Citrus Sinensis ID: 021847

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
Protein Sequence
MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNCWIDPYSQSLK
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEccccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHcccHHHHccEEEEEEEccccccccccHHHHHHHHHHHccccccccccccccEEEEEEEEEEcccEEEcEEcccccccccccccccccEEEEEcccccHHHHHHHHHHHccccccccHHHHccccccccccccEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEEEEcHcHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEccccccccccccccHHHHHEHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcHEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
mrplwgfpksdnssfSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYdgvvdqwktfewcdrVIHVSAANQTKWWFakrflhpdiVAEYSYIFlwdedlgvedfnpqKYVSIVKSegleisqpaldpaksevhhqitarsqrsivhrrtykpglcdknstappctgwieMMAPVFSRAAWRCVWYLIQNDLIHAWGldmqlgycaqgdrtknvgvvdAEYVvhygrptlgvpekktdlleigfspetenithvmtktsshshkkdprleVRRQSFLEFKIFKRRWIQAAkkdncwidpysqslk
Flexible Loop (DISEMBL)
mrplwgfpksdnSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHhqitarsqrsivhrrtykpglcdknstAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHygrptlgvpekktDLLEIGFSPETENITHVmtktsshshkkdprlevrRQSFLEFKIFKrrwiqaakkdncwidpysqslk
Low Complexity Region (SEG)
MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNCWIDPYSQSLK
Disordered region (IsUnstruct)
*************SFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKS****************************IVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEIGF****************************RQSFLEFKIFKRRWIQAAKKDNCWIDP******
Disordered Region (DISOPRED)
**P*************LFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGV****************************************RQSFLEFKIFKRRWIQAAKKDNCW**PY*****
Disordered Region (DISEMBL)
MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPAL******************IVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEIGFSPETENITHV*************RLEVRRQSFLEFKIFKRRWIQAAKKDNCWIDPYSQSLK
Disordered Region (DISPRO)
****WGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTL*************************************RLEVRRQSFLEFKIFKRRWIQAAKKDNCWIDPYS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNCWIDPYSQSLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
255543122	389	conserved hypothetical protein [Ricinus	0.934	0.735	0.736	1e-133
449449621	388	PREDICTED: uncharacterized protein LOC10	0.934	0.737	0.685	1e-126
359476620	466	PREDICTED: uncharacterized protein LOC10	0.986	0.648	0.671	1e-121
297735287	413	unnamed protein product [Vitis vinifera]	0.986	0.731	0.671	1e-121
356566943	382	PREDICTED: uncharacterized protein LOC10	0.911	0.730	0.666	1e-118
356574842	387	PREDICTED: uncharacterized protein LOC10	0.911	0.720	0.672	1e-117
356530023	343	PREDICTED: uncharacterized protein LOC10	0.911	0.813	0.660	1e-117
356533684	326	PREDICTED: uncharacterized protein LOC10	0.905	0.849	0.675	1e-117
359486223	413	PREDICTED: uncharacterized protein LOC10	0.986	0.731	0.649	1e-114
240255999	389	uncharacterized protein [Arabidopsis tha	0.947	0.745	0.642	1e-110

>gi|255543122|ref|XP_002512624.1| conserved hypothetical protein [Ricinus communis] gi|223548585|gb|EEF50076.1| conserved hypothetical protein [Ricinus communis]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/307 (73%), Positives = 256/307 (83%), Gaps = 21/307 (6%)

Query: 1   MRPLWGFPKSD-NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTF 59
           MRPLWGFP++D  SS +LF +A GIKQ D+VDKMV KFLSS FSVMLFHYDGVVD+W  +
Sbjct: 90  MRPLWGFPENDETSSINLFTLAVGIKQRDIVDKMVKKFLSSKFSVMLFHYDGVVDEWNDY 149

Query: 60  EWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG 119
           EW D+VIH+SA NQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVE+F+PQ+Y+SIVKS+G
Sbjct: 150 EWKDQVIHISAHNQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVENFDPQQYLSIVKSKG 209

Query: 120 LEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFSR 179
           LEISQPALDP KS +H QITAR +RSIVH RT+KPG CD NSTAPPCTGW+EMMAPVFSR
Sbjct: 210 LEISQPALDPGKSAIHQQITARLRRSIVHSRTFKPGTCDGNSTAPPCTGWVEMMAPVFSR 269

Query: 180 AAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTD 239
           AAWRCVWY+IQNDLIHAWGLD QLGYCAQGDR KN+GVVDAEY+VHYGRPTLG   +   
Sbjct: 270 AAWRCVWYMIQNDLIHAWGLDYQLGYCAQGDRVKNIGVVDAEYIVHYGRPTLGGTGE--- 326

Query: 240 LLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNCWID 299
                            +K  S S+KKDPRLEVRRQSF+EFKIF++RW +AAK+D CWID
Sbjct: 327 -----------------SKEPSRSNKKDPRLEVRRQSFVEFKIFQKRWEKAAKEDKCWID 369

Query: 300 PYSQSLK 306
           PY Q+ K
Sbjct: 370 PYEQAEK 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449621|ref|XP_004142563.1| PREDICTED: uncharacterized protein LOC101221459 [Cucumis sativus]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/315 (68%), Positives = 254/315 (80%), Gaps = 29/315 (9%)

Query: 1   MRPLWGFPKSD-----NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQ 55
           MRPLWG  K       NSS ++FA+A GIKQ DLV+KMVTKFLSS+F+VMLFHYDG+VD+
Sbjct: 90  MRPLWGASKRSYQNPVNSSSNIFAMAVGIKQKDLVNKMVTKFLSSDFAVMLFHYDGIVDE 149

Query: 56  WKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIV 115
           WK F W +RVIHV+A NQTKWWFAKRFLHPDIV EY+Y+FLWDEDLGV++FNP+ YV I+
Sbjct: 150 WKGFNWSNRVIHVTAVNQTKWWFAKRFLHPDIVEEYNYVFLWDEDLGVDNFNPKLYVDII 209

Query: 116 KSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPG----LCDKNSTAPPCTGWIE 171
           +SEGLEISQPALDP KSEVHHQITAR +RS VHRRT++P      CD NSTAPPCTGWIE
Sbjct: 210 QSEGLEISQPALDPYKSEVHHQITARGRRSTVHRRTFRPSNGGKGCDVNSTAPPCTGWIE 269

Query: 172 MMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTL 231
           MMAPVFSRAAWRCVWY+IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVD+EYV+HYGRPTL
Sbjct: 270 MMAPVFSRAAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDSEYVIHYGRPTL 329

Query: 232 GVPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAA 291
           G PE+                     +TSS SH KD R +VRRQS++E  +F++RW +AA
Sbjct: 330 GGPEE--------------------NETSSKSHVKDHRADVRRQSYIELDVFRKRWQKAA 369

Query: 292 KKDNCWIDPYSQSLK 306
           ++D CW DPY ++++
Sbjct: 370 EQDECWQDPYPETVE 384

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476620|ref|XP_002272495.2| PREDICTED: uncharacterized protein LOC100244499 [Vitis vinifera]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/317 (67%), Positives = 251/317 (79%), Gaps = 15/317 (4%)

Query: 1   MRPLWGFPKS-DNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTF 59
           MRPLWGFPK   +   +L A+A G+KQ DLV+KMV KFLS  F VMLFHYDGVVD+WK F
Sbjct: 144 MRPLWGFPKKRKDLKRNLLAVAVGVKQKDLVNKMVEKFLSYGFVVMLFHYDGVVDEWKDF 203

Query: 60  EWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG 119
           +WCDRV+HV+A NQTKWWFAKRFLHP+IVAEY+YIFLWDEDLGV DFNP++YV+ V+ EG
Sbjct: 204 KWCDRVLHVAAINQTKWWFAKRFLHPEIVAEYNYIFLWDEDLGVTDFNPRRYVATVQREG 263

Query: 120 LEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPG----LCDKNSTAPPCTGWIEMMAP 175
           LEISQPALD +KSEVHHQIT R +RS VHRR +K      +CD+NSTAPPCTGWIE+MAP
Sbjct: 264 LEISQPALDGSKSEVHHQITLRGRRSDVHRRIFKSSGSGKICDENSTAPPCTGWIEVMAP 323

Query: 176 VFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGV-- 233
           VFSR AWRCVWY+IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVD++Y+VHYG PTLG   
Sbjct: 324 VFSREAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDSDYIVHYGLPTLGAND 383

