Citrus Sinensis ID: 021797

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
Protein Sequence
MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS
Secondary Structure (PSIPRED)
cccEEEEEEcHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccccEEEEEccccccHHHHHcccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEcccccEEEEEEEcccccEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEEEEccccccccccccccccccEEEEEEEcccccEEEEEEcccccEEEEEEEccccEEEccccccccccccccccccEEEEEEcccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccHHHHHHHHHHHHHHcccccccccccccccccHcccccccHHEEcccccccEEEEEEccccccHHHHHHHHccccEEEEEccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccEEEEEcccccEEEEEccccEEEEEEHHHcEEEEEEccccccEEEEEEEEccccccccccccccccccEEEEEEEEcccccEEEEEEEccccEEEEEEcccccEEEEccccccccccccccccEEEEEEccccccEEEEEEEcc
Coil and Loop (DISEMBL)
mpgvlarfdgSEIQKMLQRWFqdsnsnfwdqkpkqrdsedLENSYerlphqlwnvskygpcadaaitglmppplmevqssqRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWrseqspkksepkpqsfaraspltclkdhprkgerltlspsgslAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKdaatssayyapvksdyclclaihaprkGIIEVWqmrtgprlltiqcakgskilqptyrfgssmasspyvpleVFLLNGDSGQLSVLNRSLS
Flexible Loop (DISEMBL)
mpgvlarfdgSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAilskvvpatfstiSSLSKMIWRSEqspkksepkpqsfaraspltclkdhprkgerltlspsgsLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLlngdsgqlsvlnrsls
Low Complexity Region (SEG)
MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS
Disordered region (IsUnstruct)
****************LQRWF**************************LPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIW******************************************LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNG*************
Disordered Region (DISOPRED)
*PGVLARFDGSEIQKMLQRW**************************RLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLS***************************CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME**********************LCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSL*
Disordered Region (DISEMBL)
MPGVLARFDGSEIQKMLQRWFQDSNSNFWD*************SYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMI*******************ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS
Disordered Region (DISPRO)
MPGVLARFDGSEIQKMLQRWFQDSNS****************NSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRS*************FARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK***********VKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	307	2.2.26 [Sep-21-2011]
Q9H2M9	1393	Rab3 GTPase-activating pr	yes	no	0.817	0.180	0.285	1e-21
Q8BMG7	1366	Rab3 GTPase-activating pr	yes	no	0.736	0.165	0.285	3e-21
Q5U1Z0	1386	Rab3 GTPase-activating pr	yes	no	0.726	0.160	0.297	4e-21
Q9VKB9	1341	Rab3 GTPase-activating pr	yes	no	0.648	0.148	0.274	1e-16
Q22670	1307	Rab3 GTPase-activating pr	yes	no	0.276	0.065	0.291	2e-05

>sp|Q9H2M9|RBGPR_HUMAN Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens GN=RAB3GAP2 PE=1 SV=1

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)

Query: 48  LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
           L ++ W +       D A  G+M   P   M+  S+   F A            +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310

Query: 93  SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
                F   E  ++ L+     A+ SK+  A F+  S    + W+S   E++ +K +PK 
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368

Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
           +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425

Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
           RDA   +++ + +  +     A ++P       S     L I+APR+GI+EVW  + GPR
Sbjct: 426 RDAQIGWIQTVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485

Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
           +      K  ++L P Y+    +++ S  + P   ++ L++  SG +  +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536

Regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.
Homo sapiens (taxid: 9606)

>sp|Q8BMG7|RBGPR_MOUSE Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus GN=Rab3gap2 PE=1 SV=2

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 30/256 (11%)

Query: 48  LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
           L ++ W +       D A  G+M   P   M+  S+   F A            +T+G  
Sbjct: 249 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 308

Query: 93  SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
                F   E  ++ L+     A+ SK+  A FS  S    + W+S+      + +    
Sbjct: 309 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQKQKPKM 366

Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
             A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +R+WKGYRDA
Sbjct: 367 EPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDA 426

Query: 206 SCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
              +++++ +  +       ++P       S     L I+APR+GI+EVW  + GPR+  
Sbjct: 427 QVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGA 486

Query: 260 IQCAKGSKILQPTYRF 275
               K  ++L P Y+ 
Sbjct: 487 FNVGKHCRLLYPGYKI 502

Regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.

Mus musculus (taxid: 10090)

>sp|Q5U1Z0|RBGPR_RAT Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus GN=Rab3gap2 PE=1 SV=2

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 36/259 (13%)

Query: 48  LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
           L ++ W +       D A  G+M   P   M+  S+   F A            +T+G  
Sbjct: 249 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 308

Query: 93  SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
                F   E  ++ L+     A+ SK+  A FS  S    + W+S   E++ +K +PK 
Sbjct: 309 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQKQKPKM 366

Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
           +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +R+WKGY
Sbjct: 367 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 423

Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
           RDA   +++++ +  +       ++P       S     L I+APR+GI+EVW  + GPR
Sbjct: 424 RDAQIGWIQIVEDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 483

Query: 257 LLTIQCAKGSKILQPTYRF 275
           +      K  ++L P Y+ 
Sbjct: 484 VGAFNVGKHCRLLYPGYKI 502

Regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.

Rattus norvegicus (taxid: 10116)

>sp|Q9VKB9|RBGPR_DROME Rab3 GTPase-activating protein regulatory subunit OS=Drosophila melanogaster GN=rab3-GAP PE=1 SV=2

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 27/226 (11%)

Query: 63  DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
           DAAI+    PP  +    Q     YF  V             G +  +  F+  E     
Sbjct: 213 DAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 272

Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
            +G +   V+   +  +  L  +  R+ +   SP++S  P P   A       L D  R 
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 330

Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
           G  L+++P G LA +TD+L R++L+DT   +++R+WKGYRDA C F+ +   K+ +    
Sbjct: 331 GLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387

Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
                K+   L L I+APR G +++W ++ GP++     +K  +++
Sbjct: 388 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLM 430

Probable regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3-GDP.

Drosophila melanogaster (taxid: 7227)

>sp|Q22670|RBGPR_CAEEL Rab3 GTPase-activating protein regulatory subunit OS=Caenorhabditis elegans GN=rbg-2 PE=3 SV=1

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 18/103 (17%)

Query: 162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 221
           R  + ++ SP     A+TD + R+L++D  +  VV ++KGYRDAS  ++ +  +   A  
Sbjct: 374 RVAQNVSRSPDCQYVAVTDRMARVLVIDIASRQVVLIFKGYRDASISWVSVTEDDRVAQ- 432

Query: 222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
                         L I APR+ ++EVW +    R+    CA+
Sbjct: 433 -------------FLTIFAPRRSLLEVWTVLGNVRV----CAQ 458

Probable regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3-GDP.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
225461677	457	PREDICTED: rab3 GTPase-activating protei	0.996	0.669	0.867	1e-156
224116998	354	predicted protein [Populus trichocarpa]	0.996	0.864	0.809	1e-146
255567076	484	rab3 gtpase-activating protein non-catal	0.967	0.613	0.810	1e-141
15231948	455	uncharacterized protein [Arabidopsis tha	1.0	0.674	0.783	1e-141
356543215	459	PREDICTED: rab3 GTPase-activating protei	0.993	0.664	0.802	1e-141
297830038	455	hypothetical protein ARALYDRAFT_478912 [	1.0	0.674	0.779	1e-141
449456579	456	PREDICTED: rab3 GTPase-activating protei	0.993	0.668	0.774	1e-140
449516756	456	PREDICTED: rab3 GTPase-activating protei	0.993	0.668	0.774	1e-140
356514563	460	PREDICTED: rab3 GTPase-activating protei	0.993	0.663	0.786	1e-138
115478506	469	Os09g0315800 [Oryza sativa Japonica Grou	0.993	0.650	0.726	1e-128

>gi|225461677|ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed protein product [Vitis vinifera]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/309 (86%), Positives = 294/309 (95%), Gaps = 3/309 (0%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           MPGV+ARFDG+++Q MLQRWFQD++S FWD+KPK+RD ED E SY RLP+QLWNVSKYGP
Sbjct: 150 MPGVIARFDGADLQSMLQRWFQDTHSQFWDEKPKRRDQEDSEKSYGRLPYQLWNVSKYGP 209

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAITG MPPPLME+QSSQRY+CAVTIG+D+VISAFRLSEDR+RSLVGAILSKVVPAT
Sbjct: 210 CADAAITGTMPPPLMELQSSQRYYCAVTIGDDAVISAFRLSEDRNRSLVGAILSKVVPAT 269

Query: 121 FSTISSLSKMIWRSEQ-SPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTI+S SKMIWRSEQ SPK+SEPKPQ FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 270 FSTIASFSKMIWRSEQKSPKRSEPKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 329

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLAI 238
           DSLGRILLLDTQALVVVRLWKGYRDASC+F EMLV+KD AA+SS+YY PVKSDYCLCLAI
Sbjct: 330 DSLGRILLLDTQALVVVRLWKGYRDASCLFTEMLVSKDTAASSSSYYEPVKSDYCLCLAI 389

Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
           HAPRKGI+EVWQMRTGPRLLT+QC+KGSKILQPTYRFGSSM  SPYVPLEVFLLNGDSGQ
Sbjct: 390 HAPRKGIVEVWQMRTGPRLLTVQCSKGSKILQPTYRFGSSMG-SPYVPLEVFLLNGDSGQ 448

Query: 299 LSVLNRSLS 307
           LSVLNRSL+
Sbjct: 449 LSVLNRSLN 457

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116998|ref|XP_002331804.1| predicted protein [Populus trichocarpa] gi|222874500|gb|EEF11631.1| predicted protein [Populus trichocarpa]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/309 (80%), Positives = 289/309 (93%), Gaps = 3/309 (0%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           +PGV+ARFDG++I+ +LQ WFQ++NS+FWD+K K+RD E+L N ++RLPHQLW+V K+G 
Sbjct: 47  IPGVIARFDGADIRNILQEWFQETNSHFWDEKSKRRDYEELGNGFKRLPHQLWSVDKFGL 106

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAITG+MPPPLME+QSSQRY+ AVTIGED+VISA+RLSEDRSRSLVGAILSKV+PA 
Sbjct: 107 CADAAITGIMPPPLMEIQSSQRYYRAVTIGEDAVISAYRLSEDRSRSLVGAILSKVMPAA 166

Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTISS+SKMIWRSE++P KK E KPQSFA+ASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 167 FSTISSVSKMIWRSERTPTKKPEVKPQSFAKASPLTCLKDHPRKGEKLTLSPSGTLAAIT 226

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA-TSSAYYAPVKSDYCLCLAI 238
           DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLV+ ++A  SS+++ P KSDYCLCLAI
Sbjct: 227 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVSMNSAGASSSHHEPSKSDYCLCLAI 286

Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
           HAPRKGIIEVWQMRTGPRLLTIQCAKGSK+LQPTYRFGSS+  SPYVPLEVFLLNGDSGQ
Sbjct: 287 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPTYRFGSSL-DSPYVPLEVFLLNGDSGQ 345

Query: 299 LSVLNRSLS 307
           LSVLNRSL+
Sbjct: 346 LSVLNRSLN 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567076|ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative [Ricinus communis] gi|223536194|gb|EEF37847.1| rab3 gtpase-activating protein non-catalytic subunit, putative [Ricinus communis]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/301 (81%), Positives = 276/301 (91%), Gaps = 4/301 (1%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           MPGV+ARFDGS++Q MLQ W Q+ +S FWD+KP  RD++ L  +Y+RLP+QLWNV+KYG 
Sbjct: 147 MPGVIARFDGSDLQNMLQEWIQEKHSQFWDEKP-NRDADGLGITYKRLPYQLWNVNKYGS 205

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAITG+MPPPLMEVQSSQRY+CAVTIG+D+VISA+RLSEDRS+SLVGAILSKVVPAT
Sbjct: 206 CADAAITGVMPPPLMEVQSSQRYYCAVTIGDDAVISAYRLSEDRSKSLVGAILSKVVPAT 265

Query: 121 FSTISSLSKMIWRSEQ-SPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTI+SLSKMIWRSE+ SPKKSE KPQSFA+ASPLTCLKDHPRKGE+LTLSP G+LAAIT
Sbjct: 266 FSTIASLSKMIWRSEKASPKKSEAKPQSFAKASPLTCLKDHPRKGEKLTLSPGGTLAAIT 325

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLAI 238
           DSLGRILLLDTQAL+VVRLWKGYRDASC FMEM V +D A  SS+YY P KSDYCLCLAI
Sbjct: 326 DSLGRILLLDTQALIVVRLWKGYRDASCFFMEMQVKRDNAGASSSYYEPSKSDYCLCLAI 385

Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
           HAPRKGIIEVWQMRTGPRLLTIQCA+G+K+LQPTYRFGSS   SPY+PLEVF+LNG+SGQ
Sbjct: 386 HAPRKGIIEVWQMRTGPRLLTIQCARGTKLLQPTYRFGSS-PDSPYIPLEVFVLNGESGQ 444

Query: 299 L 299
           L
Sbjct: 445 L 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231948|ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] gi|8777474|dbj|BAA97054.1| unnamed protein product [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1| At3g14910 [Arabidopsis thaliana] gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis thaliana] gi|332642066|gb|AEE75587.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/309 (78%), Positives = 275/309 (88%), Gaps = 2/309 (0%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           +PGV+ARFDGS IQ M+Q+W Q+ NSNFWDQK ++ D+ED  + Y+RLP+Q+WNV+K G 
Sbjct: 147 LPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKNRKGDAEDTGSLYQRLPYQIWNVNKNGV 206

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           C DA +TG+MPPPL+E+QSSQRY+CAVTIGEDSVISA+RLSEDR RSLVGAILSKVVPA 
Sbjct: 207 CVDATVTGVMPPPLLELQSSQRYYCAVTIGEDSVISAYRLSEDRGRSLVGAILSKVVPAA 266

Query: 121 FSTISSLSKMIWRS-EQSPK-KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
            STI+S SK+IWRS +QSPK K E K QSFARAS LTC+KD+PRKGE+LTLSPSG+LAAI
Sbjct: 267 ASTIASFSKLIWRSNDQSPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAI 326

Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 238
           TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML  KD   S  +  PVKSDYCLCLAI
Sbjct: 327 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLAKKDKGKSVIHTEPVKSDYCLCLAI 386

Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
           HAPRKGIIEVWQMRTGPRLLTIQCAKGSK+LQP YRFGS+ +SSPY+PLEVFLLNGDSGQ
Sbjct: 387 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQ 446

Query: 299 LSVLNRSLS 307
           +S+LNRSLS
Sbjct: 447 VSMLNRSLS 455

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543215|ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like [Glycine max]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/309 (80%), Positives = 282/309 (91%), Gaps = 4/309 (1%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           M GV+A FDGS+IQ MLQ+WF++S+S FWDQ PK  DSED  N+  ++P+QLWN+ KYG 
Sbjct: 150 MSGVIAHFDGSDIQNMLQKWFEESHSRFWDQNPKSHDSEDFGNTDVKIPYQLWNIGKYGT 209

Query: 61  CADAAITGLMPPPLMEVQ-SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPA 119
           CA+AAITG+MPPPLME Q SSQRY+CAV +GED+VISA+RLSE++ RSLVGAILSKVVPA
Sbjct: 210 CAEAAITGIMPPPLMEQQQSSQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 269

Query: 120 TFSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
           TFSTISS SK+IWRSEQS PKKS+ KPQ FARASPLTCLKDHPRKGE+LTLSPSG+LAAI
Sbjct: 270 TFSTISSFSKLIWRSEQSSPKKSDQKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAI 329

Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLA 237
           TDSLGRILLLDTQALVVVRLWKGYRDASC+FMEMLVNKD A++SS+Y  P+KSDYCLCLA
Sbjct: 330 TDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLA 389

Query: 238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSG 297
           IHAPRKGIIE+WQMRTGPRL TI CAKGSK+LQP+YRFG+SM SSPYVPLEVFLLNGDSG
Sbjct: 390 IHAPRKGIIEIWQMRTGPRLRTISCAKGSKMLQPSYRFGASM-SSPYVPLEVFLLNGDSG 448

Query: 298 QLSVLNRSL 306
           Q+SVLNR+L
Sbjct: 449 QISVLNRTL 457

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830038|ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 241/309 (77%), Positives = 274/309 (88%), Gaps = 2/309 (0%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           +PG++ARFDGS IQ MLQ+WFQ+ NSNFWDQK ++ D ED  + Y+RLP+Q+WNV+K G 
Sbjct: 147 LPGIIARFDGSNIQSMLQKWFQEKNSNFWDQKNRKGDVEDSGSLYQRLPYQIWNVNKNGV 206

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           C DA +TG+MPPPL+E+QSSQRY+CAVTIGED+VISA+RLSEDR RSLVGAILSKVVPA 
Sbjct: 207 CVDATVTGVMPPPLLELQSSQRYYCAVTIGEDAVISAYRLSEDRGRSLVGAILSKVVPAA 266

Query: 121 FSTISSLSKMIWRS-EQSPK-KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
            STI+S SK+IWRS +QSPK K E K QSFARAS LTC+KD+PRKGE+LTLSPSG+LAAI
Sbjct: 267 ASTIASFSKLIWRSNDQSPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAI 326

Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 238
           TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML  KD   S  +  PVKSDYCLCLAI
Sbjct: 327 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLAKKDKGKSVIHTEPVKSDYCLCLAI 386

Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
           HAPRKGIIEVWQMRTGPRLLTIQCA GSK+LQP YRFGS+ +SSPY+PLEVFLLNGDSGQ
Sbjct: 387 HAPRKGIIEVWQMRTGPRLLTIQCANGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQ 446

Query: 299 LSVLNRSLS 307
           +S+LNRSLS
Sbjct: 447 VSMLNRSLS 455

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456579|ref|XP_004146026.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like [Cucumis sativus]

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/310 (77%), Positives = 277/310 (89%), Gaps = 5/310 (1%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           MPGV+AR +GS+IQ  LQ+WFQ+S+S FWD K  QRD  D ENS E+L +Q+WNVSKYG 
Sbjct: 148 MPGVIARIEGSDIQNTLQKWFQESSSQFWDPKSHQRDMNDSENSVEKLAYQVWNVSKYGA 207

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAITG+MPPPLME+QSS+RYFCAVT+GED+VISAFRLSED+SRSLVGAILSKVVPAT
Sbjct: 208 CADAAITGVMPPPLMELQSSERYFCAVTVGEDAVISAFRLSEDKSRSLVGAILSKVVPAT 267

Query: 121 FSTISSLSKMIWRSE-QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTI+S SKMIWRSE ++ KK + K Q+FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 268 FSTIASFSKMIWRSEPKTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 327

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY---YAPVKSDYCLCL 236
           DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLVN+D A+SS+    Y P K+DYCLCL
Sbjct: 328 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNRDTASSSSNSMDYEPAKNDYCLCL 387

Query: 237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDS 296
           AIHAPRKGI+E+WQMRTG RL TI+C KGSK+LQP++R GSSM  SPYVPLEVFLLNGDS
Sbjct: 388 AIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLLQPSFRLGSSM-DSPYVPLEVFLLNGDS 446

Query: 297 GQLSVLNRSL 306
           GQ+ V+NR+L
Sbjct: 447 GQICVINRTL 456

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516756|ref|XP_004165412.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like [Cucumis sativus]

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/310 (77%), Positives = 277/310 (89%), Gaps = 5/310 (1%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           MPGV+AR +GS+IQ  LQ+WFQ+S+S FWD K  QRD  D ENS E+L +Q+WNVSKYG 
Sbjct: 148 MPGVIARIEGSDIQNTLQKWFQESSSQFWDPKSHQRDMNDSENSVEKLAYQVWNVSKYGA 207

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAITG+MPPPLME+QSS+RYFCAVT+GED+VISAFRLSED+SRSLVGAILSKVVPAT
Sbjct: 208 CADAAITGVMPPPLMELQSSERYFCAVTVGEDAVISAFRLSEDKSRSLVGAILSKVVPAT 267

Query: 121 FSTISSLSKMIWRSE-QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTI+S SKMIWRSE ++ KK + K Q+FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 268 FSTIASFSKMIWRSEPKTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 327

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY---YAPVKSDYCLCL 236
           DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLVN+D A+SS+    Y P K+DYCLCL
Sbjct: 328 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNRDTASSSSNSMDYEPAKNDYCLCL 387

Query: 237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDS 296
           AIHAPRKGI+E+WQMRTG RL TI+C KGSK+LQP++R GSSM  SPYVPLEVFLLNGDS
Sbjct: 388 AIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLLQPSFRLGSSM-DSPYVPLEVFLLNGDS 446

Query: 297 GQLSVLNRSL 306
           GQ+ V+NR+L
Sbjct: 447 GQICVINRTL 456

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514563|ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like [Glycine max]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/309 (78%), Positives = 282/309 (91%), Gaps = 4/309 (1%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
           M GV+ARFDGS+IQ MLQ+WF+++NS F DQ PK +DSED EN+  ++P+QLWN+ KYG 
Sbjct: 151 MSGVIARFDGSDIQNMLQKWFEEANSRFSDQNPKSQDSEDFENTDVKIPYQLWNIGKYGT 210

Query: 61  CADAAITGLMPPPLMEVQ-SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPA 119
           CADAAITG+MPPPLME Q S+QRY+CAV +GED+VISA+RLSE++ RSLVGAILSKVVPA
Sbjct: 211 CADAAITGIMPPPLMEQQQSNQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 270

Query: 120 TFSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
           TFSTISS SK+IWR+E+S PKKS+ KP+ FARASPLTCLKDHPRKGE+LTLSPSG+LAAI
Sbjct: 271 TFSTISSFSKLIWRNERSSPKKSDLKPRPFARASPLTCLKDHPRKGEKLTLSPSGTLAAI 330

Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLA 237
           TDSLGRILLLDTQALVVVRLWKGYRDASC+FMEMLVNKD A++SS+Y  P+KSDYCLCLA
Sbjct: 331 TDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLA 390

Query: 238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSG 297
           IHAPRKGIIE+WQMRTG RL TI C KGSK+LQP+YRFG+S+ SSPYVPLEVFLLNGDSG
Sbjct: 391 IHAPRKGIIEIWQMRTGQRLRTISCTKGSKMLQPSYRFGASV-SSPYVPLEVFLLNGDSG 449

Query: 298 QLSVLNRSL 306
           Q+SVLNR+L
Sbjct: 450 QISVLNRTL 458

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115478506|ref|NP_001062848.1| Os09g0315800 [Oryza sativa Japonica Group] gi|51091645|dbj|BAD36414.1| rab3-GAP regulatory domain-like [Oryza sativa Japonica Group] gi|113631081|dbj|BAF24762.1| Os09g0315800 [Oryza sativa Japonica Group] gi|218201904|gb|EEC84331.1| hypothetical protein OsI_30840 [Oryza sativa Indica Group] gi|222641308|gb|EEE69440.1| hypothetical protein OsJ_28835 [Oryza sativa Japonica Group]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/307 (72%), Positives = 263/307 (85%), Gaps = 2/307 (0%)

Query: 1   MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
            PGV+ARFDG+++Q MLQ+   +  S+ W  K +Q D+E+ ++S+ R+P Q+WNVSK+  
Sbjct: 163 FPGVIARFDGADLQNMLQKSLHEVKSHLWKDKSEQEDAEE-DSSFGRIPFQIWNVSKFSS 221

Query: 61  CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
           CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRS+VGAILS+ V AT
Sbjct: 222 CADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSIVGAILSRGVAAT 281

Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
           FSTISSLSK+IWRSE SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 282 FSTISSLSKIIWRSEPSPTKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAIT 341

Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 239
           DSLGRILLLDT ALV VRLWKGYRDASC+F+EML+NKD A+SS +    KSDYCLCLAIH
Sbjct: 342 DSLGRILLLDTHALVAVRLWKGYRDASCLFVEMLLNKDKASSSLHTEYTKSDYCLCLAIH 401

Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQL 299
           APRKGIIE+WQMRTG RLLTI C KGS+ILQP+ RF SS  SS Y PLEV+L NGDSGQL
Sbjct: 402 APRKGIIEIWQMRTGARLLTIPCPKGSRILQPSTRFMSSPFSSLYSPLEVYLFNGDSGQL 461

Query: 300 SVLNRSL 306
           SVLNR +
Sbjct: 462 SVLNRHI 468

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
TAIR|locus:2086390	455	AT3G14910 "AT3G14910" [Arabido	1.0	0.674	0.783	9.3e-130
UNIPROTKB|E1BVG8	1386	RAB3GAP2 "Uncharacterized prot	0.697	0.154	0.316	9.9e-23
UNIPROTKB|E2R4W9	1540	RAB3GAP2 "Uncharacterized prot	0.690	0.137	0.308	8.1e-22
UNIPROTKB|Q9H2M9	1393	RAB3GAP2 "Rab3 GTPase-activati	0.690	0.152	0.308	1.2e-21
UNIPROTKB|D4ABP4	1367	Rab3gap2 "Rab3 GTPase-activati	0.690	0.155	0.308	1.8e-21
ZFIN|ZDB-GENE-030616-610	1373	rab3gap2 "RAB3 GTPase activati	0.589	0.131	0.341	4.3e-21
RGD|1311518	1386	Rab3gap2 "RAB3 GTPase activati	0.690	0.152	0.303	5e-21
MGI|MGI:1916043	1366	Rab3gap2 "RAB3 GTPase activati	0.690	0.155	0.303	8e-21
UNIPROTKB|F1S9J9	1391	RAB3GAP2 "Uncharacterized prot	0.690	0.152	0.303	8.2e-21
UNIPROTKB|G5E601	1392	RAB3GAP2 "Uncharacterized prot	0.690	0.152	0.299	1.7e-20

TAIR|locus:2086390 AT3G14910 "AT3G14910" [Arabidopsis thaliana (taxid:3702)]

 Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
 Identities = 242/309 (78%), Positives = 275/309 (88%)

Query:     1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
             +PGV+ARFDGS IQ M+Q+W Q+ NSNFWDQK ++ D+ED  + Y+RLP+Q+WNV+K G 
Sbjct:   147 LPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKNRKGDAEDTGSLYQRLPYQIWNVNKNGV 206

Query:    61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
             C DA +TG+MPPPL+E+QSSQRY+CAVTIGEDSVISA+RLSEDR RSLVGAILSKVVPA 
Sbjct:   207 CVDATVTGVMPPPLLELQSSQRYYCAVTIGEDSVISAYRLSEDRGRSLVGAILSKVVPAA 266

Query:   121 FSTISSLSKMIWRS-EQSPK-KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
              STI+S SK+IWRS +QSPK K E K QSFARAS LTC+KD+PRKGE+LTLSPSG+LAAI
Sbjct:   267 ASTIASFSKLIWRSNDQSPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAI 326

Query:   179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 238
             TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML  KD   S  +  PVKSDYCLCLAI
Sbjct:   327 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLAKKDKGKSVIHTEPVKSDYCLCLAI 386

Query:   239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
             HAPRKGIIEVWQMRTGPRLLTIQCAKGSK+LQP YRFGS+ +SSPY+PLEVFLLNGDSGQ
Sbjct:   387 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQ 446

Query:   299 LSVLNRSLS 307
             +S+LNRSLS
Sbjct:   447 VSMLNRSLS 455

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BVG8 RAB3GAP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 277 (102.6 bits), Expect = 9.9e-23, P = 9.9e-23
 Identities = 75/237 (31%), Positives = 125/237 (52%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS--EQSP-K 139
             VT+G +     F   E  S+ L+     A+ SK+  A F   S    + W+S  E+ P +
Sbjct:   305 VTVGSNPFTGFFFALEGSSQPLLSHVALAVASKLTSALFHAASVSGWLGWKSKHEEEPVQ 364

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     + D  R GE++ LSP  +LAA+TD  GR++LLD    + +
Sbjct:   365 KQKPKVEP---ATPLAVRFGIPDSRRHGEKICLSPCNTLAAVTDDFGRVILLDVTRGLAI 421

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVKSDYCLC-----LAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++ + +  +  T    Y+P  +  C       L I+APR+GI+EVW 
Sbjct:   422 RMWKGYRDAEVGWIQTVEDLHERETEKIDYSPFGNAQCPSRVAQFLVIYAPRRGILEVWS 481

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  SG +  ++
Sbjct:   482 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQGWQPQTYQICLVDPVSGSVKTVH 538

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|E2R4W9 RAB3GAP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 269 (99.8 bits), Expect = 8.1e-22, P = 8.1e-22
 Identities = 73/237 (30%), Positives = 125/237 (52%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G +     F   E  ++ L+     A+ SK+  A F+  S    + W+S   E++ +
Sbjct:   451 ITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQ 508

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   509 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 565

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +  +     A ++P       S     L I+APR+GI+EVW 
Sbjct:   566 RMWKGYRDAQIGWIQIVEDLHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWS 625

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  SG +  +N
Sbjct:   626 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 682

GO:0043087 "regulation of GTPase activity" evidence=IEA

UNIPROTKB|Q9H2M9 RAB3GAP2 "Rab3 GTPase-activating protein non-catalytic subunit" [Homo sapiens (taxid:9606)]

 Score = 267 (99.0 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 73/237 (30%), Positives = 124/237 (52%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G +     F   E  ++ L+     A+ SK+  A F+  S    + W+S   E++ +
Sbjct:   305 ITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQ 362

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   363 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 419

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++ + +  +     A ++P       S     L I+APR+GI+EVW 
Sbjct:   420 RMWKGYRDAQIGWIQTVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWS 479

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  SG +  +N
Sbjct:   480 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0030234 "enzyme regulator activity" evidence=ISS

GO:0046982 "protein heterodimerization activity" evidence=ISS

GO:0043087 "regulation of GTPase activity" evidence=ISS

GO:0006886 "intracellular protein transport" evidence=TAS

GO:0008047 "enzyme activator activity" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0043085 "positive regulation of catalytic activity" evidence=TAS

GO:0043547 "positive regulation of GTPase activity" evidence=TAS

UNIPROTKB|D4ABP4 Rab3gap2 "Rab3 GTPase-activating protein non-catalytic subunit" [Rattus norvegicus (taxid:10116)]

 Score = 265 (98.3 bits), Expect = 1.8e-21, P = 1.8e-21
 Identities = 73/237 (30%), Positives = 123/237 (51%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G       F   E  ++ L+     A+ SK+  A FS  S    + W+S   E++ +
Sbjct:   304 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQ 361

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   362 KQKPKMEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 418

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +  +       ++P       S     L I+APR+GI+EVW 
Sbjct:   419 RMWKGYRDAQIGWIQIVEDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWS 478

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  S  + V+N
Sbjct:   479 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKVVN 535

GO:0043087 "regulation of GTPase activity" evidence=IEA

ZFIN|ZDB-GENE-030616-610 rab3gap2 "RAB3 GTPase activating protein subunit 2 (non-catalytic)" [Danio rerio (taxid:7955)]

 Score = 246 (91.7 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
 Identities = 68/199 (34%), Positives = 105/199 (52%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G       F   E  S+ L+     A+ SK+  A FS  S    + W+S   E+S +
Sbjct:   305 ITVGGGPYTGFFYAIEGSSQPLLSHVALAVASKLTSALFSAASGW--LGWKSKNEEESVQ 362

Query:   140 KSEPKPQSFARASPLTC-LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 198
             K +PK +  A A P+   L D  R GE + LSP  ++A +TD  GR+ LLD    + +R+
Sbjct:   363 KQKPKVEP-ATALPVRFGLPDSRRHGESICLSPCNTMAGVTDDFGRVTLLDVARGIAIRM 421

Query:   199 WKGYRDASCVFMEMLV---NKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
             WKGYRDA   ++++      +D ATS +   P +  +   L I+APR+GI+EVW  + GP
Sbjct:   422 WKGYRDAQLGWVQVSEARGERDIATSPSM--PRR--HAQFLVIYAPRRGILEVWGTQHGP 477

Query:   256 RLLTIQCAKGSKILQPTYR 274
             R+      K  ++L   +R
Sbjct:   478 RVGAFTVGKHCRLLYGGHR 496

GO:0005179 "hormone activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

RGD|1311518 Rab3gap2 "RAB3 GTPase activating protein subunit 2" [Rattus norvegicus (taxid:10116)]

 Score = 261 (96.9 bits), Expect = 5.0e-21, P = 5.0e-21
 Identities = 72/237 (30%), Positives = 122/237 (51%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G       F   E  ++ L+     A+ SK+  A FS  S    + W+S   E++ +
Sbjct:   303 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQ 360

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   361 KQKPKMEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 417

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +  +       ++P       S     L I+APR+GI+EVW 
Sbjct:   418 RMWKGYRDAQIGWIQIVEDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWS 477

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  S  +  +N
Sbjct:   478 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKAVN 534

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030234 "enzyme regulator activity" evidence=IDA

GO:0043087 "regulation of GTPase activity" evidence=IEA;IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

MGI|MGI:1916043 Rab3gap2 "RAB3 GTPase activating protein subunit 2" [Mus musculus (taxid:10090)]

 Score = 259 (96.2 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 72/237 (30%), Positives = 121/237 (51%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G       F   E  ++ L+     A+ SK+  A FS  S    + W+S   E + +
Sbjct:   303 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQ 360

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   361 KQKPKMEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 417

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +  +       ++P       S     L I+APR+GI+EVW 
Sbjct:   418 RMWKGYRDAQVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWN 477

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  S  +  +N
Sbjct:   478 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKAVN 534

GO:0003674 "molecular_function" evidence=ND

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0043087 "regulation of GTPase activity" evidence=IEA

UNIPROTKB|F1S9J9 RAB3GAP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 259 (96.2 bits), Expect = 8.2e-21, P = 8.2e-21
 Identities = 72/237 (30%), Positives = 125/237 (52%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G +     F   E  ++ L+     A+ SK+  A F+  S    + W+S   E++  
Sbjct:   304 ITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVP 361

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             + +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   362 RQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVTRGIAI 418

Query:   197 RLWKGYRDASCVFMEMLVN-----KDAATSSAYYAPV-KSDYCLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +      + A  S + +P   S     L I+APR+GI+EVW 
Sbjct:   419 RMWKGYRDAQTGWIQIVEDLHERVPERADFSPFGSPQGPSRVAQFLVIYAPRRGILEVWS 478

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  SG +  ++
Sbjct:   479 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVS 535

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

UNIPROTKB|G5E601 RAB3GAP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 71/237 (29%), Positives = 123/237 (51%)

Query:    87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
             +T+G       F   E  ++ L+     A+ SK+  A F+  S    + W+S   E++ +
Sbjct:   304 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAFQ 361

Query:   140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
             K +PK +    A+PL     L D  R GE + LSP  +LAA+TD  GR++LLD    + +
Sbjct:   362 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 418

Query:   197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVKSDY-----CLCLAIHAPRKGIIEVWQ 250
             R+WKGYRDA   +++++ +  +       ++P  S          L I+APR+GI+EVW 
Sbjct:   419 RMWKGYRDAQTGWIQIVEDLHERVPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILEVWS 478

Query:   251 MRTGPRLLTIQCAKGSKILQPTYRF-G-SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
              + GPR+      K  ++L P Y+  G +++ S  + P   ++ L++  SG +  ++
Sbjct:   479 TQQGPRVGAFNVGKYCRLLYPGYKIMGLNNITSQSWQPQTYQICLVDPVSGSVKTVS 535

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	307
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	100.0
KOG2727	1244	consensus Rab3 GTPase-activating protein, non-cata	100.0
KOG0266	456	consensus WD40 repeat-containing protein [General	97.07
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	97.05
KOG0266	456	consensus WD40 repeat-containing protein [General	96.98
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	96.92
PTZ00421	493	coronin; Provisional	96.79
KOG0649	325	consensus WD40 repeat protein [General function pr	96.75
KOG0299	479	consensus U3 snoRNP-associated protein (contains W	96.75
KOG0263	707	consensus Transcription initiation factor TFIID, s	96.36
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	96.32
PTZ00421	493	coronin; Provisional	96.25
PTZ00420	568	coronin; Provisional	95.94
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	95.91
KOG1446	311	consensus Histone H3 (Lys4) methyltransferase comp	95.85
KOG0271	480	consensus Notchless-like WD40 repeat-containing pr	95.77
KOG0263	707	consensus Transcription initiation factor TFIID, s	95.61
KOG0271	480	consensus Notchless-like WD40 repeat-containing pr	95.55
PTZ00420	568	coronin; Provisional	95.33
KOG0296	399	consensus Angio-associated migratory cell protein	95.08
KOG0279	315	consensus G protein beta subunit-like protein [Sig	94.92
KOG0639	705	consensus Transducin-like enhancer of split protei	94.82
KOG0272	459	consensus U4/U6 small nuclear ribonucleoprotein Pr	94.59
PLN00181	793	protein SPA1-RELATED; Provisional	94.56
KOG0265	338	consensus U5 snRNP-specific protein-like factor an	94.53
KOG0316	307	consensus Conserved WD40 repeat-containing protein	94.42
KOG0282	503	consensus mRNA splicing factor [Function unknown]	94.33
KOG2727	1244	consensus Rab3 GTPase-activating protein, non-cata	94.19
KOG0284	464	consensus Polyadenylation factor I complex, subuni	94.15
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	94.15
KOG0315	311	consensus G-protein beta subunit-like protein (con	94.05
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	93.69
KOG0286	343	consensus G-protein beta subunit [General function	93.6
KOG0319	775	consensus WD40-repeat-containing subunit of the 18	93.19
KOG0291	893	consensus WD40-repeat-containing subunit of the 18	93.12
KOG0279	315	consensus G protein beta subunit-like protein [Sig	93.1
KOG1273	405	consensus WD40 repeat protein [General function pr	92.84
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	92.52
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	92.24
KOG0291	893	consensus WD40-repeat-containing subunit of the 18	92.18
KOG0277	311	consensus Peroxisomal targeting signal type 2 rece	92.17
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	92.13
KOG1407	313	consensus WD40 repeat protein [Function unknown]	92.01
KOG0285	460	consensus Pleiotropic regulator 1 [RNA processing	91.72
PRK03629	429	tolB translocation protein TolB; Provisional	91.45
KOG1912	1062	consensus WD40 repeat protein [General function pr	91.43
KOG0319	775	consensus WD40-repeat-containing subunit of the 18	91.28
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	91.07
KOG0308	735	consensus Conserved WD40 repeat-containing protein	90.95
PLN00181	793	protein SPA1-RELATED; Provisional	90.89
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	90.83
KOG0310	487	consensus Conserved WD40 repeat-containing protein	90.71
KOG1188	376	consensus WD40 repeat protein [General function pr	90.5
KOG0318	603	consensus WD40 repeat stress protein/actin interac	89.88
KOG0273	524	consensus Beta-transducin family (WD-40 repeat) pr	89.74
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	89.46
KOG0295	406	consensus WD40 repeat-containing protein [Function	89.44
KOG0282	503	consensus mRNA splicing factor [Function unknown]	89.01
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	88.77
KOG0316	307	consensus Conserved WD40 repeat-containing protein	88.76
KOG0318	603	consensus WD40 repeat stress protein/actin interac	88.52
KOG0288	459	consensus WD40 repeat protein TipD [General functi	87.26
KOG0275	508	consensus Conserved WD40 repeat-containing protein	86.57
KOG0286	343	consensus G-protein beta subunit [General function	86.19
PRK11028	330	6-phosphogluconolactonase; Provisional	86.13
PRK11028	330	6-phosphogluconolactonase; Provisional	86.09
KOG1539	910	consensus WD repeat protein [General function pred	85.83
KOG0295	406	consensus WD40 repeat-containing protein [Function	85.36
PRK01742	429	tolB translocation protein TolB; Provisional	85.13
KOG1274	933	consensus WD40 repeat protein [General function pr	85.05
KOG0264	422	consensus Nucleosome remodeling factor, subunit CA	83.58
KOG0281	499	consensus Beta-TrCP (transducin repeats containing	83.3
KOG0280	339	consensus Uncharacterized conserved protein [Amino	83.3
PRK02889	427	tolB translocation protein TolB; Provisional	82.88
KOG0289	506	consensus mRNA splicing factor [General function p	82.85
PRK04792	448	tolB translocation protein TolB; Provisional	82.73
KOG0296	399	consensus Angio-associated migratory cell protein	82.69
PRK01742	429	tolB translocation protein TolB; Provisional	82.53
COG2319	466	FOG: WD40 repeat [General function prediction only	82.25
KOG0267	825	consensus Microtubule severing protein katanin p80	82.0
KOG1408	1080	consensus WD40 repeat protein [Function unknown]	81.77
KOG1446	311	consensus Histone H3 (Lys4) methyltransferase comp	81.6
KOG0306	888	consensus WD40-repeat-containing subunit of the 18	81.56
KOG3914	390	consensus WD repeat protein WDR4 [Function unknown	81.37
KOG0301	745	consensus Phospholipase A2-activating protein (con	80.31
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	80.19

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=100.00  E-value=2.9e-73  Score=559.48  Aligned_cols=257  Identities=36%  Similarity=0.550  Sum_probs=212.7

Q ss_pred             CCceEEEEechhHHHHHHHHHHhhccccCCCCCccCCcccccCCCCCccccccccCCCcceeeeEEeccCCCCchhhh--
Q 021797            1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQ--   78 (307)
Q Consensus         1 y~~~i~~i~G~~l~~~L~~c~~q~~~~~~~~~~~~~~~~~~~~~~~~L~ykKW~~~~~~~i~Daa~~G~~~pp~~~~~--   78 (307)
                      ||++||+|||+||+++|++|++|++++.|+.       .+ ...+++|+||||+|++++.|+|++++|+++|++|||.  
T Consensus       136 y~~~v~~Idg~sL~~~L~~~~~~~~~~~~~~-------~~-~~~~~~L~ykKw~l~~~~~i~D~~~~G~~~~~~fd~l~~  207 (415)
T PF14655_consen  136 YPSAVVIIDGFSLFSVLRACRNQVARGAASG-------SD-SPAPPPLSYKKWNLQSQDTINDAAICGPMPPSTFDHLVT  207 (415)
T ss_pred             ECCEEEEEecHHHHHHHHHHHHhhhhhhhcc-------cc-cCCCCccceeEecCCCCCcEeeEEEecCCCCcHHHHHHh
Confidence            8999999999999999999999999984222       22 3457889999999999999999999999999999973  


Q ss_pred             ------------ccccceeEEEecCCceeEEEeecCCCCcchhhHHHhhhhh-HHHHHHHhhhhhhccC--CCCCCC-CC
Q 021797           79 ------------SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVP-ATFSTISSLSKMIWRS--EQSPKK-SE  142 (307)
Q Consensus        79 ------------s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~a~~s~va~-Av~s~~~s~ak~~W~~--~~~~~~-~e  142 (307)
                                  +...++++|++|++||+|||+++|+.+++    ++++|+. +|+++++++.+.+|+.  +.++++ ++
T Consensus       208 aS~~gf~a~~~~s~~~~~~~i~~G~~P~v~f~~~~e~~s~~----~ls~va~~aVas~l~sav~~~lg~~~~~~~~~~~~  283 (415)
T PF14655_consen  208 ASIGGFNAKYRSSPPRMSRYITVGSSPFVSFYYASEGSSQP----LLSDVASSAVASKLTSAVSGWLGWGSWRSEQQPQE  283 (415)
T ss_pred             hhcccccceeecCCcceEEEEEecCCceEEEEEccCCCCcc----cHHHHHHHHHHHHHHhhhHhhcccCCCCCcccccc
Confidence                        34577899999999999999988877775    5667777 8888888876644433  332221 11


Q ss_pred             -----CCCCCcccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEeccc
Q 021797          143 -----PKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD  217 (307)
Q Consensus       143 -----~~p~~~~~a~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~  217 (307)
                           +++++.++....++|+|++|++++|++||+++|||+||+||||+|+|+++++|||||||||||||+|+++.++.+
T Consensus       284 ~~~~~~~~~~~~~l~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~  363 (415)
T PF14655_consen  284 KQPPEPKPEPAAPLPMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGD  363 (415)
T ss_pred             ccccccCcCCCcccceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccc
Confidence                 122332222233679999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEe
Q 021797          218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL  269 (307)
Q Consensus       218 ~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll  269 (307)
                      +..+..+....+.+.+|||||||||||+||||+||||+||+||+|+|+||||
T Consensus       364 ~~~~~~~~~~~~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v~k~~rLl  415 (415)
T PF14655_consen  364 RDRSNSNSPKSSSRFALFLVIYAPRRGILEVWSMRQGPRVAAFNVGKGCRLL  415 (415)
T ss_pred             cccccccccCCCCcceEEEEEEeccCCeEEEEecCCCCEEEEEEeCCCcEEC
Confidence            5333334444556679999999999999999999999999999999999997

>KOG2727 consensus Rab3 GTPase-activating protein, non-catalytic subunit [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.8e-69  Score=554.44  Aligned_cols=290  Identities=46%  Similarity=0.645  Sum_probs=237.0

Q ss_pred             CCceEEEEechhHHHHHHHHHHhhccccCCCCCccCCcccccCCCCCcccccccc-CCCcceeeeEEec-cCCCCchhh-
Q 021797            1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNV-SKYGPCADAAITG-LMPPPLMEV-   77 (307)
Q Consensus         1 y~~~i~~i~G~~l~~~L~~c~~q~~~~~~~~~~~~~~~~~~~~~~~~L~ykKW~~-~~~~~i~Daa~~G-~~~pp~~~~-   77 (307)
                      ||.++|+|+|++|++.|.||++++++++      +.+ + .....++++||||.+ ++.+.+-++++++ ...||++|+ 
T Consensus       150 yp~~~~~I~g~sl~~~L~ncq~~Vqkaa------~Ek-n-sn~~~~~~~~qk~~l~qdi~~~I~hai~~~~~~ppt~Dq~  221 (1244)
T KOG2727|consen  150 YPEICIVIPGVSLRFDLSNCQSMVQKAA------QEK-N-SNFWDQKNRKQKAELTQDIYQRIPHAIWNVNKNPPTVDQT  221 (1244)
T ss_pred             ecceEEEECCchhhhhHHHHHHHHHHHH------Hhc-c-CCcCCccchhhhhhcccchhhccchheeecccCCccHHHh
Confidence            8999999999999999999999999983      221 1 122456799999999 6666544444444 477888888 


Q ss_pred             --h------------ccccceeEEEecCCceeEEEeecCCCCcchhhHHHhhhhhHHHHHHHhhhhhhccCCC---CCCC
Q 021797           78 --Q------------SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKK  140 (307)
Q Consensus        78 --~------------s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~a~~s~va~Av~s~~~s~ak~~W~~~~---~~~~  140 (307)
                        +            |..+|++++|+|++||++||+++|+.+++++++++.+|++++.+-+.|... +|.+++   +..+
T Consensus       222 vtas~~~gy~a~~k~SpPrySq~vt~ge~pf~gFf~a~eg~~~~llg~Vak~v~s~A~sn~asg~f-gi~~ep~~sp~~k  300 (1244)
T KOG2727|consen  222 VTASMPPGYLALQKPSPPRYSQAVTIGEDPFIGFFRASEGRGRSLLGAVAKKVVSAAASNIASGSF-GIWREPDQSPKRK  300 (1244)
T ss_pred             hhcccCchhhhhccCCCcceeeeEEecCCceeeeeeeccccccccHHHHHHHhhhhhhhhhhhhee-eccCCCCcChhhc
Confidence              2            334778999999999999999999999987777776666665443333222 443443   3455


Q ss_pred             CCCCCCCcccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccc
Q 021797          141 SEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT  220 (307)
Q Consensus       141 ~e~~p~~~~~a~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~  220 (307)
                      ++|++++..+++...+|+|.+|+|+.|++||+|+|||+||++|||+|+|+++++|||||||||||||+|+++.+..++  
T Consensus       301 p~pk~~saapa~~R~~i~D~~R~ge~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vkek~~~--  378 (1244)
T KOG2727|consen  301 PEPKTQSAAPASSRTCIKDYPRKGEKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKEKKGK--  378 (1244)
T ss_pred             CCCCCCcccccceeeccccCccccceeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccceeEEEEcccccCC--
Confidence            667777766666667899999999999999999999999999999999999999999999999999999998876543  


Q ss_pred             cccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEeccCcccccccC--CCCCcc---cEEEEEeCC
Q 021797          221 SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMA--SSPYVP---LEVFLLNGD  295 (307)
Q Consensus       221 ~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~~~--~~~~~~---~~~~ll~~~  295 (307)
                          .++.+.+.||||||||||||+||||.||+||||+||||+|+|+|+||+|++||.+.  ++..+|   +.|+|+|| 
T Consensus       379 ----s~~~~sRvAlFLvIyAPRrgiLEVW~~q~gpRV~AfnV~Ks~~Llypny~~gG~nnsssqs~~plt~~~clf~Dp-  453 (1244)
T KOG2727|consen  379 ----SEPVKSRVALFLVIYAPRRGILEVWQMQTGPRVLAFNVAKSSKLLYPNYRFGGNNNSSSQSCHPLTVFLCLFGDP-  453 (1244)
T ss_pred             ----CccCcCceeEEEEEecccccHHHHHHhccCCeEEEEecCCccccccCcceecCCCCcCccccchhhhhhhhccCC-
Confidence                35677889999999999999999999999999999999999999999999999733  444555   68888999 


Q ss_pred             CCceEEEeccC
Q 021797          296 SGQLSVLNRSL  306 (307)
Q Consensus       296 ~g~l~~in~~~  306 (307)
                      +|++++||+.+
T Consensus       454 ~Gsvk~In~PF  464 (1244)
T KOG2727|consen  454 KGSVKMINRPF  464 (1244)
T ss_pred             CCceEEeccce
Confidence            89999999853

>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]

Probab=97.07  E-value=0.0076  Score=60.43  Aligned_cols=86  Identities=30%  Similarity=0.403  Sum_probs=68.1

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      .+..|..+.--..+++.+|.|++.+..+..|-|-++|+.++..+++++|+.+    .|....-.             .+.
T Consensus       238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~----~is~~~f~-------------~d~  300 (456)
T KOG0266|consen  238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD----GISGLAFS-------------PDG  300 (456)
T ss_pred             EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC----ceEEEEEC-------------CCC
Confidence            4455888888889999999999999999999999999999999999999999    44332211             122


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV  257 (307)
                      . +|+ -+-.+|.|.||++.+|.+.
T Consensus       301 ~-~l~-s~s~d~~i~vwd~~~~~~~  323 (456)
T KOG0266|consen  301 N-LLV-SASYDGTIRVWDLETGSKL  323 (456)
T ss_pred             C-EEE-EcCCCccEEEEECCCCcee
Confidence            2 233 3366999999999999965

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=97.05  E-value=0.0095  Score=50.28  Aligned_cols=86  Identities=23%  Similarity=0.331  Sum_probs=62.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+..++.+|+++++++++..|.|.++|+.++..++.++++.+    .+....-.             ++..  .
T Consensus       131 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~-------------~~~~--~  191 (289)
T cd00200         131 LRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTG----EVNSVAFS-------------PDGE--K  191 (289)
T ss_pred             eccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCcc----ccceEEEC-------------CCcC--E
Confidence            445566789999999999999998899999999999999999987654    22111100             0111  2


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++.+-.+|.|.+|+++.+..+..+.
T Consensus       192 l~~~~~~~~i~i~d~~~~~~~~~~~  216 (289)
T cd00200         192 LLSSSSDGTIKLWDLSTGKCLGTLR  216 (289)
T ss_pred             EEEecCCCcEEEEECCCCceecchh
Confidence            2344449999999999888777764

>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]

Probab=96.98  E-value=0.014  Score=58.44  Aligned_cols=93  Identities=18%  Similarity=0.287  Sum_probs=76.3

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEc-CCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDT-QALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~-~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      .+..+.+..+.+..++.+|++++++.+...+.|-++|+ ..+..+|..||+.+    ++-...=..           +  
T Consensus       195 ~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~----~v~~~~f~p-----------~--  257 (456)
T KOG0266|consen  195 LLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHST----YVTSVAFSP-----------D--  257 (456)
T ss_pred             hhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCC----ceEEEEecC-----------C--
Confidence            34557889999999999999999999999999999999 77899999999999    664332111           1  


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                       . -|++-+-.++.|.||++++|..+..+..-.
T Consensus       258 -g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs  288 (456)
T KOG0266|consen  258 -G-NLLVSGSDDGTVRIWDVRTGECVRKLKGHS  288 (456)
T ss_pred             -C-CEEEEecCCCcEEEEeccCCeEEEeeeccC
Confidence             1 278999999999999999988887777544

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=96.92  E-value=0.023  Score=47.89  Aligned_cols=84  Identities=23%  Similarity=0.311  Sum_probs=63.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      |..++..+.+++.+|++++++++...|.|.++|+.++..++..+++...  .+.|..   .                .. 
T Consensus         5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~---~----------------~~-   64 (289)
T cd00200           5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA---D----------------GT-   64 (289)
T ss_pred             hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECC---C----------------CC-
Confidence            5566778999999999999999888999999999999888888887653  222221   1                01 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       +++.+-.+|.|.||+++++..+..+.
T Consensus        65 -~l~~~~~~~~i~i~~~~~~~~~~~~~   90 (289)
T cd00200          65 -YLASGSSDKTIRLWDLETGECVRTLT   90 (289)
T ss_pred             -EEEEEcCCCeEEEEEcCcccceEEEe
Confidence             33455569999999999876666655

>PTZ00421 coronin; Provisional

Probab=96.79  E-value=0.021  Score=58.49  Aligned_cols=93  Identities=17%  Similarity=0.207  Sum_probs=71.0

Q ss_pred             CCccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          153 PLTCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      ++..|..+.+.+..|+.+|++ .++|++...|.|.|+|+.++..++.++|+.+.    |....-.             ++
T Consensus       117 ~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~----V~sla~s-------------pd  179 (493)
T PTZ00421        117 PIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQ----ITSLEWN-------------LD  179 (493)
T ss_pred             ceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCc----eEEEEEE-------------CC
Confidence            444577778889999999975 68888888999999999999999999998872    3221110             01


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      .  -+++.+..+|.|.||++++|..+..+....
T Consensus       180 G--~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~  210 (493)
T PTZ00421        180 G--SLLCTTSKDKKLNIIDPRDGTIVSSVEAHA  210 (493)
T ss_pred             C--CEEEEecCCCEEEEEECCCCcEEEEEecCC
Confidence            1  255778899999999999999888776443

>KOG0649 consensus WD40 repeat protein [General function prediction only]

Probab=96.75  E-value=0.0096  Score=56.83  Aligned_cols=90  Identities=21%  Similarity=0.376  Sum_probs=70.6

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      ++..+.++|...-+..+-..|-++-+|+.+|.+-|.+||+-|    .+......+.+               -=+.-..-
T Consensus       116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtD----YvH~vv~R~~~---------------~qilsG~E  176 (325)
T KOG0649|consen  116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTD----YVHSVVGRNAN---------------GQILSGAE  176 (325)
T ss_pred             ccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcc----eeeeeeecccC---------------cceeecCC
Confidence            578899999654444444788999999999999999999999    77655432211               12345677


Q ss_pred             CCeEEEeecCCCCeEEEEEecCCeEEecc
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAKGSKILQP  271 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~~~~Ll~~  271 (307)
                      +|.+.||++++++.|-++.+-|+-.+++|
T Consensus       177 DGtvRvWd~kt~k~v~~ie~yk~~~~lRp  205 (325)
T KOG0649|consen  177 DGTVRVWDTKTQKHVSMIEPYKNPNLLRP  205 (325)
T ss_pred             CccEEEEeccccceeEEeccccChhhcCc
Confidence            99999999999999999999888777775

