Citrus Sinensis ID: 021662


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MMAKNLEATINVTTASESFSVSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE
ccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccc
ccHHHcEEEEEEEcccccEEEcccccccccccccccccHHHHHccccEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccHEEHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccc
MMAKNLEATINVTtasesfsvslppiaelpfpvksiggnesvrqcHGVLYDAALVVPTVLFVLYLVVHAKKNLtklcngrsYIMISYYALLWLACVLNLAWcslqgwqcsagKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGfplfidvdsthrmKWGFWIIHELLLTAVYGFILFVHFSkwreklpsrpafyHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFlldnayysemkdagffdadwe
MMAKNLEATINVTtasesfsvslppIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE
MMAKNLEATINVTTASESFSVSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYvvvmfvvsavaflvvslAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE
********************VSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFD****
*********I*********************PVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAG*******
MMAKNLEATINVTTASESFSVSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE
**AKNLEATINVTTASESFSVSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDA***
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MMAKNLEATINVTTASESFSVSLPPIAELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q5ZII3364 Transmembrane protein adi yes no 0.770 0.653 0.234 4e-07
Q4V8X0378 Transmembrane protein adi yes no 0.766 0.626 0.252 1e-06
Q791F6369 Transmembrane protein adi yes no 0.737 0.617 0.227 2e-06
Q99MU1369 Transmembrane protein adi yes no 0.737 0.617 0.227 2e-06
Q86W33373 Transmembrane protein adi yes no 0.737 0.611 0.227 2e-05
>sp|Q5ZII3|TPRA1_CHICK Transmembrane protein adipocyte-associated 1 homolog OS=Gallus gallus GN=TPRA1 PE=2 SV=1 Back     alignment and function desciption
 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 31/269 (11%)

Query: 40  ESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNL 99
           E + +     +D  L+VP VLF ++L+        K+    S I  ++Y L+++  ++ +
Sbjct: 46  EDIGKSRVRYWDLLLLVPNVLFFMFLLWKLPSARAKIRVTSSPIFTTFYILVFVVALVGI 105

Query: 100 AWCSLQ-----GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLART 154
           A   +          +   ++ W +   F +A  L + I  +AF   ES +S    LA T
Sbjct: 106 ARAVVSMTVSASDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSVKRVLAIT 165

Query: 155 FIISGIIVGVDMLLKVIY-----------VFGFGFPLFIDVDSTHRMKWGFWIIHELLLT 203
            ++S         L+++Y           ++G G          H     FW+       
Sbjct: 166 AVLSLAYSVTQGTLEILYPDAHLSAEDFNIYGHG--------GRH-----FWLASSCFFF 212

Query: 204 AVYGFILFVHFSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNL 261
            VY F++ +  +  +++  LPSR +FY Y  ++ V++ V  L  +L       G+   + 
Sbjct: 213 LVYSFVVILPKTPLKDRISLPSRKSFYVYAGILAVLNLVQGLGSALLCVDIIEGLCCVDA 272

Query: 262 TVICYHSLYLPLLYATFLADFFQEENFLL 290
           T   Y S + PL+Y  FL  FF  E  +L
Sbjct: 273 TTFLYFSFFAPLIYVAFLKGFFGSEPKIL 301