Query: 234 PEKKTDLLEIGFSPETENI-------THVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRR 286
           P+K T  ++   S E E I       T +    +S +   + R+EVRRQS++E+ IFK+R
Sbjct: 384 PDKTTPPVQDDDS-EPEKITTTTTAETPISKLPASSTSPINFRVEVRRQSYIEYNIFKKR 442

Query: 287 WIQAAKKDNCWIDPYSQ 303
           W QA K+D CW DPY Q
Sbjct: 443 WRQAVKEDKCWKDPYQQ 459

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735287|emb|CBI17649.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/317 (67%), Positives = 251/317 (79%), Gaps = 15/317 (4%)

Query: 1   MRPLWGFPKS-DNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTF 59
           MRPLWGFPK   +   +L A+A G+KQ DLV+KMV KFLS  F VMLFHYDGVVD+WK F
Sbjct: 91  MRPLWGFPKKRKDLKRNLLAVAVGVKQKDLVNKMVEKFLSYGFVVMLFHYDGVVDEWKDF 150

Query: 60  EWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG 119
           +WCDRV+HV+A NQTKWWFAKRFLHP+IVAEY+YIFLWDEDLGV DFNP++YV+ V+ EG
Sbjct: 151 KWCDRVLHVAAINQTKWWFAKRFLHPEIVAEYNYIFLWDEDLGVTDFNPRRYVATVQREG 210

Query: 120 LEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPG----LCDKNSTAPPCTGWIEMMAP 175
           LEISQPALD +KSEVHHQIT R +RS VHRR +K      +CD+NSTAPPCTGWIE+MAP
Sbjct: 211 LEISQPALDGSKSEVHHQITLRGRRSDVHRRIFKSSGSGKICDENSTAPPCTGWIEVMAP 270

Query: 176 VFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGV-- 233
           VFSR AWRCVWY+IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVD++Y+VHYG PTLG   
Sbjct: 271 VFSREAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDSDYIVHYGLPTLGAND 330

Query: 234 PEKKTDLLEIGFSPETENI-------THVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRR 286
           P+K T  ++   S E E I       T +    +S +   + R+EVRRQS++E+ IFK+R
Sbjct: 331 PDKTTPPVQDDDS-EPEKITTTTTAETPISKLPASSTSPINFRVEVRRQSYIEYNIFKKR 389

Query: 287 WIQAAKKDNCWIDPYSQ 303
           W QA K+D CW DPY Q
Sbjct: 390 WRQAVKEDKCWKDPYQQ 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566943|ref|XP_003551684.1| PREDICTED: uncharacterized protein LOC100798633 [Glycine max]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/309 (66%), Positives = 242/309 (78%), Gaps = 30/309 (9%)

Query: 1   MRPLWGFPKS----DNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQW 56
           MR LW  P +    +N+S +LFA+A GIKQ DLV+K+V KFLSSNF VMLFHYDG+VD+W
Sbjct: 95  MRHLWDLPMTKTIEENASTNLFAMAVGIKQKDLVNKLVKKFLSSNFVVMLFHYDGIVDEW 154

Query: 57  KTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVK 116
             FEW + VIHV+ ANQ+KWWFAKRFLHPDIVAEY YIFLWDEDLGVE F+P +YVSI+K
Sbjct: 155 NDFEWNNHVIHVAVANQSKWWFAKRFLHPDIVAEYGYIFLWDEDLGVEHFHPDRYVSIIK 214

Query: 117 SEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPG----LCDKNSTAPPCTGWIEM 172
           SEGLEISQPALD  KSEVHHQITAR +RS VHRR YK G     CD++STAPPCTGW+EM
Sbjct: 215 SEGLEISQPALDSNKSEVHHQITARGRRSNVHRRIYKTGGSGKRCDESSTAPPCTGWVEM 274

Query: 173 MAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
           MAPVFSRAAWRCVWY+IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEY+VHYG PTLG
Sbjct: 275 MAPVFSRAAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYIVHYGHPTLG 334

Query: 233 VPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAK 292
                 D+ E+                   S  KD R++VRR S+ E ++F++RW +A +
Sbjct: 335 ----GLDVNEVS------------------SRTKDHRVDVRRLSYRELQVFRKRWQKAVE 372

Query: 293 KDNCWIDPY 301
           +D+CW+DP+
Sbjct: 373 EDDCWVDPF 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574842|ref|XP_003555553.1| PREDICTED: uncharacterized protein LOC100802412 [Glycine max]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/305 (67%), Positives = 233/305 (76%), Gaps = 26/305 (8%)

Query: 1   MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFE 60
           +RPLW  P       +LFA+  GIKQ DLV+KMV KF+ SNF VMLFHYDG+VD+WK  E
Sbjct: 104 LRPLWNPPMPKKGRPNLFAMVVGIKQKDLVNKMVKKFIDSNFVVMLFHYDGIVDEWKDLE 163

Query: 61  WCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGL 120
           W  RVIHVSA +Q+KWWFAKRFLHPDIVAEY YIFLWDEDLGVE F+P KYVSI+K EGL
Sbjct: 164 WSSRVIHVSAIDQSKWWFAKRFLHPDIVAEYDYIFLWDEDLGVEHFHPDKYVSIIKREGL 223

Query: 121 EISQPALDPAKSEVHHQITARSQRSIVHRRTYKPG----LCDKNSTAPPCTGWIEMMAPV 176
           EISQPALDP KSEVHHQITAR +RS VHRRTY+       CDK+STAPPCTGWIEMMAPV
Sbjct: 224 EISQPALDPKKSEVHHQITARGRRSSVHRRTYRASNDGKGCDKSSTAPPCTGWIEMMAPV 283

Query: 177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEK 236
           FSRAAWRCVWY+IQNDLIHAWGLDMQLGYCAQGDRTK VGVVDAEY+VHY RPTLG    
Sbjct: 284 FSRAAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKKVGVVDAEYIVHYNRPTLG---- 339

Query: 237 KTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNC 296
                              + KT   S +KD R++VRR S+ E  IF++RW +A ++D C
Sbjct: 340 ------------------GIDKTMVSSQEKDHRVDVRRLSYQELDIFRKRWEKAVEEDKC 381

Query: 297 WIDPY 301
           W+DP+
Sbjct: 382 WVDPF 386

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530023|ref|XP_003533584.1| PREDICTED: uncharacterized protein LOC100814260 [Glycine max]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/309 (66%), Positives = 240/309 (77%), Gaps = 30/309 (9%)

Query: 1   MRPLWGFPKS----DNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQW 56
           MR LW    +    +N+S +LFA+A GIKQ DLV+KMV KFL SNF VMLFHYDG+VD+W
Sbjct: 56  MRHLWDLHMTKTIEENTSTNLFAMAVGIKQKDLVNKMVKKFLVSNFVVMLFHYDGIVDEW 115

Query: 57  KTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVK 116
             FEW ++VIHV+ ANQ+KWWFAKRFLHPDIVAEY YIFLWDEDLGVE F+P +YVSI+K
Sbjct: 116 NDFEWNNQVIHVAVANQSKWWFAKRFLHPDIVAEYGYIFLWDEDLGVEHFHPDRYVSIIK 175

Query: 117 SEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGL----CDKNSTAPPCTGWIEM 172
           SEGLEISQPALD  KSEVHHQITAR +RS VHRR YK G+    CD +STAPPCTGW+EM
Sbjct: 176 SEGLEISQPALDSEKSEVHHQITARGRRSNVHRRIYKSGVSGKRCDGSSTAPPCTGWVEM 235

Query: 173 MAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
           MAPVFSRAAWRC+WY+IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEY+VHYG PTLG
Sbjct: 236 MAPVFSRAAWRCIWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYIVHYGHPTLG 295

Query: 233 VPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAK 292
                 D+ E+                   S  KD R++VRR S+ E ++F++RW +A +
Sbjct: 296 ----GLDVHEVS------------------SRTKDHRVDVRRLSYRELQVFRKRWQKAVE 333

Query: 293 KDNCWIDPY 301
           +D CW+DP+
Sbjct: 334 EDECWVDPF 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533684|ref|XP_003535390.1| PREDICTED: uncharacterized protein LOC100807140 [Glycine max]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/305 (67%), Positives = 235/305 (77%), Gaps = 28/305 (9%)