>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]

Probab=96.75  E-value=0.0037  Score=63.25  Aligned_cols=50  Identities=24%  Similarity=0.306  Sum_probs=45.9

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceee
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV  208 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~  208 (307)
                      .+.+++.++++||+|+|+|..+-.-.|.++|..++.-+..|||+|++=.+
T Consensus       200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~  249 (479)
T KOG0299|consen  200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSS  249 (479)
T ss_pred             cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceee
Confidence            67889999999999999999998888999999999999999999996443

>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]

Probab=96.36  E-value=0.012  Score=62.43  Aligned_cols=82  Identities=17%  Similarity=0.231  Sum_probs=64.4

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ..+.|.-+++.+++++.||+|++.|..|..|+|+|||+.+|..|...||+.+.=+ =+...-+                .
T Consensus       569 ~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~-SlsFS~d----------------g  631 (707)
T KOG0263|consen  569 SVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIY-SLSFSRD----------------G  631 (707)
T ss_pred             EEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCcee-EEEEecC----------------C
Confidence            3345788999999999999999999999999999999999999999999966322 2222111                1


Q ss_pred             ceEEEEEcCCCCeEEEeecCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~  253 (307)
                        -..+-+.-+..|.+||+..
T Consensus       632 --~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  632 --NVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             --CEEEecCCCCeEEEEEchh
Confidence              1345677799999999864

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=96.32  E-value=0.052  Score=48.08  Aligned_cols=83  Identities=16%  Similarity=0.165  Sum_probs=56.5

Q ss_pred             eeEEEECCCCCEEEEE-cCCCcEEEEEcCCceeEEeec-ccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          164 GERLTLSPSGSLAAIT-DSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       164 ~~~I~lsP~~~lAavt-DslGRV~LiD~~~~~ivRmWK-GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ...|+.+|+++++.++ ...++|.++|+.++.+++... |..--.+.|    .+ +          .   .  +|++=+.
T Consensus       209 ~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~----~~-~----------g---~--~l~~~~~  268 (300)
T TIGR03866       209 PVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAF----TP-D----------E---K--YLLTTNG  268 (300)
T ss_pred             ccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEE----CC-C----------C---C--EEEEEcC
Confidence            3468899999875553 445799999999999987653 221111111    11 0          1   1  3444456


Q ss_pred             CCCeEEEeecCCCCeEEEEEecCCe
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCAKGS  266 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~~~~  266 (307)
                      ..|.|.||+++++..+..+.++++.
T Consensus       269 ~~~~i~v~d~~~~~~~~~~~~~~~~  293 (300)
T TIGR03866       269 VSNDVSVIDVAALKVIKSIKVGRLP  293 (300)
T ss_pred             CCCeEEEEECCCCcEEEEEEccccc
Confidence            7899999999999999999988653

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PTZ00421 coronin; Provisional

Probab=96.25  E-value=0.093  Score=53.76  Aligned_cols=81  Identities=19%  Similarity=0.290  Sum_probs=60.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc---eeeEEEEEecccccccccccCCCCCCcc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA---SCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA---qc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      +......+.+|+.+|+|+++|++...|.|-++|+.++..++.++|+..+   .|.|..   .                ..
T Consensus       164 l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~---~----------------~~  224 (493)
T PTZ00421        164 IKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK---R----------------KD  224 (493)
T ss_pred             EcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcC---C----------------CC
Confidence            5555667899999999999999999999999999999999999988764   455542   0                01


Q ss_pred             eEEEEE--cCCCCeEEEeecCCCCe
Q 021797          234 LCLAIH--APRKGIIEVWQMRTGPR  256 (307)
Q Consensus       234 l~LVIy--aprRg~lEVW~~~~G~R  256 (307)
                      +++..-  .-.+|.|.+|++++...
T Consensus       225 ~ivt~G~s~s~Dr~VklWDlr~~~~  249 (493)
T PTZ00421        225 LIITLGCSKSQQRQIMLWDTRKMAS  249 (493)
T ss_pred             eEEEEecCCCCCCeEEEEeCCCCCC
Confidence            122221  13478999999997653

>PTZ00420 coronin; Provisional

Probab=95.94  E-value=0.18  Score=52.82  Aligned_cols=89  Identities=15%  Similarity=0.234  Sum_probs=60.8

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc---eeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA---SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA---qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      ...+.+++.+|+|+++|++-..|.|.|+|+.++.+++.++|+...   .+-|+..... +              ...++.
T Consensus       167 ~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~-d--------------~~~IlT  231 (568)
T PTZ00420        167 PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGG-D--------------DNYILS  231 (568)
T ss_pred             CCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcC-C--------------CCEEEE
Confidence            346889999999999999888899999999999999999998763   4556542211 1              111222


Q ss_pred             EEcCCC--CeEEEeecCC-CCeEEEEEecC
Q 021797          238 IHAPRK--GIIEVWQMRT-GPRLLTIQCAK  264 (307)
Q Consensus       238 IyaprR--g~lEVW~~~~-G~RV~a~~v~~  264 (307)
                      .-.-+.  +.|.||++++ +.-+..+....
T Consensus       232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~  261 (568)
T PTZ00420        232 TGFSKNNMREMKLWDLKNTTSALVTMSIDN  261 (568)
T ss_pred             EEcCCCCccEEEEEECCCCCCceEEEEecC
Confidence            222221  4799999995 44455555443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=95.91  E-value=0.3  Score=43.21  Aligned_cols=78  Identities=21%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             eEEEECCCCCEE-EEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          165 ERLTLSPSGSLA-AITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       165 ~~I~lsP~~~lA-avtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      ..++++|+|+.+ ++....++|.++|+.++.+++.+....+.  ..+....+              . .  +|++-....
T Consensus        34 ~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~--------------g-~--~l~~~~~~~   94 (300)
T TIGR03866        34 RGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDP--ELFALHPN--------------G-K--ILYIANEDD   94 (300)
T ss_pred             CceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCc--cEEEECCC--------------C-C--EEEEEcCCC
Confidence            468999999865 55567899999999999998877653331  12211111              0 1  344555677


Q ss_pred             CeEEEeecCCCCeEEEEE
Q 021797          244 GIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~  261 (307)
                      +.|.+|+++++..+..+.
T Consensus        95 ~~l~~~d~~~~~~~~~~~  112 (300)
T TIGR03866        95 NLVTVIDIETRKVLAEIP  112 (300)
T ss_pred             CeEEEEECCCCeEEeEee
Confidence            899999999887776665

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]

Probab=95.85  E-value=0.079  Score=51.54  Aligned_cols=87  Identities=22%  Similarity=0.378  Sum_probs=67.6

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .-+-+.|.-||||++..++++-+-+.|+|.-+|.++.-+-+|+.+.--=+++.=.              ++.  -+|+-.
T Consensus       187 ~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft--------------Pds--~Fvl~g  250 (311)
T KOG1446|consen  187 EAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT--------------PDS--KFVLSG  250 (311)
T ss_pred             ccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC--------------CCC--cEEEEe
Confidence            3456789999999999999999999999999999999999998866111221111              111  145666


Q ss_pred             CCCCeEEEeecCCCCeEEEEEec
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      --+|.|-||++.+|.+|+.++-+
T Consensus       251 s~dg~i~vw~~~tg~~v~~~~~~  273 (311)
T KOG1446|consen  251 SDDGTIHVWNLETGKKVAVLRGP  273 (311)
T ss_pred             cCCCcEEEEEcCCCcEeeEecCC
Confidence            67899999999999999999854

>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]

Probab=95.77  E-value=0.065  Score=53.84  Aligned_cols=91  Identities=16%  Similarity=0.307  Sum_probs=74.3

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      -+.-...++..|||++|+|.+.-.--|=|+|-.+|.-+-.++|+=+|  ||+|..     |              .+  |
T Consensus       365 gHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsa-----D--------------sR--L  423 (480)
T KOG0271|consen  365 GHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSA-----D--------------SR--L  423 (480)
T ss_pred             chhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEecc-----C--------------cc--E
Confidence            34556789999999999999988899999999999999999999987  888873     2              12  7


Q ss_pred             EEEcCCCCeEEEeecCC----------CCeEEEEEecCCeEEec
Q 021797          237 AIHAPRKGIIEVWQMRT----------GPRLLTIQCAKGSKILQ  270 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~----------G~RV~a~~v~~~~~Ll~  270 (307)
                      ++...++-.|+||++++          ..-|+++.-.+.+..+.
T Consensus       424 lVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~  467 (480)
T KOG0271|consen  424 LVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVA  467 (480)
T ss_pred             EEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceee
Confidence            78999999999999985          45667776666655553

>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]

Probab=95.61  E-value=0.031  Score=59.39  Aligned_cols=91  Identities=21%  Similarity=0.381  Sum_probs=68.8

Q ss_pred             CCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          152 SPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       152 ~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      .|++.+-.+--....+..-||..|.|+--+.-+|=+||+.+|..||++-|++.    =|.+..-          +|-   
T Consensus       526 ~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~----~V~al~~----------Sp~---  588 (707)
T KOG0263|consen  526 KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKG----PVTALAF----------SPC---  588 (707)
T ss_pred             CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCC----ceEEEEE----------cCC---
Confidence            35555555555678899999999999998999999999999999999999877    3333221          111   


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       ..||+ -+--.|+|.||++.+|.+|..+.
T Consensus       589 -Gr~La-Sg~ed~~I~iWDl~~~~~v~~l~  616 (707)
T KOG0263|consen  589 -GRYLA-SGDEDGLIKIWDLANGSLVKQLK  616 (707)
T ss_pred             -CceEe-ecccCCcEEEEEcCCCcchhhhh
Confidence             11443 56679999999999999887654

>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]

Probab=95.55  E-value=0.06  Score=54.06  Aligned_cols=97  Identities=21%  Similarity=0.303  Sum_probs=75.5

Q ss_pred             CCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc-eeEEeecccccceeeEEEEEecccccccccccCCCC
Q 021797          151 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL-VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       151 a~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~-~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      .+|++...-++--..+|+.||||+++|..--.|-|.|+|-.+| ++.|-.+|++-    ||....=.-     .|..|  
T Consensus       147 eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K----~It~Lawep-----~hl~p--  215 (480)
T KOG0271|consen  147 ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKK----WITALAWEP-----LHLVP--  215 (480)
T ss_pred             CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCccc----ceeEEeecc-----cccCC--
Confidence            3677767778888999999999999999999999999998776 57799999999    997654211     01111  


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       ..+  ++-.+.++|.+.||++..|..+....
T Consensus       216 -~~r--~las~skDg~vrIWd~~~~~~~~~ls  244 (480)
T KOG0271|consen  216 -PCR--RLASSSKDGSVRIWDTKLGTCVRTLS  244 (480)
T ss_pred             -Ccc--ceecccCCCCEEEEEccCceEEEEec
Confidence             112  45678889999999999988887654

>PTZ00420 coronin; Provisional

Probab=95.33  E-value=0.22  Score=52.22  Aligned_cols=93  Identities=11%  Similarity=-0.033  Sum_probs=63.7

Q ss_pred             CCccccCCCceeeEEEECCCCCE-EEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSL-AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~l-AavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      |+..|..+.+.+..|+.+|++.. +|++...|.|.|||+.++..+..++..  ..+.-+...                ++
T Consensus       117 p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~--~~V~Slsws----------------pd  178 (568)
T PTZ00420        117 PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP--KKLSSLKWN----------------IK  178 (568)
T ss_pred             ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC--CcEEEEEEC----------------CC
Confidence            33346667788999999998865 456677899999999999887766532  122111111                01


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      ..  +++-+-.++.|.||++++|..+..+..-.+
T Consensus       179 G~--lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g  210 (568)
T PTZ00420        179 GN--LLSGTCVGKHMHIIDPRKQEIASSFHIHDG  210 (568)
T ss_pred             CC--EEEEEecCCEEEEEECCCCcEEEEEecccC
Confidence            12  234466789999999999999888765444

>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]

Probab=95.08  E-value=0.79  Score=45.84  Aligned_cols=145  Identities=19%  Similarity=0.138  Sum_probs=90.0

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEeccc-------cc-------cc-
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-------AA-------TS-  221 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~-------~~-------~~-  221 (307)
                      |..++-.+..+.-|-+|.|.|+.|--|.|++++..++...+..- |-=..+-|+.-.....       .+       .+ 
T Consensus       102 ltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~-~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~  180 (399)
T KOG0296|consen  102 LTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD-QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ  180 (399)
T ss_pred             ecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee-cccCceEEEEecccccEEEeecCCCcEEEEECCCc
Confidence            55567778889999999999999999999999999999877654 4555667775543221       00       00 


Q ss_pred             ---cc---ccC---CC--CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEeccCcccccccCCCCCcccEEE
Q 021797          222 ---SA---YYA---PV--KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVF  290 (307)
Q Consensus       222 ---~~---~~~---~~--k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~~~~~~~~~~~~~  290 (307)
                         +.   +..   .+  -++.-..+.-|-  +|+|.+|+..+|+-+..++-..+.-+-....+..+.-.-+.-..-++|
T Consensus       181 ~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~--dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~  258 (399)
T KOG0296|consen  181 ALCKVMSGHNSPCTCGEFIPDGKRILTGYD--DGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVAC  258 (399)
T ss_pred             ceeeEecCCCCCcccccccCCCceEEEEec--CceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEE
Confidence               00   000   00  012222456666  999999999999998888844433222222222221000112336789


Q ss_pred             EEeCCCCceEEEec
Q 021797          291 LLNGDSGQLSVLNR  304 (307)
Q Consensus       291 ll~~~~g~l~~in~  304 (307)
                      +++..+|.+.-.|.
T Consensus       259 ~~~~~sgKVv~~~n  272 (399)
T KOG0296|consen  259 GVNNGSGKVVNCNN  272 (399)
T ss_pred             EEccccceEEEecC
Confidence            99887776665554

>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]

Probab=94.92  E-value=0.35  Score=46.93  Aligned_cols=98  Identities=13%  Similarity=0.224  Sum_probs=79.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccc-ccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY-RDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGy-RDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      |.-+.+...+++++|+++-++..-..--|.|+|+-..+.+.|=.+. ||    |+....-          .|.+..   .
T Consensus       101 f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~----WVscvrf----------sP~~~~---p  163 (315)
T KOG0279|consen  101 FVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHRE----WVSCVRF----------SPNESN---P  163 (315)
T ss_pred             EEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcC----cEEEEEE----------cCCCCC---c
Confidence            7778899999999999999999888899999999999999999998 99    9976532          122212   3


Q ss_pred             EEEEcCCCCeEEEeecCCCCe----------EEEEEecCCeEEecc
Q 021797          236 LAIHAPRKGIIEVWQMRTGPR----------LLTIQCAKGSKILQP  271 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~R----------V~a~~v~~~~~Ll~~  271 (307)
                      .++-+.-++.|+||++++.+-          |-+++|++.+-|.-.
T Consensus       164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas  209 (315)
T KOG0279|consen  164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS  209 (315)
T ss_pred             EEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEec
Confidence            678899999999999997553          556677777777644

>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]

Probab=94.82  E-value=0.031  Score=57.71  Aligned_cols=77  Identities=23%  Similarity=0.382  Sum_probs=57.4

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc-ceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD-ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD-Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      --+..++++||-+++-.+=+.|-|.+||+.+-.+||-+|||-| |.|  |.+..++                  .-.--.
T Consensus       510 paCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGasc--Idis~dG------------------tklWTG  569 (705)
T KOG0639|consen  510 PACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC--IDISKDG------------------TKLWTG  569 (705)
T ss_pred             hhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCcee--EEecCCC------------------ceeecC
Confidence            3456788999999888888889999999999999999999998 333  2211111                  011224


Q ss_pred             CCCCeEEEeecCCCCeEE
Q 021797          241 PRKGIIEVWQMRTGPRLL  258 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~  258 (307)
                      ..++.|..||+|+|..+.
T Consensus       570 GlDntvRcWDlregrqlq  587 (705)
T KOG0639|consen  570 GLDNTVRCWDLREGRQLQ  587 (705)
T ss_pred             CCccceeehhhhhhhhhh
Confidence            458899999999998764

>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]

Probab=94.59  E-value=0.2  Score=50.64  Aligned_cols=93  Identities=23%  Similarity=0.314  Sum_probs=68.7

Q ss_pred             CceeeEEEECCCCCEEEEE--cCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          161 PRKGERLTLSPSGSLAAIT--DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavt--DslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      .+...+|+--|+|.||++.  |++|||  +|+.+|.-|-..-|+=+.=. =+...                  +.-|.++
T Consensus       303 s~~v~~iaf~~DGSL~~tGGlD~~~Rv--WDlRtgr~im~L~gH~k~I~-~V~fs------------------PNGy~lA  361 (459)
T KOG0272|consen  303 SKGVFSIAFQPDGSLAATGGLDSLGRV--WDLRTGRCIMFLAGHIKEIL-SVAFS------------------PNGYHLA  361 (459)
T ss_pred             ccccceeEecCCCceeeccCccchhhe--eecccCcEEEEeccccccee-eEeEC------------------CCceEEe
Confidence            4567789999999999994  999996  89999999998888766211 11110                  1227888


Q ss_pred             EcCCCCeEEEeecCCCCeEEEEEe------------cCCeEEeccCcc
Q 021797          239 HAPRKGIIEVWQMRTGPRLLTIQC------------AKGSKILQPTYR  274 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV~a~~v------------~~~~~Ll~~~~~  274 (307)
                      -..-+++..||++|--.-++++-.            ..|+.|+.++|-
T Consensus       362 Tgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD  409 (459)
T KOG0272|consen  362 TGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD  409 (459)
T ss_pred             ecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccC
Confidence            889999999999997777666542            246677766554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=94.56  E-value=0.24  Score=52.76  Aligned_cols=82  Identities=17%  Similarity=0.185  Sum_probs=61.2

Q ss_pred             eeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      .+.+++.+| +++++|+++..|.|.|||+.++..++.++|+.+.    |....-.            ..+.  -+++-+.
T Consensus       534 ~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~----V~~l~~~------------p~~~--~~L~Sgs  595 (793)
T PLN00181        534 KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKR----VWSIDYS------------SADP--TLLASGS  595 (793)
T ss_pred             ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCC----EEEEEEc------------CCCC--CEEEEEc
Confidence            466788877 5789999999999999999999999999999873    2211100            0011  1456667


Q ss_pred             CCCeEEEeecCCCCeEEEEEe
Q 021797          242 RKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v  262 (307)
                      .+|.|.||+++++..+..+..
T Consensus       596 ~Dg~v~iWd~~~~~~~~~~~~  616 (793)
T PLN00181        596 DDGSVKLWSINQGVSIGTIKT  616 (793)
T ss_pred             CCCEEEEEECCCCcEEEEEec
Confidence            799999999999988877764

>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]

Probab=94.53  E-value=0.15  Score=49.85  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=62.3

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      -.+.-.++++-+..+-..-||..+|+++|..+|=.||+-+    ++....+.              ++.+.||.-+.-+|
T Consensus        94 M~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~----~vNs~~p~--------------rrg~~lv~SgsdD~  155 (338)
T KOG0265|consen   94 MELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTS----FVNSLDPS--------------RRGPQLVCSGSDDG  155 (338)
T ss_pred             EeeeeccCCCEEEEecCCceEEEEecccceeeehhccccc----eeeecCcc--------------ccCCeEEEecCCCc
Confidence            3455667788888888889999999999999999999998    88766542              35678999999999


Q ss_pred             eEEEeecCCCCeEEE
Q 021797          245 IIEVWQMRTGPRLLT  259 (307)
Q Consensus       245 ~lEVW~~~~G~RV~a  259 (307)
                      .+.|||||....+-+
T Consensus       156 t~kl~D~R~k~~~~t  170 (338)
T KOG0265|consen  156 TLKLWDIRKKEAIKT  170 (338)
T ss_pred             eEEEEeecccchhhc
Confidence            999999995444333

>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]

Probab=94.42  E-value=0.17  Score=48.36  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=66.9

Q ss_pred             CCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCC
Q 021797          151 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       151 a~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      .+.+....-..+++....++-++.-+|..-..--|.+||+.+|.++|=|.|+ +||+-=+...|+.              
T Consensus        49 g~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH-~aqVNtV~fNees--------------  113 (307)
T KOG0316|consen   49 GALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGH-LAQVNTVRFNEES--------------  113 (307)
T ss_pred             cceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccc-cceeeEEEecCcc--------------
Confidence            4556667888999999999998877777666778999999999999999998 6777666654331              


Q ss_pred             CcceEEEEEcCCCCeEEEeecCC
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~  253 (307)
                          -.|..+.-+..+.+|++|.
T Consensus       114 ----SVv~SgsfD~s~r~wDCRS  132 (307)
T KOG0316|consen  114 ----SVVASGSFDSSVRLWDCRS  132 (307)
T ss_pred             ----eEEEeccccceeEEEEccc
Confidence                2566777788899999885

>KOG0282 consensus mRNA splicing factor [Function unknown]

Probab=94.33  E-value=0.12  Score=52.97  Aligned_cols=111  Identities=20%  Similarity=0.312  Sum_probs=81.7

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCC-ceeEEeecccccce--eeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQA-LVVVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~-~~ivRmWKGyRDAq--c~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +.+++.-+.+|...| .+.|++..-..|.|.|+|+-. +..||-+.|++.+=  ..|-+                   +.
T Consensus       210 ~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-------------------~g  270 (503)
T KOG0282|consen  210 LSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-------------------CG  270 (503)
T ss_pred             ccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-------------------cC
Confidence            677777788999999 899999999999999999998 99999999998731  11111                   11


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEeccCcccccccCCCCCcc--cEEEEEeCCCCceEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVP--LEVFLLNGDSGQLSV  301 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~~~~~~~~~--~~~~ll~~~~g~l~~  301 (307)
                      .-|  .-+.-++.|.+||+.+|+.+..|+.++--.-+             .+||  ++.+|..++||.|+.
T Consensus       271 ~~f--LS~sfD~~lKlwDtETG~~~~~f~~~~~~~cv-------------kf~pd~~n~fl~G~sd~ki~~  326 (503)
T KOG0282|consen  271 TSF--LSASFDRFLKLWDTETGQVLSRFHLDKVPTCV-------------KFHPDNQNIFLVGGSDKKIRQ  326 (503)
T ss_pred             Cee--eeeecceeeeeeccccceEEEEEecCCCceee-------------ecCCCCCcEEEEecCCCcEEE
Confidence            113  56778999999999999999999955321111             2344  466666677776653

>KOG2727 consensus Rab3 GTPase-activating protein, non-catalytic subunit [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.19  E-value=0.058  Score=58.99  Aligned_cols=117  Identities=34%  Similarity=0.549  Sum_probs=80.9

Q ss_pred             CceEEEEechhHHHHHHHHHHhhccccCCCCCccCCcccccCCCCCccccccccCCCcceeeeEEeccC----------C
Q 021797            2 PGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLM----------P   71 (307)
Q Consensus         2 ~~~i~~i~G~~l~~~L~~c~~q~~~~~~~~~~~~~~~~~~~~~~~~L~ykKW~~~~~~~i~Daa~~G~~----------~   71 (307)
                      |+...+.|+...+.+.+...++.+...|+++.+.++.....+-..+|+|..|+..+-.++-|..+.+++          +
T Consensus       158 ~g~sl~~~L~ncq~~Vqkaa~Eknsn~~~~~~~~qk~~l~qdi~~~I~hai~~~~~~ppt~Dq~vtas~~~gy~a~~k~S  237 (1244)
T KOG2727|consen  158 PGVSLRFDLSNCQSMVQKAAQEKNSNFWDQKNRKQKAELTQDIYQRIPHAIWNVNKNPPTVDQTVTASMPPGYLALQKPS  237 (1244)
T ss_pred             CCchhhhhHHHHHHHHHHHHHhccCCcCCccchhhhhhcccchhhccchheeecccCCccHHHhhhcccCchhhhhccCC
Confidence            567778899999999999999999999999998887555455568899999999888888888877765          3


Q ss_pred             CCchhh--hcc-c---cceeEEEecCCceeEEEeecCCCCcchhhHHHhhhhhHHHHHHHhhh
Q 021797           72 PPLMEV--QSS-Q---RYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLS  128 (307)
Q Consensus        72 pp~~~~--~s~-~---~~~~~i~vG~~P~la~y~~~~~~~~s~~~a~~s~va~Av~s~~~s~a  128 (307)
                      ||.+.+  ..+ +   ++|.+--=-..|.++-          ....++|-+++-.++..++..
T Consensus       238 pPrySq~vt~ge~pf~gFf~a~eg~~~~llg~----------Vak~v~s~A~sn~asg~fgi~  290 (1244)
T KOG2727|consen  238 PPRYSQAVTIGEDPFIGFFRASEGRGRSLLGA----------VAKKVVSAAASNIASGSFGIW  290 (1244)
T ss_pred             CcceeeeEEecCCceeeeeeeccccccccHHH----------HHHHhhhhhhhhhhhheeecc
Confidence            777777  222 2   4443322122232221          122355556666666676664

>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]

Probab=94.15  E-value=0.078  Score=53.46  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=66.4

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      .+..++.||+-..++.+-..|+|.|+|.....-=|+..|+     +|-....+-.         |.|     -|+.-+.+
T Consensus       182 aIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GH-----gwdVksvdWH---------P~k-----gLiasgsk  242 (464)
T KOG0284|consen  182 AIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGH-----GWDVKSVDWH---------PTK-----GLIASGSK  242 (464)
T ss_pred             hhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccC-----CCCcceeccC---------Ccc-----ceeEEccC
Confidence            4667899998777777777899999999988887777665     2332222211         112     48899999


Q ss_pred             CCeEEEeecCCCCeEEEEEecCCeEE
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAKGSKI  268 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~~~~L  268 (307)
                      +.+|++||.++|.+|++.+.-|++.|
T Consensus       243 DnlVKlWDprSg~cl~tlh~HKntVl  268 (464)
T KOG0284|consen  243 DNLVKLWDPRSGSCLATLHGHKNTVL  268 (464)
T ss_pred             CceeEeecCCCcchhhhhhhccceEE
Confidence            99999999999999999998887654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=94.15  E-value=1  Score=44.61  Aligned_cols=76  Identities=17%  Similarity=0.158  Sum_probs=58.7

Q ss_pred             CC-CCCEEEEEcCC-----CcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC--
Q 021797          170 SP-SGSLAAITDSL-----GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP--  241 (307)
Q Consensus       170 sP-~~~lAavtDsl-----GRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap--  241 (307)
                      -| +++++-++|.-     |||.+||..++.++.|+..-+..+.  + +  ..|             ..  +|.+=.+  
T Consensus         8 ~~~~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~--~-~--spD-------------g~--~lyva~~~~   67 (352)
T TIGR02658         8 PASDARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP--V-V--ASD-------------GS--FFAHASTVY   67 (352)
T ss_pred             CCCCCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCce--e-E--CCC-------------CC--EEEEEeccc
Confidence            44 78899999986     9999999999999999987665553  2 1  111             11  3456566  


Q ss_pred             -------CCCeEEEeecCCCCeEEEEEecCC
Q 021797          242 -------RKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       242 -------rRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                             +.+.|+|||++++.-+.-+.++..
T Consensus        68 ~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~   98 (352)
T TIGR02658        68 SRIARGKRTDYVEVIDPQTHLPIADIELPEG   98 (352)
T ss_pred             cccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence                   889999999999999988887655

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]

Probab=94.05  E-value=0.32  Score=46.78  Aligned_cols=88  Identities=17%  Similarity=0.155  Sum_probs=63.9

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceee--EEEEEecccccccccccCCCCC
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV--FMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~--Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      |++-|.-..|++.+.-+||+++|.|++.+.--|-++++.+.     +|+-+--+|+  |+.--.=.             .
T Consensus       207 P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-----~kle~~l~gh~rWvWdc~FS-------------~  268 (311)
T KOG0315|consen  207 PVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-----FKLELVLTGHQRWVWDCAFS-------------A  268 (311)
T ss_pred             EhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-----eeeEEEeecCCceEEeeeec-------------c
Confidence            33347778999999999999999999999999999999987     3444444444  87632211             1


Q ss_pred             CcceEEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                      +. .|||- +..++...+|++..|+.|...
T Consensus       269 dg-~YlvT-assd~~~rlW~~~~~k~v~qy  296 (311)
T KOG0315|consen  269 DG-EYLVT-ASSDHTARLWDLSAGKEVRQY  296 (311)
T ss_pred             Cc-cEEEe-cCCCCceeecccccCceeeec
Confidence            11 15655 555799999999999977653

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=93.69  E-value=0.12  Score=33.42  Aligned_cols=36  Identities=25%  Similarity=0.389  Sum_probs=32.5

Q ss_pred             CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEE
Q 021797          154 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLD  189 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD  189 (307)
                      +..|......+.+|+.+|+++++|++...|.|.++|
T Consensus         4 ~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    4 VRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            445788889999999999999999999999999987

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0286 consensus G-protein beta subunit [General function prediction only]

Probab=93.60  E-value=1.4  Score=43.12  Aligned_cols=109  Identities=15%  Similarity=0.182  Sum_probs=72.0

Q ss_pred             CCCCccccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCC
Q 021797          151 ASPLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       151 a~pl~~l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      +-....|.++.-.+-+|.++| ++++++..--.+--.|+|+..+..++++-|+-. .+-=+..+.+++            
T Consensus       176 g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes-DINsv~ffP~G~------------  242 (343)
T KOG0286|consen  176 GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES-DINSVRFFPSGD------------  242 (343)
T ss_pred             ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccccc-ccceEEEccCCC------------
Confidence            334456889999999999999 899999988888889999999999999988854 111111111110            


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCCCCeEEEEE------------ecCCeEEeccCcccccc
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ------------CAKGSKILQPTYRFGSS  278 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~------------v~~~~~Ll~~~~~~~~~  278 (307)
                            =+.--.-++...++++|..+-++.+.            -++.+|||.++|.=..+
T Consensus       243 ------afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c  297 (343)
T KOG0286|consen  243 ------AFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTC  297 (343)
T ss_pred             ------eeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCce
Confidence                  11222334555666666655555443            45678888777664443

>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]

Probab=93.19  E-value=0.69  Score=49.65  Aligned_cols=83  Identities=17%  Similarity=0.267  Sum_probs=65.3

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      +..++.+++++|+.+|+|+.--.--.=|+|+.++.++-+.+|+|.-  -|-.-+...              |   -++--
T Consensus       462 HdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RG--vw~V~Fs~~--------------d---q~laT  522 (775)
T KOG0319|consen  462 HDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRG--VWCVSFSKN--------------D---QLLAT  522 (775)
T ss_pred             hcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccc--eEEEEeccc--------------c---ceeEe
Confidence            3577999999999999999866666677777799999999999982  133222221              2   25667


Q ss_pred             cCCCCeEEEeecCCCCeEEEEE
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +.-+..|+||.+.++.++-+|.
T Consensus       523 ~SgD~TvKIW~is~fSClkT~e  544 (775)
T KOG0319|consen  523 CSGDKTVKIWSISTFSCLKTFE  544 (775)
T ss_pred             ccCCceEEEEEeccceeeeeec
Confidence            7789999999999999999998

>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]

Probab=93.12  E-value=1.6  Score=47.25  Aligned_cols=83  Identities=14%  Similarity=0.209  Sum_probs=61.1

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      ...+++.||||++.|+.-..|.|=++|++.|..+--+-=+-.+--+.--. .                  ....+.-+..
T Consensus       352 ~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~-~------------------~g~~llssSL  412 (893)
T KOG0291|consen  352 RITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFT-A------------------RGNVLLSSSL  412 (893)
T ss_pred             ceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEE-e------------------cCCEEEEeec
Confidence            46789999999999999999999999999987665553333322221111 0                  1135678889


Q ss_pred             CCeEEEeecCCCCeEEEEEecC
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +|.|..||+..++.--+|+.+.
T Consensus       413 DGtVRAwDlkRYrNfRTft~P~  434 (893)
T KOG0291|consen  413 DGTVRAWDLKRYRNFRTFTSPE  434 (893)
T ss_pred             CCeEEeeeecccceeeeecCCC
Confidence            9999999999988888887554

>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]

Probab=93.10  E-value=0.79  Score=44.53  Aligned_cols=91  Identities=21%  Similarity=0.274  Sum_probs=66.9

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      |+..|.-+--.++.+.++|+|++|...-..|-+.|+|+.+|.--|.+-|+-.-   =+.+.-+.|+              
T Consensus        55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~d---Vlsva~s~dn--------------  117 (315)
T KOG0279|consen   55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKD---VLSVAFSTDN--------------  117 (315)
T ss_pred             eeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCc---eEEEEecCCC--------------
Confidence            33335455667888999999999999999999999999999999999998541   1122112111              


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .  -++-..|+..|.+|++. |.+.+++.=+
T Consensus       118 ~--qivSGSrDkTiklwnt~-g~ck~t~~~~  145 (315)
T KOG0279|consen  118 R--QIVSGSRDKTIKLWNTL-GVCKYTIHED  145 (315)
T ss_pred             c--eeecCCCcceeeeeeec-ccEEEEEecC
Confidence            1  34788899999999996 6666666533

>KOG1273 consensus WD40 repeat protein [General function prediction only]

Probab=92.84  E-value=0.44  Score=47.11  Aligned_cols=86  Identities=20%  Similarity=0.272  Sum_probs=66.9

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .|..- .+++..+|+|.+.|+.=..|||+++|..+..+-||.-|+=.+=|.=-..                 ++.+  +.
T Consensus        21 ld~~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS-----------------~dgr--~L   80 (405)
T KOG1273|consen   21 LDNPL-AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWS-----------------RDGR--KL   80 (405)
T ss_pred             ccCCc-cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEec-----------------CCCC--Ee
Confidence            34333 8999999999999999999999999999999999998876643332221                 1122  44


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .-+.|+..+..|++..|..+.-|..+
T Consensus        81 ltsS~D~si~lwDl~~gs~l~rirf~  106 (405)
T KOG1273|consen   81 LTSSRDWSIKLWDLLKGSPLKRIRFD  106 (405)
T ss_pred             eeecCCceeEEEeccCCCceeEEEcc
Confidence            67889999999999999888877754

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=92.52  E-value=1.2  Score=44.02  Aligned_cols=80  Identities=19%  Similarity=0.163  Sum_probs=51.4

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      ..+..+|+|+++-++...|.|.+||+.++.+++-.|--.++..  +.+..+            +   +.++-.-|.  .+
T Consensus        40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~--i~~s~D------------G---~~~~v~n~~--~~  100 (369)
T PF02239_consen   40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRG--IAVSPD------------G---KYVYVANYE--PG  100 (369)
T ss_dssp             EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEE--EEE--T------------T---TEEEEEEEE--TT
T ss_pred             eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcce--EEEcCC------------C---CEEEEEecC--CC
Confidence            4467899999999998889999999999999998887777544  222111            1   122222333  47


Q ss_pred             eEEEeecCCCCeEEEEEec
Q 021797          245 IIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       245 ~lEVW~~~~G~RV~a~~v~  263 (307)
                      .+.|+|.++.+-+..+.++
T Consensus       101 ~v~v~D~~tle~v~~I~~~  119 (369)
T PF02239_consen  101 TVSVIDAETLEPVKTIPTG  119 (369)
T ss_dssp             EEEEEETTT--EEEEEE--
T ss_pred             ceeEeccccccceeecccc
Confidence            8888888888777777654

...

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=92.24  E-value=1.4  Score=39.38  Aligned_cols=81  Identities=17%  Similarity=0.343  Sum_probs=54.8

Q ss_pred             eeeEEEECCCCCEEEEE--cCC-CcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          163 KGERLTLSPSGSLAAIT--DSL-GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavt--Dsl-GRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....|.-||+|+++|++  +++ |.|-++|+.+...|.-.+-.---.|.|-.     +            . +.+.-+.-
T Consensus       102 ~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsP-----d------------G-r~~~ta~t  163 (194)
T PF08662_consen  102 PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSP-----D------------G-RYLATATT  163 (194)
T ss_pred             CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcC-----C------------C-CEEEEEEe
Confidence            34579999999999986  355 99999999999998877655444444431     1            1 12122233


Q ss_pred             cCC---CCeEEEeecCCCCeEEEEEe
Q 021797          240 APR---KGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       240 apr---Rg~lEVW~~~~G~RV~a~~v  262 (307)
                      +||   .+-+.||+. +|..+.....
T Consensus       164 ~~r~~~dng~~Iw~~-~G~~l~~~~~  188 (194)
T PF08662_consen  164 SPRLRVDNGFKIWSF-QGRLLYKKPF  188 (194)
T ss_pred             ccceeccccEEEEEe-cCeEeEecch
Confidence            344   366889999 5998887664

>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]

Probab=92.18  E-value=1.1  Score=48.48  Aligned_cols=99  Identities=20%  Similarity=0.279  Sum_probs=67.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      -.|.+-.+.+|++||+|+++.++|--||.+|+.+.+..+++-++=-|-.+|  |+...+                .. |+
T Consensus        51 ~~e~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk~~v~~--i~fSPn----------------g~-~f  111 (893)
T KOG0291|consen   51 PLETRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFKRGVGA--IKFSPN----------------GK-FF  111 (893)
T ss_pred             EeecCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEeecCccce--EEECCC----------------Cc-EE
Confidence            356677899999999999999999999999999999999976644444222  222111                11 43


Q ss_pred             EEEcCCCCeEEEeecCCCCe------------------EEEEEecCCeEEeccCcccc
Q 021797          237 AIHAPRKGIIEVWQMRTGPR------------------LLTIQCAKGSKILQPTYRFG  276 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~R------------------V~a~~v~~~~~Ll~~~~~~~  276 (307)
                      ++  ..-++||||....-.|                  |..+.=.-.+|+|-.+++=+
T Consensus       112 av--~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~  167 (893)
T KOG0291|consen  112 AV--GCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDL  167 (893)
T ss_pred             EE--EecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccc
Confidence            33  4567889998875444                  34444556777776655533

>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=92.17  E-value=0.85  Score=44.01  Aligned_cols=95  Identities=18%  Similarity=0.252  Sum_probs=71.3

Q ss_pred             CCCCccccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCC
Q 021797          151 ASPLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       151 a~pl~~l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      +.|++++.+++|++.++--.+ +++-..++.=.|-|=|+|-.+..-|+-++|+++.=.+=+  ..+              
T Consensus        94 s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~--~sp--------------  157 (311)
T KOG0277|consen   94 SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAA--FSP--------------  157 (311)
T ss_pred             CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEe--cCC--------------
Confidence            568999999999999999999 456666677789999999999999999999988421111  111              


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCC-CCeEEEEEecC
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRT-GPRLLTIQCAK  264 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~-G~RV~a~~v~~  264 (307)
                      ...  =|+-++.-+|.+.+|+++. |.+.. |.+..
T Consensus       158 ~~~--nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~  190 (311)
T KOG0277|consen  158 HIP--NLFASASGDGTLRLWDVRSPGKFMS-IEAHN  190 (311)
T ss_pred             CCC--CeEEEccCCceEEEEEecCCCceeE-EEecc
Confidence            112  2668999999999999987 44433 55443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=92.13  E-value=1.6  Score=43.19  Aligned_cols=91  Identities=11%  Similarity=0.043  Sum_probs=60.7

Q ss_pred             ECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeeccccc--ceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          169 LSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKGYRD--ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       169 lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWKGyRD--Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +||+|+.+.++.+          -+.|.+||++++.+++-..-=-+  +|++=...         ...-++  ..+  +|
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~---------~~~ls~--dgk--~l  119 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPW---------MTSLTP--DNK--TL  119 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccc---------eEEECC--CCC--EE
Confidence            9999988777666          69999999999999986541111  11110000         000000  112  45


Q ss_pred             EEEcCC-CCeEEEeecCCCCeEEEEEecCCeEEeccCc
Q 021797          237 AIHAPR-KGIIEVWQMRTGPRLLTIQCAKGSKILQPTY  273 (307)
Q Consensus       237 VIyapr-Rg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~  273 (307)
                      .|+-=- .+.|-|.|+.++..+..+.| ++|.++|++.
T Consensus       120 ~V~n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t~  156 (352)
T TIGR02658       120 LFYQFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPTA  156 (352)
T ss_pred             EEecCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEec
Confidence            555533 89999999999999999999 5599999863

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1407 consensus WD40 repeat protein [Function unknown]

Probab=92.01  E-value=0.62  Score=45.03  Aligned_cols=92  Identities=21%  Similarity=0.316  Sum_probs=66.9

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      |+..|.-++-.+..|..+|+|+++|+.-...-|.|+|+..++.+|+.-     .+-|=.-...   -         ..+.
T Consensus       181 pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~is-----RldwpVRTlS---F---------S~dg  243 (313)
T KOG1407|consen  181 PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCIS-----RLDWPVRTLS---F---------SHDG  243 (313)
T ss_pred             cccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeec-----cccCceEEEE---e---------ccCc
Confidence            445566667778899999999999998888889999999999999972     2223211110   0         0011


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .  +.-.|.-+..|+|=.+++|.||.-+.+.
T Consensus       244 ~--~lASaSEDh~IDIA~vetGd~~~eI~~~  272 (313)
T KOG1407|consen  244 R--MLASASEDHFIDIAEVETGDRVWEIPCE  272 (313)
T ss_pred             c--eeeccCccceEEeEecccCCeEEEeecc
Confidence            1  3356788899999999999999988853

>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]

Probab=91.72  E-value=3.9  Score=41.26  Aligned_cols=107  Identities=14%  Similarity=0.154  Sum_probs=69.5

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEe--------ccccc-------
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV--------NKDAA-------  219 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~--------~~~~~-------  219 (307)
                      ..|.-+---+.+|.++|.+.|++.....+-|=++|+++|...--.-|+-. +|-=+-+..        ..|+.       
T Consensus       145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~-~vr~vavS~rHpYlFs~gedk~VKCwDLe  223 (460)
T KOG0285|consen  145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIE-TVRGVAVSKRHPYLFSAGEDKQVKCWDLE  223 (460)
T ss_pred             hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhh-eeeeeeecccCceEEEecCCCeeEEEech
Confidence            44777778899999999999999999999999999999999888777643 111111100        00110       


Q ss_pred             ccc-c--ccCCCC------CCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          220 TSS-A--YYAPVK------SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       220 ~~~-~--~~~~~k------~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      .++ +  .++.-.      -++.|=.++-+.|+..+.|||||+-.-|.++.-
T Consensus       224 ~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~G  275 (460)
T KOG0285|consen  224 YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSG  275 (460)
T ss_pred             hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecC
Confidence            000 0  001000      011222344488999999999999988888763

>PRK03629 tolB translocation protein TolB; Provisional

Probab=91.45  E-value=2.7  Score=41.77  Aligned_cols=51  Identities=20%  Similarity=0.364  Sum_probs=35.8

Q ss_pred             CCceeeEEEECCCCCEEEEE-cCCC--cEEEEEcCCceeEEeeccc-ccceeeEE
Q 021797          160 HPRKGERLTLSPSGSLAAIT-DSLG--RILLLDTQALVVVRLWKGY-RDASCVFM  210 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavt-DslG--RV~LiD~~~~~ivRmWKGy-RDAqc~Wi  210 (307)
                      .++.......||+|+.++.+ +..|  +|.++|+.++.+.++..+. .+....|.
T Consensus       241 ~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wS  295 (429)
T PRK03629        241 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF  295 (429)
T ss_pred             CCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEEC
Confidence            34444567899999877664 5455  6999999999998888763 33444443

>KOG1912 consensus WD40 repeat protein [General function prediction only]

Probab=91.43  E-value=0.67  Score=50.39  Aligned_cols=68  Identities=26%  Similarity=0.427  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCCcEEEEEcCCceeEEeecccc-c--ceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEe
Q 021797          173 GSLAAITDSLGRILLLDTQALVVVRLWKGYR-D--ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVW  249 (307)
Q Consensus       173 ~~lAavtDslGRV~LiD~~~~~ivRmWKGyR-D--Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW  249 (307)
                      .=+.|++|-.|||+|+|...+.++- |=-.- |  -++.|+......               +.+.|+||.|  ..|-+|
T Consensus        79 ~lliAsaD~~GrIil~d~~~~s~~~-~l~~~~~~~qdl~W~~~rd~S---------------rd~LlaIh~s--s~lvLw  140 (1062)
T KOG1912|consen   79 QLLIASADISGRIILVDFVLASVIN-WLSHSNDSVQDLCWVPARDDS---------------RDVLLAIHGS--STLVLW  140 (1062)
T ss_pred             ceeEEeccccCcEEEEEehhhhhhh-hhcCCCcchhheeeeeccCcc---------------hheeEEecCC--cEEEEE
Confidence            4578899999999999998876543 31111 1  245566543221               2458999998  688999


Q ss_pred             ecCCCCeEE
Q 021797          250 QMRTGPRLL  258 (307)
Q Consensus       250 ~~~~G~RV~  258 (307)
                      +..+|.++-
T Consensus       141 ntdtG~k~W  149 (1062)
T KOG1912|consen  141 NTDTGEKFW  149 (1062)
T ss_pred             EccCCceee
Confidence            999998864

>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]

Probab=91.28  E-value=0.91  Score=48.74  Aligned_cols=86  Identities=21%  Similarity=0.343  Sum_probs=72.3

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ..|.-++|..-++.-||+.++.|++...+-|=++.+.+...+.-+.|++.|  .|.|+.   +            .+   
T Consensus       499 ~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~---~------------~~---  560 (775)
T KOG0319|consen  499 GVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIR---N------------GK---  560 (775)
T ss_pred             EEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeee---C------------Cc---
Confidence            358899999999999999999999999999999999999999999999997  455553   0            11   


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                         -.|.+--+|+|++|++.++.++.+..
T Consensus       561 ---qliS~~adGliKlWnikt~eC~~tlD  586 (775)
T KOG0319|consen  561 ---QLISAGADGLIKLWNIKTNECEMTLD  586 (775)
T ss_pred             ---EEEeccCCCcEEEEeccchhhhhhhh
Confidence               34899999999999999876554443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=91.07  E-value=0.33  Score=46.80  Aligned_cols=43  Identities=30%  Similarity=0.428  Sum_probs=39.5

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeec
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK  200 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK  200 (307)
                      .+..-.+-++.+||||++.|+...-|+|.|+++-+....|-||
T Consensus       226 ~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~  268 (282)
T PF15492_consen  226 GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK  268 (282)
T ss_pred             ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence            4556678899999999999999999999999999999999996

>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]

Probab=90.95  E-value=1.3  Score=47.21  Aligned_cols=96  Identities=18%  Similarity=0.222  Sum_probs=74.3

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      .+-.+-+++..|+|..++..+.-+-+.|+|..++.=+-=.+|+||    -+.+..-.+.+             .  =+|-
T Consensus       170 ~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd----NVr~ll~~dDG-------------t--~~ls  230 (735)
T KOG0308|consen  170 PKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD----NVRVLLVNDDG-------------T--RLLS  230 (735)
T ss_pred             CccceeeeecCCcceEEEecCcccceEEeccccccceeeeecccc----ceEEEEEcCCC-------------C--eEee
Confidence            344578899999999999999999999999998765555569999    77665543321             1  2378


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecCCe-EEeccCcc
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAKGS-KILQPTYR  274 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~~~-~Ll~~~~~  274 (307)
                      +..+|.|.+|++.+-++++++.+.+.+ =-|+.+..
T Consensus       231 ~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s  266 (735)
T KOG0308|consen  231 ASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS  266 (735)
T ss_pred             cCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence            999999999999999999999998753 33444433

>PLN00181 protein SPA1-RELATED; Provisional

Probab=90.89  E-value=3.3  Score=44.25  Aligned_cols=80  Identities=13%  Similarity=0.105  Sum_probs=57.3

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +..+...+.+|+.+| ++.+++++...|.|.|+|+.++..+..+++...  +.-+.....               +.  .
T Consensus       571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~--v~~v~~~~~---------------~g--~  631 (793)
T PLN00181        571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN--ICCVQFPSE---------------SG--R  631 (793)
T ss_pred             ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCC--eEEEEEeCC---------------CC--C
Confidence            556677789999998 789999999999999999999998888876422  111111110               01  1


Q ss_pred             EEEEcCCCCeEEEeecCCCC
Q 021797          236 LAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~  255 (307)
                      +++.+-..|.|.+|+++++.
T Consensus       632 ~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        632 SLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             EEEEEeCCCeEEEEECCCCC
Confidence            34567788999999998765

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=90.83  E-value=1.9  Score=42.59  Aligned_cols=102  Identities=17%  Similarity=0.227  Sum_probs=63.4

Q ss_pred             CCEEEEEc-CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeec
Q 021797          173 GSLAAITD-SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQM  251 (307)
Q Consensus       173 ~~lAavtD-slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~  251 (307)
                      +.|+.+++ .-|.|.+||..+..+++..+.--+..   ....-.              +|....+|+  .|.|.|-++|+
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h---~~~~~s--------------~Dgr~~yv~--~rdg~vsviD~   65 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPH---AGLKFS--------------PDGRYLYVA--NRDGTVSVIDL   65 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEE---EEEE-T--------------T-SSEEEEE--ETTSEEEEEET
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCce---eEEEec--------------CCCCEEEEE--cCCCeEEEEEC
Confidence            46777765 57999999999999999887543421   111111              112223333  57899999999


Q ss_pred             CCCCeEEEEEecCCeEEecc--Ccc--cccccCCCCCcccEEEEEeCCCCc
Q 021797          252 RTGPRLLTIQCAKGSKILQP--TYR--FGSSMASSPYVPLEVFLLNGDSGQ  298 (307)
Q Consensus       252 ~~G~RV~a~~v~~~~~Ll~~--~~~--~~~~~~~~~~~~~~~~ll~~~~g~  298 (307)
                      .+++.|..+.++.+.+=+.-  ..+  +.++     |.+.++.+||..+.+
T Consensus        66 ~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n-----~~~~~v~v~D~~tle  111 (369)
T PF02239_consen   66 ATGKVVATIKVGGNPRGIAVSPDGKYVYVAN-----YEPGTVSVIDAETLE  111 (369)
T ss_dssp             TSSSEEEEEE-SSEEEEEEE--TTTEEEEEE-----EETTEEEEEETTT--
T ss_pred             CcccEEEEEecCCCcceEEEcCCCCEEEEEe-----cCCCceeEecccccc
Confidence            99999999999876543322  111  2222     677788888876554

...

