Citrus Sinensis ID: 021706

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccHHHHcccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEccccccccccccHEHHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mrvldqiaqspfplialsqnpnyssssivkggsffgSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKksfsklsngRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFqgnyasgpeaLARTFGISGLVVGLDIILKAVYLFgfgiplfidsngqsphvkwGLWVVHRLVLTAVYGIILFMYHSKwrerlparpafYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYsemkdagffdadwe
Flexible Loop (DISEMBL)
MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE
Low Complexity Region (SEG)
MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE
Disordered region (IsUnstruct)
**************I***********SIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFD****
Disordered Region (DISOPRED)
********************************SFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDA*W*
Disordered Region (DISEMBL)
MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE
Disordered Region (DISPRO)
**********PFPL*ALSQN*************FFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDA***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	309	2.2.26 [Sep-21-2011]
Q791F6	369	Transmembrane protein adi	yes	no	0.737	0.617	0.245	3e-07
Q99MU1	369	Transmembrane protein adi	yes	no	0.737	0.617	0.245	3e-07
Q4V8X0	378	Transmembrane protein adi	yes	no	0.724	0.592	0.234	9e-07
Q86W33	373	Transmembrane protein adi	yes	no	0.737	0.611	0.237	9e-06
Q5ZII3	364	Transmembrane protein adi	yes	no	0.737	0.626	0.217	2e-05

>sp|Q791F6|TPRA1_RAT Transmembrane protein adipocyte-associated 1 OS=Rattus norvegicus GN=Tpra1 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 20/248 (8%)

Query: 52  NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQ-AWEC 110
           +++L++ +V F ++L ++   + +K+    S I I +Y  +++V+L+ +A   +      
Sbjct: 44  DLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVSA 103

Query: 111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILK 170
           +    VA  IL   T+  +L +E+S++       +     ++ R   I+        +L 
Sbjct: 104 SDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAIT-------TVLS 156

Query: 171 AVYLFGFGI--PLFIDSNGQSP------HVKWGLWVVHRLVLTAVYGIILFMYHSKWRER 222
             Y    G    L+ DS+  +       H     W+V       VY +++ +  +  +ER
Sbjct: 157 LAYSVTQGTLEILYPDSHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKER 216

Query: 223 --LPARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTF 278
             LP+R +FY Y  I+  LN L      L  A+   G      T   Y +F+ PLIYV F
Sbjct: 217 VSLPSRRSFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFAPLIYVAF 276

Query: 279 LADFFQEE 286
           L  FF  E
Sbjct: 277 LRGFFGSE 284

Rattus norvegicus (taxid: 10116)

>sp|Q99MU1|TPRA1_MOUSE Transmembrane protein adipocyte-associated 1 OS=Mus musculus GN=Tpra1 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 20/248 (8%)

Query: 52  NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQ-AWEC 110
           +++L++ +V F ++L ++   + +K+    S I I +Y  +++V+L+ +A   +      
Sbjct: 44  DLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVSA 103

Query: 111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILK 170
           +    VA  IL   T+  +L +E+S++       +     ++ R   I+        +L 
Sbjct: 104 SDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAIT-------TVLS 156

Query: 171 AVYLFGFGI--PLFIDSNGQSP------HVKWGLWVVHRLVLTAVYGIILFMYHSKWRER 222
             Y    G    L+ DS+  +       H     W+V       VY +++ +  +  +ER
Sbjct: 157 LAYSVTQGTLEILYPDSHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKER 216

Query: 223 --LPARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTF 278
             LP+R +FY Y  I+  LN L      L  A+   G      T   Y +F+ PLIYV F
Sbjct: 217 VSLPSRRSFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFAPLIYVAF 276

Query: 279 LADFFQEE 286
           L  FF  E
Sbjct: 277 LRGFFGSE 284

Mus musculus (taxid: 10090)

>sp|Q4V8X0|TPRA1_DANRE Transmembrane protein adipocyte-associated 1 homolog OS=Danio rerio GN=tpra1 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 28/252 (11%)

Query: 52  NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECT 111
           +V+L++ +V F+++L ++   + +K+    S I +A+Y  +++V+ + +    +     T
Sbjct: 60  DVMLLIPNVAFLVFLMWKLPSARAKIRLTSSPIFVAFYILVFVVAAVGITRAIVSMTVST 119

Query: 112 RG-----KEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLD 166
                   +V W I   F    +L +E+S++       +     ++ R   I+       
Sbjct: 120 SSAATLIDKVLWEITRFF----LLAIELSVIILGLAFGHLESKSSIKRVLAITA------ 169

Query: 167 IILKAVYLFGFGI--PLFIDSNGQSP------HVKWGLWVVHRLVLTAVYGIILFMYHSK 218
            +L   Y    G     F D +  +       H     W+        VY +I+ +  + 
Sbjct: 170 -VLSLAYSITQGTLEIRFPDKHLSAKDFNIYGHGGRHFWLASSCFFFLVYSLIVILPKTP 228

Query: 219 WRER--LPARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLI 274
            RER  LP++ +FY Y  I+ +LN +      L  A    G     VT   Y + + PLI
Sbjct: 229 IRERISLPSKRSFYVYSGILALLNLVQGLGSALLCADIIEGLCCVDVTTFLYFSVFAPLI 288

Query: 275 YVTFLADFFQEE 286
           YVTFL  FF  E
Sbjct: 289 YVTFLKGFFGSE 300

Danio rerio (taxid: 7955)

>sp|Q86W33|TPRA1_HUMAN Transmembrane protein adipocyte-associated 1 OS=Homo sapiens GN=TPRA1 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 20/248 (8%)

Query: 52  NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECT 111
           +++L++ +V F+++L ++   + +K+    S I I +Y  +++V+L+ +A   +     T
Sbjct: 47  DLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVST 106

Query: 112 -RGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVV------- 163
                VA  IL   T+  +L +E+S++       +     ++ R   I+ ++        
Sbjct: 107 SNAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQ 166

Query: 164 -GLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER 222
             L+I+    +L      ++     Q        W+V       VY +++ +  +  +ER
Sbjct: 167 GTLEILYPDAHLSAEDFNIYGHGGRQ-------FWLVSSCFFFLVYSLVVILPKTPLKER 219

Query: 223 --LPARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTF 278
             LP+R +FY Y  I+ +LN L     VL       G      T   Y +F+ PLIYV F
Sbjct: 220 ISLPSRRSFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAF 279

Query: 279 LADFFQEE 286
           L  FF  E
Sbjct: 280 LRGFFGSE 287

Homo sapiens (taxid: 9606)

>sp|Q5ZII3|TPRA1_CHICK Transmembrane protein adipocyte-associated 1 homolog OS=Gallus gallus GN=TPRA1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 20/248 (8%)

Query: 52  NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQ-AWEC 110
           +++L+V +V F ++L ++   + +K+    S I   +Y  +++V+L+ +A   +      
Sbjct: 57  DLLLLVPNVLFFMFLLWKLPSARAKIRVTSSPIFTTFYILVFVVALVGIARAVVSMTVSA 116