Query: 1   MRPLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFE 60
           +RPLW  P   N+S +LFA+A GIKQ DLV KMV KF+ SNF VMLFHYDG+VD+WK  E
Sbjct: 45  LRPLWNPPV--NASTNLFAMAVGIKQKDLVSKMVKKFIDSNFVVMLFHYDGIVDEWKDLE 102

Query: 61  WCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGL 120
           W   VIHVSA +Q+KWWFAKRFLHPDIV EY YIFLWDEDLGVE F+P KYVSI+K EGL
Sbjct: 103 WSSLVIHVSAIDQSKWWFAKRFLHPDIVTEYDYIFLWDEDLGVEHFHPDKYVSIIKREGL 162

Query: 121 EISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGL----CDKNSTAPPCTGWIEMMAPV 176
           EISQPALDP KSEVHHQITAR +RS VHRRTYK       CDK+STAPPCTGWIEMMAPV
Sbjct: 163 EISQPALDPKKSEVHHQITARGRRSSVHRRTYKASNDGKGCDKSSTAPPCTGWIEMMAPV 222

Query: 177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEK 236
           FSRAAWRCVWY+IQNDLIHAWGLD+QLGYCAQGDRTKNVGVVDAEY+VHY RPTLG    
Sbjct: 223 FSRAAWRCVWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDAEYIVHYNRPTLG---- 278

Query: 237 KTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNC 296
                          I + M      S +KD R++VRR S+ E  +F++RW +A ++D C
Sbjct: 279 --------------GIDNTMVS----SQEKDHRVDVRRLSYQELDVFRKRWEKAVEEDKC 320

Query: 297 WIDPY 301
           W+DP+
Sbjct: 321 WVDPF 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/311 (64%), Positives = 239/311 (76%), Gaps = 9/311 (2%)

Query: 1   MRPLWGFP---KSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWK 57
           ++PLWG     +  + S SL A+A GIKQ ++V+++V KF+ SNF VMLFHYDGVVD+W+
Sbjct: 97  VQPLWGATLNGEKSSPSKSLLAMAVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWR 156

Query: 58  TFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKS 117
            F W D  IHV+  NQTKWWFAKRFLHPDIVAEY+YIFLWDEDLGVE+F+P +YVSIV+ 
Sbjct: 157 EFAWSDHAIHVTVVNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVED 216

Query: 118 EGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYK---PGLCDKNSTAPPCTGWIEMMA 174
           EGLEISQPALDP KS VHHQITAR + S VHRRTYK    G CD  STAPPC GW+EMMA
Sbjct: 217 EGLEISQPALDPKKSRVHHQITARVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMA 276

Query: 175 PVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVP 234
           PVFS+AAWRCVW++IQN+LIHAWG+DMQLGYCAQGDRTKNVGVVD+EYVVH   PTLGV 
Sbjct: 277 PVFSKAAWRCVWHMIQNELIHAWGVDMQLGYCAQGDRTKNVGVVDSEYVVHLALPTLGVL 336

Query: 235 EKKTDLLEIG--FSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAK 292
           + + +L   G   S   E +   +    S  HK D R  VRRQSF+E +IF+ RW  A K
Sbjct: 337 D-ENELRGEGHDHSSLREKLPKSVALAQSEFHKVDNRSAVRRQSFIEMQIFRSRWANAVK 395

Query: 293 KDNCWIDPYSQ 303
           +D CWIDPY+Q
Sbjct: 396 EDKCWIDPYAQ 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/305 (64%), Positives = 225/305 (73%), Gaps = 15/305 (4%)

Query: 4   LWGF----PKSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTF 59
           LW +     +  N S SL A+A GIKQ +LV+K++ KF   +F+VMLFHYDGVVD WK +
Sbjct: 93  LWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQY 152

Query: 60  EWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG 119
            W +  IHVS  NQTKWWFAKRFLHPDIVAEY YIFLWDEDLGV  FNPQ+Y+SIVK EG
Sbjct: 153 PWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEG 212

Query: 120 LEISQPALDPAKSEVHHQITARSQRSIVHRRTYK---PGLCDKNSTAPPCTGWIEMMAPV 176
           LEISQPALD +KSEVHH ITAR ++S VHRR YK    G CD +ST PPC GW+EMMAPV
Sbjct: 213 LEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPV 272

Query: 177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEK 236
           FSRAAWRC WY+IQNDLIHAWGLD QLGYCAQGDR KNVGVVDAEY++HYG PTLGV E 
Sbjct: 273 FSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGVVET 332

Query: 237 KTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNC 296
            +  L         N T   +  S  S + D R EVR +SF+E K FK RW +A + D C
Sbjct: 333 ASSAL--------RNETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTC 384

Query: 297 WIDPY 301
           W+DPY
Sbjct: 385 WVDPY 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.947	0.745	0.642	7.5e-105
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.950	0.664	0.547	4.6e-89
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.960	0.691	0.541	1.6e-86
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.748	0.601	0.508	7.7e-66
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.767	0.581	0.520	4.7e-64
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.741	0.570	0.512	1.6e-63
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.745	0.575	0.512	8.8e-63
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.745	0.568	0.497	1.1e-62
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.745	0.596	0.493	1e-61
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.745	0.609	0.493	1e-61

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 196/305 (64%), Positives = 225/305 (73%)

Query:     4 LWGFP----KSDNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTF 59
             LW +     +  N S SL A+A GIKQ +LV+K++ KF   +F+VMLFHYDGVVD WK +
Sbjct:    93 LWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQY 152

Query:    60 EWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG 119
              W +  IHVS  NQTKWWFAKRFLHPDIVAEY YIFLWDEDLGV  FNPQ+Y+SIVK EG
Sbjct:   153 PWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEG 212

Query:   120 LEISQPALDPAKSEVHHQITARSQRSIVHRRTYK---PGLCDKNSTAPPCTGWIEMMAPV 176
             LEISQPALD +KSEVHH ITAR ++S VHRR YK    G CD +ST PPC GW+EMMAPV
Sbjct:   213 LEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPV 272

Query:   177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEK 236
             FSRAAWRC WY+IQNDLIHAWGLD QLGYCAQGDR KNVGVVDAEY++HYG PTLGV E 
Sbjct:   273 FSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGVVET 332

Query:   237 KTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKDNC 296
              +  L         N T   +  S  S + D R EVR +SF+E K FK RW +A + D C
Sbjct:   333 ASSALR--------NETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTC 384

Query:   297 WIDPY 301
             W+DPY
Sbjct:   385 WVDPY 389

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 172/314 (54%), Positives = 219/314 (69%)

Query:     1 MRPLW--GFPKS---DNSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQ 55
             ++PLW  G  +S   + ++ +L AI  G+KQ   VD +V KFL +NF+++LFHYDG +D+
Sbjct:    98 LKPLWSRGSLRSKGVEMTNRNLLAIPVGLKQKGNVDALVKKFLPANFTIVLFHYDGNMDK 157

Query:    56 WKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIV 115
             W   EW  + IH+ A NQTKWWFAKRFLHPD+V+ Y YIFLWDEDLGVE+FNP++Y+ IV
Sbjct:   158 WWDLEWSSKSIHIVAQNQTKWWFAKRFLHPDVVSIYDYIFLWDEDLGVENFNPERYLKIV 217

Query:   116 KSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPG--LCDKNSTAPPCTGWIEM 172
             KS GLEISQPALD   +E+HH+IT RS+    HRR Y   G   C   S+ PPCTG++E 
Sbjct:   218 KSVGLEISQPALDHNSTEIHHKITLRSKTKKFHRRVYINRGHKRCSNTSSDPPCTGFVEG 277

Query:   173 MAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             MAPVFS+AAW C W LIQNDL+H WG+DM+LGYCAQGDRTKNVG+VD+EY++H G  TLG
Sbjct:   278 MAPVFSKAAWLCTWNLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIVDSEYILHQGIQTLG 337

Query:   233 --VPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQA 290
               VPEKK    ++G            T+   H+   D R E+RRQS  E + FK RW +A
Sbjct:   338 ESVPEKKKTARDVG------------TRRQGHT-TFDSRTEIRRQSTWELQTFKERWSKA 384

Query:   291 AKKDNCWIDPYSQS 304
              ++D  WIDP S S
Sbjct:   385 VEEDIKWIDPSSSS 398

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 169/312 (54%), Positives = 209/312 (66%)