Gallus gallus (taxid: 9031)
>sp|Q4V8X0|TPRA1_DANRE Transmembrane protein adipocyte-associated 1 homolog OS=Danio rerio GN=tpra1 PE=2 SV=1 Back     alignment and function description
>sp|Q791F6|TPRA1_RAT Transmembrane protein adipocyte-associated 1 OS=Rattus norvegicus GN=Tpra1 PE=2 SV=1 Back     alignment and function description
>sp|Q99MU1|TPRA1_MOUSE Transmembrane protein adipocyte-associated 1 OS=Mus musculus GN=Tpra1 PE=2 SV=1 Back     alignment and function description
>sp|Q86W33|TPRA1_HUMAN Transmembrane protein adipocyte-associated 1 OS=Homo sapiens GN=TPRA1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
449439309303 PREDICTED: uncharacterized protein LOC10 0.938 0.957 0.631 1e-104
255542446308 conserved hypothetical protein [Ricinus 0.860 0.863 0.625 5e-99
388517393283 unknown [Lotus japonicus] 0.854 0.932 0.715 1e-98
18397089300 uncharacterized protein [Arabidopsis tha 0.928 0.956 0.569 2e-98
356533617294 PREDICTED: uncharacterized protein LOC10 0.906 0.952 0.612 3e-98
356562617294 PREDICTED: uncharacterized protein LOC10 0.919 0.965 0.637 3e-98
388519881297 unknown [Medicago truncatula] 0.896 0.932 0.604 6e-98
388514967297 unknown [Medicago truncatula] 0.896 0.932 0.604 7e-98
225451126310 PREDICTED: uncharacterized protein LOC10 0.944 0.941 0.588 8e-98
356576747295 PREDICTED: uncharacterized protein LOC10 0.899 0.942 0.602 2e-96
>gi|449439309|ref|XP_004137428.1| PREDICTED: uncharacterized protein LOC101222221 [Cucumis sativus] Back     alignment and taxonomy information
 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/296 (63%), Positives = 230/296 (77%), Gaps = 6/296 (2%)

Query: 18  SFSVSLPPI----AELPFPVKSIGGNESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNL 73
           S S +L PI    ++L   V+ +    S   CHG+ Y A LV P+VLF +YL + A +N+
Sbjct: 10  SSSDALSPIGSFSSQLNGDVRGLTAASS--GCHGMWYSALLVAPSVLFAIYLAISAIRNI 67

Query: 74  TKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEI 133
            K   GRS+IMISYYALLW+  +LNLAWCSLQ W+CS GK+  WNLLSLFT++ +L+LEI
Sbjct: 68  KKFFLGRSFIMISYYALLWITTLLNLAWCSLQEWECSPGKKFLWNLLSLFTLSGMLFLEI 127

Query: 134 SLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDSTHRMKWG 193
           SL+AFLL+ +Y+ G+E L   FI+SG +VGVD+LLKVIYVFGFG PLFI V S+H  KWG
Sbjct: 128 SLVAFLLKANYSGGMEALLHNFIVSGTLVGVDVLLKVIYVFGFGIPLFIGVGSSHWSKWG 187

Query: 194 FWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAA 253
            W IH+LLLTA YGFILFVHFSKWR+KLP RP+FY+Y+ VMFVVSA+AF    L+  G  
Sbjct: 188 VWTIHKLLLTAAYGFILFVHFSKWRDKLPPRPSFYNYIAVMFVVSALAFFASGLSAFGVR 247

Query: 254 FGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE 309
           FGIWLYN TVI YHS+YLP LY TFLADFFQEE+FLL+NAYYSEM+DAGFFD++W+
Sbjct: 248 FGIWLYNFTVISYHSMYLPFLYVTFLADFFQEEDFLLENAYYSEMRDAGFFDSEWD 303