Query: 111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVV------- 163
           +    VA  IL   T+  +L +E+S++       +     ++ R   I+ ++        
Sbjct: 117 SDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSVKRVLAITAVLSLAYSVTQ 176

Query: 164 -GLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER 222
             L+I+    +L      ++        H     W+        VY  ++ +  +  ++R
Sbjct: 177 GTLEILYPDAHLSAEDFNIY-------GHGGRHFWLASSCFFFLVYSFVVILPKTPLKDR 229

Query: 223 --LPARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTF 278
             LP+R +FY Y  I+ +LN +      L       G      T   Y +F+ PLIYV F
Sbjct: 230 ISLPSRKSFYVYAGILAVLNLVQGLGSALLCVDIIEGLCCVDATTFLYFSFFAPLIYVAF 289

Query: 279 LADFFQEE 286
           L  FF  E
Sbjct: 290 LKGFFGSE 297

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
255542446	308	conserved hypothetical protein [Ricinus	0.987	0.990	0.762	1e-132
224131402	305	predicted protein [Populus trichocarpa]	0.941	0.954	0.764	1e-128
18397089	300	uncharacterized protein [Arabidopsis tha	0.964	0.993	0.713	1e-125
224123298	281	predicted protein [Populus trichocarpa]	0.899	0.989	0.782	1e-125
297829018	311	predicted protein [Arabidopsis lyrata su	0.964	0.958	0.698	1e-123
12322847	311	unknown protein; 15342-13483 [Arabidopsi	0.964	0.958	0.689	1e-122
225451126	310	PREDICTED: uncharacterized protein LOC10	0.996	0.993	0.726	1e-121
15240462	297	uncharacterized protein [Arabidopsis tha	0.954	0.993	0.668	1e-119
388514967	297	unknown [Medicago truncatula]	0.925	0.962	0.706	1e-118
297808805	297	hypothetical protein ARALYDRAFT_489607 [	0.954	0.993	0.659	1e-118

>gi|255542446|ref|XP_002512286.1| conserved hypothetical protein [Ricinus communis] gi|223548247|gb|EEF49738.1| conserved hypothetical protein [Ricinus communis]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/312 (76%), Positives = 266/312 (85%), Gaps = 7/312 (2%)

Query: 1   MRVLD-QIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSS 59
           MR L+ Q   SPF  I +SQNPN   +S +K G F G GL+ WL ECHGFLHNV+LI +S
Sbjct: 1   MRNLELQTQASPFS-IPMSQNPN---NSTLKEGGFVGLGLFNWLYECHGFLHNVILISAS 56

Query: 60  VCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWN 119
           + FVLYL+FQAKK F+KLS+GRS+IMIAYYG LWLVSLL+LAWC  QAWECT GKE+ WN
Sbjct: 57  LAFVLYLAFQAKKCFAKLSHGRSYIMIAYYGILWLVSLLNLAWCFFQAWECTPGKELTWN 116

Query: 120 ILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGI 179
           ILSLFT SGMLFLEVSL+AFL QGNYASG EAL RTF +S L+VGLDI+LKA+Y+FG GI
Sbjct: 117 ILSLFTTSGMLFLEVSLIAFLLQGNYASGLEALTRTFAVSALIVGLDILLKAIYMFGLGI 176

Query: 180 PLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFIL 239
           PLFIDSN Q+ H+KW LWV+HRLVLTAVYG ILFMYHSKWRERLPARPAFYKYI IMF L
Sbjct: 177 PLFIDSNEQTHHMKWSLWVIHRLVLTAVYGFILFMYHSKWRERLPARPAFYKYIVIMFAL 236

Query: 240 NALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSE 297
           NALALFAC L  +GA FG+WLYG+T VCYHAFYLPL++ TFLADFFQEEDL LENVYYSE
Sbjct: 237 NALALFACGLTGHGAGFGFWLYGITIVCYHAFYLPLLHKTFLADFFQEEDLHLENVYYSE 296

Query: 298 MKDAGFFDADWE 309
           MKDAGFFDADWE
Sbjct: 297 MKDAGFFDADWE 308

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131402|ref|XP_002328530.1| predicted protein [Populus trichocarpa] gi|222838245|gb|EEE76610.1| predicted protein [Populus trichocarpa]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/297 (76%), Positives = 254/297 (85%), Gaps = 6/297 (2%)

Query: 15  IALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSF 74
           I +SQNPN    S +K G+F G  L+ WLVECHGFLHN +LI++S+ FV+YL+FQAKKSF
Sbjct: 13  IPISQNPN----STLKEGTFVGPSLFNWLVECHGFLHNAILILTSLAFVIYLAFQAKKSF 68

Query: 75  SKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEV 134
            KLSNGRS IMIAYY  LWLVSLL+ AW C QAWECT GKE++WNILSLFT SGMLFLEV
Sbjct: 69  RKLSNGRSSIMIAYYCSLWLVSLLNFAWSCFQAWECTPGKELSWNILSLFTTSGMLFLEV 128

Query: 135 SLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKW 194
           SL+AFL QGNYASG E L + FG+S L+VGLDI LKAVYLFGFGIPLFIDS+  S  +KW
Sbjct: 129 SLIAFLLQGNYASGLEDLTQPFGVSALIVGLDIFLKAVYLFGFGIPLFIDSSDHSHRMKW 188

Query: 195 GLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVL--NGA 252
            LWV+HRLVLTAVYG+I+FMYHSKWRERLPARPAFY YI+IMFILNALALFAC L  +GA
Sbjct: 189 SLWVIHRLVLTAVYGLIMFMYHSKWRERLPARPAFYNYIAIMFILNALALFACALTGHGA 248

Query: 253 SFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE 309
            FGYWLYG+T VCYHAFYLPL+YVTFLADFFQEE L LENVYYSEMKDAGFFD DW+
Sbjct: 249 GFGYWLYGITIVCYHAFYLPLLYVTFLADFFQEEGLNLENVYYSEMKDAGFFDDDWD 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397089|ref|NP_566244.1| uncharacterized protein [Arabidopsis thaliana] gi|15028251|gb|AAK76714.1| unknown protein [Arabidopsis thaliana] gi|332640654|gb|AEE74175.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 222/311 (71%), Positives = 261/311 (83%), Gaps = 13/311 (4%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MRVL +IA+SPF +  LS  P+ +++     G F G     W+ +CHGFLHN VL+++S+
Sbjct: 1   MRVLSEIAESPFVISRLS--PDSTAT-----GGFIGG----WVGKCHGFLHNTVLVLASI 49

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FV YL+++AKKS SKLSN RS+IMIAYYG LWLVSLL+LAWCCLQAWECT GKEV WN+
Sbjct: 50  LFVAYLAYEAKKSLSKLSNRRSYIMIAYYGFLWLVSLLNLAWCCLQAWECTPGKEVIWNL 109

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISGLV+GLD++LKA+YLFGFG+P
Sbjct: 110 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGLVIGLDLLLKAIYLFGFGVP 169

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
           LFID+N      KWGLWV+H+L+L  +YG+I FMY+SKWRERLPARPAFYKYI++M  LN
Sbjct: 170 LFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALN 229