Query:     1 MRPLWGFP----KSDN-SSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQ 55
             ++PLW       KS   ++ +L A+  G+KQ D VD +V KFL +NF+V+LFHYDG +DQ
Sbjct:    95 LKPLWSSSSLRSKSGELTNRNLLAMPVGLKQKDNVDAVVKKFLPANFTVILFHYDGNMDQ 154

Query:    56 WKTFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIV 115
             W   EW  + IH+ A NQTKWWFAKRFLHPDIV+ Y Y+FLWDEDLGVE+FNPQKY+ IV
Sbjct:   155 WWDLEWSSKAIHIVAHNQTKWWFAKRFLHPDIVSIYDYVFLWDEDLGVENFNPQKYLRIV 214

Query:   116 KSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKP-G--LCDKNSTAPPCTGWIEM 172
             K+ GLEISQPAL P  +EVHH+IT RS+  I HRR Y   G   C   S  PPCTG++E 
Sbjct:   215 KTAGLEISQPALHPNSTEVHHRITVRSRTKIFHRRVYDSRGNMKCSNASEGPPCTGFVEG 274

Query:   173 MAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             MAPVFSR+AW C W LIQNDL+H WG+DM+LGYCAQGDR+K VG+VD+EY+ H G  TLG
Sbjct:   275 MAPVFSRSAWFCTWNLIQNDLVHGWGMDMKLGYCAQGDRSKKVGIVDSEYIFHQGIQTLG 334

Query:   233 VPEKKTDLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAK 292
                        G+ P+ +N           S   D R E+RRQS  E + FK RW QA  
Sbjct:   335 GS---------GY-PDKKNSARSGVNRRRGSATFDSRTEIRRQSTWELQAFKERWNQAVA 384

Query:   293 KDNCWIDPYSQS 304
             +D  W++  S S
Sbjct:   385 EDKYWVERSSPS 396

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
 Identities = 120/236 (50%), Positives = 153/236 (64%)

Query:     1 MRPLWGFPKSD--NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P  D       L     G  Q   +D  V+KF S NF+++LFHYDGV   W  
Sbjct:    96 LRRLWGNPDEDLVKQPRYLATFTVGYNQRHNIDACVSKF-SENFTIVLFHYDGVTSAWND 154

Query:    59 -FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKS 117
              FEW    IH+S   QTKWW+AKRFLHPDIVA Y YIF+WDEDLGV+ FN ++Y+ IVK 
Sbjct:   155 EFEWSRNAIHISVKKQTKWWYAKRFLHPDIVARYDYIFIWDEDLGVDHFNAEEYIHIVKK 214

Query:   118 EGLEISQPALDPAKSEVHHQITARSQRSIVHRRT-YKPGLCDKNSTAPPCTGWIEMMAPV 176
               LEISQP LDP ++  + QIT R + S VH+ T  K   C  N   PPC  ++E+MAPV
Sbjct:   215 HDLEISQPGLDP-ETGFNWQITKRREHSEVHKETDEKLDWCS-NPPRPPCAAFVEIMAPV 272

Query:   177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             FSR AWRCVW++IQNDL+H WGLD  L  C +    + +G+VD++++VH   P+LG
Sbjct:   273 FSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEEPAFEKIGIVDSQWIVHQFIPSLG 328

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 126/242 (52%), Positives = 158/242 (65%)

Query:     1 MRPLWGFPKSDNSSFS--LFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P  D  S    L     GI Q   +D  V KF S NF+++LFHYDG V +W  
Sbjct:   120 LRRLWGLPHEDLKSEPRYLATFTVGINQKANIDACVKKF-SENFTIVLFHYDGRVTEWDE 178

Query:    59 FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
             FEW    IH+S   QTKWW+AKRFLHPDIVA Y YIF+WDEDLGVE FN ++YV +VK  
Sbjct:   179 FEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKKH 238

Query:   119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLCDKNSTAPPCTGWIEMMAPVF 177
             GLEISQP L+P +  +  Q+T R     VH+ T  +PG C  +   PPC  ++E+MAPVF
Sbjct:   239 GLEISQPGLEPNQG-LTWQMTKRRGDMEVHKITEERPGWCS-DPHLPPCAAFVEIMAPVF 296

Query:   178 SRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKK 237
             SR AWRCVW++IQNDL+H WGLD  L  C +    K +GVVD+++VVH   P+LG   + 
Sbjct:   297 SRNAWRCVWHVIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWVVHQSFPSLGNQGEA 355

Query:   238 TD 239
             TD
Sbjct:   356 TD 357

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 121/236 (51%), Positives = 159/236 (67%)

Query:     1 MRPLWGFPKSDNSSFSLFAIA--AGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P  D +    + +    G  Q   +D ++ KF S NFS+MLFHYDG   +W+ 
Sbjct:   116 LRRLWGDPNEDLTVKQRYLVTFTVGYDQRKNIDTVLKKF-SDNFSIMLFHYDGRASEWEE 174

Query:    59 FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
             FEW  R IHVS   QTKWW+AKRFLHPDIVA Y YIF+WDEDLGVE F+ +KY+++VK  
Sbjct:   175 FEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLGVEHFDSEKYLAVVKKH 234

Query:   119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLC-DKNSTAPPCTGWIEMMAPV 176
             GLEISQP L+P +  +  ++T +   + VH+    + G C D N   PPC  ++E+MAPV
Sbjct:   235 GLEISQPGLEPYEG-LTWEMTKKRDDTEVHKHAEERNGWCTDPN--LPPCAAFVEIMAPV 291

Query:   177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             FSR AWRCVW++IQNDLIH WGLD  +  C Q    K +GVVDA++++H G P+LG
Sbjct:   292 FSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEK-IGVVDAQWIIHQGVPSLG 346

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 121/236 (51%), Positives = 157/236 (66%)

Query:     1 MRPLWGFPKSDNSSFS---LFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWK 57
             +R LWG PK D        L A     +Q   +D  V KF S NF+++LFHYDG   ++ 
Sbjct:   114 LRRLWGLPKDDLPVVKPKYLVAFTVSYEQRKNIDACVKKF-SDNFTIVLFHYDGKTSEYD 172

Query:    58 TFEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKS 117
              FEW  R IHVS   QTKWW+AKRFLHPDI+A Y YIF+WDEDLGVE+F+ ++Y+ IV  
Sbjct:   173 EFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIFIWDEDLGVENFDAEEYIKIVNK 232

Query:   118 EGLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLCDKNSTAPPCTGWIEMMAPV 176
              GLEISQPA++  KS +  +IT R     VH+    KPG C+ +   PPC G+IE+MAPV
Sbjct:   233 HGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKPGRCN-DPHLPPCAGFIEIMAPV 290

Query:   177 FSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             FSR AWRCVW++IQNDL+H WGLD  L  C +    K +GVVD+++++H   P+LG
Sbjct:   291 FSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQKIPSLG 345

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 117/235 (49%), Positives = 159/235 (67%)

Query:     1 MRPLWGFPKSDN--SSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P+ D       L A   G  Q   VD  V KF S +F+++LFHYDG   +W+ 
Sbjct:   124 LRRLWGLPEEDVPVKPKYLIAFTVGFGQKVNVDACVKKF-SKDFTIVLFHYDGRTTEWEE 182

Query:    59 FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
              EW  R IHVS   QTKWW+AKRFLHPDIVA Y Y+F+WDEDLG+E+F+ ++Y+ ++K  
Sbjct:   183 LEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDEDLGLENFDVEEYIRLIKKH 242

Query:   119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLCDKNSTAPPCTGWIEMMAPVF 177
             GLEISQPA++ +K ++  +IT R  +  VH+    KPG C+ +   PPC  +IE+MAPVF
Sbjct:   243 GLEISQPAVE-SKKKITWEITKRKTKGEVHKDAKEKPGRCN-DPHLPPCAAFIEIMAPVF 300

Query:   178 SRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             SR AWRCVW++IQNDL+H WGLD  L  C +    K +GVVD+++++H   P+LG
Sbjct:   301 SRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQSLPSLG 354

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 116/235 (49%), Positives = 149/235 (63%)

Query:     1 MRPLWGFPKSD--NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P  D       L     G +Q + ++  V KF S +F ++LFHYDG   +W  
Sbjct:   107 LRRLWGEPSEDLKKKPKYLVTFTVGFEQRNNINAAVKKF-SEDFQILLFHYDGRTTEWDQ 165