>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]

Probab=90.71  E-value=1.6  Score=44.95  Aligned_cols=103  Identities=15%  Similarity=0.229  Sum_probs=68.8

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecc---------ccc-----ccc---
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK---------DAA-----TSS---  222 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~---------~~~-----~~~---  222 (307)
                      -++..-+++..-||+|+|+.|.-|-|=++|..+..|+|..+++-. -.-.+......         |+-     .+.   
T Consensus        67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~a-pv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v  145 (487)
T KOG0310|consen   67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQA-PVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV  145 (487)
T ss_pred             hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccC-ceeEEEecccCCeEEEecCCCceEEEEEcCCcEE
Confidence            356677888889999999999999999999999899998887632 22222211110         000     000   


Q ss_pred             ----------cccCCCCCCcceEEEEEcCCCCeEEEeecCCC-CeEEEEEecC
Q 021797          223 ----------AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTG-PRLLTIQCAK  264 (307)
Q Consensus       223 ----------~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G-~RV~a~~v~~  264 (307)
                                .+...- .+.+-.+|+-...+|.|.+|++|.- +++..++.+.
T Consensus       146 ~~~l~~htDYVR~g~~-~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~  197 (487)
T KOG0310|consen  146 QAELSGHTDYVRCGDI-SPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGC  197 (487)
T ss_pred             EEEecCCcceeEeecc-ccCCCeEEEecCCCceEEEEEeccCCceeEEecCCC
Confidence                      000000 0112247888999999999999986 9999999663

>KOG1188 consensus WD40 repeat protein [General function prediction only]

Probab=90.50  E-value=1.1  Score=44.50  Aligned_cols=71  Identities=18%  Similarity=0.278  Sum_probs=58.3

Q ss_pred             CEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeec
Q 021797          174 SLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQM  251 (307)
Q Consensus       174 ~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~  251 (307)
                      +.+|+.=|-|-|-|+|..+|..++.+|||-++  +++|+...                   ....|+-+.-+|.|.+|++
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d-------------------s~h~v~s~ssDG~Vr~wD~  101 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD-------------------SPHGVISCSSDGTVRLWDI  101 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC-------------------CCCeeEEeccCCeEEEEEe
Confidence            67888888999999999999999999999875  45555311                   1248899999999999999


Q ss_pred             CCCCeEEEEEec
Q 021797          252 RTGPRLLTIQCA  263 (307)
Q Consensus       252 ~~G~RV~a~~v~  263 (307)
                      |...+++-+.-.
T Consensus       102 Rs~~e~a~~~~~  113 (376)
T KOG1188|consen  102 RSQAESARISWT  113 (376)
T ss_pred             ecchhhhheecc
Confidence            999888877644

>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]

Probab=89.88  E-value=1.8  Score=45.20  Aligned_cols=79  Identities=18%  Similarity=0.237  Sum_probs=54.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.|++-.+..|..||++.|+|++|.-+.|+|+|+++..+----       .+|+....+.-.      =+   ++-  -+
T Consensus       483 ~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~-------w~FHtakI~~~a------Ws---P~n--~~  544 (603)
T KOG0318|consen  483 LLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNR-------WAFHTAKINCVA------WS---PNN--KL  544 (603)
T ss_pred             eecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecce-------eeeeeeeEEEEE------eC---CCc--eE
Confidence            6677888999999999999999999999999999999983222       233332221100      00   000  24


Q ss_pred             EEEcCCCCeEEEeecCC
Q 021797          237 AIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~  253 (307)
                      |--...+-.|-||+|..
T Consensus       545 vATGSlDt~Viiysv~k  561 (603)
T KOG0318|consen  545 VATGSLDTNVIIYSVKK  561 (603)
T ss_pred             EEeccccceEEEEEccC
Confidence            55566677788898864

>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]

Probab=89.74  E-value=0.52  Score=48.44  Aligned_cols=52  Identities=21%  Similarity=0.324  Sum_probs=45.8

Q ss_pred             cCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecc
Q 021797          150 RASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG  201 (307)
Q Consensus       150 ~a~pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKG  201 (307)
                      ...|++.|.+++--.-++.-||+|+|.|..+..|+|.++++.++.+++-.+|
T Consensus       441 ~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~  492 (524)
T KOG0273|consen  441 SGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG  492 (524)
T ss_pred             CCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC
Confidence            3456677889999999999999999999999999999999999998876654

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=89.46  E-value=3  Score=37.17  Aligned_cols=79  Identities=16%  Similarity=0.249  Sum_probs=51.0

Q ss_pred             eeeEEEECCCCCEE-EEE-cCCCcEEEEEcCCceeEEee-cccccceeeEEEEEecccccccccccCCCCCCcceEEEE-
Q 021797          163 KGERLTLSPSGSLA-AIT-DSLGRILLLDTQALVVVRLW-KGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI-  238 (307)
Q Consensus       163 ~~~~I~lsP~~~lA-avt-DslGRV~LiD~~~~~ivRmW-KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI-  238 (307)
                      .+..++=+|+|+.+ +++ +.-++|.|+|+. +..+... ++.+. .+.|=.                .  ..  +|++ 
T Consensus        61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~~~n-~i~wsP----------------~--G~--~l~~~  118 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQPRN-TISWSP----------------D--GR--FLVLA  118 (194)
T ss_pred             ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecCCCce-EEEECC----------------C--CC--EEEEE
Confidence            38999999998654 443 455799999997 4444433 33443 233321                1  11  3444 


Q ss_pred             -EcCCCCeEEEeecCCCCeEEEEEec
Q 021797          239 -HAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       239 -yaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                       +.-..|.|++|+++...+|..+..+
T Consensus       119 g~~n~~G~l~~wd~~~~~~i~~~~~~  144 (194)
T PF08662_consen  119 GFGNLNGDLEFWDVRKKKKISTFEHS  144 (194)
T ss_pred             EccCCCcEEEEEECCCCEEeeccccC
Confidence             3344688999999999999888754

>KOG0295 consensus WD40 repeat-containing protein [Function unknown]

Probab=89.44  E-value=5.6  Score=40.01  Aligned_cols=116  Identities=14%  Similarity=0.160  Sum_probs=79.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEeccccc--------cc-------
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA--------TS-------  221 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~--------~~-------  221 (307)
                      +.-..-...+++.=|.|.+++..-..--|-.+|+.+|.-+..+-|+++    |+.+......+        ++       
T Consensus       189 ~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e----wvr~v~v~~DGti~As~s~dqtl~vW~~  264 (406)
T KOG0295|consen  189 LIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE----WVRMVRVNQDGTIIASCSNDQTLRVWVV  264 (406)
T ss_pred             hcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH----hEEEEEecCCeeEEEecCCCceEEEEEe
Confidence            444455678888999999999888888899999999999999999999    99887654221        00       


Q ss_pred             --c-------ccc---C----------------CCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecC---CeEEec
Q 021797          222 --S-------AYY---A----------------PVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK---GSKILQ  270 (307)
Q Consensus       222 --~-------~~~---~----------------~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~---~~~Ll~  270 (307)
                        .       .+.   +                .+..+.+.+ ..-+.|+++|++|+|++|.++.++----   .+.++.
T Consensus       265 ~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~-l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~  343 (406)
T KOG0295|consen  265 ATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQV-LGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFS  343 (406)
T ss_pred             ccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccE-EEeecccceEEEEeccCCeEEEEEecccceeeeeEEc
Confidence              0       000   0                000112234 3568899999999999999888775322   144555


Q ss_pred             cCccccc
Q 021797          271 PTYRFGS  277 (307)
Q Consensus       271 ~~~~~~~  277 (307)
                      |+.++.-
T Consensus       344 p~Gkyi~  350 (406)
T KOG0295|consen  344 PGGKYIL  350 (406)
T ss_pred             CCCeEEE
Confidence            5555433

>KOG0282 consensus mRNA splicing factor [Function unknown]

Probab=89.01  E-value=1  Score=46.29  Aligned_cols=67  Identities=19%  Similarity=0.326  Sum_probs=51.7

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ...+-.||||++++..|+.|+|..+|-.+-.++.-||+|-..  .+.|+...             +.       -||-+.
T Consensus       435 s~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e-------------~S-------kvat~~  494 (503)
T KOG0282|consen  435 SCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVE-------------PS-------KVATCG  494 (503)
T ss_pred             eeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCC-------------cc-------eeEecc
Confidence            356778999999999999999999999999999999999321  23454321             11       345666


Q ss_pred             CCCeEEEee
Q 021797          242 RKGIIEVWQ  250 (307)
Q Consensus       242 rRg~lEVW~  250 (307)
                      =.|.|.||+
T Consensus       495 w~G~Ikiwd  503 (503)
T KOG0282|consen  495 WDGLIKIWD  503 (503)
T ss_pred             cCceeEecC
Confidence            789999995

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=88.77  E-value=5.1  Score=45.68  Aligned_cols=92  Identities=20%  Similarity=0.270  Sum_probs=65.4

Q ss_pred             ccCCCce--eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRK--GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~--~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +.-..|+  +.+|++||.++|+++.-+-|-+.|||+.-+..|+-|+===+|   ||+-.+--.       .. .+.    
T Consensus      1189 lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~---~i~~v~~~~-------~~-~~~---- 1253 (1431)
T KOG1240|consen 1189 LKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARA---PIRHVWLCP-------TY-PQE---- 1253 (1431)
T ss_pred             hhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccC---CcceEEeec-------cC-CCC----
Confidence            3444455  689999999999999999999999999999999999743333   443222100       00 000    


Q ss_pred             EEEEEcC--CCCeEEEeecCCCCeEEEEEec
Q 021797          235 CLAIHAP--RKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       235 ~LVIyap--rRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .-.|.+.  --+-|++|+|-+|.|=.++-++
T Consensus      1254 S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s 1284 (1431)
T KOG1240|consen 1254 SVSVSAGSSSNNEVSTWNMETGLRQTVLWAS 1284 (1431)
T ss_pred             ceEEEecccCCCceeeeecccCcceEEEEcC
Confidence            1223333  3688999999999999999988

>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]

Probab=88.76  E-value=1.9  Score=41.34  Aligned_cols=86  Identities=14%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      +.+++.||+++-..++--.+-+=|+|-.+|.++..+||+-+-+..==-....              ++.   -||-..-+
T Consensus       186 it~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~q--------------sdt---hV~sgSED  248 (307)
T KOG0316|consen  186 ITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQ--------------SDT---HVFSGSED  248 (307)
T ss_pred             ceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecc--------------cce---eEEeccCC
Confidence            6789999998766666666778899999999999999998744321111101              122   57888999


Q ss_pred             CeEEEeecCCCCeEEEEEecCCe
Q 021797          244 GIIEVWQMRTGPRLLTIQCAKGS  266 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~v~~~~  266 (307)
                      |.+-+|++-.+.-+..+.++..-
T Consensus       249 G~Vy~wdLvd~~~~sk~~~~~~v  271 (307)
T KOG0316|consen  249 GKVYFWDLVDETQISKLSVVSTV  271 (307)
T ss_pred             ceEEEEEeccceeeeeeccCCce
Confidence            99999999999998888866543

>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]

Probab=88.52  E-value=9.6  Score=40.07  Aligned_cols=94  Identities=21%  Similarity=0.226  Sum_probs=69.7

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      ++-|+.|=..++--+|||.++|.+-+.|.|+|+|=.+|..+-...+ -+|.=+=|-...=             .+|...|
T Consensus       185 s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~-~~aHkGsIfalsW-------------sPDs~~~  250 (603)
T KOG0318|consen  185 SFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED-SDAHKGSIFALSW-------------SPDSTQF  250 (603)
T ss_pred             cccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC-CCCccccEEEEEE-------------CCCCceE
Confidence            4778888899999999999999999999999999999999988764 3333222211110             1122224


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      |-  +.-+-.++||++-++..+-++..+..
T Consensus       251 ~T--~SaDkt~KIWdVs~~slv~t~~~~~~  278 (603)
T KOG0318|consen  251 LT--VSADKTIKIWDVSTNSLVSTWPMGST  278 (603)
T ss_pred             EE--ecCCceEEEEEeeccceEEEeecCCc
Confidence            44  34467899999999999999998875

>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]

Probab=87.26  E-value=1.2  Score=45.11  Aligned_cols=42  Identities=17%  Similarity=0.186  Sum_probs=39.5

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA  205 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA  205 (307)
                      -.+++.||++.|+|+.-..|+|.+|++.++.+..+-|+-+..
T Consensus       390 wtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~  431 (459)
T KOG0288|consen  390 WTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN  431 (459)
T ss_pred             cceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCC
Confidence            667899999999999999999999999999999999998886

>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]

Probab=86.57  E-value=1.7  Score=43.35  Aligned_cols=85  Identities=15%  Similarity=0.157  Sum_probs=63.9

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .....++..|-++.-+..+...--|-+--+..|..++-++|+-.    ++.-.--+             .+.  .-+|.|
T Consensus       306 tkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS----yvn~a~ft-------------~dG--~~iisa  366 (508)
T KOG0275|consen  306 TKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS----YVNEATFT-------------DDG--HHIISA  366 (508)
T ss_pred             ccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc----cccceEEc-------------CCC--CeEEEe
Confidence            44567788888887666666666666778899999999999987    66421111             112  256999


Q ss_pred             CCCCeEEEeecCCCCeEEEEEecC
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ..+|.|+||+++++.++.+|+.+.
T Consensus       367 SsDgtvkvW~~KtteC~~Tfk~~~  390 (508)
T KOG0275|consen  367 SSDGTVKVWHGKTTECLSTFKPLG  390 (508)
T ss_pred             cCCccEEEecCcchhhhhhccCCC
Confidence            999999999999999999999654

>KOG0286 consensus G-protein beta subunit [General function prediction only]

Probab=86.19  E-value=6.3  Score=38.78  Aligned_cols=79  Identities=15%  Similarity=0.162  Sum_probs=59.1

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCc------eeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQAL------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~------~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      -+-..+.+|+|+++|+.-..--..++++.+.      .+.|+.+||+.    ++..-.-.+.+                .
T Consensus        99 WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtg----ylScC~f~dD~----------------~  158 (343)
T KOG0286|consen   99 WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTG----YLSCCRFLDDN----------------H  158 (343)
T ss_pred             eEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccc----eeEEEEEcCCC----------------c
Confidence            4667899999999999755555677787766      78899999998    66554322211                2


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +|-+.-+...-+|++.+|+++-.|+
T Consensus       159 ilT~SGD~TCalWDie~g~~~~~f~  183 (343)
T KOG0286|consen  159 ILTGSGDMTCALWDIETGQQTQVFH  183 (343)
T ss_pred             eEecCCCceEEEEEcccceEEEEec
Confidence            3556667788899999999999888

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=86.13  E-value=20  Score=33.51  Aligned_cols=28  Identities=4%  Similarity=0.016  Sum_probs=22.9

Q ss_pred             eEEEECCCCCEEEEE-cCCCcEEEEEcCC
Q 021797          165 ERLTLSPSGSLAAIT-DSLGRILLLDTQA  192 (307)
Q Consensus       165 ~~I~lsP~~~lAavt-DslGRV~LiD~~~  192 (307)
                      ..|+++|+|+++.++ ...|+|.++|+.+
T Consensus        83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~  111 (330)
T PRK11028         83 THISTDHQGRFLFSASYNANCVSVSPLDK  111 (330)
T ss_pred             eEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence            579999999876665 5689999999973

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=86.09  E-value=13  Score=34.70  Aligned_cols=27  Identities=7%  Similarity=0.158  Sum_probs=23.2

Q ss_pred             EEEECCCCCEEEEEcC-CCcEEEEEcCC
Q 021797          166 RLTLSPSGSLAAITDS-LGRILLLDTQA  192 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs-lGRV~LiD~~~  192 (307)
                      ++.++|+|+++.+++. .+.|.++|+..
T Consensus       179 ~~~~~pdg~~lyv~~~~~~~v~v~~~~~  206 (330)
T PRK11028        179 HMVFHPNQQYAYCVNELNSSVDVWQLKD  206 (330)
T ss_pred             eEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence            5899999998888765 89999999973

>KOG1539 consensus WD repeat protein [General function prediction only]

Probab=85.83  E-value=3.8  Score=44.81  Aligned_cols=111  Identities=14%  Similarity=0.135  Sum_probs=69.6

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecc---------ccccee----------eEEEEEecc-c
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG---------YRDASC----------VFMEMLVNK-D  217 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKG---------yRDAqc----------~Wi~~~~~~-~  217 (307)
                      +++++....|+++-.+++.+.++.-|-+..+|..+...+.-|+=         +|++.+          -.+.+.... -
T Consensus       490 ~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv  569 (910)
T KOG1539|consen  490 PAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV  569 (910)
T ss_pred             ccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence            58889999999999999999999999888888877775555531         111111          111100000 0


Q ss_pred             c----cccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEec
Q 021797          218 A----ATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ  270 (307)
Q Consensus       218 ~----~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~  270 (307)
                      +    .+++...-.-.+|..  -+|-|-.++.|.+||+.+|..|..+.++.-|+-+.
T Consensus       570 R~f~gh~nritd~~FS~Dgr--WlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls  624 (910)
T KOG1539|consen  570 REFWGHGNRITDMTFSPDGR--WLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLS  624 (910)
T ss_pred             HHhhccccceeeeEeCCCCc--EEEEeecCCcEEEEeccCcceeeeEecCCcceeeE
Confidence            0    000000000011221  45778889999999999999999999988776653

>KOG0295 consensus WD40 repeat-containing protein [Function unknown]

Probab=85.36  E-value=4.6  Score=40.62  Aligned_cols=116  Identities=18%  Similarity=0.166  Sum_probs=79.5

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEeccccc---cc----------
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA---TS----------  221 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~---~~----------  221 (307)
                      +++.-.+-.+.++..-|+--+.+++-..+-|-++|..+|.+.|-.|||-|+ ..=|.+...+..-   ++          
T Consensus       102 ~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~s-v~di~~~a~Gk~l~tcSsDl~~~LWd~~  180 (406)
T KOG0295|consen  102 QKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDS-VFDISFDASGKYLATCSSDLSAKLWDFD  180 (406)
T ss_pred             hhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccc-eeEEEEecCccEEEecCCccchhheeHH
Confidence            446666777888999999999999988999999999999999999999999 4444443322100   00          


Q ss_pred             --------ccccCCCCCC----cceEEEEEcCCCCeEEEeecCCCCeEEEEE----------ecCCeEEecc
Q 021797          222 --------SAYYAPVKSD----YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ----------CAKGSKILQP  271 (307)
Q Consensus       222 --------~~~~~~~k~~----~~l~LVIyaprRg~lEVW~~~~G~RV~a~~----------v~~~~~Ll~~  271 (307)
                              -.+.+..-+.    +.---+..+.|+..|..|++.+|-.|.+|.          |...++|+-+
T Consensus       181 ~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As  252 (406)
T KOG0295|consen  181 TFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS  252 (406)
T ss_pred             HHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe
Confidence                    0000000000    000135678899999999999999998876          4455666543

>PRK01742 tolB translocation protein TolB; Provisional

Probab=85.13  E-value=3  Score=41.34  Aligned_cols=75  Identities=15%  Similarity=0.143  Sum_probs=48.9

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      ..+..+|+|++++.+.. .+|+++|+.++....+.+++.+-.+.|-                   ++..  +++|+-.+|
T Consensus       336 ~~~~~SpDG~~ia~~~~-~~i~~~Dl~~g~~~~lt~~~~~~~~~~s-------------------PdG~--~i~~~s~~g  393 (429)
T PRK01742        336 YSAQISADGKTLVMING-DNVVKQDLTSGSTEVLSSTFLDESPSIS-------------------PNGI--MIIYSSTQG  393 (429)
T ss_pred             CCccCCCCCCEEEEEcC-CCEEEEECCCCCeEEecCCCCCCCceEC-------------------CCCC--EEEEEEcCC
Confidence            35678999998888755 5688899999988777777655433431                   1111  456665677


Q ss_pred             eEEEeec--CCCCeEEEEE
Q 021797          245 IIEVWQM--RTGPRLLTIQ  261 (307)
Q Consensus       245 ~lEVW~~--~~G~RV~a~~  261 (307)
                      ...+|.+  .+|..+..++
T Consensus       394 ~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        394 LGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             CceEEEEEECCCCceEEcc
Confidence            6666554  3576666665

>KOG1274 consensus WD40 repeat protein [General function prediction only]

Probab=85.05  E-value=6.3  Score=43.49  Aligned_cols=117  Identities=17%  Similarity=0.214  Sum_probs=78.2

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      +..++++=+|+++|..-+.=-|-|+++..+-..+..+|+- |++-=+....+                 .-||+.-+- .
T Consensus        99 ~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~-apVl~l~~~p~-----------------~~fLAvss~-d  159 (933)
T KOG1274|consen   99 IRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHD-APVLQLSYDPK-----------------GNFLAVSSC-D  159 (933)
T ss_pred             ceEEEEecCCcEEEeecCceeEEEEeccccchheeecccC-CceeeeeEcCC-----------------CCEEEEEec-C
Confidence            5678999999888886555569999999999999999984 44433332211                 226766555 9


Q ss_pred             CeEEEeecCCCCeEEEEEecCCeEEeccCcccccccC-CC-CCccc-EEEEEeCCCCceEEEecc
Q 021797          244 GIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMA-SS-PYVPL-EVFLLNGDSGQLSVLNRS  305 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~~~-~~-~~~~~-~~~ll~~~~g~l~~in~~  305 (307)
                      |.|.||++++|....+++      .+.+.-.+..++. .+ .|||. .=+++-|.++.++.+++.
T Consensus       160 G~v~iw~~~~~~~~~tl~------~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~  218 (933)
T KOG1274|consen  160 GKVQIWDLQDGILSKTLT------GVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK  218 (933)
T ss_pred             ceEEEEEcccchhhhhcc------cCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccC
Confidence            999999999776555544      2333333332211 22 28884 666777788888888764

>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]

Probab=83.58  E-value=4.9  Score=40.92  Aligned_cols=72  Identities=15%  Similarity=0.236  Sum_probs=52.8

Q ss_pred             CceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCce-eEEeecccccce--eeEEEEEecccccccccccCCCCCCcceEE
Q 021797          161 PRKGERLTLSP-SGSLAAITDSLGRILLLDTQALV-VVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       161 ~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~-ivRmWKGyRDAq--c~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .....++...| ++.++|+..+.|+|.|+|+.++. .+....|++|+-  +.|-.                   +.-..|
T Consensus       272 ~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP-------------------h~etvL  332 (422)
T KOG0264|consen  272 SAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP-------------------HNETVL  332 (422)
T ss_pred             CCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCC-------------------CCCcee
Confidence            56678899999 67888889999999999999986 567888999852  23321                   011146


Q ss_pred             EEEcCCCCeEEEeecC
Q 021797          237 AIHAPRKGIIEVWQMR  252 (307)
Q Consensus       237 VIyaprRg~lEVW~~~  252 (307)
                      +.-. -+|.|-||++-
T Consensus       333 ASSg-~D~rl~vWDls  347 (422)
T KOG0264|consen  333 ASSG-TDRRLNVWDLS  347 (422)
T ss_pred             Eecc-cCCcEEEEecc
Confidence            6555 68888888875

>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]

Probab=83.30  E-value=3.5  Score=41.53  Aligned_cols=103  Identities=17%  Similarity=0.092  Sum_probs=73.5

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEE-----EEEeccccc-------c-cc-------
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM-----EMLVNKDAA-------T-SS-------  222 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi-----~~~~~~~~~-------~-~~-------  222 (307)
                      .|..+|+.-+.++.....+..-|.++|+++|.++...=|+-||-.+-.     .+.+..|..       + +.       
T Consensus       237 tGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVL  316 (499)
T KOG0281|consen  237 TGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVL  316 (499)
T ss_pred             CCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHH
Confidence            477899999999988888999999999999999999999998866533     222222221       0 00       


Q ss_pred             --cccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          223 --AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       223 --~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                        +.......++---+++-|.-+..|+||++.++..|-+++.-+-
T Consensus       317 vGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkR  361 (499)
T KOG0281|consen  317 VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR  361 (499)
T ss_pred             hhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccc
Confidence              0111111112112778999999999999999999999987654

>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]

Probab=83.30  E-value=7.4  Score=38.31  Aligned_cols=72  Identities=22%  Similarity=0.386  Sum_probs=57.2

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE--eecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR--LWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR--mWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      +..++-+++.+.-++++|+-|++..++-..+.+-.  -||++ |++ +|+-.....+              +  =||.+.
T Consensus       123 ~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~H-e~E-~Wta~f~~~~--------------p--nlvytG  184 (339)
T KOG0280|consen  123 EALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVH-EFE-AWTAKFSDKE--------------P--NLVYTG  184 (339)
T ss_pred             eeeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccccc-cee-eeeeecccCC--------------C--ceEEec
Confidence            56778888999999999999999999988888877  89987 333 3765443322              1  388899


Q ss_pred             CCCCeEEEeecC
Q 021797          241 PRKGIIEVWQMR  252 (307)
Q Consensus       241 prRg~lEVW~~~  252 (307)
                      .-+|.|-.|++|
T Consensus       185 gDD~~l~~~D~R  196 (339)
T KOG0280|consen  185 GDDGSLSCWDIR  196 (339)
T ss_pred             CCCceEEEEEec
Confidence            999999999999

>PRK02889 tolB translocation protein TolB; Provisional

Probab=82.88  E-value=16  Score=36.13  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=27.7

Q ss_pred             eeeEEEECCCCCEEEE-EcCCC--cEEEEEcCCceeEEeecc
Q 021797          163 KGERLTLSPSGSLAAI-TDSLG--RILLLDTQALVVVRLWKG  201 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslG--RV~LiD~~~~~ivRmWKG  201 (307)
                      .......||+|+.+|. ++..|  +|+++|+.++.+.++-++
T Consensus       241 ~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~  282 (427)
T PRK02889        241 SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQS  282 (427)
T ss_pred             CccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCC
Confidence            3446788999976665 44444  689999988887777553

>KOG0289 consensus mRNA splicing factor [General function prediction only]

Probab=82.85  E-value=7.8  Score=39.89  Aligned_cols=82  Identities=13%  Similarity=0.297  Sum_probs=57.9

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      ...+.+-|+|.|...+++.|-...-|..+|..+-+---- -.+|.--..              .-.+| .|.|.-|.| +
T Consensus       306 V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~-~s~v~~ts~--------------~fHpD-gLifgtgt~-d  368 (506)
T KOG0289|consen  306 VTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDE-TSDVEYTSA--------------AFHPD-GLIFGTGTP-D  368 (506)
T ss_pred             ceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeec-cccceeEEe--------------eEcCC-ceEEeccCC-C
Confidence            456889999999999999999999999998776543110 011111110              01122 567888888 9


Q ss_pred             CeEEEeecCCCCeEEEEEe
Q 021797          244 GIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~v  262 (307)
                      |.|+||++..+.-++.|-.
T Consensus       369 ~~vkiwdlks~~~~a~Fpg  387 (506)
T KOG0289|consen  369 GVVKIWDLKSQTNVAKFPG  387 (506)
T ss_pred             ceEEEEEcCCccccccCCC
Confidence            9999999999887777654

>PRK04792 tolB translocation protein TolB; Provisional

Probab=82.73  E-value=15  Score=36.88  Aligned_cols=47  Identities=19%  Similarity=0.254  Sum_probs=32.4

Q ss_pred             eeeEEEECCCCCEEEE-EcCCC--cEEEEEcCCceeEEeeccc-ccceeeE
Q 021797          163 KGERLTLSPSGSLAAI-TDSLG--RILLLDTQALVVVRLWKGY-RDASCVF  209 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslG--RV~LiD~~~~~ivRmWKGy-RDAqc~W  209 (307)
                      .......||+|+.+|. .+..|  +|+++|+.++.+.++-.+. -+....|
T Consensus       263 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~w  313 (448)
T PRK04792        263 INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSW  313 (448)
T ss_pred             CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEE
Confidence            3346789999986655 45556  4999999999988876542 2334444

>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]

Probab=82.69  E-value=32  Score=34.82  Aligned_cols=87  Identities=21%  Similarity=0.280  Sum_probs=68.2

Q ss_pred             CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCC
Q 021797          154 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      +..|.-++-....+.++|+.+|+|+--..-+=.|+|+.+|..+-..-||.|-  +|.|-                   .+
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fs-------------------hd  117 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFS-------------------HD  117 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEc-------------------cC
Confidence            3457888889999999999999999877777899999999999999999982  22221                   11


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      .  -|+--.--.|.|.||.+.+|.-...+-
T Consensus       118 g--tlLATGdmsG~v~v~~~stg~~~~~~~  145 (399)
T KOG0296|consen  118 G--TLLATGDMSGKVLVFKVSTGGEQWKLD  145 (399)
T ss_pred             c--eEEEecCCCccEEEEEcccCceEEEee
Confidence            1  255667788999999999988776664

>PRK01742 tolB translocation protein TolB; Provisional

Probab=82.53  E-value=15  Score=36.33  Aligned_cols=39  Identities=23%  Similarity=0.309  Sum_probs=28.7

Q ss_pred             eeeEEEECCCCCEEEE-EcCCC--cEEEEEcCCceeEEeecc
Q 021797          163 KGERLTLSPSGSLAAI-TDSLG--RILLLDTQALVVVRLWKG  201 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslG--RV~LiD~~~~~ivRmWKG  201 (307)
                      +...+..+|+|++++. .+.-|  +|.++|+.++.+.++-.+
T Consensus       249 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~  290 (429)
T PRK01742        249 HNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSG  290 (429)
T ss_pred             ccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccC
Confidence            4456889999986665 45555  678889998888777654

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=82.25  E-value=20  Score=31.26  Aligned_cols=84  Identities=29%  Similarity=0.343  Sum_probs=59.8

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcC-CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDS-LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDs-lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +....-.+..++.+|++++.+.... .|.|.++|+..+..++..+|+.+    .+....-..             +.. +
T Consensus       151 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~-------------~~~-~  212 (466)
T COG2319         151 LEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD----PVSSLAFSP-------------DGG-L  212 (466)
T ss_pred             EecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC----ceEEEEEcC-------------Ccc-e
Confidence            5555556669999999987777775 99999999999999999999554    222221110             001 3


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLL  258 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~  258 (307)
                      +++-....|.|.+|+++.+..+.
T Consensus       213 ~~~~~~~d~~i~~wd~~~~~~~~  235 (466)
T COG2319         213 LIASGSSDGTIRLWDLSTGKLLR  235 (466)
T ss_pred             EEEEecCCCcEEEEECCCCcEEe
Confidence            44446788888899888777777

>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]

Probab=82.00  E-value=2.3  Score=45.93  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=55.8

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.-+.|....|.++|+|+|.+..-..--|=++|+..|.++.-+|++-. +..-++.                  +..=||
T Consensus       150 ~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~-~v~sle~------------------hp~e~L  210 (825)
T KOG0267|consen  150 YKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEG-KVQSLEF------------------HPLEVL  210 (825)
T ss_pred             ecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccc-ccccccc------------------Cchhhh
Confidence            444677788999999999999965566778888888888888876532 2222221                  111144


Q ss_pred             EEEcCCCCeEEEeecCCCCeE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV  257 (307)
                      .=-...++++.+|++.+..-|
T Consensus       211 la~Gs~d~tv~f~dletfe~I  231 (825)
T KOG0267|consen  211 LAPGSSDRTVRFWDLETFEVI  231 (825)
T ss_pred             hccCCCCceeeeeccceeEEe
Confidence            455567899999999864433

>KOG1408 consensus WD40 repeat protein [Function unknown]

Probab=81.77  E-value=2  Score=46.54  Aligned_cols=142  Identities=24%  Similarity=0.237  Sum_probs=83.6

Q ss_pred             cceeEEEecCCceeEEEeecCCCCcch-hhHHHhhhhhHHHHHHHhhhhhhccCCCCCCCCCC--CCCCcccCCCCcccc
Q 021797           82 RYFCAVTIGEDSVISAFRLSEDRSRSL-VGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEP--KPQSFARASPLTCLK  158 (307)
Q Consensus        82 ~~~~~i~vG~~P~la~y~~~~~~~~s~-~~a~~s~va~Av~s~~~s~ak~~W~~~~~~~~~e~--~p~~~~~a~pl~~l~  158 (307)
                      ...|.+||-+|-.|-++.++.+..-.. --.++|    +      .++|+..-...  ++.-.  ...-+++  .+..++
T Consensus       391 p~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils----~------~l~ki~y~d~~--~q~~~d~~~~~fdk--a~~s~~  456 (1080)
T KOG1408|consen  391 PRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILS----A------NLSKIPYEDST--QQIMHDASAGIFDK--ALVSTC  456 (1080)
T ss_pred             CccceeEecCCCcEEEeecccccccceeecccch----h------hhhcCccccCc--hhhhhhccCCcccc--cchhhc
Confidence            445788888888888887776444321 112333    1      23333331111  00000  0111222  224589


Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      |++-.+.+|++||+|+..|..|..|-+=++|++.....-           +||+.|.+--   -..+  .+++..+-|.-
T Consensus       457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~-----------~~eAHesEil---cLey--S~p~~~~kLLA  520 (1080)
T KOG1408|consen  457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTC-----------FMEAHESEIL---CLEY--SFPVLTNKLLA  520 (1080)
T ss_pred             CcccceEEEEECCCcceecccCccCceEEEEehhhhhhh-----------heecccceeE---EEee--cCchhhhHhhh
Confidence            999999999999999999999999999999999886543           4554443210   0000  11222334667


Q ss_pred             EcCCCCeEEEeecCC
Q 021797          239 HAPRKGIIEVWQMRT  253 (307)
Q Consensus       239 yaprRg~lEVW~~~~  253 (307)
                      .|.|+.+|-|+|+..
T Consensus       521 SasrdRlIHV~Dv~r  535 (1080)
T KOG1408|consen  521 SASRDRLIHVYDVKR  535 (1080)
T ss_pred             hccCCceEEEEeccc
Confidence            788888888888753

>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]

Probab=81.60  E-value=3.1  Score=40.79  Aligned_cols=39  Identities=15%  Similarity=0.180  Sum_probs=36.7

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccc
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYR  203 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyR  203 (307)
                      .+-+-+|+++++.+++..|||.++++.+|..+..|+|-+
T Consensus       236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~  274 (311)
T KOG1446|consen  236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPN  274 (311)
T ss_pred             eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCC
Confidence            677889999999999999999999999999999999973

>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]

Probab=81.56  E-value=5.1  Score=43.64  Aligned_cols=89  Identities=16%  Similarity=0.178  Sum_probs=68.4

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ++-.|+-+++.+..+-.+-.|...|..--.|-|+|+|+..-..+-=.+|+-|+=....-...                + 
T Consensus        99 ~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~----------------~-  161 (888)
T KOG0306|consen   99 ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNG----------------D-  161 (888)
T ss_pred             eeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCC----------------C-
Confidence            34447888999999999999999999989999999999999999999999996443332211                1 


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                        -++|-..+++.|.+|++.+-.+..+.
T Consensus       162 --~~lvS~sKDs~iK~WdL~tqhCf~Th  187 (888)
T KOG0306|consen  162 --SFLVSVSKDSMIKFWDLETQHCFETH  187 (888)
T ss_pred             --eEEEEeccCceEEEEecccceeeeEE
Confidence              16677778888888888776665544

>KOG3914 consensus WD repeat protein WDR4 [Function unknown]

Probab=81.37  E-value=3.9  Score=41.22  Aligned_cols=80  Identities=18%  Similarity=0.317  Sum_probs=66.3

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEee-cccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW-KGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmW-KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      ..+++|||.+.+.++|.++.|=+.....-.+|.-| =|+++    |+...+-.++                ++.+.+.-+
T Consensus       155 ~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~e----FVS~isl~~~----------------~~LlS~sGD  214 (390)
T KOG3914|consen  155 LDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKE----FVSTISLTDN----------------YLLLSGSGD  214 (390)
T ss_pred             heeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHh----heeeeeeccC----------------ceeeecCCC
Confidence            34999999999999999999999888888888755 46887    7766554321                467899999


Q ss_pred             CeEEEeecCCCCeEEEEEecC
Q 021797          244 GIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +.|.+|+.++|..+.++.+..
T Consensus       215 ~tlr~Wd~~sgk~L~t~dl~s  235 (390)
T KOG3914|consen  215 KTLRLWDITSGKLLDTCDLSS  235 (390)
T ss_pred             CcEEEEecccCCcccccchhH
Confidence            999999999999999998664

>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]

Probab=80.31  E-value=16  Score=39.52  Aligned_cols=102  Identities=17%  Similarity=0.165  Sum_probs=71.8

Q ss_pred             CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          154 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      +..|.-+.--...+++=|++.++ .++|.|-|.++|+ +|.+|+..-|++.    ++-......            ++  
T Consensus       172 l~tf~gHtD~VRgL~vl~~~~fl-ScsNDg~Ir~w~~-~ge~l~~~~ghtn----~vYsis~~~------------~~--  231 (745)
T KOG0301|consen  172 LKTFSGHTDCVRGLAVLDDSHFL-SCSNDGSIRLWDL-DGEVLLEMHGHTN----FVYSISMAL------------SD--  231 (745)
T ss_pred             hhhhccchhheeeeEEecCCCeE-eecCCceEEEEec-cCceeeeeeccce----EEEEEEecC------------CC--
Confidence            34455566677788888887654 5689999999999 6666666679998    664332111            11  


Q ss_pred             eEEEEEcCCCCeEEEeecCCCCeEEEEEecC----CeEEeccCcccccc
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK----GSKILQPTYRFGSS  278 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~----~~~Ll~~~~~~~~~  278 (307)
                       -+++-..-++.|+||...  ..+..++.+.    .++.+.++--..|+
T Consensus       232 -~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~  277 (745)
T KOG0301|consen  232 -GLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGG  277 (745)
T ss_pred             -CeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEec
Confidence             278999999999999985  8888888776    34555555555444

>smart00320 WD40 WD40 repeats

Probab=80.19  E-value=3.7  Score=23.22  Aligned_cols=33  Identities=33%  Similarity=0.434  Sum_probs=26.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLD  189 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD  189 (307)
                      +......+.+++..|+++++++....|.|.++|
T Consensus         8 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        8 LKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            444556788999999989999888888887765

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	307
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 49/292 (16%), Positives = 86/292 (29%), Gaps = 83/292 (28%)

Query: 2   PGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERL-PHQLWNVSKYGP 60
           P  L+      I+  L  W      + W      + +  +E+S   L P +   +  +  
Sbjct: 327 PRRLSII-AESIRDGLATW------DNWKHVNCDKLTTIIESSLNVLEPAEYRKM--FDR 377

Query: 61  CA----DAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV------G 110
            +     A I    P  L+ +      +  V   +  V+    +++    SLV       
Sbjct: 378 LSVFPPSAHI----PTILLSL-----IWFDVIKSDVMVV----VNKLHKYSLVEKQPKES 424

Query: 111 AI----LSKVVPATFSTISSLSKMIWRSEQSPKKSEP----KPQ------SFARASPLTC 156
            I    +   +        +L + I      PK  +      P       S         
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH-------- 476

Query: 157 LKDH---PRKGERLTLSPSGSL----------AAITDSLGRILLLDTQALVVVRLWKGYR 203
           +  H       ER+TL     L             T       +L+T  L  ++ +K Y 
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT--LQQLKFYKPYI 534

Query: 204 DASCVFMEMLVN------KDAATSSAYYAPVKSDYC--LCLAIHAPRKGIIE 247
             +    E LVN           +      + S Y   L +A+ A  + I E
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENL-----ICSKYTDLLRIALMAEDEAIFE 581

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	307
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	97.97
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	97.83
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	97.82
3ow8_A	321	WD repeat-containing protein 61; structural genomi	97.7
3ow8_A	321	WD repeat-containing protein 61; structural genomi	97.67
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	97.67
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	97.63
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	97.63
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.62
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	97.47
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	97.47
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	97.43
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	97.37
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	97.36
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	97.36
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	97.35
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	97.34
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	97.33
3jrp_A	379	Fusion protein of protein transport protein SEC13	97.32
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	97.31
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	97.3
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	97.29
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	97.28
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	97.27
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	97.27
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	97.27
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	97.24
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	97.23
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.23
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	97.21
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	97.2
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.2
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	97.18
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	97.18
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.18
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	97.17
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	97.16
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	97.16
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.16
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.15
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	97.14
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	97.12
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	97.11
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	97.11
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	97.09
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.09
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	97.07
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	97.05
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	97.04
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	97.04
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	97.04
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	97.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	97.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	96.97
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	96.95
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.93
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	96.93
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	96.87
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	96.85
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	96.82
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	96.8
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	96.79
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	96.78
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	96.78
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	96.77
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	96.75
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	96.74
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	96.74
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	96.72
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	96.72
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	96.71
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	96.7
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	96.63
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	96.62
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.62
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	96.57
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	96.57
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	96.56
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	96.56
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	96.55
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	96.54
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	96.54
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	96.54
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	96.51
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	96.49
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	96.47
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	96.46
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	96.44
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	96.41
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	96.41
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	96.37
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	96.36
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	96.36
2pm7_B	297	Protein transport protein SEC13, protein transport	96.36
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	96.35
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	96.32
3jrp_A	379	Fusion protein of protein transport protein SEC13	96.32
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	96.31
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	96.31
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	96.28
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	96.28
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	96.26
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	96.26
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	96.18
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.14
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	96.13
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	96.13
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	96.11
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	96.1
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	96.08
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	96.05
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	96.04
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	96.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	95.86
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	95.85
3jro_A	753	Fusion protein of protein transport protein SEC13	95.84
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	95.81
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	95.75
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	95.65
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	95.65
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	95.64
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	95.6
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	95.58
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	95.5
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	95.45
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	95.44
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	95.42
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	95.38
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	95.37
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	95.31
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	95.0
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	94.88
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	94.85
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	94.84
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	94.69
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	94.66
2pm7_B	297	Protein transport protein SEC13, protein transport	94.64
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	94.61
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	94.59
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	94.55
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	94.21
3jro_A	753	Fusion protein of protein transport protein SEC13	94.18
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	94.1
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	93.99
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	93.99
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	93.95
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	93.87
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	93.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	93.57
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	93.53
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	93.37
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	93.37
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	93.26
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	93.24
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	93.17
1k32_A	1045	Tricorn protease; protein degradation, substrate g	93.0
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	92.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	92.76
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	92.73
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	92.48
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	92.35
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	92.34
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	92.33
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	92.33
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	92.25
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	92.23
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	92.05
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	91.94
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	91.76
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	91.67
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	91.6
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	91.39
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	91.31
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	91.14
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	90.95
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	90.81
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	90.1
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	90.09
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	89.82
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	89.7
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	89.47
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	89.08
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	88.6
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	88.37
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	88.3
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	88.28
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	88.24
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	88.2
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	88.09
2ece_A	462	462AA long hypothetical selenium-binding protein;	87.2
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	86.68
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	86.55
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	86.29
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	86.0
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	85.47
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	85.26
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	84.87
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	84.71
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	84.63
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	84.5
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	84.4
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	84.37
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	84.21
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	82.9
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	82.46
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	81.96
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	81.6
1k32_A	1045	Tricorn protease; protein degradation, substrate g	81.42
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	81.33
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	80.82

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=97.97  E-value=0.0002  Score=62.57  Aligned_cols=90  Identities=11%  Similarity=0.066  Sum_probs=71.8

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|..+...+.+|+.+|+++++++++..|.|.++|+.++..++.++|+.+.    |....-.             ++..  
T Consensus        27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~-------------~~~~--   87 (369)
T 3zwl_B           27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGT----IWSIDVD-------------CFTK--   87 (369)
T ss_dssp             EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSC----EEEEEEC-------------TTSS--
T ss_pred             EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCc----EEEEEEc-------------CCCC--
Confidence            38889999999999999999999999999999999999999999998873    3221110             0111  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +++.+-.+|.|.||+++++..+..+....
T Consensus        88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  116 (369)
T 3zwl_B           88 YCVTGSADYSIKLWDVSNGQCVATWKSPV  116 (369)
T ss_dssp             EEEEEETTTEEEEEETTTCCEEEEEECSS
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEeecCC
Confidence            33566779999999999999998887433

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=97.83  E-value=0.00028  Score=62.51  Aligned_cols=89  Identities=15%  Similarity=0.146  Sum_probs=69.2

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|......+.+|+.+|+++++|++...|.|.|+|+.++..++.++++...    +....-.             ++..  
T Consensus         8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~-------------~~~~--   68 (304)
T 2ynn_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP----VRAGKFI-------------ARKN--   68 (304)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEE-------------GGGT--
T ss_pred             eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc----EEEEEEe-------------CCCC--
Confidence            46677778999999999999999999999999999999999999988763    2211100             0011  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      +++-+-.+|.|.||++++|..+..+..-
T Consensus        69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h   96 (304)
T 2ynn_A           69 WIIVGSDDFRIRVFNYNTGEKVVDFEAH   96 (304)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             EEEEECCCCEEEEEECCCCcEEEEEeCC
Confidence            4466778999999999999988877643

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=97.82  E-value=0.00035  Score=61.19  Aligned_cols=90  Identities=17%  Similarity=0.201  Sum_probs=70.8

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      ..|..+...+.+++.+|+++++|++...|.|.|+|+.++..++..+|+... +.-+....                +.. 
T Consensus        17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~-v~~~~~~~----------------~~~-   78 (312)
T 4ery_A           17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSS----------------DSN-   78 (312)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECT----------------TSS-
T ss_pred             EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCc-eEEEEEcC----------------CCC-
Confidence            447778889999999999999999999999999999999999999998763 11111110                111 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                       +++.+-.+|.|.||+++++..+..+...
T Consensus        79 -~l~s~~~d~~i~vwd~~~~~~~~~~~~~  106 (312)
T 4ery_A           79 -LLVSASDDKTLKIWDVSSGKCLKTLKGH  106 (312)
T ss_dssp             -EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             -EEEEECCCCEEEEEECCCCcEEEEEcCC
Confidence             4466778999999999999988877643

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=97.70  E-value=0.00037  Score=62.81  Aligned_cols=86  Identities=20%  Similarity=0.232  Sum_probs=67.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+++.+|+++++++....|.|.|+|+.++..++.++|+.+    ++....-.             ++..  +
T Consensus       202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----~v~~~~~s-------------p~~~--~  262 (321)
T 3ow8_A          202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS----WVLNVAFC-------------PDDT--H  262 (321)
T ss_dssp             ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS----CEEEEEEC-------------TTSS--E
T ss_pred             EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC----ceEEEEEC-------------CCCC--E
Confidence            445556688999999999999999999999999999999999999987    44332211             0111  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+..+|.|.||+++++..+..+.
T Consensus       263 l~s~s~D~~v~iwd~~~~~~~~~~~  287 (321)
T 3ow8_A          263 FVSSSSDKSVKVWDVGTRTCVHTFF  287 (321)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEeCCCcEEEEeCCCCEEEEEEc
Confidence            4567789999999999998888765

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=97.67  E-value=0.00059  Score=61.48  Aligned_cols=84  Identities=20%  Similarity=0.218  Sum_probs=65.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +......+.+++.+|+|+++|+....|.|.|+|+.++..++.++|+...  .+.|-    +               +.. 
T Consensus       160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s----p---------------d~~-  219 (321)
T 3ow8_A          160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS----P---------------DSQ-  219 (321)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC----T---------------TSC-
T ss_pred             ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc----C---------------CCC-
Confidence            4445566889999999999999999999999999999999999998763  11221    0               111 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       +++.+-.+|.|.||+++++..+..+.
T Consensus       220 -~l~s~s~dg~i~iwd~~~~~~~~~~~  245 (321)
T 3ow8_A          220 -LLVTASDDGYIKIYDVQHANLAGTLS  245 (321)
T ss_dssp             -EEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred             -EEEEEcCCCeEEEEECCCcceeEEEc
Confidence             45678889999999999988876654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=97.67  E-value=0.00028  Score=64.99  Aligned_cols=87  Identities=14%  Similarity=0.122  Sum_probs=67.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +..+...+.+|+.+|+|+++|+....|.|.|+|+.++..++.++|+.+    .|....-..            ....  +
T Consensus       123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~----~V~~~~~~~------------~~~~--~  184 (344)
T 4gqb_B          123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA----QVTCVAASP------------HKDS--V  184 (344)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEECS------------SCTT--E
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC----ceEEEEecC------------CCCC--c
Confidence            445677899999999999999999999999999999999999999987    343222110            0111  4


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+..+|.|.||+++++..+..+.
T Consensus       185 l~s~s~D~~v~iwd~~~~~~~~~~~  209 (344)
T 4gqb_B          185 FLSCSEDNRILLWDTRCPKPASQIG  209 (344)
T ss_dssp             EEEEETTSCEEEEETTSSSCEEECC
T ss_pred             eeeeccccccccccccccceeeeee
Confidence            4567789999999999998777654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=97.63  E-value=0.00068  Score=59.36  Aligned_cols=85  Identities=13%  Similarity=0.233  Sum_probs=65.2

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceee-EEEEEecccccccccccCCCCCCcceEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV-FMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~-Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      .......++.+|++++++++...|.|.++|+.++..++.++|+.+.... +......               +.  .+++
T Consensus       191 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~l~  253 (312)
T 4ery_A          191 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT---------------GG--KWIV  253 (312)
T ss_dssp             SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS---------------SS--CEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC---------------CC--cEEE
Confidence            3445778999999999999999999999999999999999998875322 2211111               01  1456


Q ss_pred             EcCCCCeEEEeecCCCCeEEEEE
Q 021797          239 HAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      -+..+|.|.||+++++..+..+.
T Consensus       254 sg~~dg~i~vwd~~~~~~~~~~~  276 (312)
T 4ery_A          254 SGSEDNLVYIWNLQTKEIVQKLQ  276 (312)
T ss_dssp             ECCTTSCEEEEETTTCCEEEEEC
T ss_pred             EECCCCEEEEEECCCchhhhhhh
Confidence            78889999999999998877664

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=97.63  E-value=0.0017  Score=55.92  Aligned_cols=88  Identities=19%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+..++.+|+++++++.+..|.|.++|+.++..++.++++.+    .+....-.             ++..  +
T Consensus       137 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~----~i~~~~~~-------------~~~~--~  197 (337)
T 1gxr_A          137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD----GASCIDIS-------------NDGT--K  197 (337)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEEC-------------TTSS--E
T ss_pred             cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC----ceEEEEEC-------------CCCC--E
Confidence            556667789999999999999999999999999999999999998766    22221110             0111  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      ++.+-.+|.|.+|+++++..+..+...
T Consensus       198 l~~~~~dg~i~~~d~~~~~~~~~~~~~  224 (337)
T 1gxr_A          198 LWTGGLDNTVRSWDLREGRQLQQHDFT  224 (337)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred             EEEEecCCcEEEEECCCCceEeeecCC
Confidence            345567999999999998887766543

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.62  E-value=0.00079  Score=60.87  Aligned_cols=87  Identities=17%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+++.+|++++++++...|.|.++|+.++..++.++|+.+.    |....-.             ++..  +
T Consensus       135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~-------------~~~~--~  195 (420)
T 3vl1_A          135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT----VTDIAII-------------DRGR--N  195 (420)
T ss_dssp             TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC----EEEEEEE-------------TTTT--E
T ss_pred             cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc----EEEEEEc-------------CCCC--E
Confidence            4566778999999999999999999999999999999999999998873    3221110             0111  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++.+-.+|.|.||+++++..+..+..
T Consensus       196 l~s~~~d~~v~iwd~~~~~~~~~~~~  221 (420)
T 3vl1_A          196 VLSASLDGTIRLWECGTGTTIHTFNR  221 (420)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECB
T ss_pred             EEEEcCCCcEEEeECCCCceeEEeec
Confidence            35777899999999999999998875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=97.47  E-value=0.0013  Score=60.51  Aligned_cols=86  Identities=17%  Similarity=0.211  Sum_probs=65.8

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....+.+++.+|+|+++|+....|.|.|+|+.++..++.++|+.+.    |....-.             ++..  +++.
T Consensus       122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~-------------p~~~--~l~s  182 (393)
T 1erj_A          122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD----IYSLDYF-------------PSGD--KLVS  182 (393)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEEC-------------TTSS--EEEE
T ss_pred             CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCC----EEEEEEc-------------CCCC--EEEE
Confidence            3445789999999999999999999999999999999999999873    3221110             0111  3467


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecC
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +-.+|.|.||++++|..+..+....
T Consensus       183 ~s~d~~v~iwd~~~~~~~~~~~~~~  207 (393)
T 1erj_A          183 GSGDRTVRIWDLRTGQCSLTLSIED  207 (393)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECSS
T ss_pred             ecCCCcEEEEECCCCeeEEEEEcCC
Confidence            7889999999999998877766443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=97.47  E-value=0.0021  Score=54.88  Aligned_cols=82  Identities=10%  Similarity=0.072  Sum_probs=61.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc----eeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL----VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~----~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +..++..+.+|+.+|+++++|++...|.|.|+|+.++    ..++.++|+.+.    |....-.          +. .+.
T Consensus         7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~----v~~~~~~----------~~-~d~   71 (351)
T 3f3f_A            7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS----IVAIDWA----------SP-EYG   71 (351)
T ss_dssp             ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC----EEEEEEC----------CG-GGC
T ss_pred             CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc----EEEEEEc----------CC-CCC
Confidence            5667888999999999999999999999999999987    688888888773    2211110          00 001


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                      .  +++-+-.+|.|.||+++++.
T Consensus        72 ~--~l~s~~~dg~v~vwd~~~~~   92 (351)
T 3f3f_A           72 R--IIASASYDKTVKLWEEDPDQ   92 (351)
T ss_dssp             S--EEEEEETTSCEEEEEECTTS
T ss_pred             C--EEEEEcCCCeEEEEecCCCc
Confidence            1  44566779999999999873

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=97.43  E-value=0.0014  Score=60.47  Aligned_cols=87  Identities=14%  Similarity=0.143  Sum_probs=68.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+++.+|+++++++....|.|.++|+.++..++.++|+.+    .+....-.              +.   +
T Consensus       306 ~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~--------------~~---~  364 (464)
T 3v7d_B          306 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA----LVGLLRLS--------------DK---F  364 (464)
T ss_dssp             ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEEC--------------SS---E
T ss_pred             ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCC----cEEEEEEc--------------CC---E
Confidence            555667788999999999999999999999999999999999999877    33222111              01   4


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ++-+-.+|.|.||+++++.+...++...
T Consensus       365 l~s~s~dg~v~vwd~~~~~~~~~~~~~~  392 (464)
T 3v7d_B          365 LVSAAADGSIRGWDANDYSRKFSYHHTN  392 (464)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECTT
T ss_pred             EEEEeCCCcEEEEECCCCceeeeecCCC
Confidence            4666779999999999999888876443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=97.37  E-value=0.0033  Score=56.52  Aligned_cols=87  Identities=13%  Similarity=0.139  Sum_probs=67.0

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+..+...+.+++.+|+++++++....|.|.|+|+.++..++.++|+.+    .|....-.             ++..  
T Consensus       179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~----~v~~v~~~-------------p~~~--  239 (340)
T 1got_B          179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES----DINAICFF-------------PNGN--  239 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS----CEEEEEEC-------------TTSS--
T ss_pred             EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC----CEEEEEEc-------------CCCC--
Confidence            3555667789999999999999999999999999999999999999887    23222110             0111  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +++-+..+|.|.||+++++..+..+.
T Consensus       240 ~l~s~s~d~~v~iwd~~~~~~~~~~~  265 (340)
T 1got_B          240 AFATGSDDATCRLFDLRADQELMTYS  265 (340)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEEEc
Confidence            34567789999999999988776654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=97.36  E-value=0.002  Score=57.33  Aligned_cols=86  Identities=12%  Similarity=0.129  Sum_probs=63.5

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....+.+++.+|++++++++...|.|.|+| .++..++.++++.+.    +....-.             ++..  +++.
T Consensus       107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~----v~~~~~~-------------~~~~--~l~~  166 (425)
T 1r5m_A          107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAP----IVSVKWN-------------KDGT--HIIS  166 (425)
T ss_dssp             -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSC----EEEEEEC-------------TTSS--EEEE
T ss_pred             CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCcc----EEEEEEC-------------CCCC--EEEE
Confidence            355788999999999999999999999999 788888999887762    2221110             0111  3346


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      +-.+|.|.+|+++++..+..+.....
T Consensus       167 ~~~d~~i~iwd~~~~~~~~~~~~~~~  192 (425)
T 1r5m_A          167 MDVENVTILWNVISGTVMQHFELKET  192 (425)
T ss_dssp             EETTCCEEEEETTTTEEEEEECCC--
T ss_pred             EecCCeEEEEECCCCcEEEEeecccc
Confidence            67799999999999999888876544

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=97.36  E-value=0.0012  Score=61.32  Aligned_cols=88  Identities=16%  Similarity=0.288  Sum_probs=70.5

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      ..+..+...+.+++.+|++++++++...|.|.++|+.++..++.++|+++    |+.......             +.. 
T Consensus       186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~-------------~g~-  247 (410)
T 1vyh_C          186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE----WVRMVRPNQ-------------DGT-  247 (410)
T ss_dssp             ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEECT-------------TSS-
T ss_pred             EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc----cEEEEEECC-------------CCC-
Confidence            33556677899999999999999999999999999999999999999988    665443211             111 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       +++-+..+|.|.||+++++..+..+.
T Consensus       248 -~l~s~s~D~~v~vwd~~~~~~~~~~~  273 (410)
T 1vyh_C          248 -LIASCSNDQTVRVWVVATKECKAELR  273 (410)
T ss_dssp             -EEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             -EEEEEcCCCeEEEEECCCCceeeEec
Confidence             45667789999999999998877664

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=97.35  E-value=0.0021  Score=63.57  Aligned_cols=89  Identities=13%  Similarity=0.169  Sum_probs=67.9

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|......+.+|+.+|+|+++|++...|.|.|+|+.++..++.++|+... +.-+....+                ..  
T Consensus         8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~----------------~~--   68 (814)
T 3mkq_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP-VRAGKFIAR----------------KN--   68 (814)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEEEGG----------------GT--
T ss_pred             eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc-EEEEEEeCC----------------CC--
Confidence            35666778999999999999999999999999999999999999988763 111111111                11  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      +++.+..+|.|.||++++|..+..+...
T Consensus        69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~   96 (814)
T 3mkq_A           69 WIIVGSDDFRIRVFNYNTGEKVVDFEAH   96 (814)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence            2344566999999999999998887643

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=97.34  E-value=0.0012  Score=60.69  Aligned_cols=78  Identities=10%  Similarity=0.133  Sum_probs=60.0

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEe-ecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRm-WKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +......+.+++.||+|+++|+....|.|.|+|+.++..++. .+|+.+    +|....=.             ++..  
T Consensus       265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~----~V~~v~fS-------------pdg~--  325 (365)
T 4h5i_A          265 VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF----AITEVTIS-------------PDST--  325 (365)
T ss_dssp             EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS----CEEEEEEC-------------TTSC--
T ss_pred             ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC----CEEEEEEC-------------CCCC--
Confidence            445556688999999999999999999999999999999985 589988    44332211             1111  


Q ss_pred             EEEEcCCCCeEEEeecCC
Q 021797          236 LAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~  253 (307)
                      +++-+..+|.|.||+++.
T Consensus       326 ~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          326 YVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEEEEETTSEEEEEECCT
T ss_pred             EEEEEeCCCeEEEEEcCC
Confidence            456788999999999964

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=97.33  E-value=0.0013  Score=61.08  Aligned_cols=88  Identities=23%  Similarity=0.279  Sum_probs=68.8