Query: 241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
            L+LFAC L  NGA FG WLYG+T+VCYHAFYLPL+YVTFLADFFQEEDL LENVYYSEM
Sbjct: 230 GLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEM 289

Query: 299 KDAGFFDADWE 309
           KDAGFFDADWE
Sbjct: 290 KDAGFFDADWE 300

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123298|ref|XP_002319044.1| predicted protein [Populus trichocarpa] gi|222857420|gb|EEE94967.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/280 (78%), Positives = 241/280 (86%), Gaps = 2/280 (0%)

Query: 32  GSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGC 91
           G+F GS +Y WL ECHGFLHN +LIV+S+ FVLYL+F+AKKSF KLSNGRS IMIAYYG 
Sbjct: 2   GTFIGSSVYNWLFECHGFLHNAILIVASLAFVLYLAFKAKKSFGKLSNGRSSIMIAYYGI 61

Query: 92  LWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEA 151
           LWLVSLL+LAW CLQAWECT GKE+ WNILSLFT SGMLFLEVSL+AFL QGNY  G E 
Sbjct: 62  LWLVSLLNLAWSCLQAWECTPGKELVWNILSLFTTSGMLFLEVSLIAFLLQGNYVGGLED 121

Query: 152 LARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGII 211
           L R FG+S L+VGLDI+LKA+YLFGFGIPLFIDSN  S H+KW LW +HRLVLTA+YG I
Sbjct: 122 LTRPFGLSALIVGLDILLKALYLFGFGIPLFIDSNEHSHHMKWSLWAIHRLVLTAIYGSI 181

Query: 212 LFMYHSKWRERLPARPAFYKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAF 269
           LFMYHSKWRERLPARPAFYKYI IMFILNAL+LFA  L  +G  FGYWLY  T VCYHAF
Sbjct: 182 LFMYHSKWRERLPARPAFYKYIVIMFILNALSLFASALTGHGTGFGYWLYSTTIVCYHAF 241

Query: 270 YLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE 309
           YLPL+YVTFLADFFQEEDL LE+VYYSEMKDAGFFD DW+
Sbjct: 242 YLPLLYVTFLADFFQEEDLHLESVYYSEMKDAGFFDDDWD 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829018|ref|XP_002882391.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328231|gb|EFH58650.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/322 (69%), Positives = 261/322 (81%), Gaps = 24/322 (7%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MRVL +IA+SPF L  LS  PN +++     G F G     W+ +CHGFLHN VL+++S+
Sbjct: 1   MRVLGEIAESPFLLSRLS--PNSTAT-----GGFIGG----WVGKCHGFLHNTVLVLASI 49

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FV YL+++AKKS SKLSN RS+IMIAYYG LWLVSLL+LAWCCLQAWECT GKEV WN+
Sbjct: 50  LFVAYLAYEAKKSLSKLSNRRSYIMIAYYGFLWLVSLLNLAWCCLQAWECTPGKEVIWNL 109

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISGLV+GLD++LKA+YLFGFG+P
Sbjct: 110 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGLVIGLDLLLKAIYLFGFGVP 169

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLP-----------ARPAF 229
           LFID+N      KWGLWV+H+L+L  +YG+I FMY+SKWRERLP           ARPAF
Sbjct: 170 LFIDNNEHIQKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPGKYIYHSHPPYARPAF 229

Query: 230 YKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEED 287
           YKYI++M  LN L+LFAC L  NGA FG WLYGVT+VCYHAFYLPL+YVTFLADFFQEED
Sbjct: 230 YKYITVMLALNGLSLFACALTANGAHFGLWLYGVTSVCYHAFYLPLLYVTFLADFFQEED 289

Query: 288 LRLENVYYSEMKDAGFFDADWE 309
           L LENVYYSEMKDAGFFDADWE
Sbjct: 290 LNLENVYYSEMKDAGFFDADWE 311

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322847|gb|AAG51409.1|AC009465_9 unknown protein; 15342-13483 [Arabidopsis thaliana]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/322 (68%), Positives = 261/322 (81%), Gaps = 24/322 (7%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MRVL +IA+SPF +  LS  P+ +++     G F G     W+ +CHGFLHN VL+++S+
Sbjct: 1   MRVLSEIAESPFVISRLS--PDSTAT-----GGFIGG----WVGKCHGFLHNTVLVLASI 49

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FV YL+++AKKS SKLSN RS+IMIAYYG LWLVSLL+LAWCCLQAWECT GKEV WN+
Sbjct: 50  LFVAYLAYEAKKSLSKLSNRRSYIMIAYYGFLWLVSLLNLAWCCLQAWECTPGKEVIWNL 109

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISGLV+GLD++LKA+YLFGFG+P
Sbjct: 110 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGLVIGLDLLLKAIYLFGFGVP 169

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLP-----------ARPAF 229
           LFID+N      KWGLWV+H+L+L  +YG+I FMY+SKWRERLP           ARPAF
Sbjct: 170 LFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPGEYIDHSYPPYARPAF 229

Query: 230 YKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEED 287
           YKYI++M  LN L+LFAC L  NGA FG WLYG+T+VCYHAFYLPL+YVTFLADFFQEED
Sbjct: 230 YKYITVMLALNGLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEED 289

Query: 288 LRLENVYYSEMKDAGFFDADWE 309
           L LENVYYSEMKDAGFFDADWE
Sbjct: 290 LNLENVYYSEMKDAGFFDADWE 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451126|ref|XP_002269068.1| PREDICTED: uncharacterized protein LOC100264088 [Vitis vinifera]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/311 (72%), Positives = 258/311 (82%), Gaps = 3/311 (0%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MR L+ +A+SP   +          +  +K G++ G   Y WL ECHGF HNV LIV S 
Sbjct: 1   MRSLEGVAESPLSTVLNLTLQEEKYNLTLKEGNY-GPRFYGWLFECHGFWHNVALIVPSA 59

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FVLYL FQA+KSF+KL++GRS+IMI+YYGCLWLVSLL+LAWC LQAWECT  K VAWN+
Sbjct: 60  LFVLYLGFQARKSFTKLTHGRSYIMISYYGCLWLVSLLNLAWCSLQAWECTPEKAVAWNV 119

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           LSLFT SGMLFLEVSL+AFL QGNYASG EAL RTF +SGL++GLD++LK +YLFGFG+P
Sbjct: 120 LSLFTTSGMLFLEVSLVAFLLQGNYASGLEALTRTFVVSGLIIGLDLLLKVIYLFGFGVP 179

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
           LFID+N QS  VKWGLWVVH+LVLTAVYG ILFMYHSKWRERLPARPAFYKYI+IM  LN
Sbjct: 180 LFIDNNDQSHRVKWGLWVVHKLVLTAVYGFILFMYHSKWRERLPARPAFYKYITIMCCLN 239

Query: 241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
           ALALFAC L  NGA FG+WLYG+T + YHAFYLPL+Y+TFLADFFQEEDL LENVYYSEM
Sbjct: 240 ALALFACGLTGNGAGFGFWLYGLTMIFYHAFYLPLLYITFLADFFQEEDLHLENVYYSEM 299