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542446|ref|XP_002512286.1| conserved hypothetical protein [Ricinus communis] gi|223548247|gb|EEF49738.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|388517393|gb|AFK46758.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|18397089|ref|NP_566244.1| uncharacterized protein [Arabidopsis thaliana] gi|15028251|gb|AAK76714.1| unknown protein [Arabidopsis thaliana] gi|332640654|gb|AEE74175.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356533617|ref|XP_003535358.1| PREDICTED: uncharacterized protein LOC100783991 [Glycine max] Back     alignment and taxonomy information
>gi|356562617|ref|XP_003549566.1| PREDICTED: uncharacterized protein LOC100797540 [Glycine max] Back     alignment and taxonomy information
>gi|388519881|gb|AFK48002.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388514967|gb|AFK45545.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|225451126|ref|XP_002269068.1| PREDICTED: uncharacterized protein LOC100264088 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576747|ref|XP_003556491.1| PREDICTED: uncharacterized protein LOC100819854 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
TAIR|locus:2114835300 Cand2 "AT3G05010" [Arabidopsis 0.928 0.956 0.558 6.3e-92
TAIR|locus:2181231297 Cand8 "AT5G27210" [Arabidopsis 0.928 0.966 0.561 1.1e-89
MGI|MGI:1345190369 Tpra1 "transmembrane protein, 0.805 0.674 0.223 4.7e-09
RGD|620858369 Tpra1 "transmembrane protein, 0.805 0.674 0.223 4.7e-09
WB|WBGene00008366 458 tpra-1 [Caenorhabditis elegans 0.731 0.493 0.236 1.3e-08
UNIPROTKB|Q5ZII3364 TPRA1 "Transmembrane protein a 0.896 0.760 0.222 1.4e-08
UNIPROTKB|Q86W33373 TPRA1 "Transmembrane protein a 0.773 0.640 0.225 1.4e-08
ZFIN|ZDB-GENE-050913-64378 zgc:114103 "zgc:114103" [Danio 0.789 0.645 0.240 2.5e-08
TAIR|locus:2114835 Cand2 "AT3G05010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 166/297 (55%), Positives = 211/297 (71%)

Query:    23 LPPIAELPFPVKSIGGNES---------VRQCHGVLYDAALVVPTVLFVLYLVVHAKKNL 73
             L  IAE PF +  +  + +         V +CHG L++  LV+ ++LFV YL   AKK+L
Sbjct:     4 LSEIAESPFVISRLSPDSTATGGFIGGWVGKCHGFLHNTVLVLASILFVAYLAYEAKKSL 63

Query:    74 TKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAGKEVAWNLLSLFTVAAVLYLEI 133
             +KL N RSYIMI+YY  LWL  +LNLAWC LQ W+C+ GKEV WNLL+LFT + +L+LE+
Sbjct:    64 SKLSNRRSYIMIAYYGFLWLVSLLNLAWCCLQAWECTPGKEVIWNLLTLFTTSGMLFLEV 123

Query:   134 SLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFGFPLFIDVDS-THRMKW 192
             SL+AFL Q +YASG E L RTF+ISG+++G+D+LLK IY+FGFG PLFID +   H+ KW
Sbjct:   124 SLVAFLFQGNYASGAEALTRTFLISGLVIGLDLLLKAIYLFGFGVPLFIDNNEHIHKFKW 183

Query:   193 GFWIIHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYXXXXXXXXXXXXXXXXXAGTGA 252
             G W+IH+LLL  +YG I F++ SKWRE+LP+RPAFY Y                    GA
Sbjct:   184 GLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALNGLSLFACALTANGA 243

Query:   253 AFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDAGFFDADWE 309
              FG+WLY +T +CYH+ YLPLLY TFLADFFQEE+  L+N YYSEMKDAGFFDADWE
Sbjct:   244 HFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEMKDAGFFDADWE 300