Query:    59 FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
             FEW    IH+SA  QTKWW+AKRFLHPD+V+ Y YIF+WDEDLGVE FN  +YV +VK  
Sbjct:   166 FEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKH 225

Query:   119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLCDKNSTAPPCTGWIEMMAPVF 177
             GLEISQP L+P           R  R  VH+ T  KPG C  +   PPC  ++E+MAPVF
Sbjct:   226 GLEISQPGLEPNNGLTWEMTKRRGDRD-VHKETKEKPGWCS-DPHLPPCAAFVEIMAPVF 283

Query:   178 SRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             SR AWRCVW++IQNDL+H WGLD  L  C +    K +GVVD+++++H   P+LG
Sbjct:   284 SREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHQVIPSLG 337

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 116/235 (49%), Positives = 150/235 (63%)

Query:     1 MRPLWGFPKSD--NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
             +R LWG P  D       L     G +Q + ++ +V KF S +F ++LFHYDG   +W  
Sbjct:   100 LRRLWGEPNEDLKKKPKYLVTFTVGFEQRNHINGVVKKF-SEDFQILLFHYDGRTTEWDQ 158

Query:    59 FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
             FEW    IH+S   QTKWW+AKRFLHPD+V+ Y YIF+WDEDLGVE FN  KY+ +VK  
Sbjct:   159 FEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADKYIELVKKH 218

Query:   119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTY-KPGLCDKNSTAPPCTGWIEMMAPVF 177
             GLEISQP L+P           R  R  VH+ T  KPG C K+   PPC  ++E+MAPVF
Sbjct:   219 GLEISQPGLEPNNGLTWEMTKRRGDRE-VHKDTKEKPGWC-KDPHLPPCAAFVEIMAPVF 276

Query:   178 SRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG 232
             SR AWRCVW++IQNDL+H WGLD  L  C +    K +GVVD+++++H   P+LG
Sbjct:   277 SREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHKVIPSLG 330


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      306       306   0.00099  115 3  11 22  0.36    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  258 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.54u 0.10s 22.64t   Elapsed:  00:00:02
  Total cpu time:  22.54u 0.10s 22.64t   Elapsed:  00:00:02
  Start:  Fri May 10 15:19:43 2013   End:  Fri May 10 15:19:45 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035311001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (411 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	306
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-130

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  371 bits (955), Expect = e-130
 Identities = 141/296 (47%), Positives = 179/296 (60%), Gaps = 29/296 (9%)

Query: 1   MRPLWGFPKSDNSS--FSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKT 58
           +R LWG P+ D +S    L A   G  Q   VD  V KF S NF+++LFHYDG   +W  
Sbjct: 26  LRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDACVKKF-SDNFTIVLFHYDGRTTEWDE 84

Query: 59  FEWCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118
            EW  + IHVSA  QTKWWFAKRFLHPDIVA Y YIFLWDEDLGV++F+ ++Y+ IVK  
Sbjct: 85  LEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIFLWDEDLGVDNFDAEEYIKIVKKH 144

Query: 119 GLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTGWIEMMAPVFS 178
           GLEISQP LDP + ++  +IT R     VH+ T + G C  NST PPCTG++E+MAPVFS
Sbjct: 145 GLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKGRCCDNSTGPPCTGFVEIMAPVFS 204

Query: 179 RAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKT 238
           R AWRCVW++IQNDL+H WGLD  L  C      + +GVVD+++VVH G P+LG      
Sbjct: 205 RDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAHEKIGVVDSQWVVHQGIPSLGSQGTAE 263

Query: 239 DLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKKD 294
           +                          K P   VR +   E+ +F+RRW  A K+ 
Sbjct: 264 N-------------------------GKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	306
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	93.94
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	92.67
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	92.58
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	92.38
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	89.37
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	87.46
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	86.69
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	86.43
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	86.16
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	84.92
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	81.03
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	80.39
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	80.23

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=1.1e-119  Score=847.46  Aligned_cols=266  Identities=64%  Similarity=1.173  Sum_probs=255.2

Q ss_pred             CCCCCCCCCCC--CCCCeeEEEEecccccccHHHHhhhccCCCceEEEEeecCccCccccccccCceeEEEeeccchhhh
Q 021847            1 MRPLWGFPKSD--NSSFSLFAIAAGIKQSDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWF   78 (306)
Q Consensus         1 ~r~lwg~~~~~--~~~k~Lv~~~VG~kqk~~v~~~v~kf~~~~Fdv~LfhYdg~~d~w~~~ews~~aIhv~~~~qtKww~   78 (306)
                      ||||||+|+++  .++||||||+||+|||++||++|+|| ++|||||||||||++|+|++||||++||||++.|||||||
T Consensus        26 ~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~w~~~~ws~~aiHv~~~kqtKww~  104 (294)
T PF05212_consen   26 LRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDEWDDFEWSDRAIHVSARKQTKWWF  104 (294)
T ss_pred             eeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCchhhcccccceEEEEeccceEEee
Confidence            79999999999  66799999999999999999999999 8999999999999999999999999999999999999999


Q ss_pred             hccccCcccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCC
Q 021847           79 AKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCD  158 (306)
Q Consensus        79 akRflhPdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~  158 (306)
                      ||||||||||++|||||||||||+||+|+|+|||+||++||||||||||++++|++||+||+|++.++|||.+.+.+.|.
T Consensus       105 akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~~~iT~R~~~~~vhr~~~~~~~~~  184 (294)
T PF05212_consen  105 AKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIHHPITKRRPDSEVHRKTRGGPRCC  184 (294)
T ss_pred             hhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceeeeeEEeecCCceeEeccCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999998889999999999999999777788888


Q ss_pred             CCCCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEccccCCCCCCCcc
Q 021847          159 KNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKT  238 (306)
Q Consensus       159 ~~~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~g~Ptlg~~~~~~  238 (306)
                      +++++||||||||||||||||+|||||||||||||+|||||||+|++|+ +++++||||||||||+|+|+||||+++...
T Consensus       185 ~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~~kiGVVDs~~VvH~gvptLG~~~~~~  263 (294)
T PF05212_consen  185 DDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRHKKIGVVDSQYVVHTGVPTLGGQGNSE  263 (294)
T ss_pred             CCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-ccccccEEEEeeEEEEEcCCCcCCCccccc
Confidence            8999999999999999999999999999999999999999999999999 789999999999999999999999965321


Q ss_pred             ccccccCCCCcccccccccccccCCCCCCChHHHHhhhHHHHHHHHHHHHHHHhc
Q 021847          239 DLLEIGFSPETENITHVMTKTSSHSHKKDPRLEVRRQSFLEFKIFKRRWIQAAKK  293 (306)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~r~~~E~~~f~~R~~~A~~~  293 (306)
                                               .+.++|.+||+||++||++|++||++|+++
T Consensus       264 -------------------------~~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~  293 (294)
T PF05212_consen  264 -------------------------KGKDPREEVRRRSFAEMRIFQKRWANAVKE  293 (294)
T ss_pred             -------------------------cCCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                                     145789999999999999999999999986

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.94  E-value=0.17  Score=43.05  Aligned_cols=99  Identities=19%  Similarity=0.245  Sum_probs=63.4

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCCCCCCCCCCcc
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTG  168 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~~ppct~  168 (306)
                      +.+|||++.|+|..++.-.+.++.+.++..++.+..|..-...+                                ++.+
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~  125 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG--------------------------------SFVG  125 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC--------------------------------ceEE
Confidence            57999999999999998888888888775555554443222111                                1112


Q ss_pred             eEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEcccc
Q 021847          169 WIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRP  229 (306)
Q Consensus       169 fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~g~P  229 (306)
                            -+++|++++-+= +.. +.-..||=|.-+.+-+. ..+.++ .+.+..+.|....
T Consensus       126 ------~~~~~~~~~~~g-~~~-~~~~~~~eD~~~~~r~~-~~G~~i-~~~~~~~~h~~~~  176 (202)
T cd04185         126 ------VLISRRVVEKIG-LPD-KEFFIWGDDTEYTLRAS-KAGPGI-YVPDAVVVHKTAI  176 (202)
T ss_pred             ------EEEeHHHHHHhC-CCC-hhhhccchHHHHHHHHH-HcCCcE-EecceEEEEcccc
Confidence                  247888886542 222 22356777766544432 235688 9999999999433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=92.67  E-value=0.45  Score=43.30  Aligned_cols=127  Identities=13%  Similarity=0.099  Sum_probs=70.9