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|..+...+..|+.+|+++++|++...|.|.|+|+.++..++.++|+.+.    |....-.             ++..  
T Consensus       145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~-------------p~~~--  205 (410)
T 1vyh_C          145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN----VSSVSIM-------------PNGD--  205 (410)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC----EEEEEEC-------------SSSS--
T ss_pred             EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCC----EEEEEEe-------------CCCC--
Confidence            36666778899999999999999999999999999999999999998763    2211110             0111  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      +++-+..+|.|.||++++|..+..+..
T Consensus       206 ~l~s~s~D~~i~~wd~~~~~~~~~~~~  232 (410)
T 1vyh_C          206 HIVSASRDKTIKMWEVQTGYCVKTFTG  232 (410)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEeC
Confidence            346778899999999999998877763

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=97.32  E-value=0.0021  Score=56.40  Aligned_cols=84  Identities=13%  Similarity=0.102  Sum_probs=62.9

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcC--CceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ--ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~--~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ..+..+...+.+|+.+|+++++|++...|.|.|+|+.  ++..++.++|+.+.    |....-..          .+ +.
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~~----------~~-~~   69 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAH----------PK-FG   69 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECC----------GG-GC
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCc----EEEEEeCC----------CC-CC
Confidence            3466778889999999999999999999999999998  88899999998763    22111100          00 01


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                      .  +++-+-.+|.|.||+++++.
T Consensus        70 ~--~l~s~~~dg~v~iwd~~~~~   90 (379)
T 3jrp_A           70 T--ILASCSYDGKVLIWKEENGR   90 (379)
T ss_dssp             S--EEEEEETTSCEEEEEEETTE
T ss_pred             C--EEEEeccCCEEEEEEcCCCc
Confidence            1  44566779999999999886

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=97.31  E-value=0.0017  Score=59.18  Aligned_cols=81  Identities=12%  Similarity=0.117  Sum_probs=61.0

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEee-cccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW-KGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmW-KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      ......+.+++.+|++++++++...|.|.++|+.++..++.+ +++.+..+.-+....+                ..  +
T Consensus       173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~  234 (402)
T 2aq5_A          173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE----------------GK--I  234 (402)
T ss_dssp             TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST----------------TE--E
T ss_pred             CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC----------------Cc--E
Confidence            456778899999999999999999999999999999999998 7887653322222111                11  2


Q ss_pred             EEEc---CCCCeEEEeecCCCCe
Q 021797          237 AIHA---PRKGIIEVWQMRTGPR  256 (307)
Q Consensus       237 VIya---prRg~lEVW~~~~G~R  256 (307)
                      ++.+   ...|.|.||+++++..
T Consensus       235 l~~g~~~~~d~~i~iwd~~~~~~  257 (402)
T 2aq5_A          235 LTTGFSRMSERQVALWDTKHLEE  257 (402)
T ss_dssp             EEEEECTTCCEEEEEEETTBCSS
T ss_pred             EEEeccCCCCceEEEEcCccccC
Confidence            2333   5789999999998765

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=97.30  E-value=0.0029  Score=56.22  Aligned_cols=87  Identities=13%  Similarity=0.094  Sum_probs=67.3

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+......+..++.+|++++++++...|.|.++|+.++..++.++++..    .+....-.             ++.   
T Consensus       242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~-------------~~~---  301 (425)
T 1r5m_A          242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ----SIVSASWV-------------GDD---  301 (425)
T ss_dssp             EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS----CEEEEEEE-------------TTT---
T ss_pred             eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc----cEEEEEEC-------------CCC---
Confidence            3555667789999999999999999999999999999999999988765    22211110             112   


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      +++.+..+|.|.||+++++..+..+..
T Consensus       302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~  328 (425)
T 1r5m_A          302 KVISCSMDGSVRLWSLKQNTLLALSIV  328 (425)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             EEEEEeCCCcEEEEECCCCcEeEeccc
Confidence            445667799999999999998887774

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=97.29  E-value=0.0021  Score=60.66  Aligned_cols=128  Identities=16%  Similarity=0.139  Sum_probs=78.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+++.+|+|+++|+.+..|.|.++|+.++..++..+|.-...+.-+.........   .+   ...+..  +
T Consensus       484 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~---~~---~~~~~~--~  555 (615)
T 1pgu_A          484 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA---NE---EEIEED--L  555 (615)
T ss_dssp             SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------------CCSCC--E
T ss_pred             cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccc---cc---cccCCC--E
Confidence            445567789999999999999999999999999999999999988333333333322100000   00   000111  4


Q ss_pred             EEEcCCCCeEEEeecCCC-CeEEEEEecCCeEEeccCcccccccCCCCCcc-cEEEEEeCCCCceEEEecc
Q 021797          237 AIHAPRKGIIEVWQMRTG-PRLLTIQCAKGSKILQPTYRFGSSMASSPYVP-LEVFLLNGDSGQLSVLNRS  305 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G-~RV~a~~v~~~~~Ll~~~~~~~~~~~~~~~~~-~~~~ll~~~~g~l~~in~~  305 (307)
                      ++-+-.+|.|.||++.++ ..+..+..-.        ..+.+    -.+.+ .+ ++--..||.|+..+..
T Consensus       556 l~~~~~dg~i~iw~~~~~~~~~~~~~~h~--------~~v~~----l~~s~~~~-l~s~~~d~~v~iw~~~  613 (615)
T 1pgu_A          556 VATGSLDTNIFIYSVKRPMKIIKALNAHK--------DGVNN----LLWETPST-LVSSGADACIKRWNVV  613 (615)
T ss_dssp             EEEEETTSCEEEEESSCTTCCEEETTSST--------TCEEE----EEEEETTE-EEEEETTSCEEEEEEC
T ss_pred             EEEEcCCCcEEEEECCCCceechhhhcCc--------cceEE----EEEcCCCC-eEEecCCceEEEEeee
Confidence            456778999999999998 4443322100        00111    12444 23 5555567888877654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=97.28  E-value=0.0045  Score=54.71  Aligned_cols=92  Identities=12%  Similarity=0.059  Sum_probs=65.7

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +..+...+.+++.+| +++++|+....|.|.|+|+.++.......+..+..+.++......              +.  -
T Consensus       136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------~~--~  199 (304)
T 2ynn_A          136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP--------------DK--P  199 (304)
T ss_dssp             ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCST--------------TC--C
T ss_pred             hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcC--------------CC--C
Confidence            555667789999999 678999999999999999988766555544433334444332111              11  1


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +++-+..+|.|.||+++++..+..+..-.
T Consensus       200 ~l~s~s~D~~i~iWd~~~~~~~~~~~~h~  228 (304)
T 2ynn_A          200 YMITASDDLTIKIWDYQTKSCVATLEGHM  228 (304)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             EEEEEcCCCeEEEEeCCCCccceeeCCCC
Confidence            45677889999999999999988887443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=97.27  E-value=0.0019  Score=57.81  Aligned_cols=84  Identities=11%  Similarity=0.009  Sum_probs=62.3

Q ss_pred             CceeeEEEECC--CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          161 PRKGERLTLSP--SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       161 ~R~~~~I~lsP--~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      ...+..++.+|  ++++++++...|.|.|+|+.++..+++.++..+..+.-+....                +..  +++
T Consensus       125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p----------------dg~--~la  186 (343)
T 3lrv_A          125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK----------------DSL--LLA  186 (343)
T ss_dssp             SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT----------------TSC--EEE
T ss_pred             CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC----------------CCC--EEE
Confidence            45689999999  9999999999999999999999998888666554433232211                111  445


Q ss_pred             EcCCCCeEEEeecCCCCeE-EEEEe
Q 021797          239 HAPRKGIIEVWQMRTGPRL-LTIQC  262 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV-~a~~v  262 (307)
                      -+-.+|.|.||+++++..+ ..+..
T Consensus       187 sg~~dg~i~iwd~~~~~~~~~~~~~  211 (343)
T 3lrv_A          187 LYSPDGILDVYNLSSPDQASSRFPV  211 (343)
T ss_dssp             EECTTSCEEEEESSCTTSCCEECCC
T ss_pred             EEcCCCEEEEEECCCCCCCccEEec
Confidence            5678999999999998877 55654

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=97.27  E-value=0.0021  Score=57.38  Aligned_cols=88  Identities=20%  Similarity=0.298  Sum_probs=67.1

Q ss_pred             CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          153 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ++..|..+...+..++.+|+|++++++...|.|.|+|+.++..++.++|+.+.    |....-.             ++.
T Consensus        57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~-------------~~~  119 (319)
T 3frx_A           57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD----VMSVDID-------------KKA  119 (319)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEC-------------TTS
T ss_pred             cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc----EEEEEEc-------------CCC
Confidence            34457777888999999999999999999999999999999999999999873    2221110             011


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                        -+++-+-.+|.|.||+++ +.++..+
T Consensus       120 --~~l~s~s~D~~i~vwd~~-~~~~~~~  144 (319)
T 3frx_A          120 --SMIISGSRDKTIKVWTIK-GQCLATL  144 (319)
T ss_dssp             --CEEEEEETTSCEEEEETT-SCEEEEE
T ss_pred             --CEEEEEeCCCeEEEEECC-CCeEEEE
Confidence              155778899999999996 5555444

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=97.27  E-value=0.0014  Score=61.94  Aligned_cols=84  Identities=17%  Similarity=0.218  Sum_probs=62.5

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      |.=+...+.+|++||+|+++|+....|.|.|+|. ++..++.++|+++    .|....-.             ++.. +|
T Consensus        12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~----~V~~l~fs-------------pdg~-~l   72 (577)
T 2ymu_A           12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS----SVWGVAFS-------------PDGQ-TI   72 (577)
T ss_dssp             ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS----CEEEEEEC-------------TTSS-EE
T ss_pred             ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCC----CEEEEEEC-------------CCCC-EE
Confidence            5556778999999999999999988999999995 7889999999987    34332211             0111 23


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       +-+..+|.|.||++ +|+.+..++
T Consensus        73 -as~~~d~~i~vWd~-~~~~~~~~~   95 (577)
T 2ymu_A           73 -ASASDDKTVKLWNR-NGQLLQTLT   95 (577)
T ss_dssp             -EEEETTSCEEEEET-TSCEEEEEC
T ss_pred             -EEEeCCCEEEEEEC-CCCEEEEEE
Confidence             44667999999996 577766655

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=97.24  E-value=0.0037  Score=54.95  Aligned_cols=85  Identities=6%  Similarity=-0.071  Sum_probs=64.2

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEc------------------CCceeEEeecccccceeeEEEEEeccccccc
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDT------------------QALVVVRLWKGYRDASCVFMEMLVNKDAATS  221 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~------------------~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~  221 (307)
                      ....+.+|+.+|++++++++...|.|.++|+                  ..+..++.++++.+    ++....-.     
T Consensus       141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~-----  211 (372)
T 1k8k_C          141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG----WVHGVCFS-----  211 (372)
T ss_dssp             CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS----CEEEEEEC-----
T ss_pred             cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC----eEEEEEEC-----
Confidence            3567899999999999999999999999995                  47889999987765    33222110     


Q ss_pred             ccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       222 ~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                              ++..  +++.+-.+|.|.||+++++..+..+...
T Consensus       212 --------~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~  243 (372)
T 1k8k_C          212 --------ANGS--RVAWVSHDSTVCLADADKKMAVATLASE  243 (372)
T ss_dssp             --------SSSS--EEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred             --------CCCC--EEEEEeCCCEEEEEECCCCceeEEEccC
Confidence                    0111  3455678999999999999998888744

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=97.23  E-value=0.0021  Score=58.60  Aligned_cols=83  Identities=20%  Similarity=0.211  Sum_probs=63.6

Q ss_pred             CccccCCCceeeEEEECCCCCEEEEEcCCCc-EEEEEcCCceeEEeec-c-cccceeeEEEEEecccccccccccCCCCC
Q 021797          154 LTCLKDHPRKGERLTLSPSGSLAAITDSLGR-ILLLDTQALVVVRLWK-G-YRDASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~lAavtDslGR-V~LiD~~~~~ivRmWK-G-yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      +..+..+...+.+|+.+|+|+++|++...|. |.|+|+.++..++.++ | +.+ .+.-+....                
T Consensus       188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~s~----------------  250 (355)
T 3vu4_A          188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKWST----------------  250 (355)
T ss_dssp             CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEECT----------------
T ss_pred             cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEECC----------------
Confidence            4557778888999999999999999999998 9999999999999998 7 554 232222211                


Q ss_pred             CcceEEEEEcCCCCeEEEeecCCCC
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                      +..  +++-+..+|.|.||+++++.
T Consensus       251 ~~~--~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          251 DGS--KLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             TSC--EEEEEETTCEEEEEESSCCS
T ss_pred             CCC--EEEEEECCCEEEEEEccCCC
Confidence            111  34556779999999998763

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.23  E-value=0.012  Score=53.01  Aligned_cols=106  Identities=13%  Similarity=0.125  Sum_probs=69.8

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccce--eeEEEEEeccccc-----ccccccCC
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS--CVFMEMLVNKDAA-----TSSAYYAP  227 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAq--c~Wi~~~~~~~~~-----~~~~~~~~  227 (307)
                      ..+......+.+++.+|++++++++...|.|.++|+.++..++.+++..+..  +.-+......+..     ......-.
T Consensus       175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~  254 (420)
T 3vl1_A          175 RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE  254 (420)
T ss_dssp             EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred             eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence            3356667789999999999999999999999999999999999999754321  1122211111100     00000000


Q ss_pred             CCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          228 VKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       228 ~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      -.++.  -+++.+-.+|.|.||+++++..+..+..
T Consensus       255 ~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~  287 (420)
T 3vl1_A          255 FGTYG--KYVIAGHVSGVITVHNVFSKEQTIQLPS  287 (420)
T ss_dssp             SSCTT--EEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             EcCCC--CEEEEEcCCCeEEEEECCCCceeEEccc
Confidence            00122  2446677899999999999998877754

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=97.21  E-value=0.0049  Score=53.45  Aligned_cols=84  Identities=19%  Similarity=0.211  Sum_probs=63.0

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+|+.+|+++++++....|.|.|+|+.++..++..++.....+...    .              ++.. ++
T Consensus       211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~----~--------------~~~~-~~  271 (340)
T 4aow_A          211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF----S--------------PNRY-WL  271 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEE----C--------------SSSS-EE
T ss_pred             ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeec----C--------------CCCc-ee
Confidence            455566788999999999999999999999999999999999987654222111    0              0111 32


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                        -+...|.|.||+++.+..+..+.
T Consensus       272 --~~~~d~~i~iwd~~~~~~~~~~~  294 (340)
T 4aow_A          272 --CAATGPSIKIWDLEGKIIVDELK  294 (340)
T ss_dssp             --EEEETTEEEEEETTTTEEEEEEC
T ss_pred             --eccCCCEEEEEECCCCeEEEecc
Confidence              34468999999999888877765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=97.20  E-value=0.0051  Score=56.29  Aligned_cols=91  Identities=16%  Similarity=0.163  Sum_probs=67.8

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+......+..++.+|++++++++...|.|.++|+.++..++.++++.++    +....-.          +. . ..  
T Consensus       212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~----------p~-~-~~--  273 (401)
T 4aez_A          212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA----VKAVAWC----------PW-Q-SN--  273 (401)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC----CCEEEEC----------TT-S-TT--
T ss_pred             EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce----EEEEEEC----------CC-C-CC--
Confidence            35666778999999999999999999999999999999999998887663    2211110          00 0 11  


Q ss_pred             EEEEc--CCCCeEEEeecCCCCeEEEEEecC
Q 021797          236 LAIHA--PRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       236 LVIya--prRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      |++-+  -.+|.|.+|++++|..+..+..+.
T Consensus       274 ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~  304 (401)
T 4aez_A          274 LLATGGGTMDKQIHFWNAATGARVNTVDAGS  304 (401)
T ss_dssp             EEEEECCTTTCEEEEEETTTCCEEEEEECSS
T ss_pred             EEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            33333  379999999999999988887543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.20  E-value=0.012  Score=52.55  Aligned_cols=84  Identities=15%  Similarity=0.185  Sum_probs=61.2

Q ss_pred             eeeEEEECCCCCEEEEEc-CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSPSGSLAAITD-SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtD-slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....++.+|+|++++++. ..|.|.++|+.++..++..++.....  -+..  ..+             ..  +|++-..
T Consensus        75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~~~--s~d-------------g~--~l~~~~~  135 (391)
T 1l0q_A           75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL--GLAL--SPD-------------GK--KLYVTNN  135 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE--EEEE--CTT-------------SS--EEEEEET
T ss_pred             CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcc--eEEE--CCC-------------CC--EEEEEeC
Confidence            678999999998776655 55999999999999999888755421  1111  111             11  3545567


Q ss_pred             CCCeEEEeecCCCCeEEEEEecCC
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      ..|.|.+|++++|..+..+..+.+
T Consensus       136 ~~~~v~~~d~~~~~~~~~~~~~~~  159 (391)
T 1l0q_A          136 GDKTVSVINTVTKAVINTVSVGRS  159 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCSS
T ss_pred             CCCEEEEEECCCCcEEEEEecCCC
Confidence            789999999999988888776544

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.0014  Score=59.98  Aligned_cols=89  Identities=12%  Similarity=0.232  Sum_probs=67.5

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeec-ccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK-GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      ....+.+++.+|++++++++...|.|.++|+.++..++.|+ +... .+.-+.....-            .++.  .+++
T Consensus       213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~------------s~~~--~~l~  277 (437)
T 3gre_A          213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA-PITHVEVCQFY------------GKNS--VIVV  277 (437)
T ss_dssp             GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE-EEEEEEECTTT------------CTTE--EEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC-ceEEEEecccc------------CCCc--cEEE
Confidence            45678999999999999999999999999999999999997 5554 22222221110            0111  3556


Q ss_pred             EcCCCCeEEEeecCCCCeEEEEEec
Q 021797          239 HAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      -+-.+|.|.||++++|..+..+...
T Consensus       278 s~~~dg~i~iwd~~~~~~~~~~~~~  302 (437)
T 3gre_A          278 GGSSKTFLTIWNFVKGHCQYAFINS  302 (437)
T ss_dssp             EESTTEEEEEEETTTTEEEEEEESS
T ss_pred             EEcCCCcEEEEEcCCCcEEEEEEcC
Confidence            7888999999999999999888744

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=97.18  E-value=0.0061  Score=55.29  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=62.8

Q ss_pred             ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCcee----EEeecccccc-----------eeeEEEEEecccccc
Q 021797          157 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVV----VRLWKGYRDA-----------SCVFMEMLVNKDAAT  220 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~i----vRmWKGyRDA-----------qc~Wi~~~~~~~~~~  220 (307)
                      +......+.+++.+|++ +++++....|.|.|+|+.++..    ++.++++.+-           .+.-+....      
T Consensus       222 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------  295 (447)
T 3dw8_B          222 MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH------  295 (447)
T ss_dssp             GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT------
T ss_pred             ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC------
Confidence            44556678999999998 9999999999999999999998    8999998762           222222211      


Q ss_pred             cccccCCCCCCcceEEEEEcCCCCeEEEeecCC-CCeEEEEEec
Q 021797          221 SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRT-GPRLLTIQCA  263 (307)
Q Consensus       221 ~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~-G~RV~a~~v~  263 (307)
                                +.. +|+. +-. |.|.||++++ +..+..+...
T Consensus       296 ----------~g~-~l~~-~~~-~~v~iwd~~~~~~~~~~~~~~  326 (447)
T 3dw8_B          296 ----------SGR-YMMT-RDY-LSVKVWDLNMENRPVETYQVH  326 (447)
T ss_dssp             ----------TSS-EEEE-EES-SEEEEEETTCCSSCSCCEESC
T ss_pred             ----------CCC-EEEE-eeC-CeEEEEeCCCCccccceeecc
Confidence                      111 4444 334 9999999998 8777776643

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.18  E-value=0.0092  Score=51.86  Aligned_cols=88  Identities=10%  Similarity=0.084  Sum_probs=63.9

Q ss_pred             ccccCCCceeeEEEECCC---CCEEEEEcCCCcEEEEEcCC-ceeE-EeecccccceeeEEEEEecccccccccccCCCC
Q 021797          155 TCLKDHPRKGERLTLSPS---GSLAAITDSLGRILLLDTQA-LVVV-RLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~---~~lAavtDslGRV~LiD~~~-~~iv-RmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      ..+..+...+.+|+.+|+   |++++++...|.|.|+|+.+ +..+ +.++|+.+.    |....-.             
T Consensus        33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~-------------   95 (368)
T 3mmy_A           33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGP----VLDVCWS-------------   95 (368)
T ss_dssp             ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSC----EEEEEEC-------------
T ss_pred             EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCC----EEEEEEC-------------
Confidence            446677889999999998   69999999999999999996 5444 888887763    2221110             


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++..  +++-+-.+|.|.||+++++..+....
T Consensus        96 ~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~  125 (368)
T 3mmy_A           96 DDGS--KVFTASCDKTAKMWDLSSNQAIQIAQ  125 (368)
T ss_dssp             TTSS--EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             cCCC--EEEEEcCCCcEEEEEcCCCCceeecc
Confidence            0111  33466789999999999888766443

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=97.17  E-value=0.0097  Score=54.66  Aligned_cols=118  Identities=15%  Similarity=0.200  Sum_probs=74.7

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc------------eeEEeecccccceeeEEEEEecccccccccccCC
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL------------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP  227 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~------------~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~  227 (307)
                      ....+.+|+.+|+|+++++....|.|.|+|+.+.            .....+.|+.+    ++....-..          
T Consensus       255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~~----------  320 (393)
T 1erj_A          255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD----FVLSVATTQ----------  320 (393)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSS----CEEEEEECG----------
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC----cEEEEEECC----------
Confidence            3456788999999999999999999999999864            44556677766    343222110          


Q ss_pred             CCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEeccCcccccc--cCCCCCcc-cEEEEEeCCCCceEEEec
Q 021797          228 VKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSS--MASSPYVP-LEVFLLNGDSGQLSVLNR  304 (307)
Q Consensus       228 ~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~--~~~~~~~~-~~~~ll~~~~g~l~~in~  304 (307)
                         +..  +++-+..+|.|.||++++|..+..+..-.+.        +.+.  .....++| .+.++--..||.|+.-+.
T Consensus       321 ---~~~--~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~--------v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~  387 (393)
T 1erj_A          321 ---NDE--YILSGSKDRGVLFWDKKSGNPLLMLQGHRNS--------VISVAVANGSSLGPEYNVFATGSGDCKARIWKY  387 (393)
T ss_dssp             ---GGC--EEEEEETTSEEEEEETTTCCEEEEEECCSSC--------EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred             ---CCC--EEEEEeCCCeEEEEECCCCeEEEEECCCCCC--------EEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence               111  3456778999999999999988877633221        1111  11123555 344555556888887653

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=97.16  E-value=0.0014  Score=59.83  Aligned_cols=86  Identities=14%  Similarity=0.167  Sum_probs=64.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+|+.+|+|+++++....|.|.|+|+.++..++.++|+.+.    +....-..          . .+ .  +
T Consensus       135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~----v~~v~~s~----------~-~~-~--~  196 (357)
T 4g56_B          135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE----VNCVAACP----------G-KD-T--I  196 (357)
T ss_dssp             ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECT----------T-CS-S--C
T ss_pred             cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC----EEEEEEcc----------C-CC-c--e
Confidence            4456677899999999999999999999999999999999999998873    32221100          0 01 1  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                      ++.+..+|.|.||+++++..+..+
T Consensus       197 ~~s~~~dg~v~~wd~~~~~~~~~~  220 (357)
T 4g56_B          197 FLSCGEDGRILLWDTRKPKPATRI  220 (357)
T ss_dssp             EEEEETTSCEEECCTTSSSCBCBC
T ss_pred             eeeeccCCceEEEECCCCceeeee
Confidence            355677899999999887655433

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=97.16  E-value=0.0033  Score=65.79  Aligned_cols=88  Identities=13%  Similarity=0.134  Sum_probs=68.6

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +..+...+.+++.+|+|+++|++...|.|.++|+.++..++.++|+.+.    +....-..          . .+.  .+
T Consensus       653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~----v~~~~~~~----------~-~~~--~~  715 (1249)
T 3sfz_A          653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQ----VNCCHFTN----------K-SNH--LL  715 (1249)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEECS----------S-SSC--CE
T ss_pred             eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc----EEEEEEec----------C-CCc--eE
Confidence            5556677889999999999999999999999999999999999998763    32221110          0 011  35


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+..+|.|.||++++|..+..+.
T Consensus       716 l~sg~~d~~v~vwd~~~~~~~~~~~  740 (1249)
T 3sfz_A          716 LATGSNDFFLKLWDLNQKECRNTMF  740 (1249)
T ss_dssp             EEEEETTSCEEEEETTSSSEEEEEC
T ss_pred             EEEEeCCCeEEEEECCCcchhheec
Confidence            6677889999999999999887765

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.16  E-value=0.006  Score=53.06  Aligned_cols=89  Identities=10%  Similarity=0.172  Sum_probs=65.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc--eeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +......+.+++.+|+++++++++..|.|.++|+.++..+++. ++.+.  .+.|..   .              ++.  
T Consensus        82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~~~---~--------------~~~--  141 (368)
T 3mmy_A           82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA-QHDAPVKTIHWIK---A--------------PNY--  141 (368)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEEEE---C--------------SSC--
T ss_pred             eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec-cccCceEEEEEEe---C--------------CCC--
Confidence            4445667889999999999999999999999999999988854 44432  122221   1              111  


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      -+++.+-.+|.|.||+++++..+..+.....
T Consensus       142 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  172 (368)
T 3mmy_A          142 SCVMTGSWDKTLKFWDTRSSNPMMVLQLPER  172 (368)
T ss_dssp             EEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred             CEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence            2456778899999999999998888876554

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.15  E-value=0.0035  Score=54.63  Aligned_cols=84  Identities=13%  Similarity=0.205  Sum_probs=62.6

Q ss_pred             CCceeeEEEECCC----CCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          160 HPRKGERLTLSPS----GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       160 ~~R~~~~I~lsP~----~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      ....+.+++.+|+    |++++++...|.|.++|+.++..++.++|+.+. +.-+.....               +..  
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~---------------~~~--  129 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNA-INELKFHPR---------------DPN--  129 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSC-EEEEEECSS---------------CTT--
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCc-EEEEEECCC---------------CCC--
Confidence            3456788899998    779999999999999999999999999988762 222221110               111  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +++-+-.+|.|.||+++++..+..+.
T Consensus       130 ~l~s~~~dg~i~iwd~~~~~~~~~~~  155 (366)
T 3k26_A          130 LLLSVSKDHALRLWNIQTDTLVAIFG  155 (366)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEEeCCCeEEEEEeecCeEEEEec
Confidence            34556679999999999998887774

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=97.14  E-value=0.0022  Score=57.23  Aligned_cols=83  Identities=22%  Similarity=0.248  Sum_probs=63.9

Q ss_pred             CceeeEEEECCCCCEEEEEcCC---CcEEEEEcCCceeEEeecc-------------cccceeeEEEEEecccccccccc
Q 021797          161 PRKGERLTLSPSGSLAAITDSL---GRILLLDTQALVVVRLWKG-------------YRDASCVFMEMLVNKDAATSSAY  224 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDsl---GRV~LiD~~~~~ivRmWKG-------------yRDAqc~Wi~~~~~~~~~~~~~~  224 (307)
                      ...+.+|+.+|++++++++...   |.|.++|+.++..++.+++             +.+    ++....-.        
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~--------  300 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS----WVMSLSFN--------  300 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS----CEEEEEEC--------
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC----cEEEEEEC--------
Confidence            6778999999999999998777   9999999999999999998             554    23221110        


Q ss_pred             cCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          225 YAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       225 ~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                           ++..  +++-+..+|.|.||+++++..+..+..
T Consensus       301 -----~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~  331 (397)
T 1sq9_A          301 -----DSGE--TLCSAGWDGKLRFWDVKTKERITTLNM  331 (397)
T ss_dssp             -----SSSS--EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             -----CCCC--EEEEEeCCCeEEEEEcCCCceeEEEec
Confidence                 0111  334566899999999999999988873

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=97.12  E-value=0.0044  Score=52.91  Aligned_cols=84  Identities=17%  Similarity=0.217  Sum_probs=64.1

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....+..++.+|+++ +++....|.|.++|+.++..++.++++.+    .+....-.             ++. .  ++.
T Consensus       183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~-------------~~~-~--l~~  241 (313)
T 3odt_A          183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES----FVYCIKLL-------------PNG-D--IVS  241 (313)
T ss_dssp             CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEEC-------------TTS-C--EEE
T ss_pred             CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc----eEEEEEEe-------------cCC-C--EEE
Confidence            566688999999999 66778889999999999999999998876    33322111             111 1  345


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecC
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +-.+|.|.||+++++..+..+....
T Consensus       242 ~~~dg~v~iwd~~~~~~~~~~~~~~  266 (313)
T 3odt_A          242 CGEDRTVRIWSKENGSLKQVITLPA  266 (313)
T ss_dssp             EETTSEEEEECTTTCCEEEEEECSS
T ss_pred             EecCCEEEEEECCCCceeEEEeccC
Confidence            6779999999999999988887554

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.11  E-value=0.007  Score=55.03  Aligned_cols=89  Identities=12%  Similarity=0.159  Sum_probs=67.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.-+...+..++.+|++++++++...|.|.|+|+.++..++.++|+... +.-+.....              .+.  -+
T Consensus       150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~--------------~~g--~~  212 (354)
T 2pbi_B          150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGAD-VLCLDLAPS--------------ETG--NT  212 (354)
T ss_dssp             EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECCC--------------SSC--CE
T ss_pred             eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC-eEEEEEEeC--------------CCC--CE
Confidence            4556677889999999999999989999999999999999999998762 111111111              011  14


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++-+..+|.|.+|++++|..+..+..
T Consensus       213 l~sgs~Dg~v~~wd~~~~~~~~~~~~  238 (354)
T 2pbi_B          213 FVSGGCDKKAMVWDMRSGQCVQAFET  238 (354)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEecC
Confidence            46677899999999999998877753

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=97.11  E-value=0.016  Score=50.68  Aligned_cols=90  Identities=17%  Similarity=0.185  Sum_probs=62.2

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEE-EEecccccccccccCCCCCCcceEEEEE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME-MLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~-~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ......++++|+|+++++++..|+|.++|+.++.+++.++.-.+..-.++. +.-..+             ..  +|++-
T Consensus       184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-------------g~--~l~~~  248 (353)
T 3vgz_A          184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA-------------RQ--RAFIT  248 (353)
T ss_dssp             CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT-------------TT--EEEEE
T ss_pred             CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC-------------CC--EEEEE
Confidence            344677899999999999999999999999999999887652221111111 111101             11  33344


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      ....+.|.+|++.+|..+..+.++..
T Consensus       249 ~~~~~~v~~~d~~~~~~~~~~~~~~~  274 (353)
T 3vgz_A          249 DSKAAEVLVVDTRNGNILAKVAAPES  274 (353)
T ss_dssp             ESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred             eCCCCEEEEEECCCCcEEEEEEcCCC
Confidence            45669999999999999988887654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=97.09  E-value=0.0039  Score=53.19  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=62.3

Q ss_pred             ccCCCceeeEEEECCCC----CEEEEEcCCCcEEEEEcCCc---------------------------------------
Q 021797          157 LKDHPRKGERLTLSPSG----SLAAITDSLGRILLLDTQAL---------------------------------------  193 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~----~lAavtDslGRV~LiD~~~~---------------------------------------  193 (307)
                      +......+.+++.+|++    +++++....|.|.++|+.++                                       
T Consensus       210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (351)
T 3f3f_A          210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE  289 (351)
T ss_dssp             CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred             cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence            55566778999999998    89999999999999999986                                       


Q ss_pred             -------eeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          194 -------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       194 -------~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                             ..++.++|+.+.    |....-          .   ++..  +++-+..+|.|.||++.++..+..+.+
T Consensus       290 ~~~~~~~~~~~~~~~h~~~----v~~~~~----------s---~~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~  346 (351)
T 3f3f_A          290 LQSNLQVELLSEHDDHNGE----VWSVSW----------N---LTGT--ILSSAGDDGKVRLWKATYSNEFKCMSV  346 (351)
T ss_dssp             -CCSEEEEEEEEECTTSSC----EEEEEE----------C---SSSC--CEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred             ecccccccEEEEEeccccc----EEEEEE----------c---CCCC--EEEEecCCCcEEEEecCcCcchhheee
Confidence                   555556665542    211110          0   0111  446677899999999999988777664

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.09  E-value=0.016  Score=51.74  Aligned_cols=84  Identities=12%  Similarity=0.059  Sum_probs=60.0

Q ss_pred             eeeEEEECCCCCEEE-EEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSPSGSLAA-ITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP~~~lAa-vtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....++++|+|++++ +....|.|.++|+.++.+++.+++..  .+.-+....+               ..  +|++-..
T Consensus        33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spd---------------g~--~l~~~~~   93 (391)
T 1l0q_A           33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPD---------------GK--QVYVTNM   93 (391)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTT---------------SS--EEEEEET
T ss_pred             CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCC---------------CC--EEEEEEC
Confidence            468999999998764 45578999999999999999887654  2222222111               11  3555566


Q ss_pred             CCCeEEEeecCCCCeEEEEEecCC
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      ..|.|.||++.+|+.+..+..+..
T Consensus        94 ~~~~v~v~d~~~~~~~~~~~~~~~  117 (391)
T 1l0q_A           94 ASSTLSVIDTTSNTVAGTVKTGKS  117 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEECSSS
T ss_pred             CCCEEEEEECCCCeEEEEEeCCCC
Confidence            779999999999988887775543

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=97.07  E-value=0.0077  Score=52.38  Aligned_cols=82  Identities=13%  Similarity=0.017  Sum_probs=63.3

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCC-ceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~-~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....++.+|+++++++++..|.|.++|+.+ +..++.++++.+.    +....-.             ++..  +++.+-
T Consensus       177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~-------------~~~~--~l~~~~  237 (369)
T 3zwl_B          177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS----ISDMQFS-------------PDLT--YFITSS  237 (369)
T ss_dssp             CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC----EEEEEEC-------------TTSS--EEEEEE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc----eeEEEEC-------------CCCC--EEEEec
Confidence            889999999999999999999999999999 8999999887652    2211110             0111  335667


Q ss_pred             CCCeEEEeecCCCCeEEEEEec
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .+|.|.||+++++..+..+...
T Consensus       238 ~d~~i~v~d~~~~~~~~~~~~~  259 (369)
T 3zwl_B          238 RDTNSFLVDVSTLQVLKKYETD  259 (369)
T ss_dssp             TTSEEEEEETTTCCEEEEEECS
T ss_pred             CCceEEEEECCCCceeeeecCC
Confidence            8999999999999988887743

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=97.05  E-value=0.0052  Score=53.06  Aligned_cols=89  Identities=7%  Similarity=-0.049  Sum_probs=61.3

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      ....++++|+|++++++|  |+|.++|+.++..++.++.-..  ...+....                +.. +|++ +-.
T Consensus       242 ~~~~~~~s~dg~~l~~~~--~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~----------------dg~-~l~~-~~~  299 (337)
T 1pby_B          242 FYFSTAVNPAKTRAFGAY--NVLESFDLEKNASIKRVPLPHS--YYSVNVST----------------DGS-TVWL-GGA  299 (337)
T ss_dssp             CEEEEEECTTSSEEEEEE--SEEEEEETTTTEEEEEEECSSC--CCEEEECT----------------TSC-EEEE-ESB
T ss_pred             ceeeEEECCCCCEEEEeC--CeEEEEECCCCcCcceecCCCc--eeeEEECC----------------CCC-EEEE-EcC
Confidence            345699999999888884  9999999999998887763211  11111110                111 2333 356


Q ss_pred             CCeEEEeecCCCCeEEEEEecCCeEEeccCc
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAKGSKILQPTY  273 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~  273 (307)
                      .|.|.||++.+|..+..+.++.+..++..+.
T Consensus       300 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  330 (337)
T 1pby_B          300 LGDLAAYDAETLEKKGQVDLPGNASMSLASV  330 (337)
T ss_dssp             SSEEEEEETTTCCEEEEEECGGGCCCBTCCC
T ss_pred             CCcEEEEECcCCcEEEEEEcCCCCceeEeee
Confidence            8999999999999999999886654444433

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=97.04  E-value=0.001  Score=59.78  Aligned_cols=93  Identities=13%  Similarity=0.094  Sum_probs=64.4

Q ss_pred             CCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          159 DHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       159 D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....+.+|+.+| ++++++++...|+|.|+|+.++..++..+++......+.....        ....   ++..+..+
T Consensus       248 ~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---p~~~~~~~  316 (383)
T 3ei3_B          248 PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK--------ATWH---PMYDLIVA  316 (383)
T ss_dssp             ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC--------CEEC---SSSSEEEE
T ss_pred             cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE--------Eecc---CCCCceEE
Confidence            4567789999999 9999999999999999999999998888877643221110000        0000   01122233


Q ss_pred             EEc-------CCCCeEEEeecCCCCeEEEEEe
Q 021797          238 IHA-------PRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       238 Iya-------prRg~lEVW~~~~G~RV~a~~v  262 (307)
                      -+.       ..+|.|.||++.+|..+..+..
T Consensus       317 ~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~  348 (383)
T 3ei3_B          317 GRYPDDQLLLNDKRTIDIYDANSGGLVHQLRD  348 (383)
T ss_dssp             ECBCCTTTCTTCCCCEEEEETTTCCEEEEECB
T ss_pred             EecCCcccccCCCCeEEEEecCCCceeeeecC
Confidence            333       3789999999999999888763

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=97.04  E-value=0.0077  Score=53.72  Aligned_cols=85  Identities=15%  Similarity=0.176  Sum_probs=63.4

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecc---c---ccceeeEEEEEecccccccccccCCCCCC
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG---Y---RDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKG---y---RDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      ......+.+++.+|++ ++++....|.|.++|+.++..++.+++   +   .. .+.-+....                +
T Consensus       183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~-~i~~i~~~~----------------~  244 (397)
T 1sq9_A          183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN-SIRSVKFSP----------------Q  244 (397)
T ss_dssp             SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC-CEEEEEECS----------------S
T ss_pred             cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCC-ccceEEECC----------------C
Confidence            3456778999999999 999999999999999999999999998   5   32 222222111                1


Q ss_pred             cceEEEEEcCCC---CeEEEeecCCCCeEEEEEe
Q 021797          232 YCLCLAIHAPRK---GIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       232 ~~l~LVIyaprR---g~lEVW~~~~G~RV~a~~v  262 (307)
                      ..  +++.+-.+   |.|.||+++++..+..+..
T Consensus       245 ~~--~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~  276 (397)
T 1sq9_A          245 GS--LLAIAHDSNSFGCITLYETEFGERIGSLSV  276 (397)
T ss_dssp             TT--EEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred             CC--EEEEEecCCCCceEEEEECCCCcccceecc
Confidence            11  33455567   9999999999999888875

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=97.04  E-value=0.014  Score=53.33  Aligned_cols=81  Identities=17%  Similarity=0.220  Sum_probs=61.6

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....+.+++.+|++++++++...|.|.++|+.++..++.++|+.+.-.. +..  +.                .  +++.
T Consensus       133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-~~~--~~----------------~--~l~~  191 (401)
T 4aez_A          133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGC-LSW--NR----------------H--VLSS  191 (401)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE-EEE--ET----------------T--EEEE
T ss_pred             CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEE-EEE--CC----------------C--EEEE
Confidence            4566889999999999999999999999999999999999988774222 111  10                1  4466


Q ss_pred             cCCCCeEEEeecCC-CCeEEEEE
Q 021797          240 APRKGIIEVWQMRT-GPRLLTIQ  261 (307)
Q Consensus       240 aprRg~lEVW~~~~-G~RV~a~~  261 (307)
                      +-.+|.|.||+++. +..+..+.
T Consensus       192 ~~~dg~i~i~d~~~~~~~~~~~~  214 (401)
T 4aez_A          192 GSRSGAIHHHDVRIANHQIGTLQ  214 (401)
T ss_dssp             EETTSEEEEEETTSSSCEEEEEE
T ss_pred             EcCCCCEEEEecccCcceeeEEc
Confidence            77899999999994 44444443

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=97.00  E-value=0.008  Score=62.93  Aligned_cols=89  Identities=12%  Similarity=0.091  Sum_probs=69.8

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +..+...+..++.+|+|+++|+....|.|.++|+.++..++.++|+.+    +|....-..             +.. +|
T Consensus       611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~----~v~~~~~s~-------------~~~-~l  672 (1249)
T 3sfz_A          611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED----EVLCCAFSS-------------DDS-YI  672 (1249)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS----CEEEEEECT-------------TSS-EE
T ss_pred             EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC----CEEEEEEec-------------CCC-EE
Confidence            566778899999999999999999999999999999999999999877    443322110             111 33


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                       +-+-.+|.|.||++.+|..+..+....
T Consensus       673 -~s~~~d~~v~vwd~~~~~~~~~~~~~~  699 (1249)
T 3sfz_A          673 -ATCSADKKVKIWDSATGKLVHTYDEHS  699 (1249)
T ss_dssp             -EEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred             -EEEeCCCeEEEEECCCCceEEEEcCCC
Confidence             445579999999999999998887443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.00  E-value=0.016  Score=52.68  Aligned_cols=87  Identities=9%  Similarity=0.088  Sum_probs=64.4

Q ss_pred             cccCCCceeeEEEECC--CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          156 CLKDHPRKGERLTLSP--SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP--~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      .+..+...+..+.++|  +|+++++....|.|.++|+.++..++.++|+.+    +|....-.             ++..
T Consensus       191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~----~v~~v~~~-------------p~~~  253 (354)
T 2pbi_B          191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES----DVNSVRYY-------------PSGD  253 (354)
T ss_dssp             EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS----CEEEEEEC-------------TTSS
T ss_pred             EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC----CeEEEEEe-------------CCCC
Confidence            3555556677888888  578999999999999999999999999999876    44332211             0111


Q ss_pred             eEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                        +++-+..+|.|.||+++.+..+..+.
T Consensus       254 --~l~s~s~D~~v~lwd~~~~~~~~~~~  279 (354)
T 2pbi_B          254 --AFASGSDDATCRLYDLRADREVAIYS  279 (354)
T ss_dssp             --EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             --EEEEEeCCCeEEEEECCCCcEEEEEc
Confidence              34567789999999999887766554

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=96.97  E-value=0.005  Score=56.11  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=67.4

Q ss_pred             CCccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCceeEEee--cccccceeeEEEEEecccccccccccCCCC
Q 021797          153 PLTCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLW--KGYRDASCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       153 pl~~l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmW--KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      ++..+..+...+..|+.+|++ +++++++..|.|.++|+.++..++.+  +++.+    .+....-.             
T Consensus       123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~-------------  185 (402)
T 2aq5_A          123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD----TIYSVDWS-------------  185 (402)
T ss_dssp             CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS----CEEEEEEC-------------
T ss_pred             ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC----ceEEEEEC-------------
Confidence            445577788899999999998 69999999999999999999999999  77766    22221110             


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                      ++..  +++.+-.+|.|.||+++++..+..+
T Consensus       186 ~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~  214 (402)
T 2aq5_A          186 RDGA--LICTSCRDKRVRVIEPRKGTVVAEK  214 (402)
T ss_dssp             TTSS--CEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             CCCC--EEEEEecCCcEEEEeCCCCceeeee
Confidence            0111  2345668999999999998888777

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=96.95  E-value=0.0058  Score=53.72  Aligned_cols=78  Identities=8%  Similarity=-0.020  Sum_probs=59.0

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eEEeecccccc--eeeEEEEEecccccccccccCCCCCCcceE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +...+.+++.+|+++++|++...|.|.|+|+.++.  .++.++|+.+.  .+.|.   .+                ..  
T Consensus         7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~----------------~~--   65 (372)
T 1k8k_C            7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA---PD----------------SN--   65 (372)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE---TT----------------TT--
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEe---CC----------------CC--
Confidence            46678999999999999999999999999999998  88899988773  12221   11                11  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLL  258 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~  258 (307)
                      +++.+-.+|.|.||++.++....
T Consensus        66 ~l~~~~~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C           66 RIVTCGTDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEE
T ss_pred             EEEEEcCCCeEEEEECCCCeeee
Confidence            33456678999999988775333

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.93  E-value=0.011  Score=54.44  Aligned_cols=51  Identities=14%  Similarity=0.072  Sum_probs=45.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccccee
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC  207 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc  207 (307)
                      +..+...+.+|+.+|+|+++|+....|.|.|+|+.++..++.++|+...-.
T Consensus       143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~  193 (420)
T 4gga_A          143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG  193 (420)
T ss_dssp             CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred             ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence            445566789999999999999999999999999999999999999987443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=96.93  E-value=0.013  Score=51.79  Aligned_cols=91  Identities=18%  Similarity=0.139  Sum_probs=64.4

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeec-------------ccccceeeEEEEEecccccccc
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWK-------------GYRDASCVFMEMLVNKDAATSS  222 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWK-------------GyRDAqc~Wi~~~~~~~~~~~~  222 (307)
                      +.-+...+.+|+.+| +++++|++...|.|.++|+.++..++..+             |+.+    .|....-       
T Consensus        39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~-------  107 (408)
T 4a11_B           39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY----SVETVQW-------  107 (408)
T ss_dssp             CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS----CEEEEEE-------
T ss_pred             eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC----cEEEEEE-------
Confidence            334677899999999 99999999999999999999988777664             2222    1211110       


Q ss_pred             cccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          223 AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       223 ~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                         .+.  +..  +++.+-.+|.|.||+++++..+..+.....
T Consensus       108 ---~~~--~~~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  143 (408)
T 4a11_B          108 ---YPH--DTG--MFTSSSFDKTLKVWDTNTLQTADVFNFEET  143 (408)
T ss_dssp             ---CTT--CTT--CEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred             ---ccC--CCc--EEEEEeCCCeEEEeeCCCCccceeccCCCc
Confidence               010  111  335567799999999999999888875544

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=96.87  E-value=0.02  Score=51.32  Aligned_cols=78  Identities=17%  Similarity=0.177  Sum_probs=60.2

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|..+...+..++.+|++++++++...|.|.|+|+.++..++.++|+.+.    |....-.             ++..  
T Consensus        71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~----v~~v~~s-------------p~~~--  131 (343)
T 2xzm_R           71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE----VYSVAFS-------------PDNR--  131 (343)
T ss_dssp             EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSC----EEEEEEC-------------SSTT--
T ss_pred             hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc----EEEEEEC-------------CCCC--
Confidence            35566777899999999999999999999999999999999999998873    3221110             0111  


Q ss_pred             EEEEcCCCCeEEEeecC
Q 021797          236 LAIHAPRKGIIEVWQMR  252 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~  252 (307)
                      +++-+..+|.|.||++.
T Consensus       132 ~l~s~~~d~~i~~wd~~  148 (343)
T 2xzm_R          132 QILSAGAEREIKLWNIL  148 (343)
T ss_dssp             EEEEEETTSCEEEEESS
T ss_pred             EEEEEcCCCEEEEEecc
Confidence            33567789999999996

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=96.85  E-value=0.032  Score=47.72  Aligned_cols=53  Identities=13%  Similarity=0.075  Sum_probs=46.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF  209 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~W  209 (307)
                      +..+...+.+++.+|+++++|+....|.|.|+|+.++..++.++|+......+
T Consensus        63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~  115 (318)
T 4ggc_A           63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL  115 (318)
T ss_dssp             CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred             ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence            44566778999999999999999999999999999999999999998855443

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=96.82  E-value=0.0077  Score=59.05  Aligned_cols=89  Identities=20%  Similarity=0.191  Sum_probs=67.9

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeec-------ccccceeeEEEEEecccccccccccCCC
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK-------GYRDASCVFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK-------GyRDAqc~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      .|..+...+.+++.+|+|+++|++...|.|.|+|+.++..++.++       |+.+    +|....-.            
T Consensus       185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~----~V~~v~~s------------  248 (611)
T 1nr0_A          185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG----SVFGLTWS------------  248 (611)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS----CEEEEEEC------------
T ss_pred             eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCC----CEEEEEEC------------
Confidence            356667788999999999999999999999999999999999884       5655    33222110            


Q ss_pred             CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       229 k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                       ++..  +++-+..+|.|.||++++|..+..+..+
T Consensus       249 -pdg~--~l~s~s~D~~v~lWd~~~~~~~~~~~~~  280 (611)
T 1nr0_A          249 -PDGT--KIASASADKTIKIWNVATLKVEKTIPVG  280 (611)
T ss_dssp             -TTSS--EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             -CCCC--EEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence             0111  3456778999999999999988887654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=96.80  E-value=0.0099  Score=51.70  Aligned_cols=79  Identities=11%  Similarity=-0.053  Sum_probs=57.5

Q ss_pred             eeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....++++| +|++++++  .|+|.++|+.++.+++.++.-...  ..+....  +            . .  +|++ +-
T Consensus       256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~s~--d------------g-~--~l~~-~~  313 (349)
T 1jmx_B          256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY--YCVAFDK--K------------G-D--KLYL-GG  313 (349)
T ss_dssp             CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC--CEEEECS--S------------S-S--CEEE-ES
T ss_pred             cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc--cceEECC--C------------C-C--EEEE-ec
Confidence            456889999 99988888  789999999999999887632221  1121111  1            1 1  2334 56


Q ss_pred             CCCeEEEeecCCCCeEEEEEec
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      ..|.|.||++.++..+..+.++
T Consensus       314 ~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          314 TFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             BSSEEEEEETTTTEEEEEEECS
T ss_pred             CCCeEEEEeccccceeeeeecC
Confidence            6799999999999999999887

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=96.79  E-value=0.02  Score=51.20  Aligned_cols=89  Identities=13%  Similarity=0.231  Sum_probs=66.9

Q ss_pred             ccccCCCceeeEEEE-----CC-CCCEEEEEcCCCcEEEEEcCC-------ceeEEeecccccceeeEEEEEeccccccc
Q 021797          155 TCLKDHPRKGERLTL-----SP-SGSLAAITDSLGRILLLDTQA-------LVVVRLWKGYRDASCVFMEMLVNKDAATS  221 (307)
Q Consensus       155 ~~l~D~~R~~~~I~l-----sP-~~~lAavtDslGRV~LiD~~~-------~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~  221 (307)
                      ..|..+...+.+|+.     +| +++++|+....|.|.|+|+.+       +..++..+|+.+    .|....-.     
T Consensus        15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~----~V~~~~~~-----   85 (343)
T 2xzm_R           15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH----FVSDLALS-----   85 (343)
T ss_dssp             EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS----CEEEEEEC-----
T ss_pred             eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC----ceEEEEEC-----
Confidence            447778888999998     77 899999999999999999974       567788888887    33322111     


Q ss_pred             ccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       222 ~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                              ++..  +++-+..+|.|.||++++|..+..+..
T Consensus        86 --------~~~~--~l~s~s~D~~v~lwd~~~~~~~~~~~~  116 (343)
T 2xzm_R           86 --------QENC--FAISSSWDKTLRLWDLRTGTTYKRFVG  116 (343)
T ss_dssp             --------SSTT--EEEEEETTSEEEEEETTSSCEEEEEEC
T ss_pred             --------CCCC--EEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence                    0111  456788899999999999988877653

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=96.78  E-value=0.018  Score=51.65  Aligned_cols=88  Identities=14%  Similarity=0.111  Sum_probs=61.8

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+.+|+.+|+++++|+....|.|.|+|+.++..+..++.- ...+ .+....-          .   ++..  +
T Consensus       222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~~~-~v~~~~~----------s---~~g~--~  284 (340)
T 1got_B          222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIIC-GITSVSF----------S---KSGR--L  284 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCS-CEEEEEE----------C---TTSS--E
T ss_pred             EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-Cccc-ceEEEEE----------C---CCCC--E
Confidence            4555667889999999999999999999999999999888776421 1111 1111100          0   1111  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+-.+|.|.||+++++.++..+.
T Consensus       285 l~~g~~d~~i~vwd~~~~~~~~~~~  309 (340)
T 1got_B          285 LLAGYDDFNCNVWDALKADRAGVLA  309 (340)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EEEECCCCeEEEEEcccCcEeeEee
Confidence            4556779999999999999887765

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=96.78  E-value=0.0048  Score=57.53  Aligned_cols=87  Identities=17%  Similarity=0.189  Sum_probs=66.4

Q ss_pred             ccCCCceeeEEEECCC---CCEEEEEcCCCcEEEEEcCCceeEEe-ecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPS---GSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~---~~lAavtDslGRV~LiD~~~~~ivRm-WKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +......+.+|+.+|+   ++++++++..|.|.++|+.++..++. ..|+.+    ++....-.+          .    
T Consensus       191 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~sd----------~----  252 (450)
T 2vdu_B          191 ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH----FVSSICCGK----------D----  252 (450)
T ss_dssp             SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS----CEEEEEECS----------T----
T ss_pred             eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC----ceEEEEECC----------C----
Confidence            4455677899999999   99999999999999999999988877 457765    333221111          1    


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      .  +++.+-.+|.|.||++++|..+..+.+.
T Consensus       253 ~--~l~s~~~d~~v~vwd~~~~~~~~~~~~~  281 (450)
T 2vdu_B          253 Y--LLLSAGGDDKIFAWDWKTGKNLSTFDYN  281 (450)
T ss_dssp             T--EEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred             C--EEEEEeCCCeEEEEECCCCcEeeeecch
Confidence            1  3456678999999999999999888754

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.032  Score=50.94  Aligned_cols=87  Identities=16%  Similarity=0.365  Sum_probs=63.7

Q ss_pred             CceeeEEE--ECCCCCEEEEEcCCCcEEEEEcCCceeEEeecc--cccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          161 PRKGERLT--LSPSGSLAAITDSLGRILLLDTQALVVVRLWKG--YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       161 ~R~~~~I~--lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKG--yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      ......+.  .+|+++++++....|.|.++|+.++..++.+++  +.+    .|....-.             ++.  -+
T Consensus       168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~----~v~~~~~s-------------~~~--~~  228 (437)
T 3gre_A          168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG----AVSSICID-------------EEC--CV  228 (437)
T ss_dssp             CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC----CEEEEEEC-------------TTS--CE
T ss_pred             ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC----ceEEEEEC-------------CCC--CE
Confidence            33444444  668999999999999999999999999999998  444    33322111             011  14


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecCCe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGS  266 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~~~  266 (307)
                      ++-+-.+|.|.||+++++..+..+..+...
T Consensus       229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  258 (437)
T 3gre_A          229 LILGTTRGIIDIWDIRFNVLIRSWSFGDHA  258 (437)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred             EEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence            466778999999999999999888765443

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=96.75  E-value=0.015  Score=49.79  Aligned_cols=80  Identities=11%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      ..|.=||++-||+..|  +.|.|+|+.+|..++..++.....  +|....-.             ++..  +++-+..+|
T Consensus        29 ~~l~WS~~~~lAvg~D--~tV~iWd~~tg~~~~~~~~~~~~~--~V~~v~~~-------------~~~~--~l~sgs~Dg   89 (318)
T 4ggc_A           29 NLVDWSSGNVLAVALD--NSVYLWSASSGDILQLLQMEQPGE--YISSVAWI-------------KEGN--YLAVGTSSA   89 (318)
T ss_dssp             BCEEECTTSEEEEEET--TEEEEEETTTCCEEEEEECCSTTC--CEEEEEEC-------------TTSS--EEEEEETTS
T ss_pred             eEEEECCCCEEEEEeC--CEEEEEECCCCCEEEEEEecCCCC--eEEEEEEC-------------CCCC--EEEEEECCC
Confidence            3477799987766665  689999999999999998654422  23221110             0111  335677899