GO:0003674 "molecular_function" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0016020 "membrane" evidence=ISS
GO:0002237 "response to molecule of bacterial origin" evidence=IEP
GO:0010015 "root morphogenesis" evidence=IMP
TAIR|locus:2181231 Cand8 "AT5G27210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1345190 Tpra1 "transmembrane protein, adipocyte asscociated 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|620858 Tpra1 "transmembrane protein, adipocyte asscociated 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00008366 tpra-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZII3 TPRA1 "Transmembrane protein adipocyte-associated 1 homolog" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q86W33 TPRA1 "Transmembrane protein adipocyte-associated 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-64 zgc:114103 "zgc:114103" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
AT3G05010
transmembrane protein, putative; transmembrane protein, putative; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function, transmembrane-40 (InterPro-IPR018781); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G27210.1); Has 103 Blast hits to 103 proteins in 34 species- Archae - 0; Bacteria - 4; Metazoa - 71; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink). (300 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
GP_ALPHA_1
GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transdu [...] (383 aa)
      0.862
AT3G59090
unknown protein; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; BEST Ar [...] (373 aa)
       0.746
AT5G42090
unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 24 plant [...] (439 aa)
       0.746
AT5G18520
unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 24 plant [...] (440 aa)
       0.746
AT3G09570
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (439 aa)
       0.746
AT2G36630
unknown protein; unknown protein; INVOLVED IN- N-terminal protein myristoylation; LOCATED IN- e [...] (459 aa)
       0.742
AT1G52780
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (1059 aa)
       0.742
AT5G02630
unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 21 plant [...] (428 aa)
       0.718
MLO13
MLO13 (MILDEW RESISTANCE LOCUS O 13); calmodulin binding; A member of a large family of seven-t [...] (478 aa)
       0.679
MLO9
MLO9 (MILDEW RESISTANCE LOCUS O 9); calmodulin binding; A member of a large family of seven-tra [...] (460 aa)
       0.625

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
pfam10160261 pfam10160, Tmemb_40, Predicted membrane protein 8e-78
>gnl|CDD|220606 pfam10160, Tmemb_40, Predicted membrane protein Back     alignment and domain information
 Score =  237 bits (607), Expect = 8e-78
 Identities = 111/264 (42%), Positives = 163/264 (61%), Gaps = 11/264 (4%)

Query: 40  ESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNL 99
             V       +D  L+ P +LF+++L         KL  GRS I+I++Y LLWL  ++N+
Sbjct: 2   RWVGGSRVRYWDTVLLAPNLLFLVFLAWKLGSAFAKLRTGRSPIVIAFYGLLWLVALVNI 61

Query: 100 AWCSLQGWQCSAGK-----EVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLART 154
           A C+L   + +  K     +V WN+L  F    +L+LE+S++ F LQ  + S   ++ R 
Sbjct: 62  ARCALSMTESTPDKAATVDQVLWNILRFF----LLFLELSVIIFGLQFGHLSSKSSITRV 117

Query: 155 FIISGIIVGVDMLLKVIYVFGFG-FPLFID-VDSTHRMKWGFWIIHELLLTAVYGFILFV 212
            +I+G++  +D LL+VI  FGFG   LFID  D      WGFW+ H L+LT VYGFIL +
Sbjct: 118 LLITGLVSALDTLLQVILEFGFGGVSLFIDNFDIGGHGGWGFWVAHSLVLTLVYGFILIL 177

Query: 213 HFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLP 272
           + S+WRE+LP++P+FY+Y  +M +++ +  +  +L   GA FG+ LY +T  CY +LYLP
Sbjct: 178 YHSRWRERLPAKPSFYNYCGIMALLNVLQLVGSALIANGAGFGLCLYGVTTFCYFALYLP 237

Query: 273 LLYATFLADFFQEENFLLDNAYYS 296
           LLY TFLADFFQEE+  L N YYS
Sbjct: 238 LLYVTFLADFFQEEDLHLPNVYYS 261


This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown. Length = 261

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
PF10160261 Tmemb_40: Predicted membrane protein; InterPro: IP 100.0
KOG4536347 consensus Predicted membrane protein [Function unk 100.0
>PF10160 Tmemb_40: Predicted membrane protein; InterPro: IPR018781 This entry represents 280 amino acid region found in a group of proteins conserved from plants to humans Back     alignment and domain information
Probab=100.00  E-value=1.4e-103  Score=728.82  Aligned_cols=257  Identities=42%  Similarity=0.766  Sum_probs=251.0

