccc
Confidence            59999999876  5567799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccc
Q 021572          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (310)
Q Consensus       159 ~R~~~QVlaNg~~a~l~All~~~~~~~~~~~~~~~lafvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVS  238 (310)
                      .|+.+||++|++++.+|+++|...+++   +.++..+|++|+|+++|||||||||+.++++|||||||||||||||||||
T Consensus        90 ~R~~~NV~gn~l~~~l~av~~~~~~~~---~~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS  166 (247)
T COG1836          90 ARSLENVLGNGLAALLFAVLYAIYPDP---QLWFLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVS  166 (247)
T ss_pred             cccHHHHhhccHHHHHHHHHHHhCCCc---hHHHHHHHHHHHHHHhhhHHHHHHhHhhCCCeEEEEeeeEcCCCCCCccc
Confidence            999999999999999999998654332   45788999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhcchhhHHHHHhhhhhhhhhHHHHHHHHHHH
Q 021572          239 VEGTFAGIFASILLAWVGCLTGQVSLIIVSFHLFSDFTHALMLFTSMFSYFF  290 (310)
Q Consensus       239 llGtlAsllGa~~Ia~va~llg~~~~~~~~~~~~~~~g~~g~lfdSvl~~~~  290 (310)
                      ++||+|+++|+++|++++++++..+...+.  +.+..|+.|..+||++|.++
T Consensus       167 ~~GelAav~Ga~iIal~~~l~~~~~~~~v~--~vtlaGf~G~~iDSllGAtl  216 (247)
T COG1836         167 LVGELAAVAGAFIIALLSYLVGYISLGGVL--SVTLAGFAGTNIDSLLGATL  216 (247)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhcccchhH--HHHHHHHHhhhHHHHhhHHH
Confidence            999999999999999999999888544432  35777788999999888754

>KOG4491 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.6e-50  Score=368.96  Aligned_cols=215  Identities=21%  Similarity=0.265  Sum_probs=183.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHhhchhhHHHHHHHHhhhhhhhhcchhhhhhhhhhhhcc-
Q 021572           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRK-  157 (310)
Q Consensus        79 ~w~~a~~~n~~l~~~~~~~~~ksLT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~~~~~ekkg-  157 (310)
                      +|+.++++..+  +...+||+|+||.||++++++||++.-. ...+.|..|++||++||.+||+|++.|++.+.+|+|+ 
T Consensus        41 RwlFsvvvp~l--i~~~~lkrkSld~SGa~~G~lV~filtI-a~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~~eg~  117 (323)
T KOG4491|consen   41 RWLFSVVVPVL--IVSNGLKRKSLDHSGALGGLLVGFILTI-ANHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEYKEGL  117 (323)
T ss_pred             HHHHHHHHHHH--HHHHHHhhcccccccchhHHHHHHHHHH-hcchhHHHHHHHHHccchhhhHHHHHHHHHHHHHhhcc
Confidence            99999999876  5567799999999999999999997432 3455789999999999999999999999999888876 


Q ss_pred             CccCcccccccchHHHHHHHHHHHhcCCcc---------hhHHHHHHHHHHHHHhhchhhhhhhh-cccCCCceEeeCCe
Q 021572          158 GRRGPGSVIGSSAAGCVCAFLSIFGVGGFE---------FSRLWQLGFVASFCTKLSDTVSSEIG-KAYGKTTYLVTTFK  227 (310)
Q Consensus       158 G~R~~~QVlaNg~~a~l~All~~~~~~~~~---------~~~~~~lafvas~Aaa~ADTwASEIG-~ls~~~PrLITT~K  227 (310)
                      |||+|.||+|||+++...+++|....++..         ...++.++.++++|||++|||+||+| ++|++.||+|||||
T Consensus       118 GQRNWvQVlCNggva~~Lally~~~~G~ge~~vDf~~~y~~swl~~~~~~a~ACcnGDTWsSElG~VLS~~~PrlItTw~  197 (323)
T KOG4491|consen  118 GQRNWVQVLCNGGVATELALLYMIENGPGEIPVDFSKQYSASWLCLSLLAALACCNGDTWSSELGPVLSKSSPRLITTWE  197 (323)
T ss_pred             CccchhhhhcCCcchHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHhcCCChhhhhhcchhccCCCceEEeee
Confidence            999999999999999999999987765421         23456789999999999999999999 89999999999999