Q ss_pred             eEEEeecCCCCeEEEEEec
Q 021797          245 IIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       245 ~lEVW~~~~G~RV~a~~v~  263 (307)
                      .|.||++++|..+..+...
T Consensus        90 ~v~iw~~~~~~~~~~~~~h  108 (318)
T 4ggc_A           90 EVQLWDVQQQKRLRNMTSH  108 (318)
T ss_dssp             EEEEEETTTTEEEEEEECC
T ss_pred             cEEEeecCCceeEEEecCc
Confidence            9999999999998887643

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=96.74  E-value=0.0098  Score=54.54  Aligned_cols=96  Identities=16%  Similarity=0.141  Sum_probs=63.1

Q ss_pred             CccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          154 LTCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +..|.-+...+.+++.+|++ ++++++...|.|.|+|+.++..++..+......  .+....-          .+.  +.
T Consensus       162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~----------~p~--~~  227 (344)
T 4gqb_B          162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY--LPTSLAW----------HPQ--QS  227 (344)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC--CEEEEEE----------CSS--CT
T ss_pred             EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeec--cceeeee----------cCC--CC
Confidence            34466667788999999987 577888888999999999999888775433211  1111100          000  11


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                        .+++.+-.+|.|.||++++|..+..+..-.+
T Consensus       228 --~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~  258 (344)
T 4gqb_B          228 --EVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ  258 (344)
T ss_dssp             --TEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred             --cceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence              1446677899999999999998888875443

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=96.74  E-value=0.011  Score=51.43  Aligned_cols=82  Identities=13%  Similarity=0.124  Sum_probs=61.3

Q ss_pred             ccccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEee---cccccceeeEEEEEecccccccccccCCCCC
Q 021797          155 TCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLW---KGYRDASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmW---KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      ..+......+..|+.+| +++++++....|.|.++|+.++..++.+   +++.+    .+....-.             +
T Consensus       109 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~v~~~~~~-------------~  171 (366)
T 3k26_A          109 KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD----EVLSADYD-------------L  171 (366)
T ss_dssp             EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS----CEEEEEEC-------------T
T ss_pred             eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC----ceeEEEEC-------------C
Confidence            44666788899999999 8999999999999999999999999999   55554    23222110             0


Q ss_pred             CcceEEEEEcCCCCeEEEeecCCCC
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                      +..  +++.+-.+|.|.||+++++.
T Consensus       172 ~~~--~l~~~~~dg~i~i~d~~~~~  194 (366)
T 3k26_A          172 LGE--KIMSCGMDHSLKLWRINSKR  194 (366)
T ss_dssp             TSS--EEEEEETTSCEEEEESCSHH
T ss_pred             CCC--EEEEecCCCCEEEEECCCCc
Confidence            111  34566679999999999654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=96.72  E-value=0.01  Score=53.81  Aligned_cols=73  Identities=11%  Similarity=0.125  Sum_probs=57.5

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCC-ceeEEeecccccce-----------------eeEEEEEecccccccccc
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYRDAS-----------------CVFMEMLVNKDAATSSAY  224 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~-~~ivRmWKGyRDAq-----------------c~Wi~~~~~~~~~~~~~~  224 (307)
                      .+.+++.+|+|+++++.+. |.|.|+|+.+ +..++.++|+....                 +.|-.             
T Consensus       287 ~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-------------  352 (447)
T 3dw8_B          287 SISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-------------  352 (447)
T ss_dssp             CEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-------------
T ss_pred             eEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECC-------------
Confidence            7899999999999998877 9999999998 99999999885311                 23320             


Q ss_pred             cCCCCCCcceEEEEEcCCCCeEEEeecCCCCeE
Q 021797          225 YAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       225 ~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV  257 (307)
                            +.. +| +-+-.+|.|.||++++|..+
T Consensus       353 ------~~~-~l-~s~s~dg~v~iwd~~~~~~~  377 (447)
T 3dw8_B          353 ------SDS-VV-MTGSYNNFFRMFDRNTKRDI  377 (447)
T ss_dssp             ------TSS-EE-EEECSTTEEEEEETTTCCEE
T ss_pred             ------CCC-EE-EEeccCCEEEEEEcCCCcce
Confidence                  111 33 67788999999999998876

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=96.72  E-value=0.012  Score=54.68  Aligned_cols=85  Identities=11%  Similarity=0.148  Sum_probs=62.4

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE----eecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR----LWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR----mWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      ...+.+|+.+|+++++++++..|.|.++|+.++...+    .++|+.+. +.-+....+.+            . .  -+
T Consensus       149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~------------~-~--~~  212 (450)
T 2vdu_B          149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSM-LTDVHLIKDSD------------G-H--QF  212 (450)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSC-EEEEEEEECTT------------S-C--EE
T ss_pred             CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCc-eEEEEEcCCCC------------C-C--cE
Confidence            4567899999999999999999999999999988665    77777652 21221111100            0 1  25


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++.+-.+|.|.||+++++..+..+.
T Consensus       213 l~s~~~d~~i~vwd~~~~~~~~~~~  237 (450)
T 2vdu_B          213 IITSDRDEHIKISHYPQCFIVDKWL  237 (450)
T ss_dssp             EEEEETTSCEEEEEESCTTCEEEEC
T ss_pred             EEEEcCCCcEEEEECCCCceeeeee
Confidence            5778889999999999998887754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=96.71  E-value=0.017  Score=52.77  Aligned_cols=90  Identities=13%  Similarity=0.173  Sum_probs=63.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccce---eeEEEEEecccccccccccCCCCCCcc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS---CVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAq---c~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      +..+...+.+|+.+|++++++++...|.|.|+|+.++..++++++..+..   ..++....          ..   ++..
T Consensus       245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~----------~s---~~g~  311 (380)
T 3iz6_a          245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA----------FS---ISGR  311 (380)
T ss_dssp             ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE----------EC---SSSS
T ss_pred             ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE----------EC---CCCC
Confidence            44455668899999999999999999999999999999999997754321   11111000          00   1112


Q ss_pred             eEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                        +++-+-..|.|.||++.++..+..+.
T Consensus       312 --~l~~g~~dg~i~vwd~~~~~~~~~~~  337 (380)
T 3iz6_a          312 --LLFAGYSNGDCYVWDTLLAEMVLNLG  337 (380)
T ss_dssp             --EEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred             --EEEEEECCCCEEEEECCCCceEEEEe
Confidence              33446679999999999998887653

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=96.70  E-value=0.0087  Score=53.59  Aligned_cols=86  Identities=16%  Similarity=0.079  Sum_probs=64.0

Q ss_pred             cccc-CCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          155 TCLK-DHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       155 ~~l~-D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ..+. .....+.+++.+| +++++++....|+|.|+|+.++..++.++++.+    ++....-          .+.  ..
T Consensus       255 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~----------s~~--~~  318 (416)
T 2pm9_A          255 QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN----WCFKTKF----------APE--AP  318 (416)
T ss_dssp             BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS----CCCCEEE----------CTT--CT
T ss_pred             EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC----ceEEEEE----------CCC--CC
Confidence            3354 5667789999999 899999999999999999999999999998775    2211110          000  00


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLL  258 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~  258 (307)
                        .+++.+-.+|.|.||+++++....
T Consensus       319 --~~l~s~~~d~~i~iw~~~~~~~~~  342 (416)
T 2pm9_A          319 --DLFACASFDNKIEVQTLQNLTNTL  342 (416)
T ss_dssp             --TEEEECCSSSEEEEEESCCCCCSS
T ss_pred             --CEEEEEecCCcEEEEEccCCCCCc
Confidence              155778889999999999877543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=96.63  E-value=0.056  Score=47.10  Aligned_cols=82  Identities=16%  Similarity=0.112  Sum_probs=57.4

Q ss_pred             eeeEEEECCCCCEEEEEcCC-CcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSPSGSLAAITDSL-GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDsl-GRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....++++|+|+++.+++.. |+|.++|+.++.+++..+.-....+.|-    .               +.. +|.+-..
T Consensus       232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s----~---------------dg~-~l~v~~~  291 (353)
T 3vgz_A          232 FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFN----P---------------ARN-EAYVTHR  291 (353)
T ss_dssp             CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEE----T---------------TTT-EEEEEET
T ss_pred             ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEEC----C---------------CCC-EEEEEEC
Confidence            35568999999877776654 9999999999999988775332222221    0               111 3445556


Q ss_pred             CCCeEEEeecCCCCeEEEEEecC
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ..|.|.+|++.+|..+..+..+.
T Consensus       292 ~~~~v~~~d~~~~~~~~~~~~~~  314 (353)
T 3vgz_A          292 QAGKVSVIDAKSYKVVKTFDTPT  314 (353)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCS
T ss_pred             CCCeEEEEECCCCeEEEEEecCC
Confidence            67999999999998887776543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=96.62  E-value=0.019  Score=49.35  Aligned_cols=85  Identities=15%  Similarity=0.202  Sum_probs=59.9

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .....+.+++.+|+++++++....|.|.++|+.++.  .+...+++... +.-+....                +..  +
T Consensus        95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-i~~~~~~~----------------~~~--~  155 (337)
T 1gxr_A           95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA-CYALAISP----------------DSK--V  155 (337)
T ss_dssp             CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSC-EEEEEECT----------------TSS--E
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCc-eEEEEECC----------------CCC--E
Confidence            456678899999999999999999999999999887  66666666542 11111110                111  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++.+-.+|.|.||+++++..+..+..
T Consensus       156 l~~~~~dg~v~~~d~~~~~~~~~~~~  181 (337)
T 1gxr_A          156 CFSCCSDGNIAVWDLHNQTLVRQFQG  181 (337)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EEEEeCCCcEEEEeCCCCceeeeeec
Confidence            45566789999999998877766653

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.62  E-value=0.029  Score=50.91  Aligned_cols=88  Identities=8%  Similarity=0.063  Sum_probs=57.0

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+..+...+.+++.+|+|+++|+....| +.++|+.++..+.....- .  ...+.....              . .  +
T Consensus        14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~--~~~~~~~~~--------------~-~--~   72 (355)
T 3vu4_A           14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-H--LSKVRMLHR--------------T-N--Y   72 (355)
T ss_dssp             -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-C--CCEEEECTT--------------S-S--E
T ss_pred             ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-C--eEEEEEcCC--------------C-C--E
Confidence            3566678899999999999988876556 679999888766543211 1  122221100              0 1  4


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      +++-.-.++.|.||++++|..+..+....
T Consensus        73 ~~~~~~~d~~v~iWd~~~~~~~~~~~~~~  101 (355)
T 3vu4_A           73 VAFVTGVKEVVHIWDDVKKQDVSRIKVDA  101 (355)
T ss_dssp             EEEECSSTTEEEEEETTTTEEEEEEECSS
T ss_pred             EEEEECCccEEEEEECCCCcEEEEEECCC
Confidence            55666777899999999999888777544

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=96.57  E-value=0.016  Score=51.57  Aligned_cols=88  Identities=18%  Similarity=0.194  Sum_probs=66.3

Q ss_pred             ccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCC-----ceeEEeecccccceeeEEEEEecccccccccccCCC
Q 021797          155 TCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQA-----LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~-----~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      ..|.-+...+.+|+.+|++ ++++++...|.|.|+|+..     +..++.++|+.+    .+....-.            
T Consensus        11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~----~v~~~~~s------------   74 (319)
T 3frx_A           11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH----IVQDCTLT------------   74 (319)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS----CEEEEEEC------------
T ss_pred             EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc----cEEEEEEC------------
Confidence            3477788889999999965 8999999999999999864     567889999987    33322111            


Q ss_pred             CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       229 k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       ++..  +++-+..+|.|.||++++|..+..+.
T Consensus        75 -~dg~--~l~s~s~D~~v~~wd~~~~~~~~~~~  104 (319)
T 3frx_A           75 -ADGA--YALSASWDKTLRLWDVATGETYQRFV  104 (319)
T ss_dssp             -TTSS--EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             -CCCC--EEEEEeCCCEEEEEECCCCCeeEEEc
Confidence             0111  44667889999999999998776665

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=96.57  E-value=0.031  Score=48.54  Aligned_cols=95  Identities=9%  Similarity=0.034  Sum_probs=60.1

Q ss_pred             cccCCCceeeEE------EECCCCCEEEEEcCCCcEEEEEcCCce-eEEeecccccceeeEEEEEecccccccccccCCC
Q 021797          156 CLKDHPRKGERL------TLSPSGSLAAITDSLGRILLLDTQALV-VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       156 ~l~D~~R~~~~I------~lsP~~~lAavtDslGRV~LiD~~~~~-ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      .+......+..+      +.+|++++++++...|.|.++|+.++. .++.++......-..+....-..      ...  
T Consensus       106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~--  177 (357)
T 3i2n_A          106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGN------AYN--  177 (357)
T ss_dssp             EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEEC------CCC--
T ss_pred             EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEe------ccC--
Confidence            355556667777      568999999999999999999999987 78888765542211111111000      000  


Q ss_pred             CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       229 k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       ++..  +++.+-.+|.|.+|+++++..+....
T Consensus       178 -~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~  207 (357)
T 3i2n_A          178 -QEER--VVCAGYDNGDIKLFDLRNMALRWETN  207 (357)
T ss_dssp             --CCC--EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             -CCCC--EEEEEccCCeEEEEECccCceeeecC
Confidence             0111  44556678999999999887655443

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=96.56  E-value=0.014  Score=57.62  Aligned_cols=81  Identities=6%  Similarity=0.011  Sum_probs=60.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.-....+..++.+|+++++|+++..|.|.++|+.++..++.++|+.+.    +....-.             ++..  +
T Consensus        51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s-------------~~~~--~  111 (814)
T 3mkq_A           51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVH-------------PTKP--Y  111 (814)
T ss_dssp             EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEEC-------------SSSS--E
T ss_pred             EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC----EEEEEEe-------------CCCC--E
Confidence            3344556889999999999999988999999999999999999998773    2221110             0111  2


Q ss_pred             EEEcCCCCeEEEeecCCCCe
Q 021797          237 AIHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~R  256 (307)
                      ++.+-.+|.|.||+++++..
T Consensus       112 l~~~~~dg~i~vw~~~~~~~  131 (814)
T 3mkq_A          112 VLSGSDDLTVKLWNWENNWA  131 (814)
T ss_dssp             EEEEETTSEEEEEEGGGTSE
T ss_pred             EEEEcCCCEEEEEECCCCce
Confidence            34566799999999998733

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=96.56  E-value=0.0078  Score=52.37  Aligned_cols=90  Identities=14%  Similarity=0.088  Sum_probs=64.8

Q ss_pred             CCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCc------eeEEeecccccce-----eeEEEEEecccccccccccC
Q 021797          159 DHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQAL------VVVRLWKGYRDAS-----CVFMEMLVNKDAATSSAYYA  226 (307)
Q Consensus       159 D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~------~ivRmWKGyRDAq-----c~Wi~~~~~~~~~~~~~~~~  226 (307)
                      .....+.+|+.+| ++++++++...|+|.|+|....      ..++.++++++-.     .+.+....-.          
T Consensus       191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----------  260 (342)
T 1yfq_A          191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS----------  260 (342)
T ss_dssp             SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC----------
T ss_pred             CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc----------
Confidence            3455688999999 9999999999999999999887      8888999887621     1223221110          


Q ss_pred             CCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          227 PVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       227 ~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      +   +..  +++-+-.+|.|.||++++|.++..+...
T Consensus       261 ~---~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~  292 (342)
T 1yfq_A          261 P---RHK--FLYTAGSDGIISCWNLQTRKKIKNFAKF  292 (342)
T ss_dssp             T---TTC--CEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred             C---CCC--EEEEecCCceEEEEcCccHhHhhhhhcc
Confidence            0   111  2345667999999999999988877643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=96.55  E-value=0.024  Score=51.34  Aligned_cols=80  Identities=16%  Similarity=0.139  Sum_probs=58.3

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE-----eecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR-----LWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR-----mWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      ....++.+|+++++++....|.|.++|+.++..++     .++|+..    ++....-..             +.  .++
T Consensus       124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~----~v~~~~~~~-------------~~--~~~  184 (433)
T 3bws_A          124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG----FVETISIPE-------------HN--ELW  184 (433)
T ss_dssp             CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC----EEEEEEEGG-------------GT--EEE
T ss_pred             CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC----ceeEEEEcC-------------CC--EEE
Confidence            34578999988888888888999999999999998     4556554    333221110             11  244


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +-...+|.|.+|+++++..+..+.
T Consensus       185 ~s~~~d~~v~~~d~~~~~~~~~~~  208 (433)
T 3bws_A          185 VSQMQANAVHVFDLKTLAYKATVD  208 (433)
T ss_dssp             EEEGGGTEEEEEETTTCCEEEEEE
T ss_pred             EEECCCCEEEEEECCCceEEEEEc
Confidence            566678999999999988887776

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=96.54  E-value=0.13  Score=43.65  Aligned_cols=86  Identities=17%  Similarity=0.172  Sum_probs=61.7

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +......+..++..| ++++++++...|.|.++|  .+..++.+++.....+.-+.....                .  .
T Consensus       138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~----------------~--~  197 (313)
T 3odt_A          138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDD----------------G--H  197 (313)
T ss_dssp             EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEET----------------T--E
T ss_pred             cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCC----------------C--e
Confidence            455566778888888 899999999999999999  667778888743333332322111                1  1


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                       ++.+-.+|.|.||+++++..+..+...
T Consensus       198 -~~~~~~dg~i~i~d~~~~~~~~~~~~~  224 (313)
T 3odt_A          198 -FISCSNDGLIKLVDMHTGDVLRTYEGH  224 (313)
T ss_dssp             -EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             -EEEccCCCeEEEEECCchhhhhhhhcC
Confidence             345677999999999999988887643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=96.54  E-value=0.027  Score=51.09  Aligned_cols=87  Identities=9%  Similarity=-0.072  Sum_probs=62.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+..++.+|+++++++....|+|.++|+.++..++.+++.... ...+....+.               .  .|
T Consensus       165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------~--~l  226 (433)
T 3bws_A          165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW-SKILLYDPIR---------------D--LV  226 (433)
T ss_dssp             HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS-EEEEEEETTT---------------T--EE
T ss_pred             ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC-eeEEEEcCCC---------------C--EE
Confidence            4455667888999999999999988999999999999999998865442 2222221110               1  34


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-....|.|.+|++++|..+..+.
T Consensus       227 ~~~~~~~~~i~~~d~~~~~~~~~~~  251 (433)
T 3bws_A          227 YCSNWISEDISVIDRKTKLEIRKTD  251 (433)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEECC
T ss_pred             EEEecCCCcEEEEECCCCcEEEEec
Confidence            3445568899999998877665544

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=96.54  E-value=0.017  Score=54.45  Aligned_cols=84  Identities=17%  Similarity=0.213  Sum_probs=62.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+..++.+|+++++|++...|.|.|+|. ++..++.++|+.+. +.-+... +               +..  +
T Consensus       463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~-v~~l~~s-~---------------dg~--~  522 (577)
T 2ymu_A          463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS-VRGVAFS-P---------------DGQ--T  522 (577)
T ss_dssp             EECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSC-EEEEEEC-T---------------TSS--C
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCC-EEEEEEc-C---------------CCC--E
Confidence            5556677889999999999999999999999995 78889999998763 1111111 0               111  2


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+-.+|.|.||+. +|+++..+.
T Consensus       523 l~s~~~dg~v~lwd~-~~~~~~~~~  546 (577)
T 2ymu_A          523 IASASDDKTVKLWNR-NGQLLQTLT  546 (577)
T ss_dssp             EEEEETTSEEEEECT-TSCEEEEEE
T ss_pred             EEEEECcCEEEEEeC-CCCEEEEEc
Confidence            345778999999995 688877665

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=96.51  E-value=0.012  Score=51.26  Aligned_cols=88  Identities=16%  Similarity=0.114  Sum_probs=63.0

Q ss_pred             CCceeeEEEECCC---CCEEEEEcCCCcEEEEEcCCce-eEEeeccccccee--eEEEEEecccccccccccCCCCCCcc
Q 021797          160 HPRKGERLTLSPS---GSLAAITDSLGRILLLDTQALV-VVRLWKGYRDASC--VFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       160 ~~R~~~~I~lsP~---~~lAavtDslGRV~LiD~~~~~-ivRmWKGyRDAqc--~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      ....+.+++.+|+   |+++++....|.|.++|+.++. .++.++|+.+.-.  .|+....-          .   ++..
T Consensus        64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------s---~~~~  130 (357)
T 3i2n_A           64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGI----------G---EGAP  130 (357)
T ss_dssp             ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGC----------C----CCC
T ss_pred             ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecccccc----------C---CCcc
Confidence            3556788999998   7999999999999999999998 8999999887321  22210000          0   0111


Q ss_pred             eEEEEEcCCCCeEEEeecCCCC-eEEEEEe
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGP-RLLTIQC  262 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~-RV~a~~v  262 (307)
                        +++.+-.+|.|.||+++++. .+..+..
T Consensus       131 --~l~~~~~d~~i~vwd~~~~~~~~~~~~~  158 (357)
T 3i2n_A          131 --EIVTGSRDGTVKVWDPRQKDDPVANMEP  158 (357)
T ss_dssp             --EEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred             --EEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence              34667789999999999987 5666654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=96.49  E-value=0.059  Score=46.32  Aligned_cols=79  Identities=19%  Similarity=0.162  Sum_probs=53.3

Q ss_pred             eeEEEECCCCCEEEEEc------------CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          164 GERLTLSPSGSLAAITD------------SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtD------------slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      ...++++|+|+++++++            ..++|.++|+.++.+++..+.-..  ..-+... + +            . 
T Consensus        84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~~~s-~-d------------g-  146 (337)
T 1pby_B           84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--ITMLAWA-R-D------------G-  146 (337)
T ss_dssp             TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--CCCEEEC-T-T------------S-
T ss_pred             ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC--cceeEEC-C-C------------C-
Confidence            44689999998888875            469999999999999887764221  1111111 0 1            1 


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ..++..     .+.|.+|++.+|..+..+..+.
T Consensus       147 ~~l~~~-----~~~i~~~d~~~~~~~~~~~~~~  174 (337)
T 1pby_B          147 SKLYGL-----GRDLHVMDPEAGTLVEDKPIQS  174 (337)
T ss_dssp             SCEEEE-----SSSEEEEETTTTEEEEEECSTT
T ss_pred             CEEEEe-----CCeEEEEECCCCcEeeeeeccc
Confidence            122222     6889999999998887776554

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=96.47  E-value=0.026  Score=53.16  Aligned_cols=87  Identities=14%  Similarity=0.158  Sum_probs=66.3

Q ss_pred             ccCCCc---eeeEEEECCC-CCEEEEEcCCCcEEEEEcCCceeEEee-c---ccccceeeEEEEEecccccccccccCCC
Q 021797          157 LKDHPR---KGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLW-K---GYRDASCVFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       157 l~D~~R---~~~~I~lsP~-~~lAavtDslGRV~LiD~~~~~ivRmW-K---GyRDAqc~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      +.....   .+.+++.+|+ ++++++....|.|.++|+.++..++.+ +   ++.+. +.-+... +             
T Consensus       199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~-------------  263 (615)
T 1pgu_A          199 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG-IFALSWL-D-------------  263 (615)
T ss_dssp             ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC-EEEEEES-S-------------
T ss_pred             ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc-eEEEEEc-C-------------
Confidence            444555   7899999999 999999999999999999999999998 5   66552 1112111 1             


Q ss_pred             CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       229 k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                         ..  +++-+-.+|.|.||+++++..+..+...
T Consensus       264 ---~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~  293 (615)
T 1pgu_A          264 ---SQ--KFATVGADATIRVWDVTTSKCVQKWTLD  293 (615)
T ss_dssp             ---SS--EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             ---CC--EEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence               11  3455667899999999999999988866

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=96.46  E-value=0.066  Score=47.89  Aligned_cols=88  Identities=14%  Similarity=0.139  Sum_probs=62.8

Q ss_pred             ccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCceeEEeec--ccccceeeEEEEEecccccccccccCCCCCC
Q 021797          155 TCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWK--GYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmWK--GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      ..+......+.+++.+|++ +++|+....|.|.|+|+.++......+  |+.+.    |....-.          +  .+
T Consensus        67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~----v~~~~~~----------~--~~  130 (383)
T 3ei3_B           67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDA----ITGMKFN----------Q--FN  130 (383)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCB----EEEEEEE----------T--TE
T ss_pred             EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCc----eeEEEeC----------C--CC
Confidence            3466778889999999999 999999999999999999998888876  56552    2211100          0  01


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      .  -+++.+-.+|.|.||+++. ..+..+.
T Consensus       131 ~--~~l~s~~~d~~i~iwd~~~-~~~~~~~  157 (383)
T 3ei3_B          131 T--NQLFVSSIRGATTLRDFSG-SVIQVFA  157 (383)
T ss_dssp             E--EEEEEEETTTEEEEEETTS-CEEEEEE
T ss_pred             C--CEEEEEeCCCEEEEEECCC-CceEEEe
Confidence            1  2456677899999999984 5544443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=96.44  E-value=0.013  Score=52.39  Aligned_cols=76  Identities=7%  Similarity=-0.005  Sum_probs=56.2

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeE-Eeecc-cccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV-RLWKG-YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~iv-RmWKG-yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ..+.+++.+|+|+++|+....|.|.|+|+.++..+ ..+++ +.+    .|....-.             ++.. +|+.-
T Consensus       171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~----~v~~l~fs-------------~~g~-~l~s~  232 (343)
T 3lrv_A          171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA----KIKEVKFA-------------DNGY-WMVVE  232 (343)
T ss_dssp             CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS----CEEEEEEC-------------TTSS-EEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC----CEEEEEEe-------------CCCC-EEEEE
Confidence            34789999999999999999999999999999988 88888 664    33322111             0111 44444


Q ss_pred             cCCCCeEEEeecCCCCeE
Q 021797          240 APRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV  257 (307)
                      .  .+.|.||+++++..+
T Consensus       233 ~--~~~v~iwd~~~~~~~  248 (343)
T 3lrv_A          233 C--DQTVVCFDLRKDVGT  248 (343)
T ss_dssp             E--SSBEEEEETTSSTTC
T ss_pred             e--CCeEEEEEcCCCCcc
Confidence            4  569999999998765

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=96.41  E-value=0.043  Score=48.47  Aligned_cols=86  Identities=14%  Similarity=0.147  Sum_probs=61.8

Q ss_pred             CCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          159 DHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       159 D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....+.+++.+| ++++++++...|.|.++|+.++..++..+.-..  +.-+.....             ..+.  .++
T Consensus        97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~-------------~~~~--~~~  159 (408)
T 4a11_B           97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET--VYSHHMSPV-------------STKH--CLV  159 (408)
T ss_dssp             CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC--EEEEEECSS-------------CSSC--CEE
T ss_pred             cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc--eeeeEeecC-------------CCCC--cEE
Confidence            3466788999999 778999999999999999999999988863222  111111110             0111  255


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +.+..+|.|.||+++++..+..+.
T Consensus       160 ~~~~~~~~v~~~d~~~~~~~~~~~  183 (408)
T 4a11_B          160 AVGTRGPKVQLCDLKSGSCSHILQ  183 (408)
T ss_dssp             EEEESSSSEEEEESSSSCCCEEEC
T ss_pred             EEEcCCCeEEEEeCCCcceeeeec
Confidence            677889999999999998777665

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=96.41  E-value=0.012  Score=53.59  Aligned_cols=82  Identities=10%  Similarity=0.008  Sum_probs=60.1

Q ss_pred             CCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          159 DHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       159 D~~R~~~~I~lsP~-~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....+.+|+.+|+ ++++|+.+..|.|.|+|+.++..++.++|+.+.    |....-.          |.. ..   ++
T Consensus       224 ~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~----v~~l~~s----------p~~-~~---~l  285 (357)
T 4g56_B          224 ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN----ITGLAYS----------YHS-SP---FL  285 (357)
T ss_dssp             TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC----EEEEEEC----------SSS-SC---CE
T ss_pred             cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee----EEEEEEc----------CCC-CC---EE
Confidence            34455788999996 578999999999999999999999999998873    3222110          000 01   33


Q ss_pred             EEcCCCCeEEEeecCCCCeEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLL  258 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~  258 (307)
                      +-+-.+|.|.||++++|+.+.
T Consensus       286 asgs~D~~i~iwd~~~~~~~~  306 (357)
T 4g56_B          286 ASISEDCTVAVLDADFSEVFR  306 (357)
T ss_dssp             EEEETTSCEEEECTTSCEEEE
T ss_pred             EEEeCCCEEEEEECCCCcEeE
Confidence            456789999999999886554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=96.37  E-value=0.15  Score=45.41  Aligned_cols=123  Identities=11%  Similarity=0.128  Sum_probs=64.7

Q ss_pred             eeEEEECCCCCEEEEEc-CCCcEEEEEcCCceeEEee--cccccc--eeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          164 GERLTLSPSGSLAAITD-SLGRILLLDTQALVVVRLW--KGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtD-slGRV~LiD~~~~~ivRmW--KGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      ...++++|+|+++++++ ..++|.++|+.++.+..+-  ......  ...-+..             +   ++.. +|++
T Consensus       213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~-------------s---pdg~-~l~v  275 (361)
T 3scy_A          213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL-------------S---PDGK-YLYA  275 (361)
T ss_dssp             EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE-------------C---TTSS-EEEE
T ss_pred             CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE-------------C---CCCC-EEEE
Confidence            45799999999877776 6899999999877543221  111110  0001110             0   1111 3444


Q ss_pred             EcCC-CCeEEEeecC--CCC--eEEEEEecC--CeEEeccCcccccccCCCCCcccEEEEEeCCCCceEEEec
Q 021797          239 HAPR-KGIIEVWQMR--TGP--RLLTIQCAK--GSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNR  304 (307)
Q Consensus       239 yapr-Rg~lEVW~~~--~G~--RV~a~~v~~--~~~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~~in~  304 (307)
                      -... .+.|.||++.  +|.  .+..+..+.  .+.-+.+..+++-. ..+.-....++-+|+.+|.|..+..
T Consensus       276 ~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~-~~~~~~~v~v~~~d~~~g~~~~~~~  347 (361)
T 3scy_A          276 SNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLV-ACRDTNVIQIFERDQATGLLTDIKK  347 (361)
T ss_dssp             EECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEE-EETTTTEEEEEEECTTTCCEEECSC
T ss_pred             ECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEE-EECCCCCEEEEEEECCCCcEeecce
Confidence            4444 5789999995  455  444444321  12222332221111 0011123455668999999988753

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=96.36  E-value=0.017  Score=53.29  Aligned_cols=38  Identities=11%  Similarity=0.024  Sum_probs=35.1

Q ss_pred             EECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc
Q 021797          168 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA  205 (307)
Q Consensus       168 ~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA  205 (307)
                      +++|+|+++++.+..|.|.++|+.++..++.++|+.+.
T Consensus       124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~  161 (445)
T 2ovr_B          124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG  161 (445)
T ss_dssp             EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSC
T ss_pred             EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC
Confidence            67888999999999999999999999999999999874

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=96.36  E-value=0.026  Score=52.16  Aligned_cols=75  Identities=20%  Similarity=0.219  Sum_probs=57.3

Q ss_pred             EEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeE
Q 021797          167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGII  246 (307)
Q Consensus       167 I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~l  246 (307)
                      .+++++++++++....|.|.++|+.++..++..+|+.+.    |....- +              ..  +++-+-.+|.|
T Consensus       137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~-~--------------~~--~l~sg~~dg~i  195 (435)
T 1p22_A          137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS----VLCLQY-D--------------ER--VIITGSSDSTV  195 (435)
T ss_dssp             EEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSC----EEEEEC-C--------------SS--EEEEEETTSCE
T ss_pred             EEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE-C--------------CC--EEEEEcCCCeE
Confidence            466779999999999999999999999999999998873    322211 1              01  44566778999


Q ss_pred             EEeecCCCCeEEEEEe
Q 021797          247 EVWQMRTGPRLLTIQC  262 (307)
Q Consensus       247 EVW~~~~G~RV~a~~v  262 (307)
                      .||++.+|..+..+..
T Consensus       196 ~vwd~~~~~~~~~~~~  211 (435)
T 1p22_A          196 RVWDVNTGEMLNTLIH  211 (435)
T ss_dssp             EEEESSSCCEEEEECC
T ss_pred             EEEECCCCcEEEEEcC
Confidence            9999988887776653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=96.36  E-value=0.03  Score=49.19  Aligned_cols=82  Identities=12%  Similarity=0.112  Sum_probs=59.5

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCC--ceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA--LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~--~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +.-+...+.+++.+|+|+++|++...|.|.|+|+..  +..++.++|+.+.    |....-..          .+ +.. 
T Consensus         5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~----V~~v~~s~----------~~-~g~-   68 (297)
T 2pm7_B            5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAH----------PK-FGT-   68 (297)
T ss_dssp             CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSC----EEEEEECC----------GG-GCS-
T ss_pred             ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCC----eEEEEecC----------CC-cCC-
Confidence            444567789999999999999999999999999974  4778899999873    32211000          00 011 


Q ss_pred             EEEEEcCCCCeEEEeecCCCC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~  255 (307)
                       +++-+..+|.|.||++++|.
T Consensus        69 -~l~s~s~D~~v~iWd~~~~~   88 (297)
T 2pm7_B           69 -ILASCSYDGKVMIWKEENGR   88 (297)
T ss_dssp             -EEEEEETTTEEEEEEBSSSC
T ss_pred             -EEEEEcCCCEEEEEEcCCCc
Confidence             45667789999999998773

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=96.35  E-value=0.029  Score=50.15  Aligned_cols=84  Identities=14%  Similarity=0.170  Sum_probs=60.7

Q ss_pred             CceeeEEEECCCC-CEEEEEcCCC---cEEEEEcCCc-eeEEeec-ccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          161 PRKGERLTLSPSG-SLAAITDSLG---RILLLDTQAL-VVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       161 ~R~~~~I~lsP~~-~lAavtDslG---RV~LiD~~~~-~ivRmWK-GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      ...+.+++.+|++ ++++++...|   .|.++|+.++ ..++.++ |+..    .+....-.          +.  +.. 
T Consensus       214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~----~v~~~~~s----------~~--~~~-  276 (416)
T 2pm9_A          214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK----GILSLDWC----------HQ--DEH-  276 (416)
T ss_dssp             CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS----CEEEEEEC----------SS--CSS-
T ss_pred             CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC----ceeEEEeC----------CC--CCC-
Confidence            5668899999987 6788877777   9999999997 7888888 7765    23221110          00  111 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                       +++-+-.+|.|.||+++++..+..+..
T Consensus       277 -~l~s~~~dg~v~~wd~~~~~~~~~~~~  303 (416)
T 2pm9_A          277 -LLLSSGRDNTVLLWNPESAEQLSQFPA  303 (416)
T ss_dssp             -CEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred             -eEEEEeCCCCEEEeeCCCCccceeecC
Confidence             345566799999999999999888873

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=96.32  E-value=0.013  Score=52.03  Aligned_cols=77  Identities=14%  Similarity=0.025  Sum_probs=53.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce---eEEeecc-cccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV---VVRLWKG-YRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~---ivRmWKG-yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +......+..++.+|+++++++....|.|.++|+.++.   +++.+++ +.+ .+.-+....                +.
T Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~~----------------~~  158 (377)
T 3dwl_C           96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-TILSLDWHP----------------NN  158 (377)
T ss_dssp             CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-CEEEEEECT----------------TS
T ss_pred             ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-CeEEEEEcC----------------CC
Confidence            55667789999999999999999999999999999988   5777877 654 222222111                11


Q ss_pred             ceEEEEEcCCCCeEEEeecC
Q 021797          233 CLCLAIHAPRKGIIEVWQMR  252 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~  252 (307)
                      .  +++.+-.+|.|.||+++
T Consensus       159 ~--~l~~~~~d~~i~iwd~~  176 (377)
T 3dwl_C          159 V--LLAAGCADRKAYVLSAY  176 (377)
T ss_dssp             S--EEEEEESSSCEEEEEEC
T ss_pred             C--EEEEEeCCCEEEEEEEE
Confidence            1  44667778999999984

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=96.32  E-value=0.028  Score=49.07  Aligned_cols=84  Identities=14%  Similarity=0.143  Sum_probs=59.3

Q ss_pred             ccCCCceeeEEEECCC--CCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPS--GSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~--~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +..+...+.+++.+|+  ++++++++..|.|.++|+.++.  .++..+++.+.    +....-.          +... .
T Consensus        51 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~----------~~~~-~  115 (379)
T 3jrp_A           51 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSAS----VNSVQWA----------PHEY-G  115 (379)
T ss_dssp             ECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEEC----------CGGG-C
T ss_pred             ecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcc----eEEEEeC----------CCCC-C
Confidence            4455677889999987  9999999999999999999997  77777776552    2211110          0000 1


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV  257 (307)
                        -+++.+-.+|.|.||+++++...
T Consensus       116 --~~l~~~~~d~~i~v~d~~~~~~~  138 (379)
T 3jrp_A          116 --PLLLVASSDGKVSVVEFKENGTT  138 (379)
T ss_dssp             --SEEEEEETTSEEEEEECCTTSCC
T ss_pred             --CEEEEecCCCcEEEEecCCCCce
Confidence              14566778999999999988443

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=96.31  E-value=0.015  Score=53.58  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=60.0

Q ss_pred             EEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCe
Q 021797          166 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGI  245 (307)
Q Consensus       166 ~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~  245 (307)
                      ..+++|+++++++....|.|.++|+.++..++.++|+.+.    +....-.             ++..  +++-+-.+|.
T Consensus       273 v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~-------------~~~~--~l~sg~~dg~  333 (464)
T 3v7d_B          273 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR----IYSTIYD-------------HERK--RCISASMDTT  333 (464)
T ss_dssp             EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEEE-------------TTTT--EEEEEETTSC
T ss_pred             EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC----EEEEEEc-------------CCCC--EEEEEeCCCc
Confidence            4456899999999999999999999999999999998773    3221110             0111  3456678999


Q ss_pred             EEEeecCCCCeEEEEEec
Q 021797          246 IEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       246 lEVW~~~~G~RV~a~~v~  263 (307)
                      |.||++++|..+..+...
T Consensus       334 i~vwd~~~~~~~~~~~~h  351 (464)
T 3v7d_B          334 IRIWDLENGELMYTLQGH  351 (464)
T ss_dssp             EEEEETTTTEEEEEECCC
T ss_pred             EEEEECCCCcEEEEEeCC
Confidence            999999999998887643

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.31  E-value=0.021  Score=51.12  Aligned_cols=81  Identities=9%  Similarity=0.164  Sum_probs=56.3

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCC----ceeEEeecccccceeeEEEEEecccccccccccCCCCC
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA----LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~----~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      ..|..+...+.+++.+|+|+++|++...|.|.|+|+..    ...++..+|+.+    .+....-.             +
T Consensus       101 ~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~----~v~~v~~~-------------p  163 (330)
T 2hes_X          101 AIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ----DVKHVIWH-------------P  163 (330)
T ss_dssp             EEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS----CEEEEEEC-------------S
T ss_pred             EEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC----ceEEEEEC-------------C
Confidence            44667778899999999999999999999999999942    357788888876    23221110             0


Q ss_pred             CcceEEEEEcCCCCeEEEeecCCC
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRTG  254 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~G  254 (307)
                      +..  +++-+..+|.|.||+++++
T Consensus       164 ~~~--~l~s~s~D~~i~iW~~~~~  185 (330)
T 2hes_X          164 SEA--LLASSSYDDTVRIWKDYDD  185 (330)
T ss_dssp             SSS--EEEEEETTSCEEEEEEETT
T ss_pred             CCC--EEEEEcCCCeEEEEECCCC
Confidence            111  4566788999999998765

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=96.28  E-value=0.011  Score=53.92  Aligned_cols=79  Identities=16%  Similarity=0.099  Sum_probs=56.1

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      +.+++.+|+|+++++....|.|.++|+.++..++..+....+.-++|....-.             ++..  +++-+..+
T Consensus       301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s-------------~dg~--~l~sgs~D  365 (380)
T 3iz6_a          301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS-------------SDGS--ALCTGSWD  365 (380)
T ss_dssp             CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC-------------SSSS--EEEEECTT
T ss_pred             eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEEC-------------CCCC--EEEEeeCC
Confidence            57899999999999999999999999999998877633322222233222110             1111  45678889


Q ss_pred             CeEEEeecCCCCeE
Q 021797          244 GIIEVWQMRTGPRL  257 (307)
Q Consensus       244 g~lEVW~~~~G~RV  257 (307)
                      |.|.||++..++++
T Consensus       366 ~~i~iW~~~~~~~i  379 (380)
T 3iz6_a          366 KNLKIWAFSGHRKI  379 (380)
T ss_dssp             SCEEEEECCSSSSC
T ss_pred             CCEEEEecCCCccc
Confidence            99999999877654

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=96.28  E-value=0.022  Score=50.67  Aligned_cols=82  Identities=10%  Similarity=0.038  Sum_probs=56.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +..+...+.+++.+|+|+++|++...|.|.|+|+.++.  .++.++|+.+    .|....-..          . .+.. 
T Consensus         9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~----~V~~v~~~~----------~-~~~~-   72 (316)
T 3bg1_A            9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG----PVWQVAWAH----------P-MYGN-   72 (316)
T ss_dssp             -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS----CEEEEEECC----------G-GGSS-
T ss_pred             cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc----cEEEEEeCC----------C-CCCC-
Confidence            45567788999999999999999999999999998874  5778899887    332221100          0 0001 


Q ss_pred             EEEEEcCCCCeEEEeecCCCC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~  255 (307)
                       +++-+..+|.|.||++++|.
T Consensus        73 -~l~s~s~D~~v~iWd~~~~~   92 (316)
T 3bg1_A           73 -ILASCSYDRKVIIWREENGT   92 (316)
T ss_dssp             -CEEEEETTSCEEEECCSSSC
T ss_pred             -EEEEEECCCEEEEEECCCCc
Confidence             34567789999999998874

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=96.26  E-value=0.014  Score=51.91  Aligned_cols=80  Identities=11%  Similarity=-0.022  Sum_probs=56.4

Q ss_pred             ccC-CCceeeEEEECCCCCEEEEEcCCCcEEEEEcC------------------CceeEEeecccccceeeEEEEEeccc
Q 021797          157 LKD-HPRKGERLTLSPSGSLAAITDSLGRILLLDTQ------------------ALVVVRLWKGYRDASCVFMEMLVNKD  217 (307)
Q Consensus       157 l~D-~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~------------------~~~ivRmWKGyRDAqc~Wi~~~~~~~  217 (307)
                      +.. ....+.+|+.+|+++++++....|.|.++|+.                  .+..++.+ ++.+    ++....-. 
T Consensus       141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~v~~~~~s-  214 (377)
T 3dwl_C          141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG----WVHAVGFS-  214 (377)
T ss_dssp             ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS----SEEEEEEC-
T ss_pred             eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc----eEEEEEEC-
Confidence            444 57789999999999999999889999999995                  46666666 6655    23221110 


Q ss_pred             ccccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCe
Q 021797          218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       218 ~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~R  256 (307)
                                  ++..  +++.+-.+|.|.||+++++..
T Consensus       215 ------------p~~~--~l~~~~~d~~i~iwd~~~~~~  239 (377)
T 3dwl_C          215 ------------PSGN--ALAYAGHDSSVTIAYPSAPEQ  239 (377)
T ss_dssp             ------------TTSS--CEEEEETTTEEC-CEECSTTS
T ss_pred             ------------CCCC--EEEEEeCCCcEEEEECCCCCC
Confidence                        0111  345677899999999999876

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=96.26  E-value=0.059  Score=56.32  Aligned_cols=82  Identities=16%  Similarity=0.128  Sum_probs=60.5

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      -....+.+|+.+|+++++|+....|.|.|+|..++..+...++  ...+.-+...             +   ..   +++
T Consensus        15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~--~~~V~~l~fs-------------p---g~---~L~   73 (902)
T 2oaj_A           15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLED--RSAIKEMRFV-------------K---GI---YLV   73 (902)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSS--CCCEEEEEEE-------------T---TT---EEE
T ss_pred             CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCC--CCCEEEEEEc-------------C---CC---EEE
Confidence            3456789999999999999999999999999999887766553  2222222211             1   11   345


Q ss_pred             EcCCCCeEEEeecCCCCeEEEEE
Q 021797          239 HAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      -+-.+|.|.||++++|..+..+.
T Consensus        74 S~s~D~~v~lWd~~~~~~~~~~~   96 (902)
T 2oaj_A           74 VINAKDTVYVLSLYSQKVLTTVF   96 (902)
T ss_dssp             EEETTCEEEEEETTTCSEEEEEE
T ss_pred             EEECcCeEEEEECCCCcEEEEEc
Confidence            56789999999999999887775

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.18  E-value=0.039  Score=49.30  Aligned_cols=82  Identities=12%  Similarity=0.133  Sum_probs=59.3

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc--eeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~--~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      ..+......+.+|+.+|+++++|++...|.|.|+|+.++  ..++.++|+.+    +|....-.          +.. ..
T Consensus       147 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~----~v~~~~~~----------~~~-~~  211 (330)
T 2hes_X          147 SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG----TVWSSDFD----------KTE-GV  211 (330)
T ss_dssp             EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS----CEEEEEEC----------CSS-SS
T ss_pred             EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC----cEEEEEec----------CCC-Ce
Confidence            335666777999999999999999999999999999876  67888999887    34322110          000 01


Q ss_pred             ceEEEEEcCCCCeEEEeecCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~  253 (307)
                        .+++-+..+|.|.||+++.
T Consensus       212 --~~l~s~s~D~~v~iw~~~~  230 (330)
T 2hes_X          212 --FRLCSGSDDSTVRVWKYMG  230 (330)
T ss_dssp             --CEEEEEETTSCEEEEEEEE
T ss_pred             --eEEEEEeCCCeEEEEEecC
Confidence              2445677889999998754

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.14  E-value=0.096  Score=48.16  Aligned_cols=93  Identities=12%  Similarity=0.095  Sum_probs=65.1

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce----eEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV----VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~----ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +.........+..+|+++++++..+.|.|.++|+.++.    .++...++..+-.+-..  ..              .+.
T Consensus       226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~--~p--------------~~~  289 (420)
T 4gga_A          226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW--CP--------------WQS  289 (420)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE--CT--------------TCT
T ss_pred             ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee--CC--------------Ccc
Confidence            56667778899999999999999999999999998875    34455555543211110  00              011


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      .++.+.-.-.+|.|.||++++|..+..+.....
T Consensus       290 ~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~  322 (420)
T 4gga_A          290 NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ  322 (420)
T ss_dssp             TEEEEEECTTTCEEEEEETTTTEEEEEEECSSC
T ss_pred             cEEEEEeecCCCEEEEEeCCccccceeeccccc
Confidence            223334456789999999999999888876544

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=96.13  E-value=0.068  Score=46.14  Aligned_cols=84  Identities=17%  Similarity=0.184  Sum_probs=62.7

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      ..|......+.+++.+|+|+++++....|.|.++|..........+...+........  .               ... 
T Consensus        80 ~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~-  141 (340)
T 4aow_A           80 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS--S---------------DNR-  141 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC--T---------------TSS-
T ss_pred             EEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEe--e---------------cCc-
Confidence            3355567788999999999999999999999999999999998888777644433221  0               011 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV  257 (307)
                       +++-+..+|.+.+|+++...+.
T Consensus       142 -~l~s~s~d~~~~~~d~~~~~~~  163 (340)
T 4aow_A          142 -QIVSGSRDKTIKLWNTLGVCKY  163 (340)
T ss_dssp             -CEEEEETTSCEEEECTTSCEEE
T ss_pred             -cceeecCCCeEEEEEeCCCceE
Confidence             3356778899999998765544

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=96.13  E-value=0.021  Score=56.53  Aligned_cols=78  Identities=24%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +..+...+.+++++|+|+++++....|.|.|+|+.++..++.++|+.+.    |....-.             ++..  +
T Consensus       426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~----v~~~~~s-------------~~~~--~  486 (694)
T 3dm0_A          426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD----VLSVAFS-------------LDNR--Q  486 (694)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEC-------------TTSS--C
T ss_pred             ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC----EEEEEEe-------------CCCC--E
Confidence            4556667889999999999999999999999999999999999999873    2221110             0111  3


Q ss_pred             EEEcCCCCeEEEeecCC
Q 021797          237 AIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~  253 (307)
                      ++-+..+|.|.||++..
T Consensus       487 l~s~s~D~~i~iwd~~~  503 (694)
T 3dm0_A          487 IVSASRDRTIKLWNTLG  503 (694)
T ss_dssp             EEEEETTSCEEEECTTS
T ss_pred             EEEEeCCCEEEEEECCC
Confidence            46678899999999854

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=96.11  E-value=0.035  Score=54.41  Aligned_cols=86  Identities=12%  Similarity=0.140  Sum_probs=66.3

Q ss_pred             cccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          156 CLKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~-lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      .|..+.+.+.+++.+|++. ++|+....|.|.|+|..++..++.++|+.+    +|....-.             ++.. 
T Consensus       142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~----~V~~v~fs-------------pdg~-  203 (611)
T 1nr0_A          142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK----FVHSVRYN-------------PDGS-  203 (611)
T ss_dssp             CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS----CEEEEEEC-------------TTSS-
T ss_pred             eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC----ceEEEEEC-------------CCCC-
Confidence            3666778899999999986 577788889999999999999999999988    55433211             1111 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                       +++-+..+|.|.||++++|..+..+
T Consensus       204 -~las~s~D~~i~lwd~~~g~~~~~~  228 (611)
T 1nr0_A          204 -LFASTGGDGTIVLYNGVDGTKTGVF  228 (611)
T ss_dssp             -EEEEEETTSCEEEEETTTCCEEEEC
T ss_pred             -EEEEEECCCcEEEEECCCCcEeeee
Confidence             4567788999999999887766555

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=96.10  E-value=0.029  Score=55.53  Aligned_cols=84  Identities=12%  Similarity=0.242  Sum_probs=64.1

Q ss_pred             CCceeeEEEECCCC--CEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          160 HPRKGERLTLSPSG--SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       160 ~~R~~~~I~lsP~~--~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      +...+.+++.+|++  .++++....|.|.++|+.++..++..+|+.+    +|....-.             ++..  ++
T Consensus       516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~----~v~~v~~s-------------pdg~--~l  576 (694)
T 3dm0_A          516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG----YVSTVAVS-------------PDGS--LC  576 (694)
T ss_dssp             CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS----CEEEEEEC-------------TTSS--EE
T ss_pred             CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC----CEEEEEEe-------------CCCC--EE
Confidence            34557899999986  5788888899999999999999999999887    44332211             1111  45


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      +-+..+|.|.||++++|.++..+..
T Consensus       577 ~sg~~Dg~i~iwd~~~~~~~~~~~~  601 (694)
T 3dm0_A          577 ASGGKDGVVLLWDLAEGKKLYSLEA  601 (694)
T ss_dssp             EEEETTSBCEEEETTTTEEEECCBC
T ss_pred             EEEeCCCeEEEEECCCCceEEEecC
Confidence            6778899999999999998876653

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=96.08  E-value=0.042  Score=49.43  Aligned_cols=82  Identities=15%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc---eeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL---VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~---~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      .|..+...+.+++.+|+++++|+....|.|.++|+.++   ..++..+++.+.    +....-.          |   +.
T Consensus       100 ~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~----v~~~~~~----------p---~~  162 (345)
T 3fm0_A          100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD----VKHVVWH----------P---SQ  162 (345)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC----EEEEEEC----------S---SS
T ss_pred             EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC----eEEEEEC----------C---CC
Confidence            36666778999999999999999999999999999876   456777777662    2211100          0   01


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCe
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~R  256 (307)
                      .  +++-+-.+|.|.||+++.+..
T Consensus       163 ~--~l~s~s~d~~i~~w~~~~~~~  184 (345)
T 3fm0_A          163 E--LLASASYDDTVKLYREEEDDW  184 (345)
T ss_dssp             S--CEEEEETTSCEEEEEEETTEE
T ss_pred             C--EEEEEeCCCcEEEEEecCCCE
Confidence            1  335566788999998876643

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=96.05  E-value=0.058  Score=48.48  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=58.0

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc--eeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~--~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .+...+.+|+.+|+|+++|++...|.|.|+|+.++  ..++..+|+.+.    |....-.             ++..  +
T Consensus        59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~----v~~v~~s-------------p~~~--~  119 (345)
T 3fm0_A           59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE----VKSVAWA-------------PSGN--L  119 (345)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC----EEEEEEC-------------TTSS--E
T ss_pred             ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC----ceEEEEe-------------CCCC--E
Confidence            34667889999999999999999999999999876  467888888773    3221110             0111  4


Q ss_pred             EEEcCCCCeEEEeecCCCCe
Q 021797          237 AIHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~R  256 (307)
                      ++-+-.+|.|.||+++.+..
T Consensus       120 l~s~s~D~~v~iwd~~~~~~  139 (345)
T 3fm0_A          120 LATCSRDKSVWVWEVDEEDE  139 (345)
T ss_dssp             EEEEETTSCEEEEEECTTSC
T ss_pred             EEEEECCCeEEEEECCCCCC
Confidence            45677899999999987643

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=96.04  E-value=0.052  Score=50.36  Aligned_cols=88  Identities=14%  Similarity=0.183  Sum_probs=60.8

Q ss_pred             cccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCc---eeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          156 CLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQAL---VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~---~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      .+......+..|+.+| ++.++++....|.|.++|+.++   ..+...+++...    +....-.          +. . 
T Consensus       226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----v~~i~~~----------p~-~-  289 (430)
T 2xyi_A          226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE----VNCLSFN----------PY-S-  289 (430)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC----EEEEEEC----------SS-C-
T ss_pred             eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC----eEEEEeC----------CC-C-
Confidence            3555677799999999 6789999999999999999987   566666666542    2211110          00 1 


Q ss_pred             cceEEEEEcCCCCeEEEeecCC-CCeEEEEE
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRT-GPRLLTIQ  261 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~-G~RV~a~~  261 (307)
                      .  ++++-+-.+|.|.||++++ +..+..+.
T Consensus       290 ~--~~l~tg~~dg~v~vwd~~~~~~~~~~~~  318 (430)
T 2xyi_A          290 E--FILATGSADKTVALWDLRNLKLKLHSFE  318 (430)
T ss_dssp             T--TEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred             C--CEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence            1  2445566789999999998 45566665

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=96.00  E-value=0.061  Score=49.84  Aligned_cols=81  Identities=15%  Similarity=0.126  Sum_probs=55.2

Q ss_pred             ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCCceeEEe--ecccccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          157 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRL--WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       157 l~D~~R~~~~I~lsP-~~~lAavtDslGRV~LiD~~~~~ivRm--WKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      ..-..+.+.+|+.+| +++++|+.+..|.|.|+|+.++....+  .+|+.++    |....=          .|.  +..
T Consensus       115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~----V~~l~f----------~p~--~~~  178 (435)
T 4e54_B          115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGS----ITGLKF----------NPL--NTN  178 (435)
T ss_dssp             EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCC----CCEEEE----------CSS--CTT
T ss_pred             CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCC----EEEEEE----------eCC--CCC
Confidence            334467899999999 568999999999999999988765444  4566652    211110          000  111