Q ss_pred             cccccccceehhhHHHhhHHHHHHHHHHhhhhhhhccccCCchHHHHHHHHHHHHHHHHHHHhHhhcccccCc-hhHHHH
Q 021662           40 ESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQGWQCSAG-KEVAWN  118 (309)
Q Consensus        40 ~w~~~c~g~~wDv~LlvPn~LFllFL~~~~~~s~~KL~~t~SpI~~tyY~ll~~v~llnl~rc~vsm~~~t~~-~~~~wn  118 (309)
                      +|+++|||++||+++++||++|++||++|+||+++|||+||||||+|||+++|+++++|++||++|||||+|+ ++++||
T Consensus         2 ~~~~~~~v~~~d~~l~vPn~lFllfL~~~~~~s~~KL~~~~SpI~~tyY~llw~v~llnl~rc~vsm~~~~~~~~~~~d~   81 (261)
T PF10160_consen    2 RWIGGSRVRIWDVVLLVPNLLFLLFLAWRLRKSRRKLRHTRSPIFITYYALLWVVALLNLARCFVSMWVCSPGKGGIADK   81 (261)
T ss_pred             cccccCceEehHHHHHHHHHHHHHHHHHhchHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHH
Confidence            5999999999999999999999999999999999999999999999999999999999999999999999875 589999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cceeecCC-CCCCccchhHH
Q 021662          119 LLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGVDMLLKVIYVFGFG-FPLFIDVD-STHRMKWGFWI  196 (309)
Q Consensus       119 iLwl~trf~lL~lEvSvvvFgl~g~~~~s~~sl~Rtl~iS~lia~~d~l~kaiy~f~~g-vplf~~~~-~~~hgg~~FW~  196 (309)
                      ++|+++||+||++|+||++||+||||+|||||||||+++|++++++|+++|++|+|++| +|++.+++ .++||||+||+
T Consensus        82 ~lW~ilrfflL~lEvSvvvFgL~fghlds~~Si~r~l~iT~~is~~~s~~Q~ilef~~~d~~l~~~~~~~~~hgg~~fW~  161 (261)
T PF10160_consen   82 VLWNILRFFLLSLEVSVVVFGLQFGHLDSRSSIKRTLLITGLISLADSLTQAILEFGFGDVPLFIENFDLFGHGGWGFWF  161 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHheeecCcccccCCCCCcCCcCCeehHH
Confidence            99999999999999999999999999999999999999999999999999999999999 89998765 44589999999


Q ss_pred             HHHHHHHHHHHHHHHhccccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCcceeEEechhhHHHHHhhhHHHHH
Q 021662          197 IHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYA  276 (309)
Q Consensus       197 ~ss~~f~lVY~~I~~LP~t~~rerLPar~SFY~Yv~iL~lLN~~q~~Gs~Ll~~~~~~GlClvd~Tt~~Yfaly~PLlY~  276 (309)
                      +||++|++||++|++||++|||+|||+|||||+||++|++||++|++||+|+++|+++|+|+||+|+++|||+|+|++|+
T Consensus       162 ~~s~~f~~vY~~I~~L~~~r~r~~LPar~SFY~Y~~~L~~LN~~q~~Gs~Ll~~~~~~Glc~~d~t~~~Yfa~y~PllY~  241 (261)
T PF10160_consen  162 ISSLVFALVYGFILILTPLRWRDRLPARPSFYRYVGILFLLNLLQSIGSGLLGYGASFGLCLVDLTTFLYFALYPPLLYV  241 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEeccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcccccccchhhhh
Q 021662          277 TFLADFFQEENFLLDNAYYS  296 (309)
Q Consensus       277 TFLadFF~~e~~~~~~~yYS  296 (309)
                      |||||||||||.|+||.|||
T Consensus       242 TFL~~fF~~~d~~L~~~Yys  261 (261)
T PF10160_consen  242 TFLADFFQEEDVHLENVYYS  261 (261)
T ss_pred             HHHHHHhCccccCCCCCCCC
Confidence            99999999999999999997



These are predicted to be membrane proteins, but apart from that their function is unknown.

>KOG4536 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00