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHh--CCcccCCCc-CCCCCceeeeeeeeeccceecceeccCCCCCCCCCCCC
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSE--GLEISQPAL-DPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPP  165 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~--gLeIsQPAL-d~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~~pp  165 (306)
                      ..+|||++.|+|..++.-.+.++++.+++.  +.-+..|.+ +.+ +....+...... ... +..    .... .+.+.
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~----~~~~-~~~~~  143 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRG-TSRRLPAIHLDG-LLL-RQI----SLDG-LTTPQ  143 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCC-CcccCCceeecc-cce-eee----cccc-cCCce
Confidence            379999999999999999999999988876  567777764 332 211222221111 100 000    0000 00010


Q ss_pred             CcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEc
Q 021847          166 CTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHY  226 (306)
Q Consensus       166 ct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~  226 (306)
                      -+.++=.-..+++|++++.+=.| ..++ -.++.|.-|..-+. ..+.+|.++....+.|.
T Consensus       144 ~~~~~~~sg~li~~~~~~~iG~f-de~~-fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~  201 (281)
T TIGR01556       144 KTSFLISSGCLITREVYQRLGMM-DEEL-FIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHR  201 (281)
T ss_pred             eccEEEcCcceeeHHHHHHhCCc-cHhh-cccchHHHHHHHHH-HCCCEEEEeCCEEEEEe
Confidence            01111001236899999866322 2233 23456766643332 23568999999999997

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=92.58  E-value=2.2  Score=39.31  Aligned_cols=135  Identities=12%  Similarity=0.065  Sum_probs=74.4

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCC-ceeeeeeee-ec---c--ceecceecc-CCCCCCC
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKS-EVHHQITAR-SQ---R--SIVHRRTYK-PGLCDKN  160 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S-~~sh~iT~r-~~---~--~~vhr~~~~-~~~C~~~  160 (306)
                      +..|||+|.|.|..++..-++++++.+....-.+.-|.+..-.+ ...++-... ..   .  ...|..... ...+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            67999999999999999999999999998877777776543211 122221111 00   0  001100000 0000111


Q ss_pred             CCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceeh-hh--HhhhhhhcCCCCCcEEEEeeeeEEEccc
Q 021847          161 STAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWG-LD--MQLGYCAQGDRTKNVGVVDAEYVVHYGR  228 (306)
Q Consensus       161 ~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWG-LD--~~~~~c~~~~~~~kiGVVDa~~V~H~g~  228 (306)
                      +..+..+..+-..+=+|+|++|.-+=.|-. . ...|| =|  +.+.--..|   .+|-++-...|.|...
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vGgfDe-~-~~~~~~ED~Dl~~R~~~~G---~~i~~~p~a~v~H~~~  227 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELGGYDE-G-MDIWGGENLELSFKVWQCG---GSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhCCCCC-c-ccccCchhHHHHHHHHHcC---CeEEEeeccEEEEecc
Confidence            112222333333344688999976643322 2 24455 34  444322233   5799999999999854

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.38  E-value=0.32  Score=38.91  Aligned_cols=91  Identities=18%  Similarity=0.139  Sum_probs=58.8

Q ss_pred             CccEEEEeccccCCCCCChHHHHHHHHHh-CCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCCCCCCCCCCcc
Q 021847           90 EYSYIFLWDEDLGVEDFNPQKYVSIVKSE-GLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPPCTG  168 (306)
Q Consensus        90 ~YdYIflwDDDl~vd~f~i~ry~~ivr~~-gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~~ppct~  168 (306)
                      .+|||++.|+|..++...+.++.+.+.+. +..+..+.                                          
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence            79999999999999888888888765443 22222222                                          


Q ss_pred             eEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEc
Q 021847          169 WIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHY  226 (306)
Q Consensus       169 fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~  226 (306)
                       +=..+.+|++++++-+-.+-. . ...+|-|..+...+. ..+.+|..+....+.|.
T Consensus       112 -~~~~~~~~~~~~~~~~~~~~~-~-~~~~~eD~~~~~~~~-~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         112 -VSGAFLLVRREVFEEVGGFDE-D-FFLYYEDVDLCLRAR-LAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             -CceeeEeeeHHHHHHcCCCCh-h-hhccccHHHHHHHHH-HcCCeEEEccceEEEec
Confidence             001245788999975422211 1 123666776665442 24579999999999997

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=89.37  E-value=1.3  Score=38.44  Aligned_cols=123  Identities=14%  Similarity=0.087  Sum_probs=60.7

Q ss_pred             CccEEEEeccccCCCCCChHHHH---HHHH-HhCCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCCCCCCCCC
Q 021847           90 EYSYIFLWDEDLGVEDFNPQKYV---SIVK-SEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTAPP  165 (306)
Q Consensus        90 ~YdYIflwDDDl~vd~f~i~ry~---~ivr-~~gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~~pp  165 (306)
                      .||||++.|+|..++...+.+++   .... ...+-+..|...........+.. +.....+..     ..+.    ..+
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~----~~~  144 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKLRI-----QKEG----EEG  144 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCcccee-----cccc----cCC
Confidence            58999999999999988888885   2222 22344555543321111111110 100000000     0000    000


Q ss_pred             CcceEE-Ee--ccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEc
Q 021847          166 CTGWIE-MM--APVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHY  226 (306)
Q Consensus       166 ct~fVE-iM--aPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~  226 (306)
                      +. -++ ++  +-+|+|+++..+=.|-. ++ ...|-|+.+...+. ..+.++..+....|.|.
T Consensus       145 ~~-~~~~~~~~~~~~rr~~~~~~ggfd~-~~-~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         145 LK-EVDFLITSGSLISLEALEKVGGFDE-DL-FIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             ce-EeeeeeccceEEcHHHHHHhCCCCH-HH-cCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence            00 111 11  12589999987643322 22 12345655544442 23568999888888887

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=87.46  E-value=1.1  Score=38.62  Aligned_cols=195  Identities=14%  Similarity=0.109  Sum_probs=85.8

Q ss_pred             CeeEEEEecccccccHHHHhhhccC---CCceEEEEeecCccCcccc-c-----cccCceeEEEee---cc--chhhhhc
Q 021847           15 FSLFAIAAGIKQSDLVDKMVTKFLS---SNFSVMLFHYDGVVDQWKT-F-----EWCDRVIHVSAA---NQ--TKWWFAK   80 (306)
Q Consensus        15 k~Lv~~~VG~kqk~~v~~~v~kf~~---~~Fdv~LfhYdg~~d~w~~-~-----ews~~aIhv~~~---~q--tKww~ak   80 (306)
                      +..|++++-...- .+...|+....   .++.|+++. |+..++=.+ +     ++....|++...   .+  +|-.-+.
T Consensus         2 ~v~Vvip~~~~~~-~l~~~l~sl~~~~~~~~~v~vvd-~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n   79 (228)
T PF13641_consen    2 RVSVVIPAYNEDD-VLRRCLESLLAQDYPRLEVVVVD-DGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALN   79 (228)
T ss_dssp             -EEEE--BSS-HH-HHHHHHHHHTTSHHHTEEEEEEE-E-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHH
T ss_pred             EEEEEEEecCCHH-HHHHHHHHHHcCCCCCeEEEEEE-CCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHH
Confidence            4456666544322 45555554432   578888886 343222111 1     133223443222   22  2322222


Q ss_pred             cccCcccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCCCC
Q 021847           81 RFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKN  160 (306)
Q Consensus        81 RflhPdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~  160 (306)
                      ..+.   ...+|||++.|+|..++...+.++++.+...+..+.|+........  ..++.-......+... .-......
T Consensus        80 ~~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~  153 (228)
T PF13641_consen   80 EALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHL-RFRSGRRA  153 (228)
T ss_dssp             HHHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETT-TS-TT-B-
T ss_pred             HHHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhh-hhhhhhcc
Confidence            2221   1459999999999999999999999999778888888665332111  1111111100000000 00000000