Q ss_pred             eEEEEEcCCCCeEEEeecCCCC
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~  255 (307)
                        +++-+..+|.|.||+++++.
T Consensus       179 --~l~s~s~D~~v~iwd~~~~~  198 (435)
T 4e54_B          179 --QFYASSMEGTTRLQDFKGNI  198 (435)
T ss_dssp             --EEEEECSSSCEEEEETTSCE
T ss_pred             --EEEEEeCCCEEEEeeccCCc
Confidence              34677889999999998543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=95.86  E-value=0.013  Score=54.49  Aligned_cols=100  Identities=12%  Similarity=0.027  Sum_probs=61.1

Q ss_pred             CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecc-cccccc--cccCCCCCCcceE
Q 021797          159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK-DAATSS--AYYAPVKSDYCLC  235 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~-~~~~~~--~~~~~~k~~~~l~  235 (307)
                      .+...+.+|+.+|+|++++++...|.|.|+|+.++..+....++-.....|+...... ......  ....+   +.. +
T Consensus       294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~-~  369 (435)
T 4e54_B          294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYP---DPN-F  369 (435)
T ss_dssp             BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCC---CTT-S
T ss_pred             eccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcC---CCC-e
Confidence            3456678899999999999999999999999999998888777655333332111000 000000  00000   000 1


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++......+.|+||++.+|+.+..+.-
T Consensus       370 ~~~~~~~~~~i~iwd~~~g~~~~~l~~  396 (435)
T 4e54_B          370 KSCTPYELRTIDVFDGNSGKMMCQLYD  396 (435)
T ss_dssp             CCSSTTCCCCEEEECSSSCCEEEEECC
T ss_pred             EEEEecCCCEEEEEECCCCcEEEEEeC
Confidence            112223346799999999998877653

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=95.85  E-value=0.027  Score=58.88  Aligned_cols=95  Identities=14%  Similarity=0.178  Sum_probs=65.1

Q ss_pred             CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE-----eec-ccccceeeEEEEEecccccccccccCC
Q 021797          154 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR-----LWK-GYRDASCVFMEMLVNKDAATSSAYYAP  227 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR-----mWK-GyRDAqc~Wi~~~~~~~~~~~~~~~~~  227 (307)
                      +..|..+.-.+.+|+.||+| ++|+.+..|.|.|+|+.++.++.     -|+ |+.+    ||...+=..     ..   
T Consensus       568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~----~V~sv~Fs~-----~~---  634 (902)
T 2oaj_A          568 STAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA----CVTCIEFVI-----ME---  634 (902)
T ss_dssp             EEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC----CEEEEEEEE-----EE---
T ss_pred             eEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc----ceEEEEEEE-----Ee---
Confidence            34466677889999999999 99999999999999999988874     343 6555    443222100     00   


Q ss_pred             CCCC-cceEEEEEcCCCCeEEEeec---CCCCeEEEEE
Q 021797          228 VKSD-YCLCLAIHAPRKGIIEVWQM---RTGPRLLTIQ  261 (307)
Q Consensus       228 ~k~~-~~l~LVIyaprRg~lEVW~~---~~G~RV~a~~  261 (307)
                      .++| +.--.++-+..+|.|.+|++   ++|..++.+.
T Consensus       635 ~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~  672 (902)
T 2oaj_A          635 YGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLM  672 (902)
T ss_dssp             CTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE
T ss_pred             cCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEec
Confidence            0011 00124466788999999999   8999877765

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=95.84  E-value=0.035  Score=56.19  Aligned_cols=82  Identities=13%  Similarity=0.109  Sum_probs=59.6

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcC--CceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ--ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~--~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +..+...+.+++.+|+|+++++++..|.|.|+|+.  ++..++.++|+++.    |....-..          .+ +.. 
T Consensus         5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~----V~~l~~s~----------~~-~~~-   68 (753)
T 3jro_A            5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAH----------PK-FGT-   68 (753)
T ss_dssp             ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSC----EEEEEECC----------TT-SCS-
T ss_pred             cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCc----eEEEEecC----------CC-CCC-
Confidence            45567778999999999999999999999999998  77889999999773    32221100          00 011 


Q ss_pred             EEEEEcCCCCeEEEeecCCCC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~  255 (307)
                       +++-+..+|.|.||++++|.
T Consensus        69 -~l~s~s~Dg~I~vwd~~~~~   88 (753)
T 3jro_A           69 -ILASCSYDGKVLIWKEENGR   88 (753)
T ss_dssp             -EEEEEETTSCEEEEEEETTE
T ss_pred             -EEEEEeCCCeEEEEECCCCc
Confidence             44566779999999999886

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=95.81  E-value=0.17  Score=46.47  Aligned_cols=26  Identities=23%  Similarity=0.562  Sum_probs=21.6

Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++-+-.+|.|.||++++|..+..+..
T Consensus       332 l~~~~~dg~i~vwd~~~~~~~~~~~~  357 (445)
T 2ovr_B          332 LVSGNADSTVKIWDIKTGQCLQTLQG  357 (445)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECS
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEEcc
Confidence            34566799999999999999888874

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=95.75  E-value=0.098  Score=46.59  Aligned_cols=76  Identities=17%  Similarity=0.076  Sum_probs=52.7

Q ss_pred             EEECCCCCEEEE-EcCCC--cEEEEEcCCceeEEeecccccce--eeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          167 LTLSPSGSLAAI-TDSLG--RILLLDTQALVVVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       167 I~lsP~~~lAav-tDslG--RV~LiD~~~~~ivRmWKGyRDAq--c~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      .+.||+|+++|. ++..|  +|.++|+.++.+.++-.|..+..  ..|-    +               +..  .++|+.
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~s----p---------------dg~--~l~~~~   99 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLS----P---------------DDD--ALFYVK   99 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEEC----T---------------TSS--EEEEEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEc----C---------------CCC--EEEEEe
Confidence            679999986666 55467  59999999999999998876643  2221    1               111  234555


Q ss_pred             CCCeEEEeecCCCCeEEEEEec
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      ..+.|-+|++.+|........+
T Consensus       100 ~~~~l~~~d~~~g~~~~~~~~~  121 (388)
T 3pe7_A          100 DGRNLMRVDLATLEENVVYQVP  121 (388)
T ss_dssp             TTTEEEEEETTTCCEEEEEECC
T ss_pred             CCCeEEEEECCCCcceeeeech
Confidence            6678999999998876554443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=95.65  E-value=0.17  Score=49.70  Aligned_cols=122  Identities=8%  Similarity=-0.008  Sum_probs=71.9

Q ss_pred             ceeeEEEECCCCCEEEEEc-CCCcEEEEEcCCceeEEeecccccceeeE-EEEEecccccccccccCCCCCCcceEEEEE
Q 021797          162 RKGERLTLSPSGSLAAITD-SLGRILLLDTQALVVVRLWKGYRDASCVF-MEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtD-slGRV~LiD~~~~~ivRmWKGyRDAqc~W-i~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      +....+.++|+|+++.++. ..+.|.+||+.++.++...+......-++ +.....               +...+++.-
T Consensus       324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p---------------~~g~~~~s~  388 (543)
T 1nir_A          324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHP---------------KYGPVWSTS  388 (543)
T ss_dssp             SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEET---------------TTEEEEEEE
T ss_pred             cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCC---------------CCccEEEec
Confidence            4455789999999776654 46899999999999999887532222110 111111               111122222


Q ss_pred             cCCCCeEEEeecCC-------CCeEEEEEecCCe---EEeccCcccccccCCCCCc-----ccEEEEEeCCCCceE
Q 021797          240 APRKGIIEVWQMRT-------GPRLLTIQCAKGS---KILQPTYRFGSSMASSPYV-----PLEVFLLNGDSGQLS  300 (307)
Q Consensus       240 aprRg~lEVW~~~~-------G~RV~a~~v~~~~---~Ll~~~~~~~~~~~~~~~~-----~~~~~ll~~~~g~l~  300 (307)
                      .-..+.|.||++.+       ++.|..+....++   .-+.+..+.+-+  ..+.+     -..+.++|-.+++..
T Consensus       389 ~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~~~~~~  462 (543)
T 1nir_A          389 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV--DTTFNPDARISQSVAVFDLKNLDAK  462 (543)
T ss_dssp             BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEE--CCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred             cCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEE--ecCCCCCcccCceEEEEECCCCCCC
Confidence            22468999999998       8888888875433   112222222211  11122     247888888777653

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=95.65  E-value=0.23  Score=43.72  Aligned_cols=123  Identities=18%  Similarity=0.208  Sum_probs=62.6

Q ss_pred             eeEEEECCCCCEEEEE-cCCCcEEEEEcCC--ceeEE--eeccccc-----ceeeEEEEEecccccccccccCCCCCCcc
Q 021797          164 GERLTLSPSGSLAAIT-DSLGRILLLDTQA--LVVVR--LWKGYRD-----ASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       164 ~~~I~lsP~~~lAavt-DslGRV~LiD~~~--~~ivR--mWKGyRD-----Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      ...++++|+|++++++ ...++|.++|+..  +.+..  .......     ....-+.+.                ++..
T Consensus       189 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s----------------pdG~  252 (347)
T 3hfq_A          189 PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS----------------HDGH  252 (347)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC----------------TTSC
T ss_pred             CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC----------------CCCC
Confidence            4569999999966664 5678899988774  54322  2221111     011111110                1111


Q ss_pred             eEEEEEcCCCCeEEEeecCC-C--CeEEEEEec---CCeEEeccCcccccccCCCCCcccEEEEEeCCCCceEEEec
Q 021797          234 LCLAIHAPRKGIIEVWQMRT-G--PRLLTIQCA---KGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNR  304 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~-G--~RV~a~~v~---~~~~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~~in~  304 (307)
                       +|++-....+.|.||++.. |  ..+..+...   +.+.-+.+..+++-. ....-..-.++-+|+.+|.|+.+..
T Consensus       253 -~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v-~~~~~~~v~v~~~d~~tg~l~~~~~  327 (347)
T 3hfq_A          253 -FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVV-VNQNTDNATLYARDLTSGKLSLLQK  327 (347)
T ss_dssp             -EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEE-EETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             -EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEE-EEcCCCcEEEEEEeCCCCeEEeccc
Confidence             3444445578999999972 2  444444441   112223332221111 0001123455666999999997764

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=95.64  E-value=0.072  Score=52.40  Aligned_cols=76  Identities=16%  Similarity=0.271  Sum_probs=55.1

Q ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCceeEEeec-ccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEE
Q 021797          169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE  247 (307)
Q Consensus       169 lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK-GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lE  247 (307)
                      ++|++++.++....|.|.+||..++.+++.++ |+.   . +.-....               +.. +|++- -+.|.|.
T Consensus       145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~---~-~~v~~sp---------------dg~-~l~v~-~~d~~V~  203 (543)
T 1nir_A          145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA---V-HISRMSA---------------SGR-YLLVI-GRDARID  203 (543)
T ss_dssp             CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT---E-EEEEECT---------------TSC-EEEEE-ETTSEEE
T ss_pred             cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc---c-ceEEECC---------------CCC-EEEEE-CCCCeEE
Confidence            78999888888788999999999999999999 765   2 2221211               111 22222 3459999


Q ss_pred             Eeec--CCCCeEEEEEecCC
Q 021797          248 VWQM--RTGPRLLTIQCAKG  265 (307)
Q Consensus       248 VW~~--~~G~RV~a~~v~~~  265 (307)
                      +|++  .++..+..+.++.+
T Consensus       204 v~D~~~~t~~~~~~i~~g~~  223 (543)
T 1nir_A          204 MIDLWAKEPTKVAEIKIGIE  223 (543)
T ss_dssp             EEETTSSSCEEEEEEECCSE
T ss_pred             EEECcCCCCcEEEEEecCCC
Confidence            9999  88988888876654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=95.60  E-value=0.034  Score=53.52  Aligned_cols=118  Identities=19%  Similarity=0.124  Sum_probs=71.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCC--cEEEEEcCCceeEEeecccccc--eee-EEEEEecccccccccccCCCCCC
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWKGYRDA--SCV-FMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslG--RV~LiD~~~~~ivRmWKGyRDA--qc~-Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      |.+.......++.||||+++|.+|..|  +|.++|+.++... +..++...  ... |-....         .-+   ++
T Consensus       190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~s---pd  256 (582)
T 3o4h_A          190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWL---------GYL---PD  256 (582)
T ss_dssp             ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEE---------EEC---TT
T ss_pred             eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccce---------eEc---CC
Confidence            555566678999999999988888888  9999999999887 77665321  011 000000         000   12


Q ss_pred             cceEEEEEcCCCCeEEEeecCCCCeE-------EEEEecCCeEEeccCcccccccCCCCCcccEEEEEeCCCCceEE
Q 021797          232 YCLCLAIHAPRKGIIEVWQMRTGPRL-------LTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSV  301 (307)
Q Consensus       232 ~~l~LVIyaprRg~lEVW~~~~G~RV-------~a~~v~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~~  301 (307)
                      .  .+++.+-.+|.+.||.+  |..+       ..+.+. +++++...        ++...|.+++++|.+ |.++.
T Consensus       257 g--~~~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~--------s~~~~p~~l~~~d~~-~~~~~  319 (582)
T 3o4h_A          257 G--RLAVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSH--------TSLSTPPRIVSLPSG-EPLLE  319 (582)
T ss_dssp             S--CEEEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEE--------EETTEEEEEEEETTC-CEEEC
T ss_pred             C--cEEEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEE--------cCCCCCCeEEEEcCC-CceEE
Confidence            2  25566677899999998  5433       333334 34443221        123446778888764 34443

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=95.58  E-value=0.52  Score=40.42  Aligned_cols=29  Identities=7%  Similarity=0.121  Sum_probs=23.3

Q ss_pred             eeeEEEECCCCCEEEEEc-CCCcEEEEEcC
Q 021797          163 KGERLTLSPSGSLAAITD-SLGRILLLDTQ  191 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtD-slGRV~LiD~~  191 (307)
                      ....++++|+|+++++++ ..|+|.++|+.
T Consensus       179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~  208 (343)
T 1ri6_A          179 GPRHMVFHPNEQYAYCVNELNSSVDVWELK  208 (343)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred             CcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence            455799999998766654 78999999994

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=95.50  E-value=0.17  Score=42.08  Aligned_cols=46  Identities=17%  Similarity=0.203  Sum_probs=38.0

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCC-ceeEEeecccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYR  203 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~-~~ivRmWKGyR  203 (307)
                      +......+..++.+|+|++++++. .|.|.++|+.+ +...++.++..
T Consensus        37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~   83 (297)
T 2ojh_A           37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA   83 (297)
T ss_dssp             EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC
T ss_pred             eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc
Confidence            334466788999999999888865 68999999999 99999888764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=95.45  E-value=0.31  Score=45.43  Aligned_cols=46  Identities=15%  Similarity=0.159  Sum_probs=35.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCC---CcEEEEEcCCceeEEeecccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSL---GRILLLDTQALVVVRLWKGYR  203 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDsl---GRV~LiD~~~~~ivRmWKGyR  203 (307)
                      |........+++.||+|+++|.+...   .+|.++|+.++...++ .++.
T Consensus       174 l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l-~~~~  222 (415)
T 2hqs_A          174 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFP  222 (415)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-ECCS
T ss_pred             EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe-ecCC
Confidence            55556678899999999887776544   4999999999988764 4443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=95.44  E-value=0.11  Score=47.80  Aligned_cols=79  Identities=13%  Similarity=0.185  Sum_probs=58.7

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      ...+..++  +++++++++...|.|.++|+.++..++.++|+.+.- ..+..  .            .    .  +++-+
T Consensus       256 ~~~v~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v-~~~~~--~------------~----~--~l~~g  312 (435)
T 1p22_A          256 RAAVNVVD--FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQY--R------------D----R--LVVSG  312 (435)
T ss_dssp             SSCEEEEE--EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEE--E------------T----T--EEEEE
T ss_pred             CCcEEEEE--eCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcE-EEEEe--C------------C----C--EEEEE
Confidence            33344444  488999999999999999999999999999987632 22221  1            0    1  44566


Q ss_pred             CCCCeEEEeecCCCCeEEEEEe
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v  262 (307)
                      -.+|.|.||++++|..+..+..
T Consensus       313 ~~dg~i~iwd~~~~~~~~~~~~  334 (435)
T 1p22_A          313 SSDNTIRLWDIECGACLRVLEG  334 (435)
T ss_dssp             ETTSCEEEEETTTCCEEEEECC
T ss_pred             eCCCeEEEEECCCCCEEEEEeC
Confidence            6899999999999998887764

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=95.42  E-value=0.13  Score=44.79  Aligned_cols=84  Identities=11%  Similarity=0.007  Sum_probs=51.7

Q ss_pred             CceeeEEEECCCCCEEEEE-cCCCcEEEEEcCCcee-EEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          161 PRKGERLTLSPSGSLAAIT-DSLGRILLLDTQALVV-VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavt-DslGRV~LiD~~~~~i-vRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      .+.. .++++|+|+++.++ ...++|.++|+.++.+ ++..........+ +...                ++.. +|+.
T Consensus        40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~s----------------~dg~-~l~~  100 (331)
T 3u4y_A           40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD-VDIT----------------PDDQ-FAVT  100 (331)
T ss_dssp             CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC-EEEC----------------TTSS-EEEE
T ss_pred             CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc-eEEC----------------CCCC-EEEE
Confidence            4445 89999999866655 4488999999999987 6666554332110 1110                0111 2332


Q ss_pred             EcCCCC--eEEEeecCCCCeEEEEEec
Q 021797          239 HAPRKG--IIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       239 yaprRg--~lEVW~~~~G~RV~a~~v~  263 (307)
                      .....+  .|.||++.+|..+..+..+
T Consensus       101 ~~~~~~~~~i~v~d~~~~~~~~~~~~~  127 (331)
T 3u4y_A          101 VTGLNHPFNMQSYSFLKNKFISTIPIP  127 (331)
T ss_dssp             CCCSSSSCEEEEEETTTTEEEEEEECC
T ss_pred             ecCCCCcccEEEEECCCCCeEEEEECC
Confidence            222223  8999999988877766654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=95.38  E-value=0.16  Score=44.72  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=25.7

Q ss_pred             ceeeEEEECCCCCEEEEEc--CCCcEEEEEcCCcee
Q 021797          162 RKGERLTLSPSGSLAAITD--SLGRILLLDTQALVV  195 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtD--slGRV~LiD~~~~~i  195 (307)
                      .....++++|+|+++++.+  .-|+|.++|+.++..
T Consensus        40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~   75 (347)
T 3hfq_A           40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA   75 (347)
T ss_dssp             SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE
T ss_pred             CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE
Confidence            3445699999999665553  369999999987764

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=95.37  E-value=0.3  Score=42.38  Aligned_cols=76  Identities=13%  Similarity=0.054  Sum_probs=49.1

Q ss_pred             ceeeEEEECCCCCEEEEEc-CCCcEEEEEcCCcee---EEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          162 RKGERLTLSPSGSLAAITD-SLGRILLLDTQALVV---VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtD-slGRV~LiD~~~~~i---vRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....++++|+|+++.+++ ..++|.++|+.++.+   ++.+.+-..  ..-+.+.                ++.. +|+
T Consensus       176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~--~~~~~~s----------------pdg~-~l~  236 (331)
T 3u4y_A          176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL--PGTIVVS----------------RDGS-TVY  236 (331)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC--CCCEEEC----------------TTSS-EEE
T ss_pred             CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC--CceEEEC----------------CCCC-EEE
Confidence            3467899999998665554 578999999999988   665543211  1111110                1111 344


Q ss_pred             EEcCCCCeEEEeecCCCCe
Q 021797          238 IHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~R  256 (307)
                      +-....+.|.+|++.+|..
T Consensus       237 v~~~~~~~i~~~d~~~~~~  255 (331)
T 3u4y_A          237 VLTESTVDVFNFNQLSGTL  255 (331)
T ss_dssp             EECSSEEEEEEEETTTTEE
T ss_pred             EEEcCCCEEEEEECCCCce
Confidence            4445678899999998876

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=95.31  E-value=0.21  Score=49.04  Aligned_cols=43  Identities=12%  Similarity=-0.011  Sum_probs=36.1

Q ss_pred             CceeeEEEECCCCCEEEEEcC-CC-----cEEEEEcCCceeEEeecccc
Q 021797          161 PRKGERLTLSPSGSLAAITDS-LG-----RILLLDTQALVVVRLWKGYR  203 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDs-lG-----RV~LiD~~~~~ivRmWKGyR  203 (307)
                      .+....++.||+|+++|.+.. .|     .|.++|+.++...++..+..
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~   84 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKV   84 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGG
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhh
Confidence            456789999999998887655 77     99999999999999887654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=95.00  E-value=0.096  Score=48.56  Aligned_cols=79  Identities=13%  Similarity=0.223  Sum_probs=56.5

Q ss_pred             ccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCC-ceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQA-LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~-lAavtDslGRV~LiD~~~-~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +......+.+|+.+|++. ++|+....|.|.++|+.+ ...++.++++.+    .+....-.          |.  ..  
T Consensus       273 ~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~----~v~~i~~s----------p~--~~--  334 (430)
T 2xyi_A          273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD----EIFQVQWS----------PH--NE--  334 (430)
T ss_dssp             EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS----CEEEEEEC----------SS--CT--
T ss_pred             eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC----CEEEEEEC----------CC--CC--
Confidence            445566788999999886 788888899999999998 677888888765    23221110          00  11  


Q ss_pred             EEEEEcCCCCeEEEeecCC
Q 021797          235 CLAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~  253 (307)
                      ++++-+-..|.|.||++..
T Consensus       335 ~~l~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          335 TILASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             TEEEEEETTSCCEEEEGGG
T ss_pred             CEEEEEeCCCcEEEEeCCC
Confidence            2455666789999999987

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=94.88  E-value=0.86  Score=41.06  Aligned_cols=37  Identities=8%  Similarity=0.016  Sum_probs=30.2

Q ss_pred             CCceeeEEEECCCCCEEEEEcC-CCcEEEEEcC-CceeE
Q 021797          160 HPRKGERLTLSPSGSLAAITDS-LGRILLLDTQ-ALVVV  196 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDs-lGRV~LiD~~-~~~iv  196 (307)
                      .......++++|+|++++++|. .++|.++|+. +|.+.
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~  181 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE  181 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence            3456788999999998888875 5799999998 77654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=94.85  E-value=0.35  Score=41.53  Aligned_cols=82  Identities=12%  Similarity=0.097  Sum_probs=48.8

Q ss_pred             CceeeEEEECCCCCEEEEEc-CCCcEEEEEcC----CceeEEeecccccc-eeeEEEEEecccccccccccCCCCCCcce
Q 021797          161 PRKGERLTLSPSGSLAAITD-SLGRILLLDTQ----ALVVVRLWKGYRDA-SCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtD-slGRV~LiD~~----~~~ivRmWKGyRDA-qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      .+....|+++|+|+++++++ ..|+|.++|+.    +...+......... .++|   .                ++.. 
T Consensus       230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~---s----------------~dg~-  289 (343)
T 1ri6_A          230 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNV---D----------------HSGK-  289 (343)
T ss_dssp             CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEE---C----------------TTSS-
T ss_pred             cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEE---C----------------CCCC-
Confidence            44566899999998777655 68999999998    34444444332211 1111   0                0111 


Q ss_pred             EEEEEcCCCCeEEEeec--CCC--CeEEEEEe
Q 021797          235 CLAIHAPRKGIIEVWQM--RTG--PRLLTIQC  262 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~--~~G--~RV~a~~v  262 (307)
                      +|++-....|.|.||++  .+|  .++..+.+
T Consensus       290 ~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~  321 (343)
T 1ri6_A          290 YLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV  321 (343)
T ss_dssp             EEEEECTTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred             EEEEecCCCCeEEEEEEcCCCceeeEcccccc
Confidence            45555556799999954  455  34555554

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=94.84  E-value=0.14  Score=44.27  Aligned_cols=80  Identities=11%  Similarity=-0.035  Sum_probs=55.1

Q ss_pred             EEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeE
Q 021797          167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGII  246 (307)
Q Consensus       167 I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~l  246 (307)
                      +++++++++.++....|.|.++|+.++.+++.++.-..-...-+.+..                +.. +|++-....+.|
T Consensus         5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~----------------dg~-~~~v~~~~~~~i   67 (349)
T 1jmx_B            5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP----------------DNR-TAYVLNNHYGDI   67 (349)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT----------------TSS-EEEEEETTTTEE
T ss_pred             ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECC----------------CCC-EEEEEeCCCCcE
Confidence            457788888888888899999999999999888754310111111110                111 344555678999


Q ss_pred             EEeecCCCCeEEEEEec
Q 021797          247 EVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       247 EVW~~~~G~RV~a~~v~  263 (307)
                      .+|++.+|..+..+.++
T Consensus        68 ~~~d~~t~~~~~~~~~~   84 (349)
T 1jmx_B           68 YGIDLDTCKNTFHANLS   84 (349)
T ss_dssp             EEEETTTTEEEEEEESC
T ss_pred             EEEeCCCCcEEEEEEcc
Confidence            99999999888777753

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=94.69  E-value=0.12  Score=52.94  Aligned_cols=77  Identities=10%  Similarity=0.048  Sum_probs=59.4

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce-------eEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALV-------VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~-------ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      |.+.+++.||+|++.|++...|.|-|+|+.++.       .++.++++...+-.||....-.             ++.  
T Consensus       130 ~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-------------Pdg--  194 (588)
T 2j04_A          130 RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-------------EDV--  194 (588)
T ss_dssp             TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-------------TTE--
T ss_pred             ccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc-------------CCc--
Confidence            458899999999999999999999999999995       5889866654445688765431             222  


Q ss_pred             EEEEEcCCCCeEEEeecCCCC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~  255 (307)
                        ++-+..++.+.+|+++.+.
T Consensus       195 --Laass~D~tVrlWd~~~~~  213 (588)
T 2j04_A          195 --LVAALSNNSVFSMTVSASS  213 (588)
T ss_dssp             --EEEEETTCCEEEECCCSSS
T ss_pred             --EEEEeCCCeEEEEECCCCc
Confidence              2445669999999998766

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=94.66  E-value=0.16  Score=43.88  Aligned_cols=43  Identities=16%  Similarity=0.176  Sum_probs=39.5

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccc-cc
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY-RD  204 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGy-RD  204 (307)
                      ..+.+++.+|+++++++.+..|+|.++|+.++..++.++++ .+
T Consensus       252 ~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~  295 (342)
T 1yfq_A          252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED  295 (342)
T ss_dssp             CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred             eeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC
Confidence            37889999999999999999999999999999999999998 54

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=94.64  E-value=0.36  Score=42.20  Aligned_cols=83  Identities=7%  Similarity=0.081  Sum_probs=58.3

Q ss_pred             ccCCCceeeEEEECCC-------------CCEEEEEcCCCcEEEEEcCCce----eEEeecccccceeeEEEEEeccccc
Q 021797          157 LKDHPRKGERLTLSPS-------------GSLAAITDSLGRILLLDTQALV----VVRLWKGYRDASCVFMEMLVNKDAA  219 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~-------------~~lAavtDslGRV~LiD~~~~~----ivRmWKGyRDAqc~Wi~~~~~~~~~  219 (307)
                      +......+.+++.+|+             ++++|+....|.|.|+|+.++.    .++.++|+.+    ||....-.   
T Consensus       141 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~----~V~~v~~s---  213 (297)
T 2pm7_B          141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWS---  213 (297)
T ss_dssp             EECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEEC---
T ss_pred             eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC----ceEEEEEC---
Confidence            4445556788888886             5788898899999999998876    7778899887    55432211   


Q ss_pred             ccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCC
Q 021797          220 TSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       220 ~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                             |.....  .+++-+..+|.|.||+++++.
T Consensus       214 -------p~~~~~--~~las~s~D~~v~iWd~~~~~  240 (297)
T 2pm7_B          214 -------PTVLLR--SYMASVSQDRTCIIWTQDNEQ  240 (297)
T ss_dssp             -------CCCSSS--EEEEEEETTSCEEEEEESSTT
T ss_pred             -------CCCCCc--eEEEEEECCCcEEEEEeCCCC
Confidence                   000001  245678889999999998753

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=94.61  E-value=0.51  Score=39.06  Aligned_cols=120  Identities=20%  Similarity=0.180  Sum_probs=63.0

Q ss_pred             eeEEEECCCCCEEE-EEcCCC--cEEEEEcCCceeEEeecccccc-eeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          164 GERLTLSPSGSLAA-ITDSLG--RILLLDTQALVVVRLWKGYRDA-SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       164 ~~~I~lsP~~~lAa-vtDslG--RV~LiD~~~~~ivRmWKGyRDA-qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ...++.+|+|++++ +.+..|  +|..+|+.++...++...-... .+.|-    + +              .. +|++-
T Consensus       131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s----~-d--------------g~-~l~~~  190 (297)
T 2ojh_A          131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYS----P-D--------------GR-WIYFN  190 (297)
T ss_dssp             EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEEC----T-T--------------SS-EEEEE
T ss_pred             ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceEC----C-C--------------CC-EEEEE
Confidence            67789999998776 455556  5666667778776665432221 11110    0 1              11 34555


Q ss_pred             cCCCCeEEEeecC-CCCeEEEEEecCC---eEEeccCcccc--cc-cCC----CCCcccEEEEEeCCCCceEEEe
Q 021797          240 APRKGIIEVWQMR-TGPRLLTIQCAKG---SKILQPTYRFG--SS-MAS----SPYVPLEVFLLNGDSGQLSVLN  303 (307)
Q Consensus       240 aprRg~lEVW~~~-~G~RV~a~~v~~~---~~Ll~~~~~~~--~~-~~~----~~~~~~~~~ll~~~~g~l~~in  303 (307)
                      +...+.++||.+. .+..+..+.-...   +--+.+..+.+  +. ...    ..+...+++++|..+|.++.+.
T Consensus       191 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~  265 (297)
T 2ojh_A          191 SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF  265 (297)
T ss_dssp             ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred             ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence            5567888899886 4555444332211   00111111111  11 000    0013367999999888876554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=94.59  E-value=1.1  Score=39.67  Aligned_cols=31  Identities=13%  Similarity=0.178  Sum_probs=24.6

Q ss_pred             eeeEEEECCCCCEEEEEcC-CCcEEEEEcCCc
Q 021797          163 KGERLTLSPSGSLAAITDS-LGRILLLDTQAL  193 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDs-lGRV~LiD~~~~  193 (307)
                      +...++++|+|++++++|. .++|.++|+...
T Consensus       156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~  187 (361)
T 3scy_A          156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPN  187 (361)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence            4577999999997777765 688999987643

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=94.55  E-value=1.2  Score=41.39  Aligned_cols=43  Identities=19%  Similarity=0.242  Sum_probs=31.7

Q ss_pred             ccCCCceeeEEEECCCCCEEE-EE--cCCCcEEEEEcCCceeEEee
Q 021797          157 LKDHPRKGERLTLSPSGSLAA-IT--DSLGRILLLDTQALVVVRLW  199 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAa-vt--DslGRV~LiD~~~~~ivRmW  199 (307)
                      +.........++.+|+|+++| +.  |...+|.++|+.++...++-
T Consensus       218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~  263 (415)
T 2hqs_A          218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT  263 (415)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred             eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc
Confidence            444455678999999998666 44  33456999999999876554

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=94.21  E-value=0.11  Score=47.72  Aligned_cols=86  Identities=7%  Similarity=-0.010  Sum_probs=58.4

Q ss_pred             ccCCCceeeEEEECC--------CCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCC
Q 021797          157 LKDHPRKGERLTLSP--------SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       157 l~D~~R~~~~I~lsP--------~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      +.-+...+.+|+.+|        +++++|..-..+.|.|+|+.++..+...+++++.-.. +... +.            
T Consensus       132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~-v~~~-p~------------  197 (393)
T 4gq1_A          132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGIS-VQFR-PS------------  197 (393)
T ss_dssp             TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEE-EEEE-TT------------
T ss_pred             cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEE-EEEC-CC------------
Confidence            445567789999998        7899999888999999999887766666666663211 1111 10            


Q ss_pred             CCCcceEEEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       229 k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                        +.  .+++-+..+|.|.||+++++......
T Consensus       198 --~~--~~l~~~~~d~~v~~wd~~t~~~~~~~  225 (393)
T 4gq1_A          198 --NP--NQLIVGERNGNIRIFDWTLNLSAEEN  225 (393)
T ss_dssp             --EE--EEEEEEETTSEEEEEETTCCC-----
T ss_pred             --CC--ceEEecCCCCEEEEEECCCCcccccc
Confidence              11  35567888999999999988765443

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=94.18  E-value=0.71  Score=46.64  Aligned_cols=82  Identities=15%  Similarity=0.133  Sum_probs=59.1

Q ss_pred             ccCCCceeeEEEECCC--CCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSPS--GSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~--~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +..+...+.+++.+|+  +++++++...|.|.++|+.++.  .++..+++.+    .|....-.          +.. +.
T Consensus        49 l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~----~V~~v~~s----------p~~-~~  113 (753)
T 3jro_A           49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWA----------PHE-YG  113 (753)
T ss_dssp             ECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS----CEEEEEEC----------CGG-GC
T ss_pred             ccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCC----CeEEEEEC----------CCC-CC
Confidence            4555677889999997  9999999999999999999987  6777777765    22221110          000 01


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                      .  +++.+-.+|.|.||+++++.
T Consensus       114 ~--~l~sgs~dg~I~vwdl~~~~  134 (753)
T 3jro_A          114 P--LLLVASSDGKVSVVEFKENG  134 (753)
T ss_dssp             S--EEEEEETTSEEEEEECCSSS
T ss_pred             C--EEEEEeCCCcEEEEEeecCC
Confidence            1  45667789999999999883

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=94.10  E-value=0.45  Score=48.67  Aligned_cols=32  Identities=13%  Similarity=0.099  Sum_probs=28.6

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCC
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQA  192 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~  192 (307)
                      ...+..++-||+|+++|++++.|.|.|+|..+
T Consensus        85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~  116 (588)
T 2j04_A           85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK  116 (588)
T ss_dssp             SCCEEEEEECSSSSCEEEEETTSCEEEEETTE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Confidence            34688999999999999999999999999655

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=93.99  E-value=2.2  Score=38.93  Aligned_cols=115  Identities=13%  Similarity=0.061  Sum_probs=73.3

Q ss_pred             ccCCCce-eeEEEECCCCCEEEEEc--CCCcEEEEEcCCceeEEeec---ccccceeeEEEEEecccccccccccCCCCC
Q 021797          157 LKDHPRK-GERLTLSPSGSLAAITD--SLGRILLLDTQALVVVRLWK---GYRDASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       157 l~D~~R~-~~~I~lsP~~~lAavtD--slGRV~LiD~~~~~ivRmWK---GyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      ++-.++. -+-|.++|+++|.+++-  .-++|..||+.++.+++...   ++.-..+.+.     .              
T Consensus        15 ~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-----g--------------   75 (266)
T 2iwa_A           15 FPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-----N--------------   75 (266)
T ss_dssp             EECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-----T--------------
T ss_pred             EECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-----C--------------
Confidence            4444443 47788999988777763  35799999999999999753   3333222221     0              


Q ss_pred             CcceEEEEEcCCCCeEEEeecCCCCeEEEEEec-CCe-EEeccCcccccccCCCCCcccEEEEEeCCCCc
Q 021797          231 DYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA-KGS-KILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ  298 (307)
Q Consensus       231 ~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~-~~~-~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~  298 (307)
                       ..  |.+-.-+.+.+.|+|..++..+..|.++ +.+ -|-..+.++.-+   .  ....+.+|||.+.+
T Consensus        76 -~~--lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs---~--gs~~l~viD~~t~~  137 (266)
T 2iwa_A           76 -EK--LYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGS---D--GTSILYEIDPHTFK  137 (266)
T ss_dssp             -TE--EEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEE---C--SSSEEEEECTTTCC
T ss_pred             -CE--EEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEE---C--CCCeEEEEECCCCc
Confidence             12  3455667899999999999999999987 332 233222222211   1  13577777776654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=93.99  E-value=0.63  Score=42.63  Aligned_cols=103  Identities=14%  Similarity=0.073  Sum_probs=53.4

Q ss_pred             ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccc---cccccCCC----
Q 021797          157 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT---SSAYYAPV----  228 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~---~~~~~~~~----  228 (307)
                      +......+.+++.+|++ +++++.+..|.|.|+|+.++.....-.+..+....|+..........   ...+....    
T Consensus       182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~  261 (393)
T 4gq1_A          182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR  261 (393)
T ss_dssp             EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred             ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence            44455667899999987 58888999999999999999988877777777766765544321110   00000000    


Q ss_pred             --CCCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          229 --KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       229 --k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                        ..+..  .++-+...+.+.||+++.++....+.
T Consensus       262 ~~~~dg~--~l~s~s~d~~i~vwd~~~~~~~~~l~  294 (393)
T 4gq1_A          262 WIGSDGS--GILAMCKSGAWLRWNLFANNDYNEIS  294 (393)
T ss_dssp             EETTTTC--EEEEECTTSEEEEEEC----------
T ss_pred             eecCCCC--EEEEEeCCCCEEEEECccCCCCceEe
Confidence              01221  34556778999999999988766654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=93.95  E-value=1  Score=39.87  Aligned_cols=130  Identities=11%  Similarity=-0.001  Sum_probs=67.0

Q ss_pred             CCCceeeEEEECC-CCCEEEEEcC------CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCC
Q 021797          159 DHPRKGERLTLSP-SGSLAAITDS------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD  231 (307)
Q Consensus       159 D~~R~~~~I~lsP-~~~lAavtDs------lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~  231 (307)
                      +.......+..|| +|+++|.+..      ..+|.++|+..+.+.++..+.....+.-.. ..+ |          +   
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~-~sp-d----------g---  249 (388)
T 3pe7_A          185 QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF-WVP-D----------G---  249 (388)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE-ECT-T----------S---
T ss_pred             cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccce-ECC-C----------C---
Confidence            3344567899999 9976665433      349999999988877776644221111111 111 1          1   


Q ss_pred             cceEEEEEcCCC--CeEEEeecCCCCeEEEEEecC--------CeEEeccCcccccccCC-----CCCcccEEEEEeCCC
Q 021797          232 YCLCLAIHAPRK--GIIEVWQMRTGPRLLTIQCAK--------GSKILQPTYRFGSSMAS-----SPYVPLEVFLLNGDS  296 (307)
Q Consensus       232 ~~l~LVIyaprR--g~lEVW~~~~G~RV~a~~v~~--------~~~Ll~~~~~~~~~~~~-----~~~~~~~~~ll~~~~  296 (307)
                      ..+.++-+....  +.|-+|++.+|....-...+.        .+..+.+..+.+-...+     +.....+++++|.++
T Consensus       250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~  329 (388)
T 3pe7_A          250 SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN  329 (388)
T ss_dssp             SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred             CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence            122222222222  248999999987433222211        11112222111111000     112346899999999


Q ss_pred             CceEEEe
Q 021797          297 GQLSVLN  303 (307)
Q Consensus       297 g~l~~in  303 (307)
                      |.++.+.
T Consensus       330 ~~~~~l~  336 (388)
T 3pe7_A          330 GTQHRVA  336 (388)
T ss_dssp             TEEEEEE
T ss_pred             CceEEec
Confidence            9887664

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=93.87  E-value=0.25  Score=47.53  Aligned_cols=95  Identities=12%  Similarity=0.049  Sum_probs=55.8

Q ss_pred             CCceeeEEEECCC----CCEEEEEcCCCcEEEEEcCCceeEEe-ecccccceeeEEEEEecccccc----cccccCCCC-
Q 021797          160 HPRKGERLTLSPS----GSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAAT----SSAYYAPVK-  229 (307)
Q Consensus       160 ~~R~~~~I~lsP~----~~lAavtDslGRV~LiD~~~~~ivRm-WKGyRDAqc~Wi~~~~~~~~~~----~~~~~~~~k-  229 (307)
                      +.|.+.+|+.||+    +++.+.+...  +-++++.++..+.- ..||-.    +|++..-...+.    ...+..... 
T Consensus       110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~----~V~~~~~s~dG~~~~s~~~~~~~v~~  183 (356)
T 2w18_A          110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQ----QVEVMTFAEDGGGKENQFLMPPEETI  183 (356)
T ss_dssp             SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTC----EEEEEEECTTSCEEEEEEECCCSSCE
T ss_pred             cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCC----cEEEEEECCCCceeeeeccCCCceee
Confidence            3578889999999    8888875544  44567778887776 456554    444433211110    000000000 


Q ss_pred             -------CCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          230 -------SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       230 -------~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                             .+.  -+++-+..++.|.||++++|+.+.+++.
T Consensus       184 l~fs~~~g~~--~~LaSgS~D~TIkIWDl~TGk~l~tL~g  221 (356)
T 2w18_A          184 LTFAEVQGMQ--EALLGTTIMNNIVIWNLKTGQLLKKMHI  221 (356)
T ss_dssp             EEEEEEETST--TEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             EEeeccCCCC--ceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence                   011  1456778899999999999999999973

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=93.77  E-value=0.4  Score=44.03  Aligned_cols=78  Identities=18%  Similarity=0.150  Sum_probs=54.3

Q ss_pred             EEECCCCCEEEEEcC-----------CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          167 LTLSPSGSLAAITDS-----------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       167 I~lsP~~~lAavtDs-----------lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      ++++|+++.+-++..           -++|.+||+.++.+++-+++-.   ..-|.+..+            +   .  +
T Consensus       259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spd------------g---~--~  318 (361)
T 2oiz_A          259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQ------------R---N--L  318 (361)
T ss_dssp             EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETT------------T---T--E
T ss_pred             EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCC------------C---C--E
Confidence            788998766655532           3589999999999999998876   333333211            1   1  3


Q ss_pred             EEEEcCCCCeEEEeecCCC--CeEEEE-EecCCe
Q 021797          236 LAIHAPRKGIIEVWQMRTG--PRLLTI-QCAKGS  266 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G--~RV~a~-~v~~~~  266 (307)
                      |  |+..++.|-||++.+|  +.+..+ .++++-
T Consensus       319 l--~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P  350 (361)
T 2oiz_A          319 M--LTLDGGNVNVYDISQPEPKLLRTIEGAAEAS  350 (361)
T ss_dssp             E--EEECSSCEEEEECSSSSCEEEEEETTSCSSE
T ss_pred             E--EEeCCCeEEEEECCCCcceeeEEeccCCCCc
Confidence            3  2333499999999999  998887 566653

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=93.57  E-value=3.1  Score=36.93  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=50.5

Q ss_pred             eeeEEEECC-CCCEEEEEc--CCCcEEEEEcCCceeEEeeccccc------ceeeEEEEEecccccccccccCCCCCC-c
Q 021797          163 KGERLTLSP-SGSLAAITD--SLGRILLLDTQALVVVRLWKGYRD------ASCVFMEMLVNKDAATSSAYYAPVKSD-Y  232 (307)
Q Consensus       163 ~~~~I~lsP-~~~lAavtD--slGRV~LiD~~~~~ivRmWKGyRD------Aqc~Wi~~~~~~~~~~~~~~~~~~k~~-~  232 (307)
                      .-..|+++| +|++.+ +|  .-+||.++| ..|..++.+.+.-+      +++.+..-..-.             ++ .
T Consensus       144 ~P~~ia~~~~~g~lyv-~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d-------------~~~g  208 (329)
T 3fvz_A          144 QPTDVAVEPSTGAVFV-SDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALV-------------PHLD  208 (329)
T ss_dssp             SEEEEEECTTTCCEEE-EECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEE-------------TTTT
T ss_pred             CCcEEEEeCCCCeEEE-EeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEE-------------CCCC
Confidence            467899999 666554 45  479999999 67888887753322      233332211110             11 1


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                        .|.|=....+.|.+|+..+|..+..+.
T Consensus       209 --~l~v~d~~~~~I~~~~~~~G~~~~~~~  235 (329)
T 3fvz_A          209 --QLCVADRENGRIQCFKTDTKEFVREIK  235 (329)
T ss_dssp             --EEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             --EEEEEECCCCEEEEEECCCCcEEEEEe
Confidence              244555566788888888777666654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=93.53  E-value=2.1  Score=38.29  Aligned_cols=120  Identities=8%  Similarity=0.023  Sum_probs=68.7

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc----eeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA----SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA----qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....|+++|++++.++.-..|+|.+||+.++.+++.++.-..+    +-.-+.+  .               ...+|..
T Consensus        84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~---------------~~~lyv~  146 (328)
T 3dsm_A           84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--Y---------------GKYVYVN  146 (328)
T ss_dssp             SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--E---------------TTEEEEE
T ss_pred             CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--E---------------CCEEEEE
Confidence            45678899999965444426799999999999999876533210    1111111  1               1122322


Q ss_pred             EEcC-CCCeEEEeecCCCCeEEEEEecCC--eEEeccCcc-cccccCC---CCCc--ccEEEEEeCCCCceE
Q 021797          238 IHAP-RKGIIEVWQMRTGPRLLTIQCAKG--SKILQPTYR-FGSSMAS---SPYV--PLEVFLLNGDSGQLS  300 (307)
Q Consensus       238 Iyap-rRg~lEVW~~~~G~RV~a~~v~~~--~~Ll~~~~~-~~~~~~~---~~~~--~~~~~ll~~~~g~l~  300 (307)
                        .. ..+.|.++++.++..+..+.++..  +..+.+..+ +.+++..   .+|.  ...++.||+.++++.
T Consensus       147 --~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~  216 (328)
T 3dsm_A          147 --CWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE  216 (328)
T ss_dssp             --ECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred             --cCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence              33 467899999999988888876542  112222111 1111110   1111  267888888888765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=93.37  E-value=0.38  Score=45.55  Aligned_cols=84  Identities=19%  Similarity=0.078  Sum_probs=56.2

Q ss_pred             ccCCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~-~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +..+...+.+|+.+|+ ++++|+....|.|.++|+.++..+...+|+++.    +....=.             ++.. +
T Consensus       145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~----v~~v~ws-------------pdg~-~  206 (434)
T 2oit_A          145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA----VTSVCWS-------------PKGK-Q  206 (434)
T ss_dssp             CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC----EEEEEEC-------------TTSS-C
T ss_pred             cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc----eeEEEEc-------------CCCC-E
Confidence            4445667899999997 789999889999999999999777666666542    2111100             0111 2


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~  260 (307)
                      |+ -+-.+|.|.||+++ |.....+
T Consensus       207 la-sgs~dg~v~iwd~~-~~~~~~~  229 (434)
T 2oit_A          207 LA-VGKQNGTVVQYLPT-LQEKKVI  229 (434)
T ss_dssp             EE-EEETTSCEEEECTT-CCEEEEE
T ss_pred             EE-EEcCCCcEEEEccC-Ccccccc
Confidence            33 34478999999998 5444443

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=93.37  E-value=0.64  Score=45.41  Aligned_cols=43  Identities=12%  Similarity=0.091  Sum_probs=33.4

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCC-----ceeEEeeccccc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQA-----LVVVRLWKGYRD  204 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~-----~~ivRmWKGyRD  204 (307)
                      ......++.||+|+++|.+. .+.|.++|+.+     +...++..+-..
T Consensus       120 ~~~~~~~~~SpdG~~la~~~-~~~i~v~~~~~~~~~~g~~~~~~~~~~~  167 (706)
T 2z3z_A          120 NEETASLDFSPVGDRVAYVR-NHNLYIARGGKLGEGMSRAIAVTIDGTE  167 (706)
T ss_dssp             TTCCTTCEECTTSSEEEEEE-TTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred             cccccCCcCCCCCCEEEEEE-CCeEEEEecCcccccCCCcEEeccCCCC
Confidence            34466789999998877763 38999999999     998887665443

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=93.26  E-value=1  Score=43.39  Aligned_cols=81  Identities=15%  Similarity=0.089  Sum_probs=56.9

Q ss_pred             EECCCCCEEEEEcC-----CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEE-EcC
Q 021797          168 TLSPSGSLAAITDS-----LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI-HAP  241 (307)
Q Consensus       168 ~lsP~~~lAavtDs-----lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI-yap  241 (307)
                      ...|+++++-++|.     .|+|.+||+.++.++..++.=+..  + +-+..+            +   ..+|..= |.+
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~-va~spD------------G---~~lyVan~~~~  100 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--N-PVVADD------------G---SFIAHASTVFS  100 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--E-EEECTT------------S---SCEEEEEEEEE
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--c-EEECCC------------C---CEEEEEccccc
Confidence            34688988888887     589999999999999999854444  2 332211            1   2333321 333


Q ss_pred             ------CCCeEEEeecCCCCeEEEEEecCCe
Q 021797          242 ------RKGIIEVWQMRTGPRLLTIQCAKGS  266 (307)
Q Consensus       242 ------rRg~lEVW~~~~G~RV~a~~v~~~~  266 (307)
                            +.+.|.|||+.++.-+..+.++.|.
T Consensus       101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~  131 (386)
T 3sjl_D          101 RIARGERTDYVEVFDPVTLLPTADIELPDAP  131 (386)
T ss_dssp             ETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred             ccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence                  3468999999999999999987643

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=93.24  E-value=0.5  Score=45.82  Aligned_cols=128  Identities=16%  Similarity=0.154  Sum_probs=70.8

Q ss_pred             CceeeEEEECCCCCEEEEEcCCC--cEEEEEcCCceeEEeecccccce-eeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWKGYRDAS-CVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslG--RV~LiD~~~~~ivRmWKGyRDAq-c~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      ......+..+|+|++++++|..|  +|.++|+.++...++..+..+.. ..|..     +.  ....-.+   +..  ++
T Consensus       241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~-----~~--~~~~~~~---~~~--~~  308 (662)
T 3azo_A          241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTP-----GM--RWFAPLA---NGL--IA  308 (662)
T ss_dssp             TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCST-----TC--CSEEECT---TSC--EE
T ss_pred             CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccc-----cC--ceEeEeC---CCE--EE
Confidence            45667889999999998888778  89999998888888776544321 11110     00  0000000   111  33


Q ss_pred             EEcCCCCeEEEeecCC-CCeEEEEEecCCeEEeccCcccccc----cCCCCCcccEEEEEeCCCCceEEEe
Q 021797          238 IHAPRKGIIEVWQMRT-GPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGDSGQLSVLN  303 (307)
Q Consensus       238 IyaprRg~lEVW~~~~-G~RV~a~~v~~~~~Ll~~~~~~~~~----~~~~~~~~~~~~ll~~~~g~l~~in  303 (307)
                      +.+-+ |..+||.+.. +.++..+....+..  ..-..+-+.    ..++.-.+.+++.+|.++|.++.+.
T Consensus       309 ~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~  376 (662)
T 3azo_A          309 VVHGK-GAAVLGILDPESGELVDAAGPWTEW--AATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG  376 (662)
T ss_dssp             EEEBS-SSCEEEEEETTTTEEEECCSSCCEE--EEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred             EEEEc-CccEEEEEECCCCcEEEecCCCCeE--EEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence            44445 8899994432 33455544332211  100011110    0122345678999999889888764

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=93.17  E-value=0.26  Score=46.73  Aligned_cols=74  Identities=11%  Similarity=0.082  Sum_probs=53.4

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc---------ceeeEEEEEecccccccccccCCCCC
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD---------ASCVFMEMLVNKDAATSSAYYAPVKS  230 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD---------Aqc~Wi~~~~~~~~~~~~~~~~~~k~  230 (307)
                      ....+.+++.+|+|+++|+....|.|.++|+. +...+..+....         ..+.|..                   
T Consensus       191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-------------------  250 (434)
T 2oit_A          191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-------------------  250 (434)
T ss_dssp             GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-------------------
T ss_pred             CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-------------------
Confidence            34568899999999999999999999999998 666666654432         2333431                   


Q ss_pred             CcceEEEEEcCCCCe------EEEeecCCC
Q 021797          231 DYCLCLAIHAPRKGI------IEVWQMRTG  254 (307)
Q Consensus       231 ~~~l~LVIyaprRg~------lEVW~~~~G  254 (307)
                       ...|++.|....|.      +.+|+++..
T Consensus       251 -~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          251 -TYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             -TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             -CceEEEEEccCCCccCCCCceEEEEeccC
Confidence             13478888877765      558888764

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=93.00  E-value=0.28  Score=51.33  Aligned_cols=45  Identities=9%  Similarity=0.065  Sum_probs=39.0

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      .......++.||+|+++|.+...++|.++|+.++.+.++.+++..
T Consensus       377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~  421 (1045)
T 1k32_A          377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA  421 (1045)
T ss_dssp             CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred             CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence            345577899999999999998999999999999999999877544

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=92.86  E-value=0.71  Score=45.29  Aligned_cols=46  Identities=15%  Similarity=0.172  Sum_probs=35.8

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYR  203 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyR  203 (307)
                      |.........++.||+|+++|.+.. +.|.++|+.++...++-.+..
T Consensus       147 l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~  192 (741)
T 2ecf_A          147 LTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS  192 (741)
T ss_dssp             CCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred             cccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence            3444566889999999987776542 599999999999999876543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=92.76  E-value=1.2  Score=43.46  Aligned_cols=39  Identities=21%  Similarity=0.081  Sum_probs=31.4

Q ss_pred             eeeEEEECCCCCEEEEEc---------------------------------CCCcEEEEEcCCceeEEeecc
Q 021797          163 KGERLTLSPSGSLAAITD---------------------------------SLGRILLLDTQALVVVRLWKG  201 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtD---------------------------------slGRV~LiD~~~~~ivRmWKG  201 (307)
                      +...++.||||+++|.+.                                 ..++|.++|+.++...++..+
T Consensus       182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~  253 (706)
T 2z3z_A          182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG  253 (706)
T ss_dssp             CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred             CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence            357899999998887763                                 457899999999998877644

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=92.73  E-value=0.9  Score=44.31  Aligned_cols=37  Identities=11%  Similarity=0.038  Sum_probs=30.6

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecc
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG  201 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKG  201 (307)
                      ...++.||+|+++|.+.. +.|.++|+.++...++-.+
T Consensus       116 ~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~  152 (723)
T 1xfd_A          116 LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVST  152 (723)
T ss_dssp             CSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECC
T ss_pred             ccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecC
Confidence            567899999976666544 8999999999999998775

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=92.48  E-value=0.082  Score=51.74  Aligned_cols=40  Identities=10%  Similarity=0.083  Sum_probs=34.2

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      ..+++.+|+|++++. +..|.|.++|+.++...++..+...
T Consensus        19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~   58 (723)
T 1xfd_A           19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKI   58 (723)
T ss_dssp             CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTT
T ss_pred             ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccc
Confidence            567788999998765 7789999999999999999988764

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=92.35  E-value=5.1  Score=34.73  Aligned_cols=45  Identities=16%  Similarity=0.188  Sum_probs=36.1

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEee
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW  199 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmW  199 (307)
                      ..+.+.....+.++.+|+|++.++.-..|+|.++|..++.+.++.
T Consensus        38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~   82 (333)
T 2dg1_A           38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF   82 (333)
T ss_dssp             EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred             EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence            346666667799999999997776656789999999999887765

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=92.34  E-value=3.5  Score=36.62  Aligned_cols=39  Identities=13%  Similarity=0.170  Sum_probs=31.5