Query: 299 KDAGFFDADWE 309
           KDAGFFDADWE
Sbjct: 300 KDAGFFDADWE 310

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240462|ref|NP_198073.1| uncharacterized protein [Arabidopsis thaliana] gi|332006275|gb|AED93658.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/311 (66%), Positives = 251/311 (80%), Gaps = 16/311 (5%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MRVLD+IA+SPF +  L  NPN +++             Y+W+ +CHGFLHN VL+ +S+
Sbjct: 1   MRVLDEIAESPFLISPL--NPNSTANG------------YRWVDKCHGFLHNTVLVAASL 46

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FV YL+++AKKS SKLSN RS+IMIAYYGCLWLVSLL+LAWCCLQ WECT GKEV WN+
Sbjct: 47  FFVAYLAYEAKKSLSKLSNRRSYIMIAYYGCLWLVSLLNLAWCCLQGWECTPGKEVVWNL 106

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISG +V LD++LKA++LFGFG+P
Sbjct: 107 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGFIVALDLLLKAIFLFGFGVP 166

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
           LFID+N      KWGLW++H+L+LT VYG++  MY+S+WRE+LPARPAFY YI IMF L 
Sbjct: 167 LFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALY 226

Query: 241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
           +L L A     N A FG+WLYG+ +VCYHA YLPL+Y+TFLADFFQEEDL LENVYYSEM
Sbjct: 227 SLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEM 286

Query: 299 KDAGFFDADWE 309
           KDAGFFD+DWE
Sbjct: 287 KDAGFFDSDWE 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514967|gb|AFK45545.1| unknown [Medicago truncatula]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/293 (70%), Positives = 243/293 (82%), Gaps = 7/293 (2%)

Query: 19  QNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLS 78
            N + SSSS V        G   W+ ECHGF HN VLI++S  FVLYL+FQA+KSF KL+
Sbjct: 10  TNEDSSSSSGV-----LTKGFTDWVFECHGFWHNAVLIIASFLFVLYLAFQARKSFYKLT 64

Query: 79  NGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLA 138
           NGRS+I+I+YY  LWLVS+L+LAWC  QAWECT GKE+ WN+LSLFT SGMLFLEVSLLA
Sbjct: 65  NGRSYIIISYYASLWLVSILNLAWCFSQAWECTPGKELTWNLLSLFTSSGMLFLEVSLLA 124

Query: 139 FLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWV 198
           FL QGN ASG EAL RTFGISG++VG D++LKA+YLF FG+PLFID++  +P +KW LWV
Sbjct: 125 FLLQGNNASGVEALTRTFGISGIIVGFDVLLKAIYLFAFGVPLFIDTDHGTPRLKWNLWV 184

Query: 199 VHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVL--NGASFGY 256
           +H+LVLT VYG+ILFMYHS+WRERLPARPAFYKY+ IMFILNA+ALFAC L  NGA FG+
Sbjct: 185 IHKLVLTVVYGLILFMYHSRWRERLPARPAFYKYVIIMFILNAIALFACGLTGNGAGFGF 244

Query: 257 WLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEMKDAGFFDADWE 309
           W Y VT V YHAFYLPL+Y+TFLADFFQEED  +ENVYYSEMKDAGFF++DWE
Sbjct: 245 WFYHVTIVSYHAFYLPLLYITFLADFFQEEDFHMENVYYSEMKDAGFFESDWE 297

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808805|ref|XP_002872286.1| hypothetical protein ARALYDRAFT_489607 [Arabidopsis lyrata subsp. lyrata] gi|297318123|gb|EFH48545.1| hypothetical protein ARALYDRAFT_489607 [Arabidopsis lyrata subsp. lyrata]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/311 (65%), Positives = 251/311 (80%), Gaps = 16/311 (5%)

Query: 1   MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
           MRVL++IA+SPF +  L  NPN +++             Y+W+ +CHGFLHN VL+ +S+
Sbjct: 1   MRVLEEIAESPFLISQL--NPNSTANG------------YRWVDKCHGFLHNTVLVAASL 46

Query: 61  CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
            FV+YL+++AKKS SKLSN RS+IMIAYYGCLWLVSLL+LAWCCLQ WECT GK+V WN+
Sbjct: 47  FFVVYLAYEAKKSLSKLSNRRSYIMIAYYGCLWLVSLLNLAWCCLQGWECTPGKQVVWNL 106

Query: 121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
           L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISG +V LD++LKA++LFGFG+P
Sbjct: 107 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGFIVALDLLLKAIFLFGFGVP 166

Query: 181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
           LFID+N      KWGLW++H+L+LT VYG++  MY+S+WRE+LPARPAFY YI IMF L 
Sbjct: 167 LFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALY 226

Query: 241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
           +L L A     N   FG+WLYG+ +VCYHA YLPL+YVTFLADFFQEEDL LENVYYSEM
Sbjct: 227 SLYLVASAFTANSTHFGFWLYGIMSVCYHALYLPLLYVTFLADFFQEEDLNLENVYYSEM 286

Query: 299 KDAGFFDADWE 309
           +DAGFFD+DWE
Sbjct: 287 RDAGFFDSDWE 297

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:2114835	300	Cand2 "AT3G05010" [Arabidopsis	0.964	0.993	0.713	1.7e-121
TAIR|locus:2181231	297	Cand8 "AT5G27210" [Arabidopsis	0.954	0.993	0.675	5e-115
UNIPROTKB|Q86W33	373	TPRA1 "Transmembrane protein a	0.760	0.630	0.236	1.4e-10
MGI|MGI:1345190	369	Tpra1 "transmembrane protein,	0.760	0.636	0.232	1.2e-09
RGD|620858	369	Tpra1 "transmembrane protein,	0.760	0.636	0.232	1.2e-09
ZFIN|ZDB-GENE-050913-64	378	zgc:114103 "zgc:114103" [Danio	0.747	0.611	0.232	1.4e-08
WB|WBGene00008366	458	tpra-1 [Caenorhabditis elegans	0.724	0.489	0.254	2.6e-08
UNIPROTKB|Q5ZII3	364	TPRA1 "Transmembrane protein a	0.760	0.645	0.215	3.6e-08

TAIR|locus:2114835 Cand2 "AT3G05010" [Arabidopsis thaliana (taxid:3702)]

 Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
 Identities = 222/311 (71%), Positives = 261/311 (83%)

Query:     1 MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
             MRVL +IA+SPF +  LS  P+ +++     G F G     W+ +CHGFLHN VL+++S+
Sbjct:     1 MRVLSEIAESPFVISRLS--PDSTAT-----GGFIGG----WVGKCHGFLHNTVLVLASI 49

Query:    61 CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
              FV YL+++AKKS SKLSN RS+IMIAYYG LWLVSLL+LAWCCLQAWECT GKEV WN+
Sbjct:    50 LFVAYLAYEAKKSLSKLSNRRSYIMIAYYGFLWLVSLLNLAWCCLQAWECTPGKEVIWNL 109

Query:   121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
             L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISGLV+GLD++LKA+YLFGFG+P
Sbjct:   110 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGLVIGLDLLLKAIYLFGFGVP 169