Q ss_pred             ecCCCCCcccchhHHHHHHHHHHHHHHHHHHhhcchhhH-HHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021572          228 VVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQVSLII-VSFHLFSDFTHALMLFTSMFSYFFLYALICLFTSTLNKLF  306 (310)
Q Consensus       228 ~VppGTnGGVSllGtlAsllGa~~Ia~va~llg~~~~~~-~~~~~~~~~g~~g~lfdSvl~~~~~~~~aGl~GSllDSll  306 (310)
                      |||+|||||||..|.+++++|+.++++-.++.+++...- ..+. ..           .|+++.||++||||||++||+|
T Consensus       198 ~Vp~GTNGGVt~~Gl~~sLlgGt~VG~~yf~t~l~tv~c~ldis-~p-----------QwpiIafgglAGL~GSlvDS~L  265 (323)
T KOG4491|consen  198 KVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLITVNCDLDIS-AP-----------QWPIIAFGGLAGLLGSLVDSYL  265 (323)
T ss_pred             ecccCCCCCEeeHHHHHHHhccceeehHhhhhhhheeecccccC-cc-----------cCcEeehhhHHHHHHHHHHHHh
Confidence            999999999999999999999999988776665543221 1111 22           3689999999999999999999


Q ss_pred             CC
Q 021572          307 SL  308 (310)
Q Consensus       307 ~~  308 (310)
                      |-
T Consensus       266 Ga  267 (323)
T KOG4491|consen  266 GA  267 (323)
T ss_pred             hh
Confidence            84

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=95.81  E-value=0.042  Score=49.22  Aligned_cols=56  Identities=16%  Similarity=0.354  Sum_probs=42.1

Q ss_pred             HHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 021572          195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLT  259 (310)
Q Consensus       195 afvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVSllGtlAsllGa~~Ia~va~ll  259 (310)
                      .+.+-...+.+|++|+=+|+.+||++         .|-.+..=|+||++++++++++++.+.+..
T Consensus       132 ~~~~i~~~~~gD~~A~l~G~~fGk~~---------~~~~sp~KT~EGsi~~~i~~~i~~~~~~~~  187 (259)
T PF01148_consen  132 ALIGILILGIGDSFAYLVGRRFGKHL---------APKISPKKTWEGSIAGFISSFIISFLLLYY  187 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCc---------CCCCCCCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            34556777889999999999999871         112333349999999999999997765443

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=92.62  E-value=1.6  Score=40.32  Aligned_cols=55  Identities=31%  Similarity=0.423  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHH
Q 021572          193 QLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGC  257 (310)
Q Consensus       193 ~lafvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVSllGtlAsllGa~~Ia~va~  257 (310)
                      -.+.++=++.+.+|+.||=+|+.++++++-.-+-|          |++|++|.++.++++..+.+
T Consensus       114 ~~~~~~I~~l~~GD~lAsiiG~~~G~~~~~~~~~K----------SleGSla~fi~~~l~~~~~~  168 (216)
T COG0170         114 EVAIAGILVLALGDGLASIIGKRYGRHKRILGNGK----------SLEGSLAFFIASFLVLLVLY  168 (216)
T ss_pred             HHHHHHHHHHHHhhHHHHHhCcccCccccccCCCC----------chhhhHHHHHHHHHHHHHHH
Confidence            45566668888999999999999998744444445          89999999999999876443

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=87.66  E-value=5.4  Score=37.55  Aligned_cols=59  Identities=17%  Similarity=0.208  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhhchhhhhhhhcccCCCceEeeCCeecCCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 021572          193 QLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLT  259 (310)
Q Consensus       193 ~lafvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGGVSllGtlAsllGa~~Ia~va~ll  259 (310)
                      ...+......-.+|+.|+=+|+..||+|        -.|-.|-.-|+||.+.|++++.+++......
T Consensus       134 ~~~l~l~~~vw~~Di~Ayf~Gr~fGk~k--------l~p~iSP~KT~eGfigG~~~~~~v~~~~~~~  192 (265)
T COG0575         134 ILLLLLFLGVWAGDIGAYFVGRRFGKHK--------LAPKISPKKTWEGFIGGALGAVLVAVLVIFL  192 (265)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHcCCCC--------CCCcCCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence            3445555667779999999999999987        2345666789999999999998887765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
3dh4_A	530	Sodium/glucose cotransporter; membrane protein, sy	86.1

>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}

Probab=86.10  E-value=1.5  Score=43.12  Aligned_cols=57  Identities=5%  Similarity=-0.030  Sum_probs=35.8

Q ss_pred             HHHHhhcCCChHHHHHHHHHHHHHHHhh-----ch-------hhHHHHHHHHhhhhhhhhcchhhhhhh
Q 021572           94 GSPILVSGLSPSGIAAAFLLGTLTWRAF-----GP-------SGFLLVATYFIIGTAATKVKMAQKEAQ  150 (310)
Q Consensus        94 ~~~~~~ksLT~sGa~aA~lvG~l~~~~~-----G~-------~g~llLl~FFlssS~~TK~k~~~K~~~  150 (310)
                      ..++.-|..|..|++++.++|.+++...     .+       .++.+-+..++..|++||=+.+++++.
T Consensus       414 llgl~wkr~~~~gA~~g~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~vSl~t~~~~~~~~~~  482 (530)
T 3dh4_A          414 LLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGI  482 (530)
T ss_dssp             HHHHHCTTCCHHHHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCSSSSCTTCC
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhcCCCccccccc
Confidence            3555567799999999999998764321     11       112333345666788887666555443

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00