Q ss_pred             ceeeEEEECCCCCEEEEEcCC------------------------CcEEEEEcCCceeEEeec
Q 021797          162 RKGERLTLSPSGSLAAITDSL------------------------GRILLLDTQALVVVRLWK  200 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDsl------------------------GRV~LiD~~~~~ivRmWK  200 (307)
                      .....|+++|+|++.++....                        |+|+++|..++.+++.|.
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~   86 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG   86 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC
Confidence            457889999999988654333                        479999999999998775

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=92.33  E-value=0.32  Score=47.82  Aligned_cols=84  Identities=7%  Similarity=0.012  Sum_probs=58.2

Q ss_pred             ccCCCceeeEE--EECCCC-CEEEEEcCCCcEEEEEcCCceeEEeeccccc-c---eeeEEEEEecccccccccccCCCC
Q 021797          157 LKDHPRKGERL--TLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRD-A---SCVFMEMLVNKDAATSSAYYAPVK  229 (307)
Q Consensus       157 l~D~~R~~~~I--~lsP~~-~lAavtDslGRV~LiD~~~~~ivRmWKGyRD-A---qc~Wi~~~~~~~~~~~~~~~~~~k  229 (307)
                      +.-+...+.+|  +-+|+| +++|++...|.|-|+|+.++..++...|+-. .   .++|-.                  
T Consensus       304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp------------------  365 (524)
T 2j04_B          304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP------------------  365 (524)
T ss_dssp             EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET------------------
T ss_pred             eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC------------------
Confidence            45556667888  357888 8999999999999999999888777776532 1   233321                  


Q ss_pred             CCcceEEEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          230 SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       230 ~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                       +..  .++-+-..+.|.+|+++++..+.++.
T Consensus       366 -~~~--~l~s~~~d~tv~lwd~~~~~~~~~l~  394 (524)
T 2j04_B          366 -QIY--SYIYSDGASSLRAVPSRAAFAVHPLV  394 (524)
T ss_dssp             -TTT--EEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred             -CcC--eEEEeCCCCcEEEEECcccccceeee
Confidence             111  23456678899999999988654443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=92.33  E-value=4  Score=36.48  Aligned_cols=81  Identities=12%  Similarity=0.111  Sum_probs=53.9

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      ..+.|+++ ++++.+++..-|+|.++|..++.+++.+++-.+  ..-+-+..+                .  .|.+-...
T Consensus        45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~--p~~i~~~~~----------------g--~lyv~~~~  103 (328)
T 3dsm_A           45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS--PRYIHFLSD----------------E--KAYVTQIW  103 (328)
T ss_dssp             CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS--EEEEEEEET----------------T--EEEEEEBS
T ss_pred             cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC--CcEEEEeCC----------------C--eEEEEECC
Confidence            34567775 456666666679999999999999988764322  222222111                1  23344445


Q ss_pred             CCeEEEeecCCCCeEEEEEecC
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      .+.|-+|+..++..+..+.++.
T Consensus       104 ~~~v~~iD~~t~~~~~~i~~g~  125 (328)
T 3dsm_A          104 DYRIFIINPKTYEITGYIECPD  125 (328)
T ss_dssp             CSEEEEEETTTTEEEEEEECTT
T ss_pred             CCeEEEEECCCCeEEEEEEcCC
Confidence            7899999999998888888776

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=92.25  E-value=0.97  Score=43.78  Aligned_cols=46  Identities=22%  Similarity=0.061  Sum_probs=33.5

Q ss_pred             cc-CCCceeeEEEECCCCCEEEEEc--C------CCcEEEEEcC-Cc---eeEEeeccc
Q 021797          157 LK-DHPRKGERLTLSPSGSLAAITD--S------LGRILLLDTQ-AL---VVVRLWKGY  202 (307)
Q Consensus       157 l~-D~~R~~~~I~lsP~~~lAavtD--s------lGRV~LiD~~-~~---~ivRmWKGy  202 (307)
                      |. +.......+..||||+++|.+.  .      ..+|.++|+. +|   ...++..+.
T Consensus       182 l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~  240 (662)
T 3azo_A          182 LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP  240 (662)
T ss_dssp             SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred             EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence            44 4456677889999998877643  2      2489999999 67   777777654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=92.23  E-value=2.2  Score=37.81  Aligned_cols=116  Identities=11%  Similarity=-0.034  Sum_probs=64.1

Q ss_pred             eeeEEEECCCCCEEEEE-cCCCcEEEEEcCCceeEEeeccccc--ceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          163 KGERLTLSPSGSLAAIT-DSLGRILLLDTQALVVVRLWKGYRD--ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavt-DslGRV~LiD~~~~~ivRmWKGyRD--Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      +..++...|+|+++++. +.-+||+.+|. .|.+++-|+--.+  .+..+..             ....-.+.. +||. 
T Consensus        78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~-------------~v~~~~~G~-~lv~-  141 (276)
T 3no2_A           78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFR-------------QINKNKKGN-YLVP-  141 (276)
T ss_dssp             EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCS-------------CCEECTTSC-EEEE-
T ss_pred             cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccccc-------------CceECCCCC-EEEE-
Confidence            45678899999887774 43899999996 7888877752111  0000000             000001111 3332 


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecCC--e-EEeccCcccccccCCCCCcccEEEEEeCCCCceE
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAKG--S-KILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLS  300 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~~--~-~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~  300 (307)
                      .-..|.|-+|+.. |+.+-.+..+..  + -.+..+..+...     .....++.||+++|++.
T Consensus       142 ~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~-----~~~~~v~~~d~~tG~~~  199 (276)
T 3no2_A          142 LFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVAC-----GDAHCFVQLNLESNRIV  199 (276)
T ss_dssp             ETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEC-----BTTSEEEEECTTTCCEE
T ss_pred             ecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEe-----CCCCeEEEEeCcCCcEE
Confidence            3356888888887 888888876421  1 111111111111     22356888898878764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=92.05  E-value=2  Score=37.74  Aligned_cols=42  Identities=12%  Similarity=0.129  Sum_probs=30.0

Q ss_pred             CCCceeeEEEECC-CCC-EEEEEcCC-----CcEEEEEcCCceeEEeec
Q 021797          159 DHPRKGERLTLSP-SGS-LAAITDSL-----GRILLLDTQALVVVRLWK  200 (307)
Q Consensus       159 D~~R~~~~I~lsP-~~~-lAavtDsl-----GRV~LiD~~~~~ivRmWK  200 (307)
                      +..+....+..+| +++ ++.+++.-     .+|.++|+..+.+..+..
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~  233 (396)
T 3c5m_A          185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE  233 (396)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC
T ss_pred             cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec
Confidence            4455677889999 776 55555432     489999998887766655

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=91.94  E-value=3.9  Score=36.16  Aligned_cols=39  Identities=3%  Similarity=-0.107  Sum_probs=31.9

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      +..++.++|+|++++.  ..++|..+|. +|.++.-++.-++
T Consensus        38 ~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~   76 (276)
T 3no2_A           38 ECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAG   76 (276)
T ss_dssp             CCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTT
T ss_pred             CCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCC
Confidence            4678899999998883  3578999999 8999999987543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=91.76  E-value=2.6  Score=42.09  Aligned_cols=50  Identities=18%  Similarity=0.259  Sum_probs=36.0

Q ss_pred             CceeeEEEECCCCCEEEE-EcCCC----cEEEEEcCCceeEEe-ecccccceeeEE
Q 021797          161 PRKGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVVRL-WKGYRDASCVFM  210 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAav-tDslG----RV~LiD~~~~~ivRm-WKGyRDAqc~Wi  210 (307)
                      ......+++||||+++|. .|.-|    .|.++|+.+|..+.. .++.+.....|.
T Consensus       128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws  183 (693)
T 3iuj_A          128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL  183 (693)
T ss_dssp             CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE
T ss_pred             cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe
Confidence            345677899999987775 56666    489999999998763 444444455664

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=91.67  E-value=0.84  Score=40.25  Aligned_cols=82  Identities=9%  Similarity=0.015  Sum_probs=55.7

Q ss_pred             ccCCCceeeEEEECC--CCCEEEEEcCCCcEEEEEcCCc--eeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          157 LKDHPRKGERLTLSP--SGSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP--~~~lAavtDslGRV~LiD~~~~--~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      |..+...+..|+.+|  +++++|+....|.|.|+|+.++  ..++..+|+.+. +.-+.....             . +.
T Consensus        53 l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~-V~~v~~~p~-------------~-~g  117 (316)
T 3bg1_A           53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSS-VNSVCWAPH-------------D-YG  117 (316)
T ss_dssp             EECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSC-CCEEEECCT-------------T-TC
T ss_pred             EcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCc-eEEEEECCC-------------C-CC
Confidence            555566788899986  4888888888999999999987  456677787652 111111000             0 01


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCC
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGP  255 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~  255 (307)
                        .+++-+-.+|.|.||+++.+.
T Consensus       118 --~~lasgs~D~~i~lwd~~~~~  138 (316)
T 3bg1_A          118 --LILACGSSDGAISLLTYTGEG  138 (316)
T ss_dssp             --SCEEEECSSSCEEEEEECSSS
T ss_pred             --cEEEEEcCCCCEEEEecCCCC
Confidence              134567789999999998764

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=91.60  E-value=3.4  Score=41.17  Aligned_cols=85  Identities=14%  Similarity=-0.078  Sum_probs=55.1

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcC--CceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQ--ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~--~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ...+.+||+|+++.+++..|.|.+||+.  ++.+++-.+.-.+..  =+.+..        .   +......+|..=|. 
T Consensus       199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~--~ia~s~--------~---~~pDGk~l~v~n~~-  264 (567)
T 1qks_A          199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR--SIETSK--------M---EGWEDKYAIAGAYW-  264 (567)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE--EEEECC--------S---TTCTTTEEEEEEEE-
T ss_pred             ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc--eeEEcc--------c---cCCCCCEEEEEEcc-
Confidence            4579999999999998889999999996  888876655322211  111110        0   00001233444444 


Q ss_pred             CCCeEEEeecCCCCeEEEEEec
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~  263 (307)
                       .+.|-|++..++..+..+.++
T Consensus       265 -~~~v~ViD~~t~~~~~~i~~~  285 (567)
T 1qks_A          265 -PPQYVIMDGETLEPKKIQSTR  285 (567)
T ss_dssp             -TTEEEEEETTTCCEEEEEECC
T ss_pred             -CCeEEEEECCCCcEEEEEecc
Confidence             488999999999988888764

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=91.39  E-value=0.38  Score=47.26  Aligned_cols=87  Identities=7%  Similarity=-0.104  Sum_probs=58.1

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCc-eeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL-VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~-~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      .|.-....+.+++.+|++ ++|+....|.|.|+|+.++ ..+..++|+.+    +|......-           .++.. 
T Consensus       261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~----~V~sv~~~~-----------s~~g~-  323 (524)
T 2j04_B          261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS----YILSVSTAY-----------SDFED-  323 (524)
T ss_dssp             EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS----CEEEEEEEC-----------CTTSC-
T ss_pred             EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc----cEEEEEEEc-----------CCCCC-
Confidence            344455678889999876 5677778899999999987 45566888876    443321000           01110 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEE
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLT  259 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a  259 (307)
                      .+++-+..+|.|.||+++++..+..
T Consensus       324 ~~laS~S~D~tvklWD~~~~~~~~~  348 (524)
T 2j04_B          324 TVVSTVAVDGYFYIFNPKDIATTKT  348 (524)
T ss_dssp             CEEEEEETTSEEEEECGGGHHHHCE
T ss_pred             eEEEEeccCCeEEEEECCCCCcccc
Confidence            2567888999999999987654433

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=91.31  E-value=1.9  Score=43.00  Aligned_cols=107  Identities=10%  Similarity=0.196  Sum_probs=65.9

Q ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEE
Q 021797          169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEV  248 (307)
Q Consensus       169 lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEV  248 (307)
                      .+|.+.++++.-..|+|.+||+.++.++...+.-...+  .+.+.  .              +....+|.  -+.|.|.+
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~--~v~~S--p--------------DGr~lyv~--~~dg~V~v  222 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH--ISRLS--A--------------SGRYLFVI--GRDGKVNM  222 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE--EEEEC--T--------------TSCEEEEE--ETTSEEEE
T ss_pred             cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc--ceEEC--C--------------CCCEEEEE--cCCCeEEE
Confidence            55666666666778999999999999998775322211  22221  1              11112232  36899999


Q ss_pred             eecC--CCCeEEEEEecCCeEEecc------Ccc--cccccCCCCCcccEEEEEeCCCCceE
Q 021797          249 WQMR--TGPRLLTIQCAKGSKILQP------TYR--FGSSMASSPYVPLEVFLLNGDSGQLS  300 (307)
Q Consensus       249 W~~~--~G~RV~a~~v~~~~~Ll~~------~~~--~~~~~~~~~~~~~~~~ll~~~~g~l~  300 (307)
                      |++.  ++..+..+.++.+-+-+.-      ..+  +.++     +.+.++.+||..++++.
T Consensus       223 iD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n-----~~~~~v~ViD~~t~~~~  279 (567)
T 1qks_A          223 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA-----YWPPQYVIMDGETLEPK  279 (567)
T ss_dssp             EETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEE-----EETTEEEEEETTTCCEE
T ss_pred             EECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEE-----ccCCeEEEEECCCCcEE
Confidence            9995  8888988887765432211      111  1112     55678888887665543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=91.14  E-value=2.4  Score=36.91  Aligned_cols=40  Identities=18%  Similarity=0.287  Sum_probs=30.2

Q ss_pred             eeeEEEECCCCCEEEEE-cC----CCcEEEEEcCCceeEEeeccc
Q 021797          163 KGERLTLSPSGSLAAIT-DS----LGRILLLDTQALVVVRLWKGY  202 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavt-Ds----lGRV~LiD~~~~~ivRmWKGy  202 (307)
                      ....+..||+|+++|.+ +.    -.+|.++|+.++...++..+-
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~  104 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK  104 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC
Confidence            45678999999877664 32    235999999999988887653

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=90.95  E-value=0.68  Score=44.51  Aligned_cols=66  Identities=17%  Similarity=0.094  Sum_probs=45.4

Q ss_pred             EECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEE
Q 021797          168 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE  247 (307)
Q Consensus       168 ~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lE  247 (307)
                      ..+.++.++|+....|.|-|+|+.+|..++..+|+.+.-+.-+... + |              ..  +++-+-.+|.|.
T Consensus       290 sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS-P-D--------------G~--~LaSGS~D~TIk  351 (356)
T 2w18_A          290 EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS-G-T--------------DS--HLLAGQKDGNIF  351 (356)
T ss_dssp             EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC-S-S--------------SS--EEEEECTTSCEE
T ss_pred             ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC-C-C--------------CC--EEEEEECCCcEE
Confidence            3333456788888889999999999999999999987432222111 1 1              11  345788999999


Q ss_pred             Eeec
Q 021797          248 VWQM  251 (307)
Q Consensus       248 VW~~  251 (307)
                      ||++
T Consensus       352 lWd~  355 (356)
T 2w18_A          352 VYHY  355 (356)
T ss_dssp             EEEE
T ss_pred             EecC
Confidence            9985

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=90.81  E-value=6.1  Score=33.89  Aligned_cols=45  Identities=13%  Similarity=-0.059  Sum_probs=35.6

Q ss_pred             ccccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCCceeEEeecc
Q 021797          155 TCLKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKG  201 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~-lAavtDslGRV~LiD~~~~~ivRmWKG  201 (307)
                      ..+.+...-.+.++.+|+|+ +.++.-..|+|..+|..++  ++.|..
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~   66 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH   66 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC
Confidence            44667778899999999998 6666556789999999998  666654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=90.10  E-value=7.4  Score=35.90  Aligned_cols=114  Identities=11%  Similarity=-0.007  Sum_probs=77.5

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      -++-|++.. +++-.++=.-++|.++|..++.+++-.+-  .. -+|=-+.+.                .  .|++-. .
T Consensus        97 FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~--~~-eGwGLt~Dg----------------~--~L~vSd-G  153 (268)
T 3nok_A           97 FAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRY--SG-EGWGLCYWN----------------G--KLVRSD-G  153 (268)
T ss_dssp             CEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEEC--SS-CCCCEEEET----------------T--EEEEEC-S
T ss_pred             ceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeC--CC-ceeEEecCC----------------C--EEEEEC-C
Confidence            356677764 46666776789999999999999998873  11 144333211                1  244555 4


Q ss_pred             CCeEEEeecCCCCeEEEEEecCCeEEec-------cCcccccccCCCCCcccEEEEEeCCCCceE-EEe
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAKGSKILQ-------PTYRFGSSMASSPYVPLEVFLLNGDSGQLS-VLN  303 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~~~~Ll~-------~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~-~in  303 (307)
                      .+.|-++|..++..+..+.|+.+++-+.       ....+..+    -|....+..|||.+|++. .|+
T Consensus       154 s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyan----vw~s~~I~vIDp~TG~V~~~Id  218 (268)
T 3nok_A          154 GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYAN----IWHSSDVLEIDPATGTVVGVID  218 (268)
T ss_dssp             SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE----ETTCSEEEEECTTTCBEEEEEE
T ss_pred             CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEE----ECCCCeEEEEeCCCCcEEEEEE
Confidence            8899999999999999999987554432       12222222    266789999999999874 554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=90.09  E-value=2.5  Score=41.91  Aligned_cols=35  Identities=11%  Similarity=-0.008  Sum_probs=28.0

Q ss_pred             ceeeEEEECCCCCEEEE-EcCCC----cEEEEEcCCceeE
Q 021797          162 RKGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVV  196 (307)
Q Consensus       162 R~~~~I~lsP~~~lAav-tDslG----RV~LiD~~~~~iv  196 (307)
                      .....+..||||+++|. .|.-|    .|.++|+.+|..+
T Consensus       121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~  160 (695)
T 2bkl_A          121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS  160 (695)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred             EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence            35778999999988775 45444    6999999999876

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=89.82  E-value=6.6  Score=36.43  Aligned_cols=86  Identities=8%  Similarity=-0.049  Sum_probs=52.1

Q ss_pred             EEEECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeecc--cccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          166 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKG--YRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWKG--yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      .|++||+|+++.++++          .+.|.+||+.++.++.-+.=  -+..+-    ....     ....-+   ++..
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~----g~~p-----~~~~~s---pDG~  137 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV----GPYS-----WMNANT---PNNA  137 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc----CCCc-----cceEEC---CCCC
Confidence            8999999999999875          35699999999988875521  011000    0000     000000   1111


Q ss_pred             eEEEEEcCC-CCeEEEeecCCCCeEEE-EEecCC
Q 021797          234 LCLAIHAPR-KGIIEVWQMRTGPRLLT-IQCAKG  265 (307)
Q Consensus       234 l~LVIyapr-Rg~lEVW~~~~G~RV~a-~~v~~~  265 (307)
                       +|.+..-. .+.|-|++ .+|..+.. +.++..
T Consensus       138 -~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~  169 (373)
T 2mad_H          138 -DLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC  169 (373)
T ss_pred             -EEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce
Confidence             34444433 57899999 99988888 776543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=89.70  E-value=3.1  Score=37.72  Aligned_cols=37  Identities=14%  Similarity=0.132  Sum_probs=28.6

Q ss_pred             CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE
Q 021797          160 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR  197 (307)
Q Consensus       160 ~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR  197 (307)
                      ....+.+|+.+|+|+++|++. .+.+.++|..++..+.
T Consensus       175 ~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~  211 (365)
T 4h5i_A          175 TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIA  211 (365)
T ss_dssp             CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEE
T ss_pred             CCCceEEEEEccCCceEEecc-ceeEEEEEeccCccee
Confidence            455688999999999988864 4678888888776553

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=89.47  E-value=1.8  Score=41.67  Aligned_cols=87  Identities=11%  Similarity=0.039  Sum_probs=56.2

Q ss_pred             EEEECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeec-c--ccccee----eEEEEEecccccccccccCCC
Q 021797          166 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWK-G--YRDASC----VFMEMLVNKDAATSSAYYAPV  228 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWK-G--yRDAqc----~Wi~~~~~~~~~~~~~~~~~~  228 (307)
                      .|.+||+|+++.++++          -+.|.+||+.++.+++-+. |  -| ++.    .-+.+.               
T Consensus        82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r-~~~g~~P~~~a~s---------------  145 (386)
T 3sjl_D           82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR-FLVGTYPWMTSLT---------------  145 (386)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC-CCBSCCGGGEEEC---------------
T ss_pred             cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc-cccCCCCceEEEc---------------
Confidence            4999999998888764          3569999999999998763 1  11 100    001110               


Q ss_pred             CCCcceEEEEEcC-CCCeEEEeecCCCCeEEEEEecCCeEEecc
Q 021797          229 KSDYCLCLAIHAP-RKGIIEVWQMRTGPRLLTIQCAKGSKILQP  271 (307)
Q Consensus       229 k~~~~l~LVIyap-rRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~  271 (307)
                       ++.. +|.+..- ..+.|-|+|+.++..+..+.++ +|-.+++
T Consensus       146 -pDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g~~~~~P  186 (386)
T 3sjl_D          146 -PDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-DCYHIFP  186 (386)
T ss_dssp             -TTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC-SEEEEEE
T ss_pred             -CCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECC-Ccceeec
Confidence             1111 3444443 3689999999999999999874 3444444

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=89.08  E-value=7.7  Score=35.25  Aligned_cols=117  Identities=11%  Similarity=-0.040  Sum_probs=77.4

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .-.++.++++ ++++.+++-.-++|.++|..++.+++..+ |- .--+|--..+.                ..||  +--
T Consensus        65 ~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~-~g-~~~g~glt~Dg----------------~~l~--vs~  123 (266)
T 2iwa_A           65 SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFT-HQ-MKDGWGLATDG----------------KILY--GSD  123 (266)
T ss_dssp             TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEE-CC-SSSCCEEEECS----------------SSEE--EEC
T ss_pred             CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEE-CC-CCCeEEEEECC----------------CEEE--EEC
Confidence            3455667776 35788888888999999999999999875 11 22355433211                1223  334


Q ss_pred             CCCCeEEEeecCCCCeEEEEEecCCeEEec-------cCcccccccCCCCCcccEEEEEeCCCCceE-EEe
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCAKGSKILQ-------PTYRFGSSMASSPYVPLEVFLLNGDSGQLS-VLN  303 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~~~~~Ll~-------~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~-~in  303 (307)
                       -.+.|-+.+..+...+..+.|+.+++-+.       ....+..+    -+...++..||+.+|++. .|+
T Consensus       124 -gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn----~~~~~~V~vID~~tg~V~~~I~  189 (266)
T 2iwa_A          124 -GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN----IWQTDCIARISAKDGTLLGWIL  189 (266)
T ss_dssp             -SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE----ETTSSEEEEEETTTCCEEEEEE
T ss_pred             -CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe----cCCCCeEEEEECCCCcEEEEEE
Confidence             47899999999999999999987544321       11111111    145679999999999764 554

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=88.60  E-value=3.8  Score=38.09  Aligned_cols=85  Identities=8%  Similarity=0.023  Sum_probs=55.0

Q ss_pred             EEEECCCCCEEEE-EcC---------CCcEEEEEcCCceeEEeecccc-cceeeEEEEEecccccccccccCCCCCCcce
Q 021797          166 RLTLSPSGSLAAI-TDS---------LGRILLLDTQALVVVRLWKGYR-DASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       166 ~I~lsP~~~lAav-tDs---------lGRV~LiD~~~~~ivRmWKGyR-DAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      -+.++|+++.+-+ .++         -+.|.+||+.++.+++-++.=. -..++|-                   ++...
T Consensus       271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s-------------------~Dg~~  331 (373)
T 2mad_H          271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVA-------------------QDGGP  331 (373)
T ss_pred             eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEEC-------------------CCCCe
Confidence            3788998764444 332         3689999999999999876432 2222221                   11111


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEE-EEecCCeEEe
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLT-IQCAKGSKIL  269 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a-~~v~~~~~Ll  269 (307)
                      .|++-.-..+.|-|+|+.+++.+.. +.+|++-..|
T Consensus       332 ~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~  367 (373)
T 2mad_H          332 DLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVL  367 (373)
T ss_pred             EEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEE
Confidence            2333333469999999999999998 6788764444

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=88.37  E-value=2  Score=38.63  Aligned_cols=35  Identities=11%  Similarity=0.040  Sum_probs=26.9

Q ss_pred             eeeEEE-ECCCCCEEEEEcCCC------cEEEEEcC-CceeEE
Q 021797          163 KGERLT-LSPSGSLAAITDSLG------RILLLDTQ-ALVVVR  197 (307)
Q Consensus       163 ~~~~I~-lsP~~~lAavtDslG------RV~LiD~~-~~~ivR  197 (307)
                      ....|+ +||+|+++++++..+      +|.++|+. +|.+.+
T Consensus       255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~  297 (365)
T 1jof_A          255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK  297 (365)
T ss_dssp             EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred             ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence            467899 999999887775433      89999986 676554

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=88.30  E-value=2  Score=37.69  Aligned_cols=79  Identities=13%  Similarity=0.026  Sum_probs=50.4

Q ss_pred             eeEEEECCCCCEEEEE-cC--CCcEEEEEcCCceeEEeecccccce--eeEEEEEecccccccccccCCCCCCcceEEEE
Q 021797          164 GERLTLSPSGSLAAIT-DS--LGRILLLDTQALVVVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI  238 (307)
Q Consensus       164 ~~~I~lsP~~~lAavt-Ds--lGRV~LiD~~~~~ivRmWKGyRDAq--c~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVI  238 (307)
                      ...+++||+|+++|.+ +.  ..+|.++|+.++...++-.+.....  +.|-                   ++..  .++
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s-------------------pdg~--~l~   96 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS-------------------TDER--AFF   96 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEEC-------------------TTSS--EEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceEC-------------------CCCC--EEE
Confidence            4457899999886664 43  3479999999999877765543211  2221                   1111  234


Q ss_pred             EcCCCCeEEEeecCCCCeEEEEEec
Q 021797          239 HAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       239 yaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      |.-.++.|-+|++.+|.........
T Consensus        97 ~~~~~~~l~~~d~~~~~~~~~~~~~  121 (396)
T 3c5m_A           97 YVKNELNLMKVDLETLEEQVIYTVD  121 (396)
T ss_dssp             EEETTTEEEEEETTTCCEEEEEECC
T ss_pred             EEEcCCcEEEEECCCCCcEEEEecc
Confidence            5556678999999988765555543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=88.28  E-value=0.65  Score=45.61  Aligned_cols=38  Identities=5%  Similarity=-0.076  Sum_probs=31.5

Q ss_pred             EEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          166 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       166 ~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      ++..+|+|++++.+ ..|.|.++|+.++...++..+...
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~   57 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM   57 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc
Confidence            56788999876655 579999999999999999887654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=88.24  E-value=4.7  Score=38.47  Aligned_cols=38  Identities=13%  Similarity=-0.004  Sum_probs=29.1

Q ss_pred             EEEECCCCC-EEEEEcCCCcEEEEEcCCceeEEeecccc
Q 021797          166 RLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKGYR  203 (307)
Q Consensus       166 ~I~lsP~~~-lAavtDslGRV~LiD~~~~~ivRmWKGyR  203 (307)
                      ..+++|+|+ ++.++.+.+.+.|+|+.++...++..+-.
T Consensus       114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~  152 (582)
T 3o4h_A          114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG  152 (582)
T ss_dssp             EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS
T ss_pred             eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC
Confidence            557888874 45566777888899999999988876543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=88.20  E-value=8.1  Score=33.09  Aligned_cols=37  Identities=19%  Similarity=0.114  Sum_probs=28.0

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcC-CCcEEEEEcC-Ccee
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDS-LGRILLLDTQ-ALVV  195 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDs-lGRV~LiD~~-~~~i  195 (307)
                      .+.......|+++|+|++. ++|+ .++|.++|+. .|.+
T Consensus       168 ~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~  206 (296)
T 3e5z_A          168 IRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGET  206 (296)
T ss_dssp             ECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCE
T ss_pred             ecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcC
Confidence            3444456789999999988 7665 5899999997 5655

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=88.09  E-value=1.6  Score=39.95  Aligned_cols=84  Identities=8%  Similarity=0.030  Sum_probs=49.7

Q ss_pred             EEEECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeeccc-ccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          166 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKGY-RDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWKGy-RDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      .|+++|+|+++.+++.          .+.|.+||+.++.+++-.+-- ..++-+         .......-+   ++.. 
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g---------~~p~~i~~s---pdg~-  120 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL---------NYDGLFRQT---TDGK-  120 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC---------CCGGGEEEC---TTSS-
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC---------CCcceEEEC---CCCC-
Confidence            8999999998888763          456999999999888765421 100000         000000000   1111 


Q ss_pred             EEEEEcC-CCCeEEEeecCCCCeEEE-EEe
Q 021797          235 CLAIHAP-RKGIIEVWQMRTGPRLLT-IQC  262 (307)
Q Consensus       235 ~LVIyap-rRg~lEVW~~~~G~RV~a-~~v  262 (307)
                      +|++-.- ..+.|-||++.++..+.. +.+
T Consensus       121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~  150 (361)
T 2oiz_A          121 FIVLQNASPATSIGIVDVAKGDYVEDVTAA  150 (361)
T ss_dssp             EEEEEEESSSEEEEEEETTTTEEEEEEGGG
T ss_pred             EEEEECCCCCCeEEEEECCCCcEEEEEecC
Confidence            3434332 258899999999877776 443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=87.20  E-value=2.6  Score=41.91  Aligned_cols=81  Identities=16%  Similarity=0.261  Sum_probs=51.9

Q ss_pred             eeeEEEECCCCCEEEEEcCC------CcEEEEEcCCceeEEeecccccc-eee---EEEEEecccccccccccCCCCCCc
Q 021797          163 KGERLTLSPSGSLAAITDSL------GRILLLDTQALVVVRLWKGYRDA-SCV---FMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDsl------GRV~LiD~~~~~ivRmWKGyRDA-qc~---Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      .-..+.++|+| +.+.+..-      |+|+++|..++.+++-|+-=|+. .++   |++  ...                
T Consensus       139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~--p~~----------------  199 (462)
T 2ece_A          139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWN--LPN----------------  199 (462)
T ss_dssp             EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEE--TTT----------------
T ss_pred             cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEEC--CCC----------------
Confidence            34567888999 55544332      89999999999999999832332 333   222  000                


Q ss_pred             ceEEEEEc------------------CCCCeEEEeecCCCCeEEEEEec
Q 021797          233 CLCLAIHA------------------PRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       233 ~l~LVIya------------------prRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      - .++.--                  ...+.|-||++.++..+.++.++
T Consensus       200 ~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg  247 (462)
T 2ece_A          200 E-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG  247 (462)
T ss_dssp             T-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred             C-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence            0 111110                  24678889999888888888886

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=86.68  E-value=4.8  Score=39.88  Aligned_cols=36  Identities=14%  Similarity=0.103  Sum_probs=29.4

Q ss_pred             eeeEEEECCCCCEEEE-EcCCC----cEEEEEcCCceeEEe
Q 021797          163 KGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVVRL  198 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslG----RV~LiD~~~~~ivRm  198 (307)
                      ....++.||||+++|. .|.-|    .|.++|+.+|..++.
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~  166 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD  166 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc
Confidence            4678999999988776 45555    799999999998874

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=86.55  E-value=13  Score=31.39  Aligned_cols=38  Identities=8%  Similarity=0.099  Sum_probs=30.3

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeec
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK  200 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK  200 (307)
                      .....|+++|+|++.++....|+|.++|.. +..++.+.
T Consensus        30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~   67 (286)
T 1q7f_A           30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFG   67 (286)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEEC
T ss_pred             CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEec
Confidence            346789999999987776677999999987 66667664

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=86.29  E-value=8.8  Score=38.39  Aligned_cols=36  Identities=14%  Similarity=0.058  Sum_probs=28.9

Q ss_pred             eeeEEEECCCCCEEEE-EcCCCc----EEEEEcCCceeEEe
Q 021797          163 KGERLTLSPSGSLAAI-TDSLGR----ILLLDTQALVVVRL  198 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslGR----V~LiD~~~~~ivRm  198 (307)
                      ....+..||||+++|. .|.-|.    |.++|+.+|..++.
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~  204 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD  204 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc
Confidence            5678999999987776 465565    99999999998764

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=86.00  E-value=17  Score=32.85  Aligned_cols=114  Identities=11%  Similarity=0.072  Sum_probs=78.1

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      -++.|++. ++++-.++=.-+++.++|..++.+++-.+- -  --+|=-+...                ..  |++-- .
T Consensus        66 fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~--~~Gwglt~dg----------------~~--L~vSd-g  122 (243)
T 3mbr_X           66 FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRY-P--GEGWALTSDD----------------SH--LYMSD-G  122 (243)
T ss_dssp             CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEEC-S--SCCCEEEECS----------------SC--EEEEC-S
T ss_pred             ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeC-C--CCceEEeeCC----------------CE--EEEEC-C
Confidence            34555555 467788887889999999999999998873 1  1356544221                12  44544 3


Q ss_pred             CCeEEEeecCCCCeEEEEEecCCeEEec-------cCcccccccCCCCCcccEEEEEeCCCCceE-EEe
Q 021797          243 KGIIEVWQMRTGPRLLTIQCAKGSKILQ-------PTYRFGSSMASSPYVPLEVFLLNGDSGQLS-VLN  303 (307)
Q Consensus       243 Rg~lEVW~~~~G~RV~a~~v~~~~~Ll~-------~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~-~in  303 (307)
                      .+.|-++|..++..+..+.|+.+++-+.       ....+..+    -|..+.+..|||.+|.+. .|+
T Consensus       123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan----vw~s~~I~vIDp~tG~V~~~id  187 (243)
T 3mbr_X          123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN----VWLTSRIARIDPASGKVVAWID  187 (243)
T ss_dssp             SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE----ETTTTEEEEECTTTCBEEEEEE
T ss_pred             CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE----ECCCCeEEEEECCCCCEEEEEE
Confidence            7889999999999999999986544332       12222222    266789999999999875 554

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=85.47  E-value=15  Score=30.63  Aligned_cols=37  Identities=11%  Similarity=0.050  Sum_probs=30.1

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEe
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL  198 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRm  198 (307)
                      ......|+.+|+|++.+++..-|+|..+|.. +.+.+.
T Consensus        14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~   50 (299)
T 2z2n_A           14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY   50 (299)
T ss_dssp             SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE
T ss_pred             CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe
Confidence            3467899999999988887778999999998 665543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=85.26  E-value=15  Score=31.10  Aligned_cols=38  Identities=13%  Similarity=0.100  Sum_probs=28.5

Q ss_pred             eeeEEEECCCCCEEEEEcCC---------------CcEEEEEcCCceeEEeecc
Q 021797          163 KGERLTLSPSGSLAAITDSL---------------GRILLLDTQALVVVRLWKG  201 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDsl---------------GRV~LiD~~~~~ivRmWKG  201 (307)
                      ....|+++|+|++.+++...               |+|..+|.. +.+.++..+
T Consensus       118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~  170 (314)
T 1pjx_A          118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA  170 (314)
T ss_dssp             CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred             CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence            45689999999987776543               799999987 766665443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=84.87  E-value=6.6  Score=37.99  Aligned_cols=87  Identities=8%  Similarity=-0.046  Sum_probs=54.6

Q ss_pred             EEEECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeec-c-cccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          166 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWK-G-YRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWK-G-yRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      .|.+||+|+++.+++.          -+.|.+||+.++.+++-.+ | -+..+.+     .  .  .....-.   ++..
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g-----~--~--P~~~~~s---pDGk  189 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG-----T--Y--QWMNALT---PDNK  189 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS-----C--C--GGGSEEC---TTSS
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC-----C--C--cceEEEc---CCCC
Confidence            7999999998888874          4689999999999987543 1 1110000     0  0  0000000   1111


Q ss_pred             eEEEEEc-CCCCeEEEeecCCCCeEEEEEecCC
Q 021797          234 LCLAIHA-PRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       234 l~LVIya-prRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                       +|.+-. ...+.|-|.|+.++..+..+.++..
T Consensus       190 -~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~  221 (426)
T 3c75_H          190 -NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC  221 (426)
T ss_dssp             -EEEEEECSSSCEEEEEETTTTEEEEEEECCSE
T ss_pred             -EEEEEecCCCCeEEEEECCCCeEEEEEEcCCc
Confidence             333433 2368899999999999999998653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=84.71  E-value=24  Score=32.30  Aligned_cols=111  Identities=14%  Similarity=0.034  Sum_probs=68.8

Q ss_pred             eeEEEECCCCCEEEEEcCCC--cEEEEEcCCceeEEeecccccceeeEEE-EEecccccccccccCCCCCCcceEEEEEc
Q 021797          164 GERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWKGYRDASCVFME-MLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslG--RV~LiD~~~~~ivRmWKGyRDAqc~Wi~-~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .+-|..+ +++|-..+=..|  +|..+|+.+|.+++-.+-=.+  . |-+ +...              . ..||  +-.
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--~-FgeGit~~--------------g-~~ly--~lt  103 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--Y-FGEGISDW--------------K-DKIV--GLT  103 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--C-CEEEEEEE--------------T-TEEE--EEE
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--c-ceeEEEEe--------------C-CEEE--EEE
Confidence            4667777 678777775545  999999999999987742111  0 111 1100              1 1334  335


Q ss_pred             CCCCeEEEeecCCCCeEEEEEecCCeE-EeccCcccccccCCCCCcccEEEEEeCCCCceE
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCAKGSK-ILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLS  300 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~~~~~-Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~  300 (307)
                      =+.+.+-|+|.+++..+..|.++..+- |-..+..+.-   +..  ..++.+|||.+.++.
T Consensus       104 w~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~---SdG--s~~i~~iDp~T~~v~  159 (262)
T 3nol_A          104 WKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIM---SDG--TPVLRFLDPESLTPV  159 (262)
T ss_dssp             SSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEE---CCS--SSEEEEECTTTCSEE
T ss_pred             eeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEE---ECC--CCeEEEEcCCCCeEE
Confidence            578999999999999999999865332 2222222111   111  367888888776543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=84.63  E-value=9.4  Score=39.02  Aligned_cols=127  Identities=12%  Similarity=0.139  Sum_probs=74.0

Q ss_pred             ceeeEEEECCCCCEEEEEc-CCCcEEEEEcCCceeEEeecc---cccceeeEEEEEecccccccccccCCC----CCCcc
Q 021797          162 RKGERLTLSPSGSLAAITD-SLGRILLLDTQALVVVRLWKG---YRDASCVFMEMLVNKDAATSSAYYAPV----KSDYC  233 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtD-slGRV~LiD~~~~~ivRmWKG---yRDAqc~Wi~~~~~~~~~~~~~~~~~~----k~~~~  233 (307)
                      ..-..+.+||||+++.++| ...+|.++|+.+...+  .+|   +|++-.+=++   .+        ..|.    .++..
T Consensus       277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~~l~~~~~v~~~v~---vG--------~gP~h~aF~~dG~  343 (595)
T 1fwx_A          277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYENADPRSAVVAEPE---LG--------LGPLHTAFDGRGN  343 (595)
T ss_dssp             SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHSCCCGGGGEEECCB---CC--------SCEEEEEECTTSE
T ss_pred             CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--cccccCcccceEEEcC---CC--------CCcceEEECCCCe
Confidence            3567799999999999997 5689999999976421  111   2221111000   00        0000    01122


Q ss_pred             eEEEEEcCCCCeEEEeecCC----------CCeEEEEEec---------------CCeEEeccCccccccc--CCCCCcc
Q 021797          234 LCLAIHAPRKGIIEVWQMRT----------GPRLLTIQCA---------------KGSKILQPTYRFGSSM--ASSPYVP  286 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~----------G~RV~a~~v~---------------~~~~Ll~~~~~~~~~~--~~~~~~~  286 (307)
                      +|+.  .=..+.|.+|++..          .+.|..+.|.               +.++-|+...++--.+  .--+.+|
T Consensus       344 aY~t--~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~  421 (595)
T 1fwx_A          344 AYTS--LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKP  421 (595)
T ss_dssp             EEEE--ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCC
T ss_pred             EEEE--EecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCC
Confidence            3433  33468899999988          6788888875               3344444433332210  0113677


Q ss_pred             cEEEEEeCCCCceEEEe
Q 021797          287 LEVFLLNGDSGQLSVLN  303 (307)
Q Consensus       287 ~~~~ll~~~~g~l~~in  303 (307)
                      ..--|||-++|.++.+-
T Consensus       422 ~~~ql~dis~~~m~lv~  438 (595)
T 1fwx_A          422 ENDQLIDISGDKMVLVH  438 (595)
T ss_dssp             EEEEEEECSSSSCEEEE
T ss_pred             CcceEEEcCCCcEEEEE
Confidence            66678888888888774

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=84.50  E-value=10  Score=34.72  Aligned_cols=113  Identities=11%  Similarity=0.102  Sum_probs=74.7

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK  243 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprR  243 (307)
                      ++-|++. ++++-.++-.-++|.++|..++.+++-.+= -  --+|=-+.+.                ..  |++-.. .
T Consensus        89 geGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~--~eG~glt~dg----------------~~--L~~SdG-s  145 (262)
T 3nol_A           89 GEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-D--GEGWGLTHND----------------QY--LIMSDG-T  145 (262)
T ss_dssp             EEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEEC-S--SCCCCEEECS----------------SC--EEECCS-S
T ss_pred             eeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEEC-C--CCceEEecCC----------------CE--EEEECC-C
Confidence            4556655 347777787789999999999999998762 1  1234322211                11  444443 6


Q ss_pred             CeEEEeecCCCCeEEEEEecCCeEEe-------ccCcccccccCCCCCcccEEEEEeCCCCceE-EEe
Q 021797          244 GIIEVWQMRTGPRLLTIQCAKGSKIL-------QPTYRFGSSMASSPYVPLEVFLLNGDSGQLS-VLN  303 (307)
Q Consensus       244 g~lEVW~~~~G~RV~a~~v~~~~~Ll-------~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~-~in  303 (307)
                      +.|-++|..++..+..+.|+.+++-+       +....+..+    -|....+..|||.+|.+. .|+
T Consensus       146 ~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan----~w~~~~I~vIDp~tG~V~~~Id  209 (262)
T 3nol_A          146 PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFAN----VWQTNKIVRIDPETGKVTGIID  209 (262)
T ss_dssp             SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEE----ETTSSEEEEECTTTCBEEEEEE
T ss_pred             CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEE----EccCCeEEEEECCCCcEEEEEE
Confidence            78999999999999999997544332       222222221    266789999999999875 554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=84.40  E-value=8.8  Score=37.98  Aligned_cols=114  Identities=13%  Similarity=0.072  Sum_probs=62.1

Q ss_pred             CCCCEEEEEc---CCCcEEEEEcCCcee---EEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          171 PSGSLAAITD---SLGRILLLDTQALVV---VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       171 P~~~lAavtD---slGRV~LiD~~~~~i---vRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      |+|+++..+|   ..++|+++|+.++..   ..+..+.-+..+.++... .                .  .|++..-++|
T Consensus       280 ~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~----------------~--~lv~~~~~dg  340 (695)
T 2bkl_A          280 WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G----------------G--HLSLEYLKDA  340 (695)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T----------------T--EEEEEEEETT
T ss_pred             cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C----------------C--EEEEEEEECC
Confidence            6666666676   368999999988753   333333223333333321 0                1  3556666788


Q ss_pred             eEEEeecC-CCCeEEEEEecCCeEEeccCcccccc----cCCCCCcccEEEEEeCCCCceEEEe
Q 021797          245 IIEVWQMR-TGPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGDSGQLSVLN  303 (307)
Q Consensus       245 ~lEVW~~~-~G~RV~a~~v~~~~~Ll~~~~~~~~~----~~~~~~~~~~~~ll~~~~g~l~~in  303 (307)
                      ..+||.+. .|..+..+..+..+.+......--+.    ..++.-.|..++++|..+|.++.+.
T Consensus       341 ~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~  404 (695)
T 2bkl_A          341 TSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA  404 (695)
T ss_dssp             EEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred             EEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence            88888765 46655555443222222111111110    0123355688999999888877653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=84.37  E-value=1.5  Score=39.82  Aligned_cols=49  Identities=16%  Similarity=0.123  Sum_probs=40.4

Q ss_pred             ccCCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCCceeEEee--cccccce
Q 021797          157 LKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLW--KGYRDAS  206 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~-~~lAavtDslGRV~LiD~~~~~ivRmW--KGyRDAq  206 (307)
                      |+....+..-|+.+|+ ++|.|++|.-++|+-||+. |.++|-+  .|+.|.+
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~E   73 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLE   73 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEE
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChH
Confidence            3444457889999995 6899999999999999999 8899877  6777755

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=84.21  E-value=14  Score=36.45  Aligned_cols=118  Identities=11%  Similarity=0.100  Sum_probs=63.1

Q ss_pred             EECCCCCEEEE-EcC---CCcEEEEEcCCcee--EEeeccccc-ceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          168 TLSPSGSLAAI-TDS---LGRILLLDTQALVV--VRLWKGYRD-ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       168 ~lsP~~~lAav-tDs---lGRV~LiD~~~~~i--vRmWKGyRD-Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .++|+|+.+++ ++.   .++|+++|+.++..  ++..-..++ ..+..+... +               +.  .|++..
T Consensus       292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~---------------~~--~lv~~~  353 (710)
T 2xdw_A          292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-R---------------SN--FLVLCY  353 (710)
T ss_dssp             EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-T---------------TT--EEEEEE
T ss_pred             EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-c---------------CC--EEEEEE
Confidence            57888765554 543   45899999988742  222223333 223222221 1               01  244555


Q ss_pred             CCCC--eEEEeecCCCCeEEEEEecCCeEEeccCcccccc----cCCCCCcccEEEEEeCCCCc--eEEEec
Q 021797          241 PRKG--IIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGDSGQ--LSVLNR  304 (307)
Q Consensus       241 prRg--~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~----~~~~~~~~~~~~ll~~~~g~--l~~in~  304 (307)
                      -++|  .|.+|++.+|..+..+..+.+. +......--+.    ..++.-.|.+++++|..+|.  ++.++.
T Consensus       354 ~~~g~~~l~~~~~~~g~~~~~l~~~~~~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~  424 (710)
T 2xdw_A          354 LHDVKNTLQLHDLATGALLKIFPLEVGS-VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFRE  424 (710)
T ss_dssp             EETTEEEEEEEETTTCCEEEEECCCSSE-EEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEE
T ss_pred             EECCEEEEEEEECCCCCEEEecCCCCce-EEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeee
Confidence            5566  4566777778877666655332 21111111110    11344667899999998888  666553

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=82.90  E-value=2.2  Score=41.78  Aligned_cols=32  Identities=13%  Similarity=0.160  Sum_probs=27.8

Q ss_pred             eeEEEECCCCCEEEEEcC---------CCcEEEEEcCCcee
Q 021797          164 GERLTLSPSGSLAAITDS---------LGRILLLDTQALVV  195 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDs---------lGRV~LiD~~~~~i  195 (307)
                      ..+++.||||+++|.+.+         .|.|.++|+.++..
T Consensus        62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~  102 (719)
T 1z68_A           62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF  102 (719)
T ss_dssp             CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred             eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence            678999999998887644         68999999999988

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=82.46  E-value=11  Score=37.66  Aligned_cols=114  Identities=13%  Similarity=0.037  Sum_probs=63.3

Q ss_pred             ECCCCCEEEE-EcC---CCcEEEEEcCCc--eeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCC
Q 021797          169 LSPSGSLAAI-TDS---LGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR  242 (307)
Q Consensus       169 lsP~~~lAav-tDs---lGRV~LiD~~~~--~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyapr  242 (307)
                      ++|+|+.+++ ++.   .++|+++|+.++  ....+..+..+ .+.++...  .               .  .|++..-+
T Consensus       323 ~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~--~---------------~--~lv~~~~~  382 (741)
T 1yr2_A          323 VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIA--G---------------N--RLFASYIH  382 (741)
T ss_dssp             EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEE--B---------------T--EEEEEEEE
T ss_pred             EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEE--C---------------C--EEEEEEEE
Confidence            4687765544 543   568999999884  45556655433 33333221  0               1  35666667


Q ss_pred             CCeEEEeecC-CCCeEEEEEecCCeEEeccCcccccc----cCCCCCcccEEEEEeCCCCceEEE
Q 021797          243 KGIIEVWQMR-TGPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGDSGQLSVL  302 (307)
Q Consensus       243 Rg~lEVW~~~-~G~RV~a~~v~~~~~Ll~~~~~~~~~----~~~~~~~~~~~~ll~~~~g~l~~i  302 (307)
                      +|..+||.+. .|..+..+..+..+.........-+.    ..++.-.|.+++++|..+|.++.+
T Consensus       383 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l  447 (741)
T 1yr2_A          383 DAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW  447 (741)
T ss_dssp             TTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred             CCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence            7887777665 46666555543222221111111110    012335678999999988887665

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=81.96  E-value=13  Score=35.04  Aligned_cols=63  Identities=14%  Similarity=0.011  Sum_probs=43.7

Q ss_pred             cEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc-------CCCCeEEEeecCCCCe
Q 021797          184 RILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA-------PRKGIIEVWQMRTGPR  256 (307)
Q Consensus       184 RV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya-------prRg~lEVW~~~~G~R  256 (307)
                      +|.+||..++.+++.+..=+.-  + +..  ..|             .+.+|..=+.       .+.+.|.|||+.++..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~-i~~--spD-------------g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v  108 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--L-AVA--GHS-------------GSDFALASTSFARSAKGKRTDYVEVFDPVTFLP  108 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--E-EEE--CTT-------------SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--c-eEE--CCC-------------CCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence            9999999999999998644443  2 211  111             1233433321       3568899999999999


Q ss_pred             EEEEEecC
Q 021797          257 LLTIQCAK  264 (307)
Q Consensus       257 V~a~~v~~  264 (307)
                      +..+.++.
T Consensus       109 v~~I~v~~  116 (368)
T 1mda_H          109 IADIELPD  116 (368)
T ss_dssp             EEEEEETT
T ss_pred             EEEEECCC
Confidence            99999873

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=81.60  E-value=3.9  Score=39.65  Aligned_cols=86  Identities=10%  Similarity=0.094  Sum_probs=56.2

Q ss_pred             EEEECCCCCEEEEEcC----------CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          166 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       166 ~I~lsP~~~lAavtDs----------lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+.++|+++.+-+++.          -+.|.+||+.++.+++-|+.=+.   .|--...               ++....
T Consensus       323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~---P~gia~s---------------pDg~~~  384 (426)
T 3c75_H          323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE---IDSINVS---------------QDAEPL  384 (426)
T ss_dssp             CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECEEEEC---------------CSSSCE
T ss_pred             eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC---cCeEEEc---------------cCCCEE
Confidence            3789998765555432          35799999999999998853221   1111111               111112


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEE-EecCCeEEe
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTI-QCAKGSKIL  269 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~-~v~~~~~Ll  269 (307)
                      |++---..|.|-|+|+.++.-+..+ .++++-.++
T Consensus       385 lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i  419 (426)
T 3c75_H          385 LYALSAGTQTLHIYDAATGEELRSVDQLGRGPQII  419 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEE
T ss_pred             EEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEE
Confidence            3333334799999999999999998 788775554

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=81.42  E-value=12  Score=38.94  Aligned_cols=119  Identities=13%  Similarity=0.053  Sum_probs=65.1

Q ss_pred             eeeEEEECCCCCEEEE-EcCCCcEE-EEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          163 KGERLTLSPSGSLAAI-TDSLGRIL-LLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDslGRV~-LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      ....++.+ +|+.++. +| -++|. ++|+.++.+.++- +.. ..+..+....                +..  .++++
T Consensus       339 ~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~-~~~-~~~~~~~~Sp----------------DG~--~la~~  396 (1045)
T 1k32_A          339 RYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE-ENL-GNVFAMGVDR----------------NGK--FAVVA  396 (1045)
T ss_dssp             EEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC-CCC-CSEEEEEECT----------------TSS--EEEEE
T ss_pred             eEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec-CCc-cceeeeEECC----------------CCC--EEEEE
Confidence            55667777 7765555 55 78899 9999998876665 432 2222222111                111  23466


Q ss_pred             CCCCeEEEeecCCCCeEEEEEecCC---eEEeccCccccc-ccCCC-----CCcccEEEEEeCCCCceEEEe
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCAKG---SKILQPTYRFGS-SMASS-----PYVPLEVFLLNGDSGQLSVLN  303 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~~~---~~Ll~~~~~~~~-~~~~~-----~~~~~~~~ll~~~~g~l~~in  303 (307)
                      -.++.|.+|++.+|..........+   +--+.+..+.+- .....     .....++++.|..+|.+..+.
T Consensus       397 ~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~  468 (1045)
T 1k32_A          397 NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT  468 (1045)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred             CCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence            7789999999999887655432211   111222222111 10000     123467888888777765554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=81.33  E-value=4.5  Score=38.20  Aligned_cols=79  Identities=6%  Similarity=-0.054  Sum_probs=53.2

Q ss_pred             EEECCCCCEEEEEcC---------CCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          167 LTLSPSGSLAAITDS---------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       167 I~lsP~~~lAavtDs---------lGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      +.++|+++.+-++..         -+.+.+||+.++.+++-++.=..  .-=|.+..+            +   ..+   
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~--p~gi~~s~D------------g---~~l---  328 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD--SDAIIAAQD------------G---ASD---  328 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE--ECEEEECCS------------S---SCE---
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC--cceEEECCC------------C---CEE---
Confidence            789999876665432         24788999999999997754331  111111110            1   122   


Q ss_pred             EEcCC--CCeEEEeecCCCCeEEEEEecCC
Q 021797          238 IHAPR--KGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       238 Iyapr--Rg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      +|+.+  .+.|-|+|+.+++-+..+.++++
T Consensus       329 ~va~~~~~~~VsVID~~t~kvv~~I~vg~~  358 (368)
T 1mda_H          329 NYANSAGTEVLDIYDAASDQDQSSVELDKG  358 (368)
T ss_dssp             EEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred             EEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence            23443  79999999999999999999875

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=80.82  E-value=26  Score=30.10  Aligned_cols=40  Identities=10%  Similarity=0.128  Sum_probs=30.5

Q ss_pred             CceeeEEEECCCCCEEEEEcC------CCcEEEEEcCCceeEEeec
Q 021797          161 PRKGERLTLSPSGSLAAITDS------LGRILLLDTQALVVVRLWK  200 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDs------lGRV~LiD~~~~~ivRmWK  200 (307)
                      ......|+++|+|++.+++..      .|+|..+|..++.+.++..
T Consensus       134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  179 (333)
T 2dg1_A          134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ  179 (333)
T ss_dssp             CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE
T ss_pred             CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec
Confidence            345778999999988776543      5899999998877766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	307
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	97.69
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	97.64
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.55
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	97.51
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	97.46
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	97.43
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.36
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	97.27
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.25
d1tbga_	340	beta1-subunit of the signal-transducing G protein	97.19
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	97.13
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	97.07
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	96.98
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	96.9
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	96.88
d1tbga_	340	beta1-subunit of the signal-transducing G protein	96.88
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	96.87
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.86
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.83
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.83
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	96.81
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	96.72
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	96.67
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	96.55
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	96.4
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	95.7
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	95.7
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	95.67
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	95.59
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	95.54
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	95.46
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	95.39
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	95.38
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	95.33
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	95.29
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	95.28
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	95.21
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	95.03
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	94.95
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	94.52
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	94.27
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	92.84
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	92.78
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	91.35
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	91.22
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	90.64
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	87.62