Query:   181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
             LFID+N      KWGLWV+H+L+L  +YG+I FMY+SKWRERLPARPAFYKYI++M  LN
Sbjct:   170 LFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALN 229

Query:   241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
              L+LFAC L  NGA FG WLYG+T+VCYHAFYLPL+YVTFLADFFQEEDL LENVYYSEM
Sbjct:   230 GLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEM 289

Query:   299 KDAGFFDADWE 309
             KDAGFFDADWE
Sbjct:   290 KDAGFFDADWE 300

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0002237 "response to molecule of bacterial origin" evidence=IEP

GO:0010015 "root morphogenesis" evidence=IMP

TAIR|locus:2181231 Cand8 "AT5G27210" [Arabidopsis thaliana (taxid:3702)]

 Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
 Identities = 210/311 (67%), Positives = 250/311 (80%)

Query:     1 MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHGFLHNVVLIVSSV 60
             MRVLD+IA+SPF +  L  NPN    S   G        Y+W+ +CHGFLHN VL+ +S+
Sbjct:     1 MRVLDEIAESPFLISPL--NPN----STANG--------YRWVDKCHGFLHNTVLVAASL 46

Query:    61 CFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGKEVAWNI 120
              FV YL+++AKKS SKLSN RS+IMIAYYGCLWLVSLL+LAWCCLQ WECT GKEV WN+
Sbjct:    47 FFVAYLAYEAKKSLSKLSNRRSYIMIAYYGCLWLVSLLNLAWCCLQGWECTPGKEVVWNL 106

Query:   121 LSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLDIILKAVYLFGFGIP 180
             L+LFT SGMLFLEVSL+AFLFQGNYASG EAL RTF ISG +V LD++LKA++LFGFG+P
Sbjct:   107 LTLFTTSGMLFLEVSLVAFLFQGNYASGAEALTRTFLISGFIVALDLLLKAIFLFGFGVP 166

Query:   181 LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILN 240
             LFID+N      KWGLW++H+L+LT VYG++  MY+S+WRE+LPARPAFY YI IMF L 
Sbjct:   167 LFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALY 226

Query:   241 ALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVYYSEM 298
             +L L A     N A FG+WLYG+ +VCYHA YLPL+Y+TFLADFFQEEDL LENVYYSEM
Sbjct:   227 SLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEM 286

Query:   299 KDAGFFDADWE 309
             KDAGFFD+DWE
Sbjct:   287 KDAGFFDSDWE 297

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

UNIPROTKB|Q86W33 TPRA1 "Transmembrane protein adipocyte-associated 1" [Homo sapiens (taxid:9606)]

 Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 57/241 (23%), Positives = 109/241 (45%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECT 111
             +++L++ +V F+++L ++   + +K+    S I I +Y  +++V+L+ +A   +     T
Sbjct:    47 DLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVST 106

Query:   112 -RGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLV-VGLDIIL 169
                  VA  IL   T+  +L +E+S++       +     ++ R   I+ ++ +   +  
Sbjct:   107 SNAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQ 166

Query:   170 KAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER--LPARP 227
               + +      L  +      H     W+V       VY +++ +  +  +ER  LP+R 
Sbjct:   167 GTLEILYPDAHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRR 226

Query:   228 AFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTFLADFFQE 285
             +FY Y  I+ +LN L     VL       G      T   Y +F+ PLIYV FL  FF  
Sbjct:   227 SFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGS 286

Query:   286 E 286
             E
Sbjct:   287 E 287

GO:0016021 "integral to membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=TAS

GO:0006629 "lipid metabolic process" evidence=TAS

GO:0007568 "aging" evidence=TAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

MGI|MGI:1345190 Tpra1 "transmembrane protein, adipocyte asscociated 1" [Mus musculus (taxid:10090)]

 Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 56/241 (23%), Positives = 108/241 (44%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAW-EC 110
             +++L++ +V F ++L ++   + +K+    S I I +Y  +++V+L+ +A   +      
Sbjct:    44 DLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVSA 103

Query:   111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLV-VGLDIIL 169
             +    VA  IL   T+  +L +E+S++       +     ++ R   I+ ++ +   +  
Sbjct:   104 SDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQ 163

Query:   170 KAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER--LPARP 227
               + +      L  +      H     W+V       VY +++ +  +  +ER  LP+R 
Sbjct:   164 GTLEILYPDSHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERVSLPSRR 223

Query:   228 AFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTFLADFFQE 285
             +FY Y  I+  LN L      L  A+   G      T   Y +F+ PLIYV FL  FF  
Sbjct:   224 SFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFAPLIYVAFLRGFFGS 283

Query:   286 E 286
             E
Sbjct:   284 E 284

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|620858 Tpra1 "transmembrane protein, adipocyte asscociated 1" [Rattus norvegicus (taxid:10116)]

 Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 56/241 (23%), Positives = 108/241 (44%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAW-EC 110
             +++L++ +V F ++L ++   + +K+    S I I +Y  +++V+L+ +A   +      
Sbjct:    44 DLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVSA 103

Query:   111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLV-VGLDIIL 169
             +    VA  IL   T+  +L +E+S++       +     ++ R   I+ ++ +   +  
Sbjct:   104 SDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQ 163

Query:   170 KAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER--LPARP 227
               + +      L  +      H     W+V       VY +++ +  +  +ER  LP+R 
Sbjct:   164 GTLEILYPDSHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERVSLPSRR 223

Query:   228 AFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTFLADFFQE 285
             +FY Y  I+  LN L      L  A+   G      T   Y +F+ PLIYV FL  FF  
Sbjct:   224 SFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFAPLIYVAFLRGFFGS 283

Query:   286 E 286
             E
Sbjct:   284 E 284

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050913-64 zgc:114103 "zgc:114103" [Danio rerio (taxid:7955)]

 Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 57/245 (23%), Positives = 105/245 (42%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECT 111
             +V+L++ +V F+++L ++   + +K+    S I +A+Y  +++V+ + +    +     T
Sbjct:    60 DVMLLIPNVAFLVFLMWKLPSARAKIRLTSSPIFVAFYILVFVVAAVGITRAIVSMTVST 119

Query:   112 RGK-----EVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLVVGLD 166
                     +V W I   F    +L +E+S++       +     ++ R   I+ ++    
Sbjct:   120 SSAATLIDKVLWEITRFF----LLAIELSVIILGLAFGHLESKSSIKRVLAITAVLSLAY 175

Query:   167 IILKAVYLFGFGIP-LFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER--L 223
              I +      F    L         H     W+        VY +I+ +  +  RER  L
Sbjct:   176 SITQGTLEIRFPDKHLSAKDFNIYGHGGRHFWLASSCFFFLVYSLIVILPKTPIRERISL 235

Query:   224 PARPAFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTFLAD 281
             P++ +FY Y  I+ +LN +      L  A    G     VT   Y + + PLIYVTFL  
Sbjct:   236 PSKRSFYVYSGILALLNLVQGLGSALLCADIIEGLCCVDVTTFLYFSVFAPLIYVTFLKG 295