Q ss_pred             CCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEc
Q 021847          161 STAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHY  226 (306)
Q Consensus       161 ~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~  226 (306)
                      -..+.++|    -+=+|+|+++.-+-.|-.    ..-|=|+.+...+. ..+.+|.......|.|.
T Consensus       154 ~~~~~~~G----~~~~~rr~~~~~~g~fd~----~~~~eD~~l~~r~~-~~G~~~~~~~~~~v~~~  210 (228)
T PF13641_consen  154 LGVAFLSG----SGMLFRRSALEEVGGFDP----FILGEDFDLCLRLR-AAGWRIVYAPDALVYHE  210 (228)
T ss_dssp             ---S-B------TEEEEEHHHHHHH-S--S----SSSSHHHHHHHHHH-HTT--EEEEEEEEEEE-
T ss_pred             cceeeccC----cEEEEEHHHHHHhCCCCC----CCcccHHHHHHHHH-HCCCcEEEECCcEEEEe
Confidence            00111111    133689999977643322    33447777654432 24578999988888888

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=86.69  E-value=0.77  Score=39.41  Aligned_cols=164  Identities=11%  Similarity=-0.000  Sum_probs=81.6

Q ss_pred             CeeEEEEecccccccHHHHhhhcc---CCCceEEEEeecCccCcc-cccc-c----cCceeEEEeeccchhhhhcc-ccC
Q 021847           15 FSLFAIAAGIKQSDLVDKMVTKFL---SSNFSVMLFHYDGVVDQW-KTFE-W----CDRVIHVSAANQTKWWFAKR-FLH   84 (306)
Q Consensus        15 k~Lv~~~VG~kqk~~v~~~v~kf~---~~~Fdv~LfhYdg~~d~w-~~~e-w----s~~aIhv~~~~qtKww~akR-flh   84 (306)
                      +.-|++||=.... .+.+.|+...   -++|.|++..- +..|+- ..++ +    ....+++.......-...|. -++
T Consensus         2 ~vsviip~~n~~~-~l~~~L~sl~~q~~~~~eiivVdd-~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n   79 (196)
T cd02520           2 GVSILKPLCGVDP-NLYENLESFFQQDYPKYEILFCVQ-DEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLI   79 (196)
T ss_pred             CeEEEEecCCCCc-cHHHHHHHHHhccCCCeEEEEEeC-CCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHH
Confidence            3457778776655 3556665442   25688888754 444442 1111 1    11123222111110010110 010


Q ss_pred             -cccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeeccceecceeccCCCCCCCCCC
Q 021847           85 -PDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNSTA  163 (306)
Q Consensus        85 -Pdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~~  163 (306)
                       -=-.+.+|||++.|.|..++...+.++++.+.       +|..+--.+.                       |      
T Consensus        80 ~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~-------~~~~~~v~~~-----------------------~------  123 (196)
T cd02520          80 KGYEEARYDILVISDSDISVPPDYLRRMVAPLM-------DPGVGLVTCL-----------------------C------  123 (196)
T ss_pred             HHHHhCCCCEEEEECCCceEChhHHHHHHHHhh-------CCCCCeEEee-----------------------c------
Confidence             00125799999999999887777777765542       2322211000                       0      


Q ss_pred             CCCcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEc
Q 021847          164 PPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHY  226 (306)
Q Consensus       164 ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~  226 (306)
                        ++    ..+=+|+|++++-+-.+-.  ...-.+=|+.+...+. ..+.+|..++.. ++|.
T Consensus       124 --~~----g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~-~~G~~i~~~~~~-~~~~  176 (196)
T cd02520         124 --AF----GKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIW-RLGYRVVLSPYV-VMQP  176 (196)
T ss_pred             --cc----CceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHH-HcCCeEEEcchh-eecc
Confidence              01    1234788999976543311  1122356777765553 245789888774 5555

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=86.43  E-value=1.6  Score=38.29  Aligned_cols=175  Identities=17%  Similarity=0.255  Sum_probs=89.5

Q ss_pred             CCCCCCCCCCCCCCeeEEEEecccc--cccHHHHhhhccCCCceEEEEeecCccCccccccccCceeEEEeeccchhhhh
Q 021847            2 RPLWGFPKSDNSSFSLFAIAAGIKQ--SDLVDKMVTKFLSSNFSVMLFHYDGVVDQWKTFEWCDRVIHVSAANQTKWWFA   79 (306)
Q Consensus         2 r~lwg~~~~~~~~k~Lv~~~VG~kq--k~~v~~~v~kf~~~~Fdv~LfhYdg~~d~w~~~ews~~aIhv~~~~qtKww~a   79 (306)
                      |.-||++..-...+.-+.+=+|...  -..++..|.+-....=||+++.+.   |.+..+.  .+.+.     .-+| ..
T Consensus         7 R~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~---D~y~nlt--~K~~~-----~~~w-~~   75 (195)
T PF01762_consen    7 RETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFV---DSYRNLT--LKTLA-----GLKW-AS   75 (195)
T ss_pred             HHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecc---cccchhh--HHHHH-----HHHH-HH
Confidence            5668877765556666777778776  334566565532223378776552   3333321  11111     1122 22


Q ss_pred             ccccCcccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeeccce--ecceeccCCCC
Q 021847           80 KRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSEVHHQITARSQRSI--VHRRTYKPGLC  157 (306)
Q Consensus        80 kRflhPdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~~sh~iT~r~~~~~--vhr~~~~~~~C  157 (306)
                      +. .     ..++||+..|||+-|   ++.++++..++.-.+...+.+..  +.....-..|.+.++  +....|     
T Consensus        76 ~~-c-----~~~~~v~k~DDD~~v---n~~~l~~~L~~~~~~~~~~~~~g--~~~~~~~~~r~~~~kw~v~~~~y-----  139 (195)
T PF01762_consen   76 KH-C-----PNAKYVLKVDDDVFV---NPDRLVSFLKSLKQDPSKNSIYG--GCIKNGPPIRDPSSKWYVSEEEY-----  139 (195)
T ss_pred             hh-C-----CchhheeecCcEEEE---ehHHhhhhhhhcccCcccccccc--ccccCCccccccccCceeeeeec-----
Confidence            21 2     358999999999988   55666666666533333333222  111121223333322  111111     


Q ss_pred             CCCCCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceehhh-HhhhhhhcC
Q 021847          158 DKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLD-MQLGYCAQG  209 (306)
Q Consensus       158 ~~~~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD-~~~~~c~~~  209 (306)
                       ....-||   |....+-++|+++.+.+....++-  .-+-+| -.+|.|++.
T Consensus       140 -~~~~yP~---y~~G~~yvls~~~v~~i~~~~~~~--~~~~~eDv~iGi~~~~  186 (195)
T PF01762_consen  140 -PDDYYPP---YCSGGGYVLSSDVVKRIYKASSHT--PFFPLEDVFIGILAEK  186 (195)
T ss_pred             -ccccCCC---cCCCCeEEecHHHHHHHHHHhhcC--CCCCchHHHHHHHHHH
Confidence             1112233   334678899999998765443322  233354 444999864

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=86.16  E-value=1.5  Score=37.84  Aligned_cols=39  Identities=13%  Similarity=0.006  Sum_probs=32.8

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCc
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPAL  127 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPAL  127 (306)
                      +.+|||.+.|+|..++...++++++..++.+..+.++..
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~  118 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPM  118 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecce
Confidence            379999999999999999999999888887777766543

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=84.92  E-value=0.54  Score=39.67  Aligned_cols=116  Identities=10%  Similarity=-0.028  Sum_probs=62.6

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHh-CCcccCCCcCCC--CCceeeeeeeeeccceecceecc--CCCCCCCCCC
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSE-GLEISQPALDPA--KSEVHHQITARSQRSIVHRRTYK--PGLCDKNSTA  163 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~-gLeIsQPALd~~--~S~~sh~iT~r~~~~~vhr~~~~--~~~C~~~~~~  163 (306)
                      +.+|||++.|+|..++.-.+.++++.+.++ +..|..+....-  .+...+...  .+.  ..+...+  ...|.     
T Consensus        79 a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~-----  149 (201)
T cd04195          79 CTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR--LPT--SHDDILKFARRRSP-----  149 (201)
T ss_pred             cCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc--CCC--CHHHHHHHhccCCC-----
Confidence            579999999999999988899988887654 566655543210  111111111  000  0000000  11111     