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00021  Score=57.15  Aligned_cols=87  Identities=18%  Similarity=0.204  Sum_probs=64.7

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      .++.+..+.+.  |++|+|+++|+....|.|.|+|+.++..++.++|+.+.    |..... +              .. 
T Consensus         9 ~~~~~~~~~V~--c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~----V~~v~~-~--------------~~-   66 (293)
T d1p22a2           9 HCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS----VLCLQY-D--------------ER-   66 (293)
T ss_dssp             ECCCSSCCCEE--EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSC----EEEEEC-C--------------SS-
T ss_pred             eccCCCCCCEE--EEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC----Eeeeec-c--------------cc-
Confidence            44555555554  57899999999999999999999999999999999883    332221 1              01 


Q ss_pred             EEEEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          235 CLAIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                       +++-+..+|.|.+|+++.+..........
T Consensus        67 -~l~s~s~D~~i~~~~~~~~~~~~~~~~~~   95 (293)
T d1p22a2          67 -VIITGSSDSTVRVWDVNTGEMLNTLIHHC   95 (293)
T ss_dssp             -EEEEEETTSCEEEEESSSCCEEEEECCCC
T ss_pred             -eeecccccccccccccccccccccccccc
Confidence             34567789999999999888776665443

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.64  E-value=0.00013  Score=64.46  Aligned_cols=87  Identities=22%  Similarity=0.289  Sum_probs=63.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEE--c-CCCcEEEEEcCCceeEEeec-------------ccccceeeEEEEEecccccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAIT--D-SLGRILLLDTQALVVVRLWK-------------GYRDASCVFMEMLVNKDAAT  220 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavt--D-slGRV~LiD~~~~~ivRmWK-------------GyRDAqc~Wi~~~~~~~~~~  220 (307)
                      +..+...+.+|+.+|+|+++|+.  | +.|.|-|+|+.++..++.++             |+++    ||....=.    
T Consensus       227 l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~----~V~~l~fs----  298 (393)
T d1sq9a_         227 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS----WVMSLSFN----  298 (393)
T ss_dssp             --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS----CEEEEEEC----
T ss_pred             cccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccC----ceeeeccC----
Confidence            44456678899999999888875  3 45789999999999998875             5555    44332211    


Q ss_pred             cccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          221 SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       221 ~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                               ++..  +++-+..+|.|.||++++|.++.+++-
T Consensus       299 ---------pd~~--~l~S~s~D~~v~vWd~~~g~~~~~l~g  329 (393)
T d1sq9a_         299 ---------DSGE--TLCSAGWDGKLRFWDVKTKERITTLNM  329 (393)
T ss_dssp             ---------SSSS--EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             ---------CCCC--eeEEECCCCEEEEEECCCCCEEEEECC
Confidence                     1111  457889999999999999999999973

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.55  E-value=0.00046  Score=56.66  Aligned_cols=87  Identities=11%  Similarity=0.075  Sum_probs=64.7

Q ss_pred             cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       156 ~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .|.-+...+.. |++|+++++|+....|.|.|+|+.++..++.++|+.+    .|....-..             +.   
T Consensus         7 tL~GH~~~vit-c~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~----~V~~l~~s~-------------~~---   65 (355)
T d1nexb2           7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDG----GVWALKYAH-------------GG---   65 (355)
T ss_dssp             EEECCSSSCEE-EEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSS----CEEEEEEET-------------TT---
T ss_pred             EECCcCCCcEE-EEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCC----CEEEEEEcC-------------CC---
Confidence            36666665544 6889999999999999999999999999999999987    343322110             11   


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      +++-+..+|.|.+|++..+..+......
T Consensus        66 ~l~s~s~D~~i~iw~~~~~~~~~~~~~~   93 (355)
T d1nexb2          66 ILVSGSTDRTVRVWDIKKGCCTHVFEGH   93 (355)
T ss_dssp             EEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             EEEEEecccccccccccccccccccccc
Confidence            3456788999999999988776655533

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.0016  Score=52.21  Aligned_cols=51  Identities=22%  Similarity=0.178  Sum_probs=46.5

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA  205 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA  205 (307)
                      +.|.-++..+.+|+.+|+++++|++...|.|.|+|+.++..++.++|+.+.
T Consensus        11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~   61 (317)
T d1vyhc1          11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS   61 (317)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSC
T ss_pred             EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCc
Confidence            447778889999999999999999988999999999999999999998873

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.46  E-value=0.00059  Score=58.75  Aligned_cols=91  Identities=14%  Similarity=0.086  Sum_probs=66.3

Q ss_pred             CCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          159 DHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       159 D~~R~~~~I~lsP~-~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .....+.+++.+|+ +.++++....|.|.|+|+.++..++.++|+.+.-.+-+......              +..  ++
T Consensus       203 ~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~--------------dg~--~l  266 (325)
T d1pgua1         203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--------------DSQ--KF  266 (325)
T ss_dssp             CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--------------SSS--EE
T ss_pred             CCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeecc--------------CCC--EE
Confidence            33444788999996 68888888889999999999999999998877532211111100              111  23


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      +-+-.+|.|.||++++|+.+..+.+.++
T Consensus       267 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~  294 (325)
T d1pgua1         267 ATVGADATIRVWDVTTSKCVQKWTLDKQ  294 (325)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred             EEEeCCCeEEEEECCCCCEEEEEEecCC
Confidence            4567899999999999999988886554

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.43  E-value=0.0012  Score=56.91  Aligned_cols=123  Identities=18%  Similarity=0.164  Sum_probs=78.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccc---eeeEEEEEecccccccccccCCCCCCcc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA---SCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA---qc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      +.+....+.++..+|++++++++...|.|.|+|+.++..++.++..+.-   .-++|....-          .+   +..
T Consensus       185 ~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~----------s~---~~~  251 (311)
T d1nr0a1         185 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW----------SP---DGT  251 (311)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE----------CT---TSS
T ss_pred             cccccccccccccCcccccccccccccccccccccccccccccccccccccccccccccccc----------CC---CCC
Confidence            4455677889999999999999999999999999999988877643321   1123322111          00   111


Q ss_pred             eEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEeccCcccccccCCCCCcccEEEEEeCCCCceEEEec
Q 021797          234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNR  304 (307)
Q Consensus       234 l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ll~~~~g~l~~in~  304 (307)
                       +|+. +-.+|.|.||++++|..+..+.......     ....+.    .+....++... .||.|+..|+
T Consensus       252 -~l~t-gs~Dg~v~iwd~~t~~~~~~l~~~~~~~-----~~~~~~----~~~~~~l~s~s-~dG~i~~wd~  310 (311)
T d1nr0a1         252 -KIAS-ASADKTIKIWNVATLKVEKTIPVGTRIE-----DQQLGI----IWTKQALVSIS-ANGFINFVNP  310 (311)
T ss_dssp             -EEEE-EETTSEEEEEETTTTEEEEEEECCSSGG-----GCEEEE----EECSSCEEEEE-TTCCEEEEET
T ss_pred             -EEEE-EeCCCeEEEEECCCCcEEEEEECCCCcc-----ceEEEE----EecCCEEEEEE-CCCEEEEEeC
Confidence             3433 5679999999999999888776443210     000011    13334444444 4798988885

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.36  E-value=0.00039  Score=57.61  Aligned_cols=80  Identities=11%  Similarity=-0.035  Sum_probs=59.3

Q ss_pred             EEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeE
Q 021797          167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGII  246 (307)
Q Consensus       167 I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~l  246 (307)
                      ++++|+++|++++...+.|.+||+.++.+++..+.--.-...-+.+..                |.. +|.+-..+.|.|
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~sp----------------DG~-~l~v~~~~~~~v   64 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP----------------DNR-TAYVLNNHYGDI   64 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT----------------TSS-EEEEEETTTTEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECC----------------CCC-EEEEEECCCCcE
Confidence            467999999999999999999999999999988732221222222211                111 455677788999


Q ss_pred             EEeecCCCCeEEEEEec
Q 021797          247 EVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       247 EVW~~~~G~RV~a~~v~  263 (307)
                      .+|++.+|..+..+..+
T Consensus        65 ~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_          65 YGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             EEEETTTTEEEEEEESC
T ss_pred             EEEeCccCeeeeeeccc
Confidence            99999999999877754

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0022  Score=52.08  Aligned_cols=96  Identities=14%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             eEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEe-----ccccc-------ccc------cccC
Q 021797          165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV-----NKDAA-------TSS------AYYA  226 (307)
Q Consensus       165 ~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~-----~~~~~-------~~~------~~~~  226 (307)
                      ...+.+++++++++....|.|.|+|+..+..++.++++...-.++-.-..     ..|..       ..+      .+..
T Consensus       179 ~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~  258 (342)
T d2ovrb2         179 RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK  258 (342)
T ss_dssp             CEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTS
T ss_pred             ccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccce
Confidence            45566677777788777888888888888888888887766555432111     11100       000      0000


Q ss_pred             CCC------CCcceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          227 PVK------SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       227 ~~k------~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ...      .+..  +++-+..+|.|.||++++|+.+..+..
T Consensus       259 ~~~~~~~~~~~~~--~~~s~s~Dg~i~iwd~~tg~~i~~~~~  298 (342)
T d2ovrb2         259 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLVT  298 (342)
T ss_dssp             CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEEE
T ss_pred             eeeceeecccCCC--eeEEEcCCCEEEEEECCCCCEEEEEec
Confidence            000      0111  446677899999999999999988764

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.25  E-value=0.0016  Score=53.27  Aligned_cols=87  Identities=11%  Similarity=0.122  Sum_probs=67.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.........+..+|++.++++....|.|.++|+.++..+...+|+.+.= .-+..  .              + .   +
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v-~~~~~--~--------------~-~---~  255 (355)
T d1nexb2         197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV-GLLRL--S--------------D-K---F  255 (355)
T ss_dssp             ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCC-CEEEE--C--------------S-S---E
T ss_pred             eeccccccccccccccceeeecccccceEEeeeccccccccccccccccc-ccccc--c--------------c-c---e
Confidence            44455667789999999999999999999999999999999999987632 22211  0              0 1   4


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ++.+..+|.|.||+++++.+....+-..
T Consensus       256 l~~~~~dg~i~iwd~~~~~~~~~~~~~~  283 (355)
T d1nexb2         256 LVSAAADGSIRGWDANDYSRKFSYHHTN  283 (355)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECTT
T ss_pred             eeeeecccccccccccccceecccccCC
Confidence            5677889999999999999988776443

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.19  E-value=0.002  Score=52.91  Aligned_cols=87  Identities=13%  Similarity=0.064  Sum_probs=63.2

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc-ceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD-ASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD-Aqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +......+.+|+.+|++++++++...|.|.++|+.....++.+..... ..+..+....                +..  
T Consensus       222 ~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~----------------~~~--  283 (340)
T d1tbga_         222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK----------------SGR--  283 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECS----------------SSC--
T ss_pred             EeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECC----------------CCC--
Confidence            455566788999999999999999999999999999988877643332 1222222110                111  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +++-+-.+|.|.||++++|..+..+.
T Consensus       284 ~l~~g~~dg~i~iwd~~~~~~~~~~~  309 (340)
T d1tbga_         284 LLLAGYDDFNCNVWDALKADRAGVLA  309 (340)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             EEEEEECCCEEEEEECCCCcEEEEEc
Confidence            33456778999999999999998775

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.13  E-value=0.00098  Score=56.74  Aligned_cols=83  Identities=8%  Similarity=0.138  Sum_probs=60.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .......+.+++.+|+++++++....|.|.++|+.++..++.++|+.+.    |........    ..   -.++.  -+
T Consensus       304 ~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~----V~~~~~~~~----~~---~spd~--~~  370 (388)
T d1erja_         304 YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS----VISVAVANG----SS---LGPEY--NV  370 (388)
T ss_dssp             EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSS----CT---TCTTC--EE
T ss_pred             cccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCC----EEEEEEecC----cc---cCCCC--CE
Confidence            4455667899999999999999999999999999999999999999873    221111000    00   00122  24


Q ss_pred             EEEcCCCCeEEEeecC
Q 021797          237 AIHAPRKGIIEVWQMR  252 (307)
Q Consensus       237 VIyaprRg~lEVW~~~  252 (307)
                      ++-+..+|.|.||+++
T Consensus       371 l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         371 FATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEETTSEEEEEEEE
T ss_pred             EEEEeCCCEEEEEeee
Confidence            5668899999999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.011  Score=47.01  Aligned_cols=104  Identities=13%  Similarity=0.094  Sum_probs=68.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEeccccc-cccc-ccC--CCCCCc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA-TSSA-YYA--PVKSDY  232 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~-~~~~-~~~--~~k~~~  232 (307)
                      +.........++.+|+++++++++..|.|.++|+.++..++.++++++.-.. +......... .... ...  ......
T Consensus       139 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (317)
T d1vyhc1         139 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC-ISWAPESSYSSISEATGSETKKSGKPG  217 (317)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE-EEECCSCGGGGGGGCCSCC-------C
T ss_pred             EccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceE-EEEeeccccceeeccccceeeeeccCC
Confidence            4455666788999999999999999999999999999999999999884322 2221111100 0000 000  000011


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                        .+++-+..+|.|.+|++++|..+..+...
T Consensus       218 --~~~~~~~~d~~i~~~~~~~~~~~~~~~~~  246 (317)
T d1vyhc1         218 --PFLLSGSRDKTIKMWDVSTGMCLMTLVGH  246 (317)
T ss_dssp             --CEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             --ceeEeccCCCEEEEEECCCCcEEEEEeCC
Confidence              13345667899999999999988877643

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.98  E-value=0.006  Score=52.31  Aligned_cols=87  Identities=10%  Similarity=0.120  Sum_probs=63.8

Q ss_pred             ccCCCceeeEEEECCCCCE-EEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          157 LKDHPRKGERLTLSPSGSL-AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~l-AavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      |......+.+|+.+|++++ +++....|.|.++|+.++..+..++++...    |....-.             ++..  
T Consensus       142 l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~----i~~v~~~-------------p~~~--  202 (311)
T d1nr0a1         142 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF----VHSVRYN-------------PDGS--  202 (311)
T ss_dssp             CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSC----EEEEEEC-------------TTSS--
T ss_pred             ccccccccccccccccceeeeccccccccccccccccccccccccccccc----ccccccC-------------cccc--
Confidence            4445566889999999975 566678899999999999999999998773    2221110             0112  


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      +++.+-.+|.|.||+++++.++..+..
T Consensus       203 ~l~~~~~d~~v~~~d~~~~~~~~~~~~  229 (311)
T d1nr0a1         203 LFASTGGDGTIVLYNGVDGTKTGVFED  229 (311)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEECBC
T ss_pred             ccccccccccccccccccccccccccc
Confidence            234466799999999999998877653

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=96.90  E-value=0.0085  Score=50.80  Aligned_cols=84  Identities=15%  Similarity=0.079  Sum_probs=56.9

Q ss_pred             eeEEEECCCCCEEEEE-----cCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE-
Q 021797          164 GERLTLSPSGSLAAIT-----DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA-  237 (307)
Q Consensus       164 ~~~I~lsP~~~lAavt-----DslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV-  237 (307)
                      ...++++|+|+.++++     +..++|.++|..++.++....+--...+.|-.     |          +   ..++.+ 
T Consensus        23 ~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~Sp-----D----------G---~~l~va~   84 (373)
T d2madh_          23 TNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAH-----S----------G---SEFALAS   84 (373)
T ss_pred             ccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCccEEEcC-----C----------C---CEEEEEe
Confidence            3456688999877765     56689999999999999887654443333321     1          0   111211 


Q ss_pred             ------EEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          238 ------IHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       238 ------IyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                            ....+.|.|.||++++|+.+..+..+..
T Consensus        85 ~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~  118 (373)
T d2madh_          85 TSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA  118 (373)
T ss_pred             ecCCcccccccceEEEEEECCCCcEEEEEecCCc
Confidence                  1235678999999999999888876654

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.015  Score=49.29  Aligned_cols=89  Identities=19%  Similarity=0.258  Sum_probs=67.6

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +......+..++.+|++.+++++...+.|.++|+.++...+..+++.+.    +....-..             +..  +
T Consensus       137 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~----v~~l~~s~-------------~~~--~  197 (337)
T d1gxra_         137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISN-------------DGT--K  197 (337)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECT-------------TSS--E
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccc-------------ccc--c
Confidence            4445566788999999999999999999999999999999999988773    32221100             011  3


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecC
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ++.+-.+|.|.+|+++++..+..+....
T Consensus       198 ~~~~~~d~~v~i~d~~~~~~~~~~~~~~  225 (337)
T d1gxra_         198 LWTGGLDNTVRSWDLREGRQLQQHDFTS  225 (337)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred             cccccccccccccccccceeeccccccc
Confidence            4567779999999999999888776544

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.88  E-value=0.0049  Score=50.39  Aligned_cols=50  Identities=14%  Similarity=0.118  Sum_probs=46.3

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      ..|.-++..+.+|+.+|+++++|++...|.|.++|+.++..++.++++-+
T Consensus        49 ~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~   98 (340)
T d1tbga_          49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS   98 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCS
T ss_pred             EEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccc
Confidence            45888899999999999999999999999999999999999999998765

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.87  E-value=0.0032  Score=54.73  Aligned_cols=78  Identities=10%  Similarity=0.007  Sum_probs=55.2

Q ss_pred             eeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          164 GERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       164 ~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      +.+++.+|+|+++|++...|.|.|+|+.++.  .++.++|+.++    |....-.             ++..  +++-+.
T Consensus        10 It~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~----V~~l~fs-------------p~~~--~l~s~s   70 (371)
T d1k8kc_          10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ----VTGVDWA-------------PDSN--RIVTCG   70 (371)
T ss_dssp             CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSC----EEEEEEE-------------TTTT--EEEEEE
T ss_pred             eEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCC----EEEEEEC-------------CCCC--EEEEEE
Confidence            7899999999999999888999999998775  66778999873    3222110             0011  234467


Q ss_pred             CCCeEEEeecCCCCeEEEE
Q 021797          242 RKGIIEVWQMRTGPRLLTI  260 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~  260 (307)
                      .+|.|.||+++++.....+
T Consensus        71 ~D~~i~vWd~~~~~~~~~~   89 (371)
T d1k8kc_          71 TDRNAYVWTLKGRTWKPTL   89 (371)
T ss_dssp             TTSCEEEEEEETTEEEEEE
T ss_pred             CCCeEEEEeeccccccccc
Confidence            7899999998766543333

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.86  E-value=0.008  Score=48.61  Aligned_cols=93  Identities=14%  Similarity=0.083  Sum_probs=64.8

Q ss_pred             eeeEEEECCCCCEEEEE--c-CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEE
Q 021797          163 KGERLTLSPSGSLAAIT--D-SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH  239 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavt--D-slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIy  239 (307)
                      ....++++|+++.+.++  | ..++|.++|+.++.+++.+..-.+  ...+.+..+            +   .  +|++-
T Consensus       201 ~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~--~~~va~spd------------g---~--~l~va  261 (301)
T d1l0qa2         201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD--PAGIAVTPD------------G---K--KVYVA  261 (301)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS--EEEEEECTT------------S---S--EEEEE
T ss_pred             CcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCCC--EEEEEEeCC------------C---C--EEEEE
Confidence            35678899998766553  3 458899999999999887765333  222322111            1   1  46677


Q ss_pred             cCCCCeEEEeecCCCCeEEEEEecCCeEEeccCccccc
Q 021797          240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGS  277 (307)
Q Consensus       240 aprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~~~~~~~  277 (307)
                      ....|.|.||++.+|..+.++.++++   -+....|++
T Consensus       262 ~~~~~~i~v~D~~t~~~~~~~~vg~~---P~~~g~f~~  296 (301)
T d1l0qa2         262 LSFCNTVSVIDTATNTITATMAVGKN---PYASGQFIG  296 (301)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECSSS---EECCSSCEE
T ss_pred             ECCCCeEEEEECCCCeEEEEEeCCCC---CcEeEEEcc
Confidence            78899999999999999999999875   223444544

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.83  E-value=0.011  Score=47.77  Aligned_cols=83  Identities=12%  Similarity=0.102  Sum_probs=59.5

Q ss_pred             eeeEEEECCCCCEEEEE-cCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcC
Q 021797          163 KGERLTLSPSGSLAAIT-DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP  241 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavt-DslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyap  241 (307)
                      ....|++||+|++++++ ...|+|.++|+.++..++.+++..+..  .+...  .+             ..  ++++...
T Consensus        33 ~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~--~~~~~--~~-------------~~--~~~~~~~   93 (301)
T d1l0qa2          33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ--GVAVS--PD-------------GK--QVYVTNM   93 (301)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE--EEEEC--TT-------------SS--EEEEEET
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccccc--ccccc--cc-------------cc--ccccccc
Confidence            35679999999977655 567899999999999999998876532  12111  11             01  4556777


Q ss_pred             CCCeEEEeecCCCCeEEEEEecC
Q 021797          242 RKGIIEVWQMRTGPRLLTIQCAK  264 (307)
Q Consensus       242 rRg~lEVW~~~~G~RV~a~~v~~  264 (307)
                      ..+.+.+|+..++..+..+....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~  116 (301)
T d1l0qa2          94 ASSTLSVIDTTSNTVAGTVKTGK  116 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEECSS
T ss_pred             ccceeeecccccceeeeeccccc
Confidence            77888888888888777766544

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.83  E-value=0.0082  Score=50.77  Aligned_cols=87  Identities=17%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .......+.+|+.+|+|++++++...|.|.++|..++..++.++|+.+.    +....-..             +.  ..
T Consensus       117 ~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~----v~~~~~~~-------------~~--~~  177 (388)
T d1erja_         117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFP-------------SG--DK  177 (388)
T ss_dssp             --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECT-------------TS--SE
T ss_pred             ccCCCCCEEEEEECCCCCcceeccccccccccccccccccccccccccc----cccccccc-------------cc--cc
Confidence            3344566889999999999999999999999999999999999998873    32221110             01  13


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                      ++.+-..|.+.+|+++++..+.....
T Consensus       178 ~~~~~~~~~i~~~d~~~~~~~~~~~~  203 (388)
T d1erja_         178 LVSGSGDRTVRIWDLRTGQCSLTLSI  203 (388)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             ccccccceeeeeeecccccccccccc
Confidence            35566788899999888776665543

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0047  Score=50.09  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEec------cccc-------cc
Q 021797          155 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN------KDAA-------TS  221 (307)
Q Consensus       155 ~~l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~------~~~~-------~~  221 (307)
                      ..|.-+...+.+ |++|+|+++|++...|.|.|+|+.++..++.++|+.+.=.+ +....+      .|..       ..
T Consensus        10 ~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~-v~~~~~~l~s~s~D~~~~~~~~~~~   87 (342)
T d2ovrb2          10 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETG   87 (342)
T ss_dssp             EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEE-EEEETTEEEEEETTSCEEEEETTTT
T ss_pred             EEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEE-EEeCCCccccceecccccccccccc
Confidence            336555666655 68999999999999999999999999999999999874211 111100      0100       00


Q ss_pred             cc---ccCCCC----CCcceEEEEEcCCCCeEEEeecCCCCeEEEEEecCCeEEecc
Q 021797          222 SA---YYAPVK----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQP  271 (307)
Q Consensus       222 ~~---~~~~~k----~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~~~~~Ll~~  271 (307)
                      ..   ......    ....--....+...+.+.+|++.++.....+...........
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~  144 (342)
T d2ovrb2          88 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ  144 (342)
T ss_dssp             EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred             cceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeec
Confidence            00   000000    000012445555667777888888777777776666555543

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.72  E-value=0.0036  Score=51.48  Aligned_cols=48  Identities=19%  Similarity=0.122  Sum_probs=41.7

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeec-cccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK-GYRD  204 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWK-GyRD  204 (307)
                      +.=+.+.+.+|+.+|+|+++|+++..|.|.|+|+.++..++.+. ++.+
T Consensus         8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~   56 (299)
T d1nr0a2           8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT   56 (299)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSS
T ss_pred             cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCC
Confidence            44467789999999999999999999999999999999999885 4554

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.67  E-value=0.0073  Score=49.39  Aligned_cols=86  Identities=20%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEE-eecccccc--eeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR-LWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivR-mWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .-.+.+|+.+|+|+++++.+..|+|.++|+.++..+. .|.++.+.  .++|-..    ...   .... . .+.  -++
T Consensus       162 ~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~----~~~---~~~~-~-~~~--~~l  230 (287)
T d1pgua2         162 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPA----EKG---ANEE-E-IEE--DLV  230 (287)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCC----C----------C-CSC--CEE
T ss_pred             CCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeeccc----ccc---cccc-c-CCC--Cee
Confidence            3357899999999999999999999999999998765 57776552  1222110    000   0000 0 111  144


Q ss_pred             EEcCCCCeEEEeecCCCCeE
Q 021797          238 IHAPRKGIIEVWQMRTGPRL  257 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV  257 (307)
                      +-+-.+|.|.||+++++.+.
T Consensus       231 ~sgs~D~~i~iw~~~~~~~~  250 (287)
T d1pgua2         231 ATGSLDTNIFIYSVKRPMKI  250 (287)
T ss_dssp             EEEETTSCEEEEESSCTTCC
T ss_pred             EeecCCCeEEEEECCCCCeE
Confidence            56778999999999875543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.55  E-value=0.0052  Score=51.50  Aligned_cols=87  Identities=21%  Similarity=0.208  Sum_probs=58.7

Q ss_pred             CCCceeeEEEECCCCCEEEEEc-----CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcc
Q 021797          159 DHPRKGERLTLSPSGSLAAITD-----SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC  233 (307)
Q Consensus       159 D~~R~~~~I~lsP~~~lAavtD-----slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~  233 (307)
                      |++|...  +++|+|+.+.++|     ..+.|.++|..++.+++..++-....++|-    + |          +   ..
T Consensus         1 ~~p~~~~--a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~S----p-D----------g---~~   60 (355)
T d2bbkh_           1 DEPRILE--APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVA----D-D----------G---SF   60 (355)
T ss_dssp             CCCCBCC--CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEEC----T-T----------S---SC
T ss_pred             CCCcEeE--eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCceEEc----C-C----------C---CE
Confidence            4445444  5689998888875     245699999999999999886555444431    1 1          1   12


Q ss_pred             eEEEEE-------cCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          234 LCLAIH-------APRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       234 l~LVIy-------aprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      ++.+-.       ..+.|.|.||++.+|..+..+..+..
T Consensus        61 l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~   99 (355)
T d2bbkh_          61 IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA   99 (355)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             EEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCc
Confidence            222221       24568999999999999998876543

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.40  E-value=0.014  Score=47.82  Aligned_cols=77  Identities=13%  Similarity=0.084  Sum_probs=53.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eEEeecccccceeeEEEEEecccccccccccCCCCCCcce
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL  234 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l  234 (307)
                      +......+.+++.+|+++++|+....|.|.|+|+.++.  .+....++....+.-+.....                .  
T Consensus       220 ~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------~--  281 (299)
T d1nr0a2         220 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE----------------T--  281 (299)
T ss_dssp             CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET----------------T--
T ss_pred             ccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCC----------------C--
Confidence            33445678899999999999999889999999998764  344555555544333221111                1  


Q ss_pred             EEEEEcCCCCeEEEeecC
Q 021797          235 CLAIHAPRKGIIEVWQMR  252 (307)
Q Consensus       235 ~LVIyaprRg~lEVW~~~  252 (307)
                       .+|-+..+|.|.||++.
T Consensus       282 -~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         282 -TIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             -EEEEEETTSCEEEEECC
T ss_pred             -EEEEEeCCCEEEEEecc
Confidence             33557789999999985

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.70  E-value=0.05  Score=44.18  Aligned_cols=89  Identities=7%  Similarity=-0.057  Sum_probs=61.3

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      ....+....+..+|++.++++.|  +.|.++|+.++..++-.+--..  ...+.+..                +.. +|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~~~~--~~~~~~s~----------------dG~-~l~  295 (337)
T d1pbyb_         237 RIMDVFYFSTAVNPAKTRAFGAY--NVLESFDLEKNASIKRVPLPHS--YYSVNVST----------------DGS-TVW  295 (337)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEE--SEEEEEETTTTEEEEEEECSSC--CCEEEECT----------------TSC-EEE
T ss_pred             cCCCcceEEEEecccceEEEEcc--ccEEEEECCCCcEEEEEcCCCC--EEEEEECC----------------CCC-EEE
Confidence            34455666788999999998887  7899999999998876543211  11222211                111 333


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEEecCCeEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKI  268 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~v~~~~~L  268 (307)
                      + +-..|.|.||+..+++++..++++.++.+
T Consensus       296 v-~~~~~~i~v~D~~t~~~v~~i~~~g~~~~  325 (337)
T d1pbyb_         296 L-GGALGDLAAYDAETLEKKGQVDLPGNASM  325 (337)
T ss_dssp             E-ESBSSEEEEEETTTCCEEEEEECGGGCCC
T ss_pred             E-EeCCCcEEEEECCCCcEEEEEECCCCCcc
Confidence            3 46789999999999999999997654433

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.052  Score=45.77  Aligned_cols=84  Identities=12%  Similarity=0.123  Sum_probs=59.3

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      .+....+.+++.+|+++++++....|.|.++|+.++..+.. +++.+    .|....-.             ++..  ++
T Consensus       221 ~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~----~i~~v~~s-------------~~g~--~l  280 (337)
T d1gxra_         221 HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HLHES----CVLSLKFA-------------YCGK--WF  280 (337)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CCCSS----CEEEEEEC-------------TTSS--EE
T ss_pred             cccccceEEEEEcccccccceeccccccccccccccccccc-ccccc----ccceEEEC-------------CCCC--EE
Confidence            34466778899999999999999999999999999987654 44443    22211100             0111  23


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +-+-.+|.|.||++.+|..+..+.
T Consensus       281 ~s~s~Dg~i~iwd~~~~~~~~~~~  304 (337)
T d1gxra_         281 VSTGKDNLLNAWRTPYGASIFQSK  304 (337)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EEEeCCCeEEEEECCCCCEEEEcc
Confidence            446678999999999999887654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.67  E-value=0.024  Score=45.33  Aligned_cols=81  Identities=17%  Similarity=0.182  Sum_probs=55.6

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce---eEEeecccccc--eeeEEEEEecccccccccccCCCCCCcceE
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALV---VVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~---ivRmWKGyRDA--qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +..+.+|+.+|+++++|++...|.|-|+|+.++.   .++.-.|+.++  .++|..   ..               .  .
T Consensus        11 ~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~---~~---------------~--~   70 (342)
T d1yfqa_          11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID---NT---------------D--L   70 (342)
T ss_dssp             SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE---SS---------------S--E
T ss_pred             CCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeC---CC---------------C--C
Confidence            4458899999999999999899999999986543   23333355553  223332   10               1  2


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +++-+-.+|.|.+|++..+.......
T Consensus        71 ~l~sg~~d~~v~~w~~~~~~~~~~~~   96 (342)
T d1yfqa_          71 QIYVGTVQGEILKVDLIGSPSFQALT   96 (342)
T ss_dssp             EEEEEETTSCEEEECSSSSSSEEECB
T ss_pred             EEEEcccccceeeeeccccccccccc
Confidence            55667789999999998776655544

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.59  E-value=0.042  Score=49.65  Aligned_cols=114  Identities=10%  Similarity=0.137  Sum_probs=64.7

Q ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEE
Q 021797          169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEV  248 (307)
Q Consensus       169 lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEV  248 (307)
                      .++.+-++++....|.|.|||..++.+++..++-..    -..+.-..              |.. +|++ +-++|.|.+
T Consensus        28 ~~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~----~~~v~fSp--------------DG~-~l~~-~s~dg~v~~   87 (432)
T d1qksa2          28 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA----VHISRLSA--------------SGR-YLFV-IGRDGKVNM   87 (432)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSC----EEEEEECT--------------TSC-EEEE-EETTSEEEE
T ss_pred             CCCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCCCC----eeEEEECC--------------CCC-EEEE-EcCCCCEEE
Confidence            344444456678889999999999999999987642    11211111              111 3333 567899999


Q ss_pred             eecCCCC--eEEEEEecCCeE--EeccCccccccc-CCCCCcccEEEEEeCCCCceEEE
Q 021797          249 WQMRTGP--RLLTIQCAKGSK--ILQPTYRFGSSM-ASSPYVPLEVFLLNGDSGQLSVL  302 (307)
Q Consensus       249 W~~~~G~--RV~a~~v~~~~~--Ll~~~~~~~~~~-~~~~~~~~~~~ll~~~~g~l~~i  302 (307)
                      |++.++.  .+..+.++.+.+  .+.+....-|.. -.+.+....+.++|..+|++..+
T Consensus        88 ~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~  146 (432)
T d1qksa2          88 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI  146 (432)
T ss_dssp             EETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred             EEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceee
Confidence            9999876  455555544322  222211111100 01114456677777777766543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=95.54  E-value=0.04  Score=44.97  Aligned_cols=89  Identities=12%  Similarity=-0.003  Sum_probs=59.9

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      +.+..+....+..+|++.+.+..+ .++|.++|+.++..++.-+--.  ...-+.+..+            +   .  .|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~--~~~~va~s~D------------G---~--~l  306 (346)
T d1jmxb_         247 FADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH--TYYCVAFDKK------------G---D--KL  306 (346)
T ss_dssp             EEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSS--CCCEEEECSS------------S---S--CE
T ss_pred             eecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEcCCC--CEEEEEEcCC------------C---C--EE
Confidence            445566677788888776655433 4689999999999988765321  1122322211            1   1  23


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEEecCCe
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGS  266 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~v~~~~  266 (307)
                      ++ +-..|.|.||++++++.|..++++.|-
T Consensus       307 ~v-~~~d~~v~v~D~~t~~~i~~i~~p~g~  335 (346)
T d1jmxb_         307 YL-GGTFNDLAVFNPDTLEKVKNIKLPGGD  335 (346)
T ss_dssp             EE-ESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred             EE-EeCCCcEEEEECccCCEEEEEECCCCC
Confidence            33 356899999999999999999987764

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.46  E-value=0.012  Score=51.22  Aligned_cols=47  Identities=15%  Similarity=0.076  Sum_probs=43.1

Q ss_pred             cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       158 ~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      .-+...+.+|+.+|+++++|++...|.|.|+|+.+|..++..+|+.+
T Consensus       286 ~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~  332 (393)
T d1sq9a_         286 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD  332 (393)
T ss_dssp             BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred             ecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCC
Confidence            33456689999999999999999999999999999999999999988

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.39  E-value=0.044  Score=48.44  Aligned_cols=81  Identities=12%  Similarity=-0.057  Sum_probs=53.6

Q ss_pred             eeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEee-----cccccceeeEEEEEecccccccccccCCCCCCcceEEE
Q 021797          163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW-----KGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA  237 (307)
Q Consensus       163 ~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmW-----KGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV  237 (307)
                      ....|+.||||+++++++..|.|.++|+.++....+.     .|.+.    ++....          .+   +|.. +|+
T Consensus        63 ~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~----~~~s~~----------~s---pDG~-~l~  124 (426)
T d1hzua2          63 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS----VESSKF----------KG---YEDR-YTI  124 (426)
T ss_dssp             SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE----EEECCS----------TT---CTTT-EEE
T ss_pred             CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcc----eEEeee----------ec---CCCC-EEE
Confidence            4678999999999999988899999999988644333     23322    222111          00   1111 344


Q ss_pred             EEcCCCCeEEEeecCCCCeEEEEE
Q 021797          238 IHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       238 IyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      +-....+.+.+|+..++..+....
T Consensus       125 v~~~~~~~v~i~d~~~~~~~~~~~  148 (426)
T d1hzua2         125 AGAYWPPQFAIMDGETLEPKQIVS  148 (426)
T ss_dssp             EEEEESSEEEEEETTTCCEEEEEE
T ss_pred             EeecCCCeEEEEcCCccceeEEee
Confidence            555567899999999887765554

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.38  E-value=0.081  Score=44.72  Aligned_cols=94  Identities=13%  Similarity=0.113  Sum_probs=63.5

Q ss_pred             CccccCCCceeeEEEECCCCCE-EEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCc
Q 021797          154 LTCLKDHPRKGERLTLSPSGSL-AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY  232 (307)
Q Consensus       154 l~~l~D~~R~~~~I~lsP~~~l-AavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~  232 (307)
                      +..+......+.+++.+|++.+ +++....|.|.++|..++......+..+.. -.+|....-          .|..  .
T Consensus       152 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~~v~~v~~----------~pd~--~  218 (325)
T d1pgua1         152 LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ-GSFVRDVEF----------SPDS--G  218 (325)
T ss_dssp             EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT-TCCEEEEEE----------CSTT--C
T ss_pred             ceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCC-CCccEEeee----------cccc--c
Confidence            3446667788899999998864 555667899999999998888777664432 113322111          0111  1


Q ss_pred             ceEEEEEcCCCCeEEEeecCCCCeEEEEEe
Q 021797          233 CLCLAIHAPRKGIIEVWQMRTGPRLLTIQC  262 (307)
Q Consensus       233 ~l~LVIyaprRg~lEVW~~~~G~RV~a~~v  262 (307)
                        -+++-+-.+|.|.||+++++..+..+..
T Consensus       219 --~~l~s~~~d~~i~iwd~~~~~~~~~l~~  246 (325)
T d1pgua1         219 --EFVITVGSDRKISCFDGKSGEFLKYIED  246 (325)
T ss_dssp             --CEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred             --eeccccccccceeeeeeccccccccccc
Confidence              1345566799999999999999887763

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.33  E-value=0.11  Score=42.02  Aligned_cols=74  Identities=11%  Similarity=0.066  Sum_probs=48.5

Q ss_pred             CEEEEEcCCCcEEEEEcCCceeEEeecccccc-eeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeecC
Q 021797          174 SLAAITDSLGRILLLDTQALVVVRLWKGYRDA-SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMR  252 (307)
Q Consensus       174 ~lAavtDslGRV~LiD~~~~~ivRmWKGyRDA-qc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~  252 (307)
                      .|+++.-..|+|.+||+.++.+++..+.--.. ...-+-+             +   +|.. +|++-....|.|.||++.
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~-------------s---pDg~-~l~v~~~~~~~v~v~D~~   64 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMV-------------A---PGGR-IAYATVNKSESLVKIDLV   64 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEE-------------C---TTSS-EEEEEETTTTEEEEEETT
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEE-------------C---CCCC-EEEEEECCCCeEEEEECC
Confidence            35666656699999999999999877532110 0011111             1   1211 344445678999999999


Q ss_pred             CCCeEEEEEecC
Q 021797          253 TGPRLLTIQCAK  264 (307)
Q Consensus       253 ~G~RV~a~~v~~  264 (307)
                      +|+.+..+....
T Consensus        65 t~~~~~~~~~~~   76 (337)
T d1pbyb_          65 TGETLGRIDLST   76 (337)
T ss_dssp             TCCEEEEEECCB
T ss_pred             CCcEEEEEecCC
Confidence            999999887653

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.29  E-value=0.081  Score=43.43  Aligned_cols=48  Identities=8%  Similarity=0.102  Sum_probs=41.4

Q ss_pred             ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccccc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD  204 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRD  204 (307)
                      +......+..++.+|+|++++++...+.+.++|+.++...+..++...
T Consensus        81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (360)
T d1k32a3          81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA  128 (360)
T ss_dssp             CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred             eeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccc
Confidence            334566678999999999999999999999999999999999887654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.28  E-value=0.27  Score=40.10  Aligned_cols=81  Identities=11%  Similarity=-0.004  Sum_probs=53.5

Q ss_pred             eeeEEEECCCCCEEEE-EcCC-CcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEc
Q 021797          163 KGERLTLSPSGSLAAI-TDSL-GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA  240 (307)
Q Consensus       163 ~~~~I~lsP~~~lAav-tDsl-GRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIya  240 (307)
                      .+.+++.||+|+++++ ++.- ..|.++|+.++.+.++...-..-.  -+.. .+               +..  .++..
T Consensus        44 ~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~--~~~~-sp---------------dg~--~l~~~  103 (360)
T d1k32a3          44 RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF--AMGV-DR---------------NGK--FAVVA  103 (360)
T ss_dssp             CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE--EEEE-CT---------------TSS--EEEEE
T ss_pred             CEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCceEE--eeee-cc---------------ccc--cccee
Confidence            4688999999987765 4444 468899999999887654333211  1111 11               111  34566


Q ss_pred             CCCCeEEEeecCCCCeEEEEEec
Q 021797          241 PRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       241 prRg~lEVW~~~~G~RV~a~~v~  263 (307)
                      -.++.+.+|++.++.....+...
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~  126 (360)
T d1k32a3         104 NDRFEIMTVDLETGKPTVIERSR  126 (360)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECS
T ss_pred             ccccccccccccccceeeeeecc
Confidence            77889999999998887776644

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.21  E-value=0.12  Score=44.34  Aligned_cols=84  Identities=6%  Similarity=-0.020  Sum_probs=55.4

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce------------------eEEeecccccceeeEEEEEecccccccc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALV------------------VVRLWKGYRDASCVFMEMLVNKDAATSS  222 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~------------------ivRmWKGyRDAqc~Wi~~~~~~~~~~~~  222 (307)
                      +-.+.++..+|+++++|+....|.|.++|+....                  .+...+++..    |+....        
T Consensus       141 ~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~--------  208 (371)
T d1k8kc_         141 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG----WVHGVC--------  208 (371)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS----CEEEEE--------
T ss_pred             ccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccC----cEEEEE--------
Confidence            4457789999999999999999999999986543                  2222233222    221110        


Q ss_pred             cccCCCCCCcceEEEEEcCCCCeEEEeecCCCCeEEEEEec
Q 021797          223 AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA  263 (307)
Q Consensus       223 ~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~RV~a~~v~  263 (307)
                        ..+   +..  +++.+..+|.|.+|+++++..+..+...
T Consensus       209 --~s~---~g~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~  242 (371)
T d1k8kc_         209 --FSA---NGS--RVAWVSHDSTVCLADADKKMAVATLASE  242 (371)
T ss_dssp             --ECS---SSS--EEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred             --eec---ccc--cccccccCCcceEEeeecccceeeeecc
Confidence              001   111  2345667999999999999998887643

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.03  E-value=0.069  Score=44.29  Aligned_cols=82  Identities=9%  Similarity=0.043  Sum_probs=57.1

Q ss_pred             EEEECCCCCEEEEEcCC----------CcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          166 RLTLSPSGSLAAITDSL----------GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       166 ~I~lsP~~~lAavtDsl----------GRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      .+..+|+++++.++-..          .+|.++|+.++..++.++.-+.  ...+.+..                +...+
T Consensus       253 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~--~~~~a~sp----------------DG~~~  314 (355)
T d2bbkh_         253 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE--IDSINVSQ----------------DEKPL  314 (355)
T ss_dssp             CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE--ECEEEECC----------------SSSCE
T ss_pred             EEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCC--EEEEEEcC----------------CCCeE
Confidence            47888988766654222          4799999999999998875332  22222211                11114


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEE-ecCC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQ-CAKG  265 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~-v~~~  265 (307)
                      |++-....|.|.||++++|+.+..+. ++++
T Consensus       315 l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~  345 (355)
T d2bbkh_         315 LYALSTGDKTLYIHDAESGEELRSVNQLGHG  345 (355)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred             EEEEECCCCEEEEEECCCCCEEEEEeCcCCC
Confidence            66778889999999999999999886 5554

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.95  E-value=0.05  Score=49.11  Aligned_cols=82  Identities=12%  Similarity=-0.050  Sum_probs=55.7

Q ss_pred             ceeeEEEECCCCCEEEEEcCCCcEEEEEcCCce--eE---EeecccccceeeEEEEEecccccccccccCCCCCCcceEE
Q 021797          162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VV---RLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL  236 (307)
Q Consensus       162 R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~--iv---RmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~L  236 (307)
                      .....|+.||||++++++...|.|.++|+.++.  ++   ++-++.|+    .+....-          +   +|.. +|
T Consensus        62 ~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~----~~~s~~~----------S---pDG~-~l  123 (432)
T d1qksa2          62 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS----IETSKME----------G---WEDK-YA  123 (432)
T ss_dssp             SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE----EEECCST----------T---CTTT-EE
T ss_pred             CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCC----eEEeccc----------C---CCCC-EE
Confidence            347899999999999999889999999988765  22   23333333    2221110          0   1111 45


Q ss_pred             EEEcCCCCeEEEeecCCCCeEEEEE
Q 021797          237 AIHAPRKGIIEVWQMRTGPRLLTIQ  261 (307)
Q Consensus       237 VIyaprRg~lEVW~~~~G~RV~a~~  261 (307)
                      ++-+-..+.|.||+..+|.-+..+.
T Consensus       124 ~vs~~~~~~v~i~d~~t~~~~~~~~  148 (432)
T d1qksa2         124 IAGAYWPPQYVIMDGETLEPKKIQS  148 (432)
T ss_dssp             EEEEEETTEEEEEETTTCCEEEEEE
T ss_pred             EEEcCCCCeEEEEeCccccceeeec
Confidence            5666678999999999988777665

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.52  E-value=0.063  Score=46.07  Aligned_cols=83  Identities=5%  Similarity=-0.062  Sum_probs=57.5

Q ss_pred             eEEEECCCCCEEEEE-c--------CCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceE
Q 021797          165 ERLTLSPSGSLAAIT-D--------SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC  235 (307)
Q Consensus       165 ~~I~lsP~~~lAavt-D--------slGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~  235 (307)
                      +.++++|++..+.++ +        ...+|.++|..++..++-+..-+  ....+.+..                |...+
T Consensus       267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~--~~~~~a~sp----------------DG~~~  328 (368)
T d1mdah_         267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQ----------------DGASD  328 (368)
T ss_dssp             SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECC----------------SSSCE
T ss_pred             eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCC--ceeEEEECC----------------CCCEE
Confidence            458889987655443 2        22479999999999998876432  222233221                11114


Q ss_pred             EEEEcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       236 LVIyaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                      |++.....+.|.|||..+|+.+..+.++++
T Consensus       329 ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~  358 (368)
T d1mdah_         329 NYANSAGTEVLDIYDAASDQDQSSVELDKG  358 (368)
T ss_dssp             EEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred             EEEEeCCCCeEEEEECCCCCEEEEEECCCC
Confidence            567778889999999999999999998764

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.27  E-value=0.18  Score=44.36  Aligned_cols=68  Identities=13%  Similarity=0.109  Sum_probs=44.9

Q ss_pred             CEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeecCC
Q 021797          174 SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRT  253 (307)
Q Consensus       174 ~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~  253 (307)
                      -++++....|+|.|||+.++.+++-.++...  ..=+..  ..              |.. +|+ -+-+.|.|.||++.+
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~--~~~vaf--SP--------------DGk-~l~-~~~~d~~v~vwd~~t   92 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRM--SA--------------SGR-YLL-VIGRDARIDMIDLWA   92 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSEEEEEECCSS--EEEEEE--CT--------------TSC-EEE-EEETTSEEEEEETTS
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCCC--eeEEEE--CC--------------CCC-EEE-EEeCCCCEEEEEccC
Confidence            3445566789999999999999999988642  211221  11              112 222 245789999999999


Q ss_pred             CCeEEEEE
Q 021797          254 GPRLLTIQ  261 (307)
Q Consensus       254 G~RV~a~~  261 (307)
                      +.......
T Consensus        93 ~~~~~~~~  100 (426)
T d1hzua2          93 KEPTKVAE  100 (426)
T ss_dssp             SSCEEEEE
T ss_pred             CceeEEEE
Confidence            88544433

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=92.84  E-value=0.54  Score=39.06  Aligned_cols=71  Identities=6%  Similarity=-0.033  Sum_probs=47.8

Q ss_pred             EEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEEeecCCCCe
Q 021797          177 AITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPR  256 (307)
Q Consensus       177 avtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEVW~~~~G~R  256 (307)
                      +.....+.|.++|+.++..++..+.=+.  ...+.+..+                ....|++-....|.|.|||+.+|++
T Consensus       292 ~~~~~~~~v~~~d~~t~~~~~~~~~~~~--~~~~a~spD----------------G~~~l~vt~~~d~~v~v~D~~tg~~  353 (373)
T d2madh_         292 KLHAAAKEVTSVTGLVGQTSSQISLGHD--VDAISVAQD----------------GGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             EeecCCCeEEEEECCCCcEEEEecCCCC--eeEEEECCC----------------CCEEEEEEeCCCCeEEEEECCCCCE
Confidence            3445667899999999988876643222  223332211                1113556678889999999999999


Q ss_pred             EEEEE-ecCC
Q 021797          257 LLTIQ-CAKG  265 (307)
Q Consensus       257 V~a~~-v~~~  265 (307)
                      +..+. +++.
T Consensus       354 ~~~~~~~g~~  363 (373)
T d2madh_         354 DQSTVELGSG  363 (373)
T ss_pred             EEEECCCCCC
Confidence            99986 5544

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.78  E-value=0.12  Score=40.96  Aligned_cols=42  Identities=14%  Similarity=0.143  Sum_probs=36.1

Q ss_pred             CceeeEEEECCCCCEEEEEcCCCcEEEEEcCCceeEEeeccc
Q 021797          161 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY  202 (307)
Q Consensus       161 ~R~~~~I~lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGy  202 (307)
                      ...+.+|+.+|+++++|+....|.|.|+|+.++..++....+
T Consensus       251 ~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~  292 (342)
T d1yfqa_         251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF  292 (342)
T ss_dssp             CCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred             cccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC
Confidence            344678999999999999999999999999999998877544

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.7  Score=35.61  Aligned_cols=75  Identities=13%  Similarity=0.248  Sum_probs=53.4

Q ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCCeEEE
Q 021797          169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEV  248 (307)
Q Consensus       169 lsP~~~lAavtDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg~lEV  248 (307)
                      +.+...+..+....|.|.++|+.++..+...+|+...-+. +..  .              . .   .++.+..+|.|.|
T Consensus       144 ~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~-~~~--~--------------~-~---~l~~~~~dg~i~i  202 (293)
T d1p22a2         144 VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC-LQY--R--------------D-R---LVVSGSSDNTIRL  202 (293)
T ss_dssp             EEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE-EEE--E--------------T-T---EEEEEETTSCEEE
T ss_pred             ceecccccccccCCCceeeecCCCCcEEEEEccccccccc-ccC--C--------------C-C---eEEEecCCCEEEE
Confidence            3445556666667799999999999999999988774322 211  0              0 1   3456677899999


Q ss_pred             eecCCCCeEEEEEecC
Q 021797          249 WQMRTGPRLLTIQCAK  264 (307)
Q Consensus       249 W~~~~G~RV~a~~v~~  264 (307)
                      |+++++..+..+....
T Consensus       203 ~d~~~~~~~~~~~~~~  218 (293)
T d1p22a2         203 WDIECGACLRVLEGHE  218 (293)
T ss_dssp             EETTTCCEEEEECCCS
T ss_pred             Eecccceeeeeecccc
Confidence            9999999888776443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=91.22  E-value=1.1  Score=37.91  Aligned_cols=79  Identities=13%  Similarity=-0.004  Sum_probs=49.9

Q ss_pred             ECCCCCEE--EE-E--cCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEE-E----
Q 021797          169 LSPSGSLA--AI-T--DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA-I----  238 (307)
Q Consensus       169 lsP~~~lA--av-t--DslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LV-I----  238 (307)
                      .+|+++-.  +. +  +..++|.++|..++.++++..+.-....+|-     .|            . ..++.. .    
T Consensus        27 ~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~s-----pD------------g-~~i~~~~~~~~~   88 (368)
T d1mdah_          27 PGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAG-----HS------------G-SDFALASTSFAR   88 (368)
T ss_dssp             CCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEEC-----TT------------S-SCEEEEEEEETT
T ss_pred             cCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCCcceEC-----CC------------C-CEEEEEcccCcc
Confidence            35666532  22 2  3456899999999999999877655443332     11            0 111111 1    


Q ss_pred             --EcCCCCeEEEeecCCCCeEEEEEecCC
Q 021797          239 --HAPRKGIIEVWQMRTGPRLLTIQCAKG  265 (307)
Q Consensus       239 --yaprRg~lEVW~~~~G~RV~a~~v~~~  265 (307)
                        +..+.+.|+||+..++..+..+.++.+
T Consensus        89 ~~~g~~d~~v~v~D~~t~~~~~~i~~p~~  117 (368)
T d1mdah_          89 SAKGKRTDYVEVFDPVTFLPIADIELPDA  117 (368)
T ss_dssp             TTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred             ccccccCCeEEEEECCCCcEeeeecCCcc
Confidence              124568899999999999998876543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.64  E-value=1.3  Score=35.30  Aligned_cols=76  Identities=13%  Similarity=0.077  Sum_probs=44.6

Q ss_pred             EEEECCCCCEEEE-EcCCCcEEEEEcCCceeEEeecccccceeeEEEEEecccccccccccCCCCCCcceEEEEEcCCCC
Q 021797          166 RLTLSPSGSLAAI-TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG  244 (307)
Q Consensus       166 ~I~lsP~~~lAav-tDslGRV~LiD~~~~~ivRmWKGyRDAqc~Wi~~~~~~~~~~~~~~~~~~k~~~~l~LVIyaprRg  244 (307)
                      ..+++|++.++++ ++..+.|-++|+.......-.+.--+..+.-+...                ++.. +| +-+-.+|
T Consensus       123 ~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s----------------~~~~-~l-~~g~~dg  184 (287)
T d1pgua2         123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS----------------PSET-YI-AAGDVMG  184 (287)
T ss_dssp             EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEEC----------------TTSS-EE-EEEETTS
T ss_pred             eeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEec----------------cCcc-cc-ccccccc
Confidence            4567787766665 56666789999887766554443222222222211                0111 33 3445689


Q ss_pred             eEEEeecCCCCeEEE
Q 021797          245 IIEVWQMRTGPRLLT  259 (307)
Q Consensus       245 ~lEVW~~~~G~RV~a  259 (307)
                      .|.||+++++..+..
T Consensus       185 ~i~i~d~~~~~~~~~  199 (287)
T d1pgua2         185 KILLYDLQSREVKTS  199 (287)
T ss_dssp             CEEEEETTTTEEEEC
T ss_pred             cccceeecccccccc
Confidence            999999988876554

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=87.62  E-value=1  Score=36.12  Aligned_cols=37  Identities=16%  Similarity=0.169  Sum_probs=28.5

Q ss_pred             ccCCCceeeEEEECCCCCEEEEE-cCCCcEEEEEcCCc
Q 021797          157 LKDHPRKGERLTLSPSGSLAAIT-DSLGRILLLDTQAL  193 (307)
Q Consensus       157 l~D~~R~~~~I~lsP~~~lAavt-DslGRV~LiD~~~~  193 (307)
                      ..+.......|++||||+++.++ ...|+|.++|+...
T Consensus        32 ~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~   69 (333)
T d1ri6a_          32 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD   69 (333)
T ss_dssp             EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             EEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCC
Confidence            34566778899999999877554 45799999988654