Query:   282 FFQEE 286
             FF  E
Sbjct:   296 FFGSE 300

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

WB|WBGene00008366 tpra-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 61/240 (25%), Positives = 105/240 (43%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQ-AWEC 110
             + V++V ++ F+L+L  +      KL  G S ++ A+   +++ +L+++  C        
Sbjct:    79 DAVILVPNILFLLFLILKCGSVIRKLRTGNSPVLRAFTLLVYVSTLVNIIRCAYSMTLSM 138

Query:   111 TRGKEVAWN-ILSLFTKSGMLFLEVSLLAF-LFQGNYASGPEALARTFG---ISGLVVGL 165
             T G E   +  L +  K   L  E   L F L  G+  +G   L    G   +S     +
Sbjct:   139 TDGLEQTVDQTLWIIIKFFYLTAEFCALTFGLLFGHLDNGKSILIALLGTLLVSIPHTAV 198

Query:   166 DIILKAVYLFGFGIPL-FIDSNGQSPHVKWGLWVVHRLVLTAVYGIIL---FMYHSKWRE 221
              +I++   +    +PL + D       +    WV    VL  VY  I+    +   K+  
Sbjct:   199 QVIIEMKIIDNSWLPLTYFDIQSDGGFL---FWVFSSAVLALVYFFIMCLPLVCCQKYT- 254

Query:   222 RLPARPAFYKYISIMFILNALALF--ACVLNGASFGYWLYGVTNVCYHAFYLPLIYVTFL 279
             +LP++ +F  Y  +M +LN L     A +L  +S G    GV+   Y   Y P+IY TFL
Sbjct:   255 KLPSKGSFLIYCMMMVVLNVLQSMGAALILFKSSDGLCFVGVSTYVYFVLYPPIIYFTFL 314

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5ZII3 TPRA1 "Transmembrane protein adipocyte-associated 1 homolog" [Gallus gallus (taxid:9031)]

 Score = 151 (58.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 52/241 (21%), Positives = 104/241 (43%)

Query:    52 NVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAW-EC 110
             +++L+V +V F ++L ++   + +K+    S I   +Y  +++V+L+ +A   +      
Sbjct:    57 DLLLLVPNVLFFMFLLWKLPSARAKIRVTSSPIFTTFYILVFVVALVGIARAVVSMTVSA 116

Query:   111 TRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALARTFGISGLV-VGLDIIL 169
             +    VA  IL   T+  +L +E+S++       +     ++ R   I+ ++ +   +  
Sbjct:   117 SDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSVKRVLAITAVLSLAYSVTQ 176

Query:   170 KAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYHSKWRER--LPARP 227
               + +      L  +      H     W+        VY  ++ +  +  ++R  LP+R 
Sbjct:   177 GTLEILYPDAHLSAEDFNIYGHGGRHFWLASSCFFFLVYSFVVILPKTPLKDRISLPSRK 236

Query:   228 AFYKYISIMFILNALALFACVLNGASF--GYWLYGVTNVCYHAFYLPLIYVTFLADFFQE 285
             +FY Y  I+ +LN +      L       G      T   Y +F+ PLIYV FL  FF  
Sbjct:   237 SFYVYAGILAVLNLVQGLGSALLCVDIIEGLCCVDATTFLYFSFFAPLIYVAFLKGFFGS 296

Query:   286 E 286
             E
Sbjct:   297 E 297


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.143   0.467    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      309       309   0.00079  116 3  11 22  0.42    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  243 KB (2129 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.73u 0.18s 24.91t   Elapsed:  00:00:01
  Total cpu time:  24.73u 0.18s 24.91t   Elapsed:  00:00:01
  Start:  Fri May 10 08:09:09 2013   End:  Fri May 10 08:09:10 2013

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT3G05010	transmembrane protein, putative; transmembrane protein, putative; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function, transmembrane-40 (InterPro-IPR018781); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G27210.1); Has 103 Blast hits to 103 proteins in 34 species- Archae - 0; Bacteria - 4; Metazoa - 71; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink). (300 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	GP_ALPHA_1	GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transdu [...] (383 aa)					•		•		0.862
	AT3G59090	unknown protein; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; BEST Ar [...] (373 aa)							•		0.746
	AT5G42090	unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 24 plant [...] (439 aa)							•		0.746
	AT5G18520	unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 24 plant [...] (440 aa)							•		0.746
	AT3G09570	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (439 aa)							•		0.746
	AT2G36630	unknown protein; unknown protein; INVOLVED IN- N-terminal protein myristoylation; LOCATED IN- e [...] (459 aa)							•		0.742
	AT1G52780	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (1059 aa)							•		0.742
	AT5G02630	unknown protein; LOCATED IN- endomembrane system, integral to membrane; EXPRESSED IN- 21 plant [...] (428 aa)							•		0.718
	MLO13	MLO13 (MILDEW RESISTANCE LOCUS O 13); calmodulin binding; A member of a large family of seven-t [...] (478 aa)							•		0.679
	MLO9	MLO9 (MILDEW RESISTANCE LOCUS O 9); calmodulin binding; A member of a large family of seven-tra [...] (460 aa)							•		0.625

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
pfam10160	261	pfam10160, Tmemb_40, Predicted membrane protein	2e-98

>gnl|CDD|220606 pfam10160, Tmemb_40, Predicted membrane protein

 Score =  290 bits (743), Expect = 2e-98
 Identities = 131/265 (49%), Positives = 171/265 (64%), Gaps = 12/265 (4%)

Query: 40  YKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLS 99
           Y+W+        + VL+  ++ F+++L+++   +F+KL  GRS I+IA+YG LWLV+L++
Sbjct: 1   YRWVGGSRVRYWDTVLLAPNLLFLVFLAWKLGSAFAKLRTGRSPIVIAFYGLLWLVALVN 60

Query: 100 LAWCCLQAWECTRGK-----EVAWNILSLFTKSGMLFLEVSLLAFLFQGNYASGPEALAR 154
           +A C L   E T  K     +V WNIL  F    +LFLE+S++ F  Q  + S   ++ R
Sbjct: 61  IARCALSMTESTPDKAATVDQVLWNILRFF----LLFLELSVIIFGLQFGHLSSKSSITR 116

Query: 155 TFGISGLVVGLDIILKAVYLFGFG-IPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILF 213
              I+GLV  LD +L+ +  FGFG + LFID+     H  WG WV H LVLT VYG IL 
Sbjct: 117 VLLITGLVSALDTLLQVILEFGFGGVSLFIDNFDIGGHGGWGFWVAHSLVLTLVYGFILI 176

Query: 214 MYHSKWRERLPARPAFYKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAFYL 271
           +YHS+WRERLPA+P+FY Y  IM +LN L L    L  NGA FG  LYGVT  CY A YL
Sbjct: 177 LYHSRWRERLPAKPSFYNYCGIMALLNVLQLVGSALIANGAGFGLCLYGVTTFCYFALYL 236

Query: 272 PLIYVTFLADFFQEEDLRLENVYYS 296
           PL+YVTFLADFFQEEDL L NVYYS
Sbjct: 237 PLLYVTFLADFFQEEDLHLPNVYYS 261

This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown. Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
PF10160	261	Tmemb_40: Predicted membrane protein; InterPro: IP	100.0
KOG4536	347	consensus Predicted membrane protein [Function unk	100.0
KOG4536	347	consensus Predicted membrane protein [Function unk	85.69

>PF10160 Tmemb_40: Predicted membrane protein; InterPro: IPR018781 This entry represents 280 amino acid region found in a group of proteins conserved from plants to humans

Probab=100.00  E-value=1.1e-104  Score=736.05  Aligned_cols=256  Identities=46%  Similarity=0.843  Sum_probs=251.2

Q ss_pred             chhhhcccchhhhHHHHHHHHHHHHHHHhhchhhhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhhhhcccchh-hHHH
Q 021706           40 YKWLVECHGFLHNVVLIVSSVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCCLQAWECTRGK-EVAW  118 (309)
Q Consensus        40 ~~w~~~c~~~~~dv~llvPn~lFllFL~~~~~~s~~KL~~t~SpI~~tyY~llw~v~llnl~rc~lsm~~~~~~~-~~~w  118 (309)
                      ++|+.+|||++||+++++||++|++||++|+||+++|||+||||||+|||+++|+++++|++||++|||||+|++ +++|
T Consensus         1 y~~~~~~~v~~~d~~l~vPn~lFllfL~~~~~~s~~KL~~~~SpI~~tyY~llw~v~llnl~rc~vsm~~~~~~~~~~~d   80 (261)
T PF10160_consen    1 YRWIGGSRVRIWDVVLLVPNLLFLLFLAWRLRKSRRKLRHTRSPIFITYYALLWVVALLNLARCFVSMWVCSPGKGGIAD   80 (261)
T ss_pred             CcccccCceEehHHHHHHHHHHHHHHHHHhchHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHH
Confidence            579999999999999999999999999999999999999999999999999999999999999999999998875 7899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHHHhHHHHHHHHHhhccc-cceeecCCCCCCCccchh
Q 021706          119 NILSLFTKSGMLFLEVSLLAFLFQ-GNYASGPEALARTFGISGLVVGLDIILKAVYLFGFG-IPLFIDSNGQSPHVKWGL  196 (309)
Q Consensus       119 niLwl~trf~lL~lEvSvvvFgL~-Ghl~Sg~~si~rtl~iT~lis~~d~~lkaiy~f~~G-vplf~~~~~~~~hgg~~f  196 (309)
                      |++|+++||+||++|+||++||+| ||+|| |||||||+++|++||++|+++|++|||++| +|+++++++.++||||+|
T Consensus        81 ~~lW~ilrfflL~lEvSvvvFgL~fghlds-~~Si~r~l~iT~~is~~~s~~Q~ilef~~~d~~l~~~~~~~~~hgg~~f  159 (261)
T PF10160_consen   81 KVLWNILRFFLLSLEVSVVVFGLQFGHLDS-RSSIKRTLLITGLISLADSLTQAILEFGFGDVPLFIENFDLFGHGGWGF  159 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHHHHHHHheeecCcccccCCCCCcCCcCCeeh
Confidence            999999999999999999999998 88887 999999999999999999999999999999 899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhccCCCChhHHHHHHHHHHHHHHHHHHHHH--hcCCceeEEecchhhHHHHhhhHHH
Q 021706          197 WVVHRLVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLI  274 (309)
Q Consensus       197 W~~ss~~f~lVY~~I~~Lp~t~~r~rLPar~SFY~Yv~iL~lLN~iq~~Gs~L--~~~~~GlClvdvTt~~Yfaly~PLl  274 (309)
                      |++||++|++||++|++||++|||+|||||||||+||++|++||++|++||+|  +|+++|+|+||+|+++|||+|+|++
T Consensus       160 W~~~s~~f~~vY~~I~~L~~~r~r~~LPar~SFY~Y~~~L~~LN~~q~~Gs~Ll~~~~~~Glc~~d~t~~~Yfa~y~Pll  239 (261)
T PF10160_consen  160 WFISSLVFALVYGFILILTPLRWRDRLPARPSFYRYVGILFLLNLLQSIGSGLLGYGASFGLCLVDLTTFLYFALYPPLL  239 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEeccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999  7999999999999999999999999


Q ss_pred             HHHHHHhhhcccccccccchhh
Q 021706          275 YVTFLADFFQEEDLRLENVYYS  296 (309)
Q Consensus       275 Y~TFLadFF~ee~~~l~~~yYS  296 (309)
                      |+|||||||||||.|+||.|||
T Consensus       240 Y~TFL~~fF~~~d~~L~~~Yys  261 (261)
T PF10160_consen  240 YVTFLADFFQEEDVHLENVYYS  261 (261)
T ss_pred             HHHHHHHHhCccccCCCCCCCC
Confidence            9999999999999999999997

These are predicted to be membrane proteins, but apart from that their function is unknown.

>KOG4536 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=3.8e-92  Score=660.06  Aligned_cols=294  Identities=53%  Similarity=0.881  Sum_probs=269.2

Q ss_pred             ChhhhhhhcCCcccccccCCCCCCCCccccCCcccccccchhhhcccc-h---hhhHHHHHHHHHHHHHHHhhchhhhhh
Q 021706            1 MRVLDQIAQSPFPLIALSQNPNYSSSSIVKGGSFFGSGLYKWLVECHG-F---LHNVVLIVSSVCFVLYLSFQAKKSFSK   76 (309)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~c~~-~---~~dv~llvPn~lFllFL~~~~~~s~~K   76 (309)
                      ||+..+++++|...++.  +||+|.         +| +...|+.+||| +   +||+++++||++|++||++|++++++|
T Consensus         4 ~e~~~~i~~Sp~li~~L--~Pn~s~---------~~-~~~~~vyk~~G~frvrywd~vllipnilFl~fL~~k~~s~~~K   71 (347)
T KOG4536|consen    4 MEVLTEIAESPFLISPL--APNSSA---------PG-RCLLWVYKCHGTFRVRYWDTVLLIPNILFLAFLAYKAKSSLSK   71 (347)
T ss_pred             HHHHHHhccCCCcCCCC--CCCCcC---------CC-cceEEEEecCCcceehhhhHHHHHHHHHHHHHHHHhchhHHHH
Confidence            68899999999998887  888644         33 26779999999 6   999999999999999999999999999


Q ss_pred             hccCCchHHHHHHHHHHHHHHHHHHHHHhhh-hcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----hcccCChhHH
Q 021706           77 LSNGRSHIMIAYYGCLWLVSLLSLAWCCLQA-WECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLF----QGNYASGPEA  151 (309)
Q Consensus        77 L~~t~SpI~~tyY~llw~v~llnl~rc~lsm-~~~~~~~~~~wniLwl~trf~lL~lEvSvvvFgL----~Ghl~Sg~~s  151 (309)
                      ||++|||||+|||+++|+|+++|++||++|| |+|+|++|++||++|.++|||.++.|+++.++|+    |||..|++++
T Consensus        72 lr~~~SpI~iafy~lv~vvsLvniarc~~smt~s~t~g~e~~dkvlW~i~~fF~ls~el~~~v~glaFg~~~n~~Si~~a  151 (347)
T KOG4536|consen   72 LRNRRSPIMIAFYGLVWVVSLVNIARCCLSMTWSCTPGKEVADKVLWNILTFFTLSGELFLEVSGLAFGFQGNYASIAEA  151 (347)
T ss_pred             hhcCCChhHHHHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            9999999999999999999999999999999 5689999999999999999998888877777666    4677777788


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhhccccceeecCCCCCCCccchhHHHHHHHHHHHHHHHHHhcc--cchhccCCCChhH
Q 021706          152 LARTFGISGLVVGLDIILKAVYLFGFGIPLFIDSNGQSPHVKWGLWVVHRLVLTAVYGIILFMYH--SKWRERLPARPAF  229 (309)
Q Consensus       152 i~rtl~iT~lis~~d~~lkaiy~f~~Gvplf~~~~~~~~hgg~~fW~~ss~~f~lVY~~I~~Lp~--t~~r~rLPar~SF  229 (309)
                      ++||+++|+..+..|.++|++|.+++|+|++.|.+   .|||..||+.+|..+++||..++++|.  +|||+|||+||||
T Consensus       152 L~~T~liS~~~~a~q~~le~~y~d~~~~pl~fdi~---~~gg~~fWl~ss~~l~Lvy~~~milp~~~~k~r~kLPsr~sF  228 (347)
T KOG4536|consen  152 LTRTFLISGAYSALQLLLEAIYLDGFGVPLFFDIN---EHGGRFFWLWSSHKLLLVYSYGMILPMYNSKWREKLPSRPSF  228 (347)
T ss_pred             HHHHHHHhhHHHHHHHHHHheeeccccCceeeeec---ccCcEEEehHHHHHHHHHHHHHheeeccchhhhhcCCCcchH
Confidence            88888888888888889999999999999977654   389999999999999999999999887  5666669999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hcCCceeEEecchhhHHHHhhhHHHHHHHHHhhhcccccccccch-hhhhhh-cc---
Q 021706          230 YKYISIMFILNALALFACVL--NGASFGYWLYGVTNVCYHAFYLPLIYVTFLADFFQEEDLRLENVY-YSEMKD-AG---  302 (309)
Q Consensus       230 Y~Yv~iL~lLN~iq~~Gs~L--~~~~~GlClvdvTt~~Yfaly~PLlY~TFLadFF~ee~~~l~~~y-YSemkD-ag---  302 (309)
                      |+|+++|++||.+|++||+|  +|+.+|+|+||+||+|||++|+|+||+||||||||||+.++||+| |+|||| ||   
T Consensus       229 y~Y~~im~~Ln~Lq~~gsal~~f~~~~Glc~vgitt~~Yf~fy~PliYvtFLr~ff~~ep~nl~~~~~yre~kd~aGa~~  308 (347)
T KOG4536|consen  229 YVYIGIMAALNLLQLLGSALTAFDAHFGLCLVGITTVCYFAFYLPLIYVTFLRDFFQEEPLNLENVYCYREMKDAAGAAG  308 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccceEEechhHHHHHHHHHHHHHHHHHHHHhcCCCccchhhhhHHhhhhhccCCC
Confidence            99999999999999999999  699999999999999999999999999999999999999999999 999999 77   


Q ss_pred             CCCCCCC
Q 021706          303 FFDADWE  309 (309)
Q Consensus       303 ~fd~dw~  309 (309)
                      +||+|||
T Consensus       309 ~~da~y~  315 (347)
T KOG4536|consen  309 FFDADYE  315 (347)
T ss_pred             CccccCc
Confidence            9999997

>KOG4536 consensus Predicted membrane protein [Function unknown]

Probab=85.69  E-value=3.5  Score=40.79  Aligned_cols=80  Identities=26%  Similarity=0.297  Sum_probs=48.1

Q ss_pred             HHHHHHHHHhhchhhhhhhccCCchHHHHHHHHHHHHHHHHHHHHH-hhhhcc-cchhhHHHHHHHHHHHHHHHHHHHHH
Q 021706           59 SVCFVLYLSFQAKKSFSKLSNGRSHIMIAYYGCLWLVSLLSLAWCC-LQAWEC-TRGKEVAWNILSLFTKSGMLFLEVSL  136 (309)
Q Consensus        59 n~lFllFL~~~~~~s~~KL~~t~SpI~~tyY~llw~v~llnl~rc~-lsm~~~-~~~~~~~wniLwl~trf~lL~lEvSv  136 (309)
                      -++|+++=+-+.++-+|-=|.-==--+--.--++-++.+.--+=.. +||+-+ ....++.||++-+|+..+++++|+|.
T Consensus        57 Fl~fL~~k~~s~~~Klr~~~SpI~iafy~lv~vvsLvniarc~~smt~s~t~g~e~~dkvlW~i~~fF~ls~el~~~v~g  136 (347)
T KOG4536|consen   57 FLAFLAYKAKSSLSKLRNRRSPIMIAFYGLVWVVSLVNIARCCLSMTWSCTPGKEVADKVLWNILTFFTLSGELFLEVSG  136 (347)
T ss_pred             HHHHHHHhchhHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567777655444433322222111122222233333333333333 788886 56899999999999999999999997


Q ss_pred             HH
Q 021706          137 LA  138 (309)
Q Consensus       137 vv  138 (309)
                      ++
T Consensus       137 la  138 (347)
T KOG4536|consen  137 LA  138 (347)
T ss_pred             HH
Confidence            64

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	309
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 44/303 (14%), Positives = 78/303 (25%), Gaps = 93/303 (30%)

Query: 2   RVLDQIAQSPFP-------LIALSQNPNYSSSSIVKGGSFFGSGL---YKWL-------- 43
             +D I  S             L          +V+   F    L   YK+L        
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQE----EMVQ--KFVEEVLRINYKFLMSPIKTEQ 102

Query: 44  ----------VECHGFLHNVVLIVS--SVC-FVLYLSFQAKKSFSKLSNGRSHIMIAYYG 90
                     +E    L+N   + +  +V     YL  +       L   R    +   G
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR-----QALLELRPAKNVLIDG 157

Query: 91  CL-----WLVSLLSLAWCCLQAWECTRGKEVAWNILSLFTKSGMLFLEVSLLAFLFQGNY 145
            L     W+   +    C     +C    ++ W  L        +   +  L +    N+
Sbjct: 158 VLGSGKTWVALDV----CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 146 ASGPEALART-FGISGLVVGLDIILK-AVY---LFGFGIPLFIDSNGQSPHVKWGLWVVH 200
            S  +  +     I  +   L  +LK   Y   L      L +       +V       +
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL------LVLL------NV-QNAKAWN 260

Query: 201 R-------LVLTAVYGIILFMYHSKWRERLPARPAFYKYISIMFIL------NALALFAC 247
                   L+ T    +  F+             A   +IS+             +L   
Sbjct: 261 AFNLSCKILLTTRFKQVTDFL-----------SAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 248 VLN 250
            L+
Sbjct: 310 YLD 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00