Q ss_pred             CCCcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEE
Q 021847          164 PPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVV  224 (306)
Q Consensus       164 ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~  224 (306)
                            +..++=+|+|+++..+-.+-..    -.+-|+.+...+- ..+.++..+....+.
T Consensus       150 ------~~~~~~~~rr~~~~~~g~~~~~----~~~eD~~~~~r~~-~~g~~~~~~~~~~~~  199 (201)
T cd04195         150 ------FNHPTVMFRKSKVLAVGGYQDL----PLVEDYALWARML-ANGARFANLPEILVK  199 (201)
T ss_pred             ------CCChHHhhhHHHHHHcCCcCCC----CCchHHHHHHHHH-HcCCceecccHHHhh
Confidence                  1112236889999876554322    4577877764442 234678777654443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=81.03  E-value=0.66  Score=39.72  Aligned_cols=35  Identities=17%  Similarity=0.133  Sum_probs=26.3

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHhCCccc
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEIS  123 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIs  123 (306)
                      +..|||++.|+|..++...+.++++.+...+..+.
T Consensus        77 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v  111 (224)
T cd06442          77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLV  111 (224)
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEE
Confidence            55799999999988877777788777655555543

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=80.39  E-value=2.4  Score=37.84  Aligned_cols=109  Identities=14%  Similarity=0.109  Sum_probs=59.8

Q ss_pred             CCCCeeEEEEecccccccHHHHhh---hcc--CCCceEEEEeecCccCcccc-cc-c----cCceeEEEee--ccchhhh
Q 021847           12 NSSFSLFAIAAGIKQSDLVDKMVT---KFL--SSNFSVMLFHYDGVVDQWKT-FE-W----CDRVIHVSAA--NQTKWWF   78 (306)
Q Consensus        12 ~~~k~Lv~~~VG~kqk~~v~~~v~---kf~--~~~Fdv~LfhYdg~~d~w~~-~e-w----s~~aIhv~~~--~qtKww~   78 (306)
                      ..++.-|++++ ++....+...++   +..  ..+|.|+++ =||..|+=.+ ++ +    ....+.+...  ++.+---
T Consensus         7 ~~~~vsVvIp~-yne~~~l~~~l~~l~~~~~~~~~~eiivv-DdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a   84 (243)
T PLN02726          7 GAMKYSIIVPT-YNERLNIALIVYLIFKALQDVKDFEIIVV-DDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTA   84 (243)
T ss_pred             CCceEEEEEcc-CCchhhHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHH
Confidence            45677888887 444444444332   211  136777777 4666554111 00 1    1112333222  2222110


Q ss_pred             hccccCcccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCC
Q 021847           79 AKRFLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQP  125 (306)
Q Consensus        79 akRflhPdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQP  125 (306)
                      ...=+   -.+..|||++.|.|...+...+.++++.+.+.+..+...
T Consensus        85 ~n~g~---~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g  128 (243)
T PLN02726         85 YIHGL---KHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTG  128 (243)
T ss_pred             HHHHH---HHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEE
Confidence            00000   135789999999999999888999999887777666544

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=80.23  E-value=2.5  Score=34.77  Aligned_cols=36  Identities=11%  Similarity=-0.045  Sum_probs=26.7

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHH-hCCcccC
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKS-EGLEISQ  124 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~-~gLeIsQ  124 (306)
                      +.+|||++.|+|..++...+.++++.+.+ .+..+..
T Consensus        74 a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~  110 (202)
T cd06433          74 ATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVY  110 (202)
T ss_pred             cCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEE
Confidence            46899999999999999888888844433 3444443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	306
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 5e-08
 Identities = 45/309 (14%), Positives = 82/309 (26%), Gaps = 82/309 (26%)

Query: 3   PLWGFPKSDNSSFSLFAIAAGIKQSDLVDKMVTK--FLSSNFSVMLFHYDGVVDQWKTFE 60
                   +    SL       +  DL  +++T      S  +  +       D WK   
Sbjct: 294 HSMTLTPDE--VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351

Query: 61  WCDRVIHVSAANQTKWWFAKRFLHPDIVAEYSY----IF-------------LWDEDLGV 103
            CD++  +  +       +   L P    +  +    +F             +W +   V
Sbjct: 352 -CDKLTTIIES-------SLNVLEPAEYRKM-FDRLSVFPPSAHIPTILLSLIWFD---V 399

Query: 104 EDFNPQKYVSIVKSEGLEISQPALDPAKSEVHH-QITARSQRSI---VHRR---TYKPGL 156
              +    V+ +    L   QP    +   +    +  + +      +HR     Y    
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQP--KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 157 C-DKNSTAPPCT-GWI-----------EM--MAPVFSRAAWRCVWYL----IQNDLIH-- 195
             D +   PP    +            E      +F         +L    ++  + H  
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM------VFLDFRFLEQKIRHDS 511

Query: 196 -AWG---------LDMQL--GYCAQGDRTKNVGVVDAEYVVHYGRPTLGVPEKKTDLLEI 243
            AW            ++    Y    D      V      +      L +  K TDLL I
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRI 570

Query: 244 GFSPETENI 252
               E E I
Sbjct: 571 ALMAEDEAI 579

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	306
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	92.02
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	84.3

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=92.02  E-value=0.41  Score=40.43  Aligned_cols=119  Identities=13%  Similarity=-0.013  Sum_probs=67.4

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHh-CCcccCCCc-----CCCCCceeeeeeeeeccceecceeccCCCCCCCCC
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSE-GLEISQPAL-----DPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNST  162 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~-gLeIsQPAL-----d~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~  162 (306)
                      +..|||++.|+|..++...+.++++.+.++ +..+..+..     +.+ +...+.. .+ +...+.     .        
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~-----~--------  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-VR-PAAQVT-----W--------  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-EE-CCCSCB-----S--------
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-cC-chHHHH-----H--------
Confidence            578999999999999999999999999876 666655543     222 1111110 00 100000     0        


Q ss_pred             CCCCcceEEEeccccchhHHHHhh-hh---hcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEcc
Q 021847          163 APPCTGWIEMMAPVFSRAAWRCVW-YL---IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYG  227 (306)
Q Consensus       163 ~ppct~fVEiMaPVFSR~Awrcvw-~~---iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~g  227 (306)
                        ....++-..+=+|+|++++-+- .|   ...+.....+-|+.+...+.. . .++..++...+.|+.
T Consensus       151 --~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~-g~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 --NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-F-YPFYPLDEELDLNYI  215 (255)
T ss_dssp             --CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-T-CCBEEEEEEEEEEEE
T ss_pred             --hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-h-CCEEEecCcEEEEEE
Confidence              0111222234578999997664 34   111111234567666544422 2 369999998888873

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=84.30  E-value=1.6  Score=41.14  Aligned_cols=39  Identities=10%  Similarity=0.066  Sum_probs=33.3

Q ss_pred             cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCc
Q 021847           89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPAL  127 (306)
Q Consensus        89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPAL  127 (306)
                      +..|||+|.|+|..++.--+.++++.+++..-.+.-|.+
T Consensus       113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~  151 (472)
T 1xhb_A          113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII  151 (472)
T ss_dssp             CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred             ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeee
Confidence            568999999999999999999999999887655555554

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	306
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	86.02

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.02  E-value=0.44  Score=40.25  Aligned_cols=140  Identities=13%  Similarity=0.071  Sum_probs=72.5

Q ss_pred             ccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCCCCc-eee----eeeeeec--cceecceecc---CCCC
Q 021847           88 VAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPAKSE-VHH----QITARSQ--RSIVHRRTYK---PGLC  157 (306)
Q Consensus        88 v~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~~S~-~sh----~iT~r~~--~~~vhr~~~~---~~~C  157 (306)
                      .+..|||+|.|+|..++.-.++++++.+.+..-.+..|.++.-... ..+    ..+.-.-  ....+.....   ....
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            3678999999999999999999999999998877777764321000 000    0000000  0000000000   0000


Q ss_pred             CCCCCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceeh---hhHhhhhhhcCCCCCcEEEEeeeeEEEccccCCC
Q 021847          158 DKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWG---LDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPTLG  232 (306)
Q Consensus       158 ~~~~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWG---LD~~~~~c~~~~~~~kiGVVDa~~V~H~g~Ptlg  232 (306)
                      ....+.+..+.++-.-+=.++|++|.-+=.|-. . ...||   +|+.+.....   +.+|..+-...|.|..+-..+
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe-~-~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~~~~~~  257 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDA-G-MDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKATP  257 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCT-T-SCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC-----
T ss_pred             ccccccccccceecceeeeeeHHHHHHhCCCCC-C-CcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeCCCCCC
Confidence            011112222223322233468999986533322 2 23443   5566655543   468999999